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1 CARBOHYDRATES Introduction Carbohydrates Are a Group Of
CARBOHYDRATES Introduction Carbohydrates are a group of compounds which constitute the basic components of animal and plant tissues. The basic chemical unit represented by CnH2nOn, is used by living cells to make complex primary and secondary metabolites in tissues. Carbohydrates serve as: i. Sources of energy, e.g. sugars ii. Stores of energy, e.g. starch and glycogen iii. Constituents of shells e.g. chitin iv. Plant supportive tissue, e.g. cellulose The hierarchical complexity can be summarized as follows: Monosaccharides Disaccharides Trisaccharides, etc. Oligosaccharides Polysaccharides The word “saccharide” was derived from the Greek word sacharr which means sugar. 1 Create PDF files without this message by purchasing novaPDF printer (http://www.novapdf.com) Chemical Classification of Carbohydrates Monosaccharides The monosaccharides are known as the simple sugars. The smallest simple sugar is D-Glyceraldehyde: 2 Create PDF files without this message by purchasing novaPDF printer (http://www.novapdf.com) This is a 3 carbon hydroxyladehyde and is called an aldose or a triose. The isomer with a ketone group on the second carbon is termed a ketose. Thus the simple monosaccharides for a congeneric series of aldoses or ketoses with increasing molecular weight. Triose has 3 carbon atoms Tetrose has 4 carbon atoms Pentose has 5 carbon atoms Hexose has six carbon atoms Heptose has 7 carbon atoms Octose has 8 carbon atoms Nonose has 9 carbon atoms Decose has 10 carbon atoms Etc. Thus an aldose is an aldehyde with a terminal –CHO -
Biochemistry Entry of Fructose and Galactose
Paper : 04 Metabolism of carbohydrates Module : 06 Entry of Fructose and Galactose Dr. Vijaya Khader Dr. MC Varadaraj Principal Investigator Dr.S.K.Khare,Professor IIT Delhi. Paper Coordinator Dr. Ramesh Kothari,Professor UGC-CAS Department of Biosciences Saurashtra University, Rajkot-5, Gujarat-INDIA Dr. S. P. Singh, Professor Content Reviewer UGC-CAS Department of Biosciences Saurashtra University, Rajkot-5, Gujarat-INDIA Dr. Charmy Kothari, Assistant Professor Content Writer Department of Biotechnology Christ College, Affiliated to Saurashtra University, Rajkot-5, Gujarat-INDIA 1 Metabolism of Carbohydrates Biochemistry Entry of Fructose and Galactose Description of Module Subject Name Biochemistry Paper Name 04 Metabolism of Carbohydrates Module Name/Title 06 Entry of Fructose and Galactose 2 Metabolism of Carbohydrates Biochemistry Entry of Fructose and Galactose METABOLISM OF FRUCTOSE Objectives 1. To study the major pathway of fructose metabolism 2. To study specialized pathways of fructose metabolism 3. To study metabolism of galactose 4. To study disorders of galactose metabolism 3 Metabolism of Carbohydrates Biochemistry Entry of Fructose and Galactose Introduction Sucrose disaccharide contains glucose and fructose as monomers. Sucrose can be utilized as a major source of energy. Sucrose includes sugar beets, sugar cane, sorghum, maple sugar pineapple, ripe fruits and honey Corn syrup is recognized as high fructose corn syrup which gives the impression that it is very rich in fructose content but the difference between the fructose content in sucrose and high fructose corn syrup is only 5-10%. HFCS is rich in fructose because the sucrose extracted from the corn syrup is treated with the enzyme that converts some glucose in fructose which makes it more sweet. -
Properties and Kinetic Analysis of UDP-Glucose Dehydrogenase from Group a Streptococci IRREVERSIBLE INHIBITION by UDP-CHLOROACETOL*
THE JOURNAL OF BIOLOGICAL CHEMISTRY Vol. 272, No. 6, Issue of February 7, pp. 3416–3422, 1997 © 1997 by The American Society for Biochemistry and Molecular Biology, Inc. Printed in U.S.A. Properties and Kinetic Analysis of UDP-glucose Dehydrogenase from Group A Streptococci IRREVERSIBLE INHIBITION BY UDP-CHLOROACETOL* (Received for publication, September 19, 1996, and in revised form, November 6, 1996) Robert E. Campbell‡§, Rafael F. Sala‡, Ivo van de Rijn¶, and Martin E. Tanner‡i From the ‡Department of Chemistry, University of British Columbia, Vancouver, British Columbia V6T 1Z1, Canada and ¶Wake Forest University Medical Center, Winston-Salem, North Carolina 27157 UDP-glucuronic acid is used by many pathogenic bac- the capsule enables the bacteria to evade the host’s immune teria in the construction of an antiphagocytic capsule system (7, 8). Group A and C streptococci are mammalian that is required for virulence. The enzyme UDP-glucose pathogens that use UDPGDH in the synthesis of a capsule dehydrogenase catalyzes the NAD1-dependent 2-fold ox- composed of hyaluronic acid (a polysaccharide consisting of idation of UDP-glucose and provides a source of the alternating glucuronic acid and N-acetylglucosamine residues) acid. In the present study the recombinant dehydrogen- (9, 10). Many of the known strains of Streptococcus pneumoniae ase from group A streptococci has been purified and also use UDP-glucuronic acid in the construction of their po- found to be active as a monomer. The enzyme contains lysaccharide capsule (11), and it has recently been shown that no chromophoric cofactors, and its activity is unaffected UDPGDH is required for capsule production in S. -
Xj 128 IUMP Glucose Substance Will Be Provisionally Referred to As UDPX (Fig
426 Studies on Uridine-Diphosphate-Glucose By A. C. PALADINI AND L. F. LELOIR Instituto de Inve8tigacione&s Bioquimicas, Fundacion Campomar, J. Alvarez 1719, Buenos Aires, Argentina (Received 18 September 1951) A previous paper (Caputto, Leloir, Cardini & found that the substance supposed to be uridine-2'- Paladini, 1950) reported the isolation of the co- phosphate was uridine-5'-phosphate. The hydrolysis enzyme of the galactose -1- phosphate --glucose - 1 - product of UDPG has now been compared with a phosphate transformation, and presented a tenta- synthetic specimen of uridine-5'-phosphate. Both tive structure for the substance. This paper deals substances were found to be identical as judged by with: (a) studies by paper chromatography of puri- chromatographic behaviour (Fig. 1) and by the rate fied preparations of uridine-diphosphate-glucose (UDPG); (b) the identification of uridine-5'-phos- 12A UDPG phate as a product of hydrolysis; (c) studies on the ~~~~~~~~~~~~~(a) alkaline degradation of UDPG, and (d) a substance similar to UDPG which will be referred to as UDPX. UMP Adenosine UDPG preparation8 8tudied by chromatography. 0 UjDPX Paper chromatography with appropriate solvents 0 has shown that some of the purest preparations of UDP UDPG which had been obtained previously contain two other compounds, uridinemonophosphate 0 4 (UMP) and a substance which appears to have the same constitution as UDPG except that it contains an unidentified component instead of glucose. This Xj 128 IUMP Glucose substance will be provisionally referred to as UDPX (Fig. la). The three components have been tested for co- enzymic activity in the galactose-1-phosphate-- 0-4 -J UDPX glucose-l-phosphate transformation, and it has been confirmed that UDPG is the active substance. -
Ii- Carbohydrates of Biological Importance
Carbohydrates of Biological Importance 9 II- CARBOHYDRATES OF BIOLOGICAL IMPORTANCE ILOs: By the end of the course, the student should be able to: 1. Define carbohydrates and list their classification. 2. Recognize the structure and functions of monosaccharides. 3. Identify the various chemical and physical properties that distinguish monosaccharides. 4. List the important monosaccharides and their derivatives and point out their importance. 5. List the important disaccharides, recognize their structure and mention their importance. 6. Define glycosides and mention biologically important examples. 7. State examples of homopolysaccharides and describe their structure and functions. 8. Classify glycosaminoglycans, mention their constituents and their biological importance. 9. Define proteoglycans and point out their functions. 10. Differentiate between glycoproteins and proteoglycans. CONTENTS: I. Chemical Nature of Carbohydrates II. Biomedical importance of Carbohydrates III. Monosaccharides - Classification - Forms of Isomerism of monosaccharides. - Importance of monosaccharides. - Monosaccharides derivatives. IV. Disaccharides - Reducing disaccharides. - Non- Reducing disaccharides V. Oligosaccarides. VI. Polysaccarides - Homopolysaccharides - Heteropolysaccharides - Carbohydrates of Biological Importance 10 CARBOHYDRATES OF BIOLOGICAL IMPORTANCE Chemical Nature of Carbohydrates Carbohydrates are polyhydroxyalcohols with an aldehyde or keto group. They are represented with general formulae Cn(H2O)n and hence called hydrates of carbons. -
Structure Elucidations of Bacterial Polysaccharides Using Nmr Spectroscopy and Bioinformatics
! "#! #"$"" %& '( ) ' *#+,$ - $. / $0 1 / $ / $ 2%3 ' / $ . / $ . 2%3 ' - $ . / 4,' $ 5 / / 4,$. 43' / $ / $ . / 1 / $. 6 $. 2%3 / $5 ' / +7' 87$ 5 1 '/ , / $. / ' / 1 $ ! " ! " "#! 9:: $$ : ; < 99 9 9 #=+>+! 5,28!>8#!+=88? > 5,28!>8#!+=88?7? # $ % '#"+8# STRUCTURE ELUCIDATIONS OF BACTERIAL POLYSACCHARIDES USING NMR SPECTROSCOPY AND BIOINFORMATICS Jonas Ståhle Structure Elucidations of Bacterial Polysaccharides using NMR Spectroscopy and Bioinformatics Jonas Ståhle ©Jonas Ståhle, Stockholm University 2017 ISBN print 978-91-7649-952-8 ISBN PDF 978-91-7649-953-5 Cover Picture: kolhydratskurbits Printed by Universitetsservice US-AB, Stockholm 2017 Distributor: Department of Organic Chemistry ӏ್峯峫岾峇 ෫್峯峫岾峇 ઉ峘峯Ո峛ॷ峂್峯峫岾峙 峗岸島屺峿峯峎 ཋ峜峗岼 ݀峄峓ᛊ岣峇 岱峑峯峄峇岸್峼島峐峓峽峸 ݣ࣑ୖٸ Abstract Carbohydrates are ubiquitous components in nature involved in a range of tasks. They cover every cell and contribute both structural stability as well as identity. Lipopolysaccharides are the outermost exposed -
Structures and Characteristics of Carbohydrates in Diets Fed to Pigs: a Review Diego M
Navarro et al. Journal of Animal Science and Biotechnology (2019) 10:39 https://doi.org/10.1186/s40104-019-0345-6 REVIEW Open Access Structures and characteristics of carbohydrates in diets fed to pigs: a review Diego M. D. L. Navarro1, Jerubella J. Abelilla1 and Hans H. Stein1,2* Abstract The current paper reviews the content and variation of fiber fractions in feed ingredients commonly used in swine diets. Carbohydrates serve as the main source of energy in diets fed to pigs. Carbohydrates may be classified according to their degree of polymerization: monosaccharides, disaccharides, oligosaccharides, and polysaccharides. Digestible carbohydrates include sugars, digestible starch, and glycogen that may be digested by enzymes secreted in the gastrointestinal tract of the pig. Non-digestible carbohydrates, also known as fiber, may be fermented by microbial populations along the gastrointestinal tract to synthesize short-chain fatty acids that may be absorbed and metabolized by the pig. These non-digestible carbohydrates include two disaccharides, oligosaccharides, resistant starch, and non-starch polysaccharides. The concentration and structure of non-digestible carbohydrates in diets fed to pigs depend on the type of feed ingredients that are included in the mixed diet. Cellulose, arabinoxylans, and mixed linked β-(1,3) (1,4)-D-glucans are the main cell wall polysaccharides in cereal grains, but vary in proportion and structure depending on the grain and tissue within the grain. Cell walls of oilseeds, oilseed meals, and pulse crops contain cellulose, pectic polysaccharides, lignin, and xyloglucans. Pulse crops and legumes also contain significant quantities of galacto-oligosaccharides including raffinose, stachyose, and verbascose. -
The Effects of Glucose, N-Acetylglucosamine, Glyceraldehyde and Other Sugars on Insulin Release in Vivo S
Diabetologia 11,279-284 (1975) by Springer-Verlag 1975 The Effects of Glucose, N-Acetylglucosamine, Glyceraldehyde and Other Sugars on Insulin Release in Vivo S. J.H. Ashcroft and J.R. Crossley Department of Biochemistry, University of Bristol, England Received: February 18, 1975, and in revised form: April 28, 1975 Summary. The specificity for carbohydrates of insulin secretory duced hyperglycaemia, but peak insulin concentrations occurred responses in vivo was studied. Test sugars were injected via a left before any change in plasma glucose concentration. No evidence femoral vein cannula into conscious rats. Blood samples collected was obtained for a stimulatory effect of galactose on insulinrelease. over the ensuing 60 min via a left femoral arterial cannula were Infusion for 60 rain of N-acetylglucosarnine produced a sustained assayed for plasma insulin and glucose, and, in some experiments, elevated plasma insulin concentration and significant hypogly- for N-acetyl glucosamine. Whereas L-glucose or saline produced no caemia. The present in vivo results agree with previous in vitro significant changes in plasma insulin or glucose concentrations, observations, and could indicate a role for sugars other than glucose D-glucose, N-acetylglucosamine, D-glucosamine, fructose, D-glyc- in the regulation of insulin release. eraldehyde and DL-glyceraldehyde were potent secretagogues. Simultaneous injection of mannoheptulose abolished the insulin- Key words: N-acetylglucosamine, insulin release, glyceraldehy- otropic action of glucose and N-acetylglucosamine, but not of DL- de, glucose, glucosamine, fructose, galactose, mannoheptulose, glu- glyceraldehyde. Fructose, glucosamine, and DL-glyceraldehyde in- coreceptor. Detailed studies of the specificity of the insulin se- been conclusively established. Strong evidence for the cretory response to sugars have been performed with involvement of a metabolite has been provided by the mouse and rat islets of Langerhans in vitro [1, 2]. -
(12) United States Patent (10) Patent No.: US 9,012,411 B2 Jacob (45) Date of Patent: Apr
USOO90 12411 B2 (12) United States Patent (10) Patent No.: US 9,012,411 B2 Jacob (45) Date of Patent: Apr. 21, 2015 (54) FORMULATIONS FROM DERIVATIVES OF 7,682,636 B2 3/2010 Babish et al. 7,736,679 B2 6/2010 Antony CURCUMIN, PACLITAXEL, AND ASPIRIN 2003/O147979 A1 8, 2003 Mae et al. 2003/O153512 A1 8/2003 Hergenhahn et al. (75) Inventor: James N. Jacob, Saunderstown, RI (US) 2005, OOO8682 A1 1/2005 Tramontana 2005, 0181036 A1 8/2005 Aggarwal et al. (73) Assignee: Organomed Corporation, Coventry, RI 2005/0208157 A1 9, 2005 Navarro et al. (US) 2005/0215487 A1* 9, 2005 Holicket al. ................... 514, 23 2005/0267221 A1 12/2005 Wellen 2006, OO67998 A1 3/2006 Kurzrock et al. (*) Notice: Subject to any disclaimer, the term of this 2006/0210656 A1 9/2006 Aggarwal patent is extended or adjusted under 35 2006/02284.03 A1 10, 2006 Zimmerman U.S.C. 154(b) by 58 days. 2007/0060644 A1 3/2007 Vander Jagt et al. 2007. O148263 A1 6/2007 Antony (21) Appl. No.: 13/537,814 2008/O193573 A1 8, 2008 Gow et al. 2009, O104294 A1 4/2009 Wenk et al. 2009/O131373 A1 5/2009 Giori et al. (22) Filed: Jun. 29, 2012 2009,0280199 A1 11/2009 Russell 2009, 0291 102 A1 11/2009 Fortin (65) Prior Publication Data 2010.0048901 A1 2/2010 Takahashi et al. US 2013/OO29922 A1 Jan. 31, 2013 2010, 0196496 A1 8, 2010 Fortin FOREIGN PATENT DOCUMENTS Related U.S. Application Data CN 1739509 A 3, 2006 (63) Continuation-in-part of application No. -
UDP-Galactose 4′-Epimerase from the Liver fluke, Fasciola Hepatica: Biochemical Characterization of the Enzyme and Identification of Inhibitors
463 UDP-galactose 4′-epimerase from the liver fluke, Fasciola hepatica: biochemical characterization of the enzyme and identification of inhibitors VERONIKA L. ZINSSER1, STEFFEN LINDERT2, SAMANTHA BANFORD1, ELIZABETH M. HOEY1, ALAN TRUDGETT1,3 and DAVID J. TIMSON1,3* 1 School of Biological Sciences, Queen’s University Belfast, Medical Biology Centre, 97 Lisburn Road, Belfast BT9 7BL, UK 2 Department of Pharmacology, Center for Theoretical Biological Physics, University of California San Diego, La Jolla, CA 92093, USA 3 Institute for Global Food Security, Queen’s University Belfast, 18-30 Malone Road, Belfast BT9 5BN, UK (Received 12 June 2014; accepted 19 July 2014; first published online 15 August 2014) SUMMARY The Leloir pathway enzyme uridine diphosphate (UDP)-galactose 4′-epimerase from the common liver fluke Fasciola hepatica (FhGALE) was identified and characterized. The enzyme can be expressed in, and purified from, Escherichia coli. The recombinant enzyme is active: the Km (470 μM) is higher than the corresponding human enzyme (HsGALE), whereas −1 + the kcat (2·3 s ) is substantially lower. FhGALE binds NAD and has shown to be dimeric by analytical gel filtration. Like the human and yeast GALEs, FhGALE is stabilized by the substrate UDP-galactose. Molecular modelling predicted that FhGALE adopts a similar overall fold to HsGALE and that tyrosine 155 is likely to be the catalytically critical residue in the active site. In silico screening of the National Cancer Institute Developmental Therapeutics Program library identified 40 potential inhibitors of FhGALE which were tested in vitro. Of these, 6 showed concentration-dependent inhibition of FhGALE, some with nanomolar IC50 values. -
Solutions (PDF)
Solutions for Practice Problems for Biochemistry, 6: Glycolysis, Respiration and Fermentation Question 1 ADP ATP Glycolysis can be summarized as: glucose pyruvate + NAD NADH a) In a yeast cell, what is the fate of the carbon in pyruvate under anaerobic conditions? ethanol b) In a yeast cell, what is the fate of the carbon in pyruvate under aerobic conditions? CO2 c) In step 7 (see attached diaragm) of glycolysis 1,3-Bisphosphoglycerate (BPG) is converted into 3- Phosphoglycerate (3PG). Which of these molecules, BPG or 3PG would you expect is at a higher energy level? Explain your answer. BPG is at a higher energy level than 3PG. You can infer this because BPG has two phosphate groups as compare to 3PG, which has one phosphate group. Also, the conversion of BPG into 3PG drives the synthesis of ATP. d) The enzyme triose phosphate isomerase, catalyzes step 5. In this step Dihydroxyacetone phosphate is converted into Glyceraldehyde-3-phoshate (DAP G3P). Glyceraldehyde-3-phoshate (G3P) is immediately used in step 6. Dihydroxyacetone phosphate must be converted to Glyceraldehyde-3-phoshate (G3P) before it can continue through glycolysis. Cells lacking triose phosphate isomerase can’t convert (DAP G3P). These cells can remain alive but only under aerobic conditions. Explain why cells lacking triose phosphate isomerase are alive only under aerobic conditions. Cells that lack triose phosphate isomerase can complete glycolysis using only G3P, but this generates only 2 ATP. In these cells under anaerobic conditions there is no net gain of ATP from glycolysis. Under aerobic conditions, the single pyruvate can be further oxidized to generate a little more ATP and the energy stored in NADH can be harvested through oxidation phosphorylation to generate even more ATP. -
Biomolecules-Carbohydrates.Pdf
Biomolecules are organic molecules produced by living organisms which consists mainly of the following elements: . These elements are non-metals which combine in various ways to form biomolecules through a covalent type of bonding. A wide range of biomolecules exist, including large molecules known as macromolecules and small molecules known as micromolecules. Biomolecules are categorized into four classes. They are polymers of repeating units of smaller molecules called monomers. Through a covalent type of Biomolecule Element Content Example Building Block bonding, these monomers Carbon, Hydrogen, create various forms of each Carbohydrate polysaccharide monosaccharide Oxygen organic molecule. Carbon, Hydrogen, Protein polypeptide amino acid Oxygen, Nitrogen, Sulfur Carbon, Hydrogen, glycerol and fatty Lipid triglyceride Oxygen acid Carbon, Hydrogen, Nucleic Acid Oxygen, Nitrogen, DNA/RNA nucleotide Phosphorous Physiological functions rely on energy can be provided by Carbohydrates Lipids are classified as are classified as composed of Triglycerides (fats & oils) Monosaccharides Carbon Phospolipids Disaccharides Hydrogen Steroids (Cholesterol) Polysaccharides Oxygen Waxes . The most abundant class of biomolecules . A chief source of energy of almost all living organisms . Originated from the French word hydrate de carbone, which means “hydrates of carbon” . Sometimes called saccharides, from the Greek word sakcharon, meaning “sugar” . The suffix –ose is used to denote the name of a saccharide . Food that are high in carbohydrates include: FRUITS SWEETS RICE BREAD AND PASTA BEANS AND POTATOES CEREAL . Contain the elements carbon, hydrogen and nitrogen . They have an C:H:O ratio of 1:2:1 based on their general formula Cn(H2O)n . Carbohydrates include sugars, starches, cellulose, and many other compounds in organisms .