Ascomyceteorg 08-02 Ascomyceteorg
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Illuminating Type Collections of Nectriaceous Fungi in Saccardo's
Persoonia 45, 2020: 221–249 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2020.45.09 Illuminating type collections of nectriaceous fungi in Saccardo’s fungarium N. Forin1, A. Vizzini 2,3,*, S. Nigris1,4, E. Ercole2, S. Voyron2,3, M. Girlanda2,3, B. Baldan1,4,* Key words Abstract Specimens of Nectria spp. and Nectriella rufofusca were obtained from the fungarium of Pier Andrea Saccardo, and investigated via a morphological and molecular approach based on MiSeq technology. ITS1 and ancient DNA ITS2 sequences were successfully obtained from 24 specimens identified as ‘Nectria’ sensu Saccardo (including Ascomycota 20 types) and from the type specimen of Nectriella rufofusca. For Nectria ambigua, N. radians and N. tjibodensis Hypocreales only the ITS1 sequence was recovered. On the basis of morphological and molecular analyses new nomenclatural Illumina combinations for Nectria albofimbriata, N. ambigua, N. ambigua var. pallens, N. granuligera, N. peziza subsp. ribosomal sequences reyesiana, N. radians, N. squamuligera, N. tjibodensis and new synonymies for N. congesta, N. flageoletiana, Sordariomycetes N. phyllostachydis, N. sordescens and N. tjibodensis var. crebrior are proposed. Furthermore, the current classifi- cation is confirmed for Nectria coronata, N. cyanostoma, N. dolichospora, N. illudens, N. leucotricha, N. mantuana, N. raripila and Nectriella rufofusca. This is the first time that these more than 100-yr-old specimens are subjected to molecular analysis, thereby providing important new DNA sequence data authentic for these names. Article info Received: 25 June 2020; Accepted: 21 September 2020; Published: 23 November 2020. INTRODUCTION to orange or brown perithecia which do not change colour in 3 % potassium hydroxide (KOH) or 100 % lactic acid (LA) Nectria, typified with N. -
59 Sarcopodium
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Universidade do Minho: RepositoriUM 59 Sarcopodium Dongyou Liu and R.R.M. Paterson contents 59.1 Introduction ..................................................................................................................................................................... 485 59.1.1 Classification and Morphology ............................................................................................................................ 485 59.1.2 Clinical Features .................................................................................................................................................. 486 59.1.3 Diagnosis ............................................................................................................................................................. 486 59.2 Methods ........................................................................................................................................................................... 486 59.2.1 Sample Preparation .............................................................................................................................................. 486 59.2.2 Detection Procedures ........................................................................................................................................... 486 59.3 Conclusion ...................................................................................................................................................................... -
Download from Genbank, and the Outgroup Monilochaetes Infuscans CBS 379.77 and CBS , RNA Polymerase II Second Largest Subunit
Mycological Progress (2019) 18:1135–1154 https://doi.org/10.1007/s11557-019-01511-4 ORIGINAL ARTICLE New plectosphaerellaceous species from Dutch garden soil Alejandra Giraldo1,2 & Margarita Hernández-Restrepo1 & Pedro W. Crous1,2,3 Received: 8 April 2019 /Revised: 17 July 2019 /Accepted: 2 August 2019 # The Author(s) 2019 Abstract During 2017, the Westerdijk Fungal Biodiversity Institute (WI) and the Utrecht University Museum launched a Citizen Science project. Dutch school children collected soil samples from gardens at different localities in the Netherlands, and submitted them to the WI where they were analysed in order to find new fungal species. Around 3000 fungal isolates, including filamentous fungi and yeasts, were cultured, preserved and submitted for DNA sequencing. Through analysis of the ITS and LSU sequences from the obtained isolates, several plectosphaerellaceous fungi were identified for further study. Based on morphological characters and the combined analysis of the ITS and TEF1-α sequences, some isolates were found to represent new species in the genera Phialoparvum,i.e.Ph. maaspleinense and Ph. rietveltiae,andPlectosphaerella,i.e.Pl. hanneae and Pl. verschoorii, which are described and illustrated here. Keywords Biodiversity . Citizen Science project . Phialoparvum . Plectosphaerella . Soil-born fungi Introduction phylogenetic fungal lineages in soil-inhabiting fungi (Tedersoo et al. 2017). Soil is one of the main reservoirs of fungal species and Among Ascomycota, the family Plectosphaerellaceae commonly ranks as the most abundant source regarding (Glomerellales, Sordariomycetes) harbours important plant fungal biomass and physiological activity. Fungal diver- pathogens such as Verticillium dahliae, V. alboatrum and sity is affected by the variety of microscopic habitats and Plectosphaerella cucumerina, but also several saprobic genera microenvironments present in soils (Anderson and usually found in soil, i.e. -
Delimitation of Neonectria and Cylindrocarpon (Nectriaceae, Hypocreales, Ascomycota) and Related Genera with Cylindrocarpon-Like Anamorphs
available online at www.studiesinmycology.org StudieS in Mycology 68: 57–78. 2011. doi:10.3114/sim.2011.68.03 Delimitation of Neonectria and Cylindrocarpon (Nectriaceae, Hypocreales, Ascomycota) and related genera with Cylindrocarpon-like anamorphs P. Chaverri1*, C. Salgado1, Y. Hirooka1, 2, A.Y. Rossman2 and G.J. Samuels2 1University of Maryland, Department of Plant Sciences and Landscape Architecture, 2112 Plant Sciences Building, College Park, Maryland 20742, USA; 2United States Department of Agriculture, Agriculture Research Service, Systematic Mycology and Microbiology Laboratory, Rm. 240, B-010A, 10300 Beltsville Avenue, Beltsville, Maryland 20705, USA *Correspondence: Priscila Chaverri, [email protected] Abstract: Neonectria is a cosmopolitan genus and it is, in part, defined by its link to the anamorph genusCylindrocarpon . Neonectria has been divided into informal groups on the basis of combined morphology of anamorph and teleomorph. Previously, Cylindrocarpon was divided into four groups defined by presence or absence of microconidia and chlamydospores. Molecular phylogenetic analyses have indicated that Neonectria sensu stricto and Cylindrocarpon sensu stricto are phylogenetically congeneric. In addition, morphological and molecular data accumulated over several years have indicated that Neonectria sensu lato and Cylindrocarpon sensu lato do not form a monophyletic group and that the respective informal groups may represent distinct genera. In the present work, a multilocus analysis (act, ITS, LSU, rpb1, tef1, tub) was applied to representatives of the informal groups to determine their level of phylogenetic support as a first step towards taxonomic revision of Neonectria sensu lato. Results show five distinct highly supported clades that correspond to some extent with the informal Neonectria and Cylindrocarpon groups that are here recognised as genera: (1) N. -
Ascomyceteorg 09-01 Ascomyceteorg
Four new species of Ijuhya (Bionectriaceae) from Belgium, metropolitan France and French Guiana Christian LECHAT Abstract: Four new species of Ijuhya are described and illustrated based on material collected in Belgium, Jacques FOURNIER metropolitan France and French Guiana. The four new species described herein were sequenced and one of them was successfully cultured. They are placed in the Bionectriaceae based on ascomata not changing colour in 3% KOH or lactic acid, acremonium-like asexual morph and phylogenetic affinities of LSU sequences with five morphologically related genera of theBionectriaceae . Their placement in Ijuhya is based on mor- Ascomycete.org, 9 (1) : 11-18. phological and phylogenetic comparison with the most similar genera including Lasionectria and Lasionec- Janvier 2017 triella. An updated dichotomous key to Ijuhya is presented. Mise en ligne le 07/01/2017 Keywords: acremonium-like, Ascomycota, Hypocreales, ribosomal DNA, taxonomy. Résumé : quatre espèces nouvelles du genre Ijuhya sont décrites et illustrées d’après du matériel récolté en Belgique, France métropolitaine et Guyane française. Les quatre espèces nouvelles décrites ici ont été sé- quencées et l'une d'entre elles a pu être cultivée. Elles sont placées dans les Bionectriaceae d’après les as- comes ne changeant pas de couleur dans KOH à 3 % ou dans l’acide lactique, la forme asexuée de type acremonium et les affinités phylogénétiques des séquences LSU avec des espèces représentant cinq genres de Bionectriaceae morphologiquement proches. Leur placement dans Ijuhya est établi sur la comparaison morphologique et phylogénétique avec les genres les plus ressemblants, dont Lasionectria et Lasionectriella. Une clé dichotomique mise à jour du genre Ijuhya est proposée. -
Two New Species of <I>Lasionectria</I> (<I>Bionectriaceae, Hypocreales</I>) from Guadeloupe and Martiniq
ISSN (print) 0093-4666 © 2012. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/121.275 Volume 121, pp. 275–280 July–September 2012 Two new species of Lasionectria (Bionectriaceae, Hypocreales) from Guadeloupe and Martinique (French West Indies) Christian Lechat1* & Jacques Fournier2 1Ascofrance, 64 route de Chizé, F-79360 Villiers en Bois, France 2Las Muros, F-09420 Rimont *Correspondence to: [email protected] Abstract —Lasionectria marigotensis sp. nov. on decaying leaves of Cocos nucifera (Arecaceae) in Guadeloupe and L. martinicensis sp. nov. on dead stems of Passiflora sp. (Passifloraceae) in Martinique are described and illustrated. The acremonium-like asexual state was obtained in culture for both species. An updated key to the species of Lasionectria is provided. Key words —Ascomycota, neotropics, palm fungi, taxonomy Introduction The genusLasionectria (Sacc.) Cooke is based on the lectotype L. mantuana (Sacc.) Cooke, designated by Clements & Shear (1931). The ascomata of Lasionectria are yellow, pale orange, red-orange or dark brown, and do not obviously change colour in 3% KOH or lactic acid; thus Lasionectria belongs to the Bionectriaceae Samuels & Rossman as defined by Rossman et al. (1999). The genus is distinguished from other genera in the Bionectriaceae by the ascomatal wall over 20 µm thick and composed of thick-walled cells with a small lumen and hairs scattered over the ascomatal surface. Hairs may be stiff or flexuous, solitary or fasciculate but do not form a distinct apical crown. The most similar genus is Ijuhya Starbäck, which differs mainly in having ascomata with a wall less than 20 µm thick and typically with a discoid flattened apex fringed by triangular fascicles of hairs, or rarely without hairs (Rossman et al. -
Mycosphere Essays 2. Myrothecium
Mycosphere 7 (1): 64–80 (2016) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/7/1/7 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Essays 2. Myrothecium Chen Y1, Ran SF1, Dai DQ2, Wang Y1, Hyde KD2, Wu YM3 and Jiang YL1 1 Department of Plant Pathology, Agricultural College of Guizhou University, Huaxi District, Guiyang City, Guizhou Province 550025, China 2 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 3 Department of Plant Pathology, Shandong Agricultural University, Taian, 271018, China Chen Y, Ran SF, Dai DQ, Wang Y, Hyde KD, Wu YM, Jiang YL 2016 – Mycosphere Essays 2. Myrothecium. Mycosphere 7(1), 64–80, Doi 10.5943/mycosphere/7/1/7 Abstract Myrothecium (family Stachybotryaceae) has a worldwide distribution. Species in this genus were previously classified based on the morphology of the asexual morph, especially characters of conidia and conidiophores. Morphology-based identification alone is imprecise as there are few characters to differentiate species within the genus and, therefore, molecular sequence data is important in identifying species. In this review we discuss the history and significance of the genus, illustrate the morphology and discuss its role as a plant pathogen and biological control agent. We illustrate the type species Myrothecium inundatum with a line diagram and M. uttaradiensis with photo plates and discuss species numbers in the genus. The genus is re-evaluated based on molecular analyses of ITS and EF1-α sequence data, as well as a combined ATP6, EF1-α, LSU, RPB1 and SSU dataset. The combined gene analysis proved more suitable for resolving the taxonomic placement of this genus. -
Fungal Planet Description Sheets: 400–468
Persoonia 36, 2016: 316– 458 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158516X692185 Fungal Planet description sheets: 400–468 P.W. Crous1,2, M.J. Wingfield3, D.M. Richardson4, J.J. Le Roux4, D. Strasberg5, J. Edwards6, F. Roets7, V. Hubka8, P.W.J. Taylor9, M. Heykoop10, M.P. Martín11, G. Moreno10, D.A. Sutton12, N.P. Wiederhold12, C.W. Barnes13, J.R. Carlavilla10, J. Gené14, A. Giraldo1,2, V. Guarnaccia1, J. Guarro14, M. Hernández-Restrepo1,2, M. Kolařík15, J.L. Manjón10, I.G. Pascoe6, E.S. Popov16, M. Sandoval-Denis14, J.H.C. Woudenberg1, K. Acharya17, A.V. Alexandrova18, P. Alvarado19, R.N. Barbosa20, I.G. Baseia21, R.A. Blanchette22, T. Boekhout3, T.I. Burgess23, J.F. Cano-Lira14, A. Čmoková8, R.A. Dimitrov24, M.Yu. Dyakov18, M. Dueñas11, A.K. Dutta17, F. Esteve- Raventós10, A.G. Fedosova16, J. Fournier25, P. Gamboa26, D.E. Gouliamova27, T. Grebenc28, M. Groenewald1, B. Hanse29, G.E.St.J. Hardy23, B.W. Held22, Ž. Jurjević30, T. Kaewgrajang31, K.P.D. Latha32, L. Lombard1, J.J. Luangsa-ard33, P. Lysková34, N. Mallátová35, P. Manimohan32, A.N. Miller36, M. Mirabolfathy37, O.V. Morozova16, M. Obodai38, N.T. Oliveira20, M.E. Ordóñez39, E.C. Otto22, S. Paloi17, S.W. Peterson40, C. Phosri41, J. Roux3, W.A. Salazar 39, A. Sánchez10, G.A. Sarria42, H.-D. Shin43, B.D.B. Silva21, G.A. Silva20, M.Th. Smith1, C.M. Souza-Motta44, A.M. Stchigel14, M.M. Stoilova-Disheva27, M.A. Sulzbacher 45, M.T. Telleria11, C. Toapanta46, J.M. Traba47, N. -
Causal Agent, Biology and Management of the Leaf and Stem
CAUSAL AGENT, BIOLOGY AND MANAGEMENT OF THE LEAF AND STEM DISEASE OF BOXWOOD {BUXUS SPP.) A Thesis Presented to The Faculty of Graduate Studies of The University of Guelph by FANG SHI In partial fulfillment of requirements for the degree of Master of Science May, 2011 ©Fang Shi, 2011 Library and Archives Bibliotheque et 1*1 Canada Archives Canada Published Heritage Direction du Branch Patrimoine de I'edition 395 Wellington Street 395, rue Wellington OttawaONK1A0N4 Ottawa ON K1A 0N4 Canada Canada Your file Votre reference ISBN: 978-0-494-82801-4 Our file Notre reference ISBN: 978-0-494-82801-4 NOTICE: AVIS: The author has granted a non L'auteur a accorde une licence non exclusive exclusive license allowing Library and permettant a la Bibliotheque et Archives Archives Canada to reproduce, Canada de reproduire, publier, archiver, publish, archive, preserve, conserve, sauvegarder, conserver, transmettre au public communicate to the public by par telecommunication ou par I'lnternet, preter, telecommunication or on the Internet, distribuer et vendre des theses partout dans le loan, distribute and sell theses monde, a des fins commerciales ou autres, sur worldwide, for commercial or non support microforme, papier, electronique et/ou commercial purposes, in microform, autres formats. paper, electronic and/or any other formats. The author retains copyright L'auteur conserve la propriete du droit d'auteur ownership and moral rights in this et des droits moraux qui protege cette these. Ni thesis. Neither the thesis nor la these ni des extraits substantiels de celle-ci substantial extracts from it may be ne doivent etre imprimes ou autrement printed or otherwise reproduced reproduits sans son autorisation. -
An Overview of the Taxonomy, Phylogeny, and Typification of Nectriaceous Fungi in Cosmospora, Acremonium, Fusarium, Stilbella, and Volutella
available online at www.studiesinmycology.org StudieS in Mycology 68: 79–113. 2011. doi:10.3114/sim.2011.68.04 An overview of the taxonomy, phylogeny, and typification of nectriaceous fungi in Cosmospora, Acremonium, Fusarium, Stilbella, and Volutella T. Gräfenhan1, 4*, H.-J. Schroers2, H.I. Nirenberg3 and K.A. Seifert1 1Eastern Cereal and Oilseed Research Centre, Biodiversity (Mycology and Botany), 960 Carling Ave., Ottawa, Ontario, K1A 0C6, Canada; 2Agricultural Institute of Slovenia, 1000 Ljubljana, Slovenia; 3Julius-Kühn-Institute, Institute for Epidemiology and Pathogen Diagnostics, Königin-Luise-Str. 19, D-14195 Berlin, Germany; 4Current address: Grain Research Laboratory, Canadian Grain Commission, 1404-303 Main Street, Winnipeg, Manitoba, R3C 3G8, Canada *Correspondence: [email protected] Abstract: A comprehensive phylogenetic reassessment of the ascomycete genus Cosmospora (Hypocreales, Nectriaceae) is undertaken using fresh isolates and historical strains, sequences of two protein encoding genes, the second largest subunit of RNA polymerase II (rpb2), and a new phylogenetic marker, the larger subunit of ATP citrate lyase (acl1). The result is an extensive revision of taxonomic concepts, typification, and nomenclatural details of many anamorph- and teleomorph-typified genera of theNectriaceae, most notably Cosmospora and Fusarium. The combined phylogenetic analysis shows that the present concept of Fusarium is not monophyletic and that the genus divides into two large groups, one basal in the family, the other terminal, separated by a large group of species classified in genera such as Calonectria, Neonectria, and Volutella. All accepted genera received high statistical support in the phylogenetic analyses. Preliminary polythetic morphological descriptions are presented for each genus, providing details of perithecia, micro- and/or macro-conidial synanamorphs, cultural characters, and ecological traits. -
Volume 121: Cover, Table of Contents, Editorial Front Matter
MYCOTAXON THE INTERNATIONAL JOURNAL OF FUNGAL TAXONOMY & NOMENCLATURE Volume 121 July–September 2012 Magnohelicospora iberica gen. & sp. nov. (Castañeda-Ruiz & al.— Fig. 2, p. 174) Rafael F. Castañeda-Ruiz, artist issn (print) 0093-4666 http://dx.doi.org/10.5248/121 issn (online) 2154-8889 myxnae 121: 1–502 (2012) Editorial Advisory Board Henning Knudsen (2008-2013), Chair Copenhagen, Denmark Seppo Huhtinen (2006-2012), Past Chair Turku, Finland Wen-Ying Zhuang (2003-2014) Beijing, China Scott A. Redhead (2010–2015) Ottawa, Ontario, Canada Sabine Huhndorf (2011–2016) Chicago, Illinois, U.S.A. Peter Buchanan (2011–2017) Auckland, New Zealand Published by Mycotaxon, Ltd. p.o. box 264, Ithaca, NY 14581-0264, USA www.mycotaxon.com & www.ingentaconnect.com/content/mtax/mt © Mycotaxon, Ltd, 2012 MYCOTAXON THE INTERNATIONAL JOURNAL OF FUNGAL TAXONOMY & NOMENCLATURE Volume 121 July–September, 2012 Editor-in-Chief Lorelei L. Norvell [email protected] Pacific Northwest Mycology Service 6720 NW Skyline Boulevard Portland, Oregon 97229-1309 USA Nomenclature Editor Shaun R. Pennycook [email protected] Manaaki Whenua Landcare Research Auckland, New Zealand Book Review Editor Else C. Vellinga [email protected] 861 Keeler Avenue Berkeley CA 94708 U.S.A. consisting of i–xii + 502 pages including figures ISSN 0093-4666 (print) http://dx.doi.org/10.5248/121.cvr ISSN 2154-8889 (online) © 2012. Mycotaxon, Ltd. iv ... Mycotaxon 121 MYCOTAXON volume one hundred twenty-one — table of contents Cover section Errata . .viii Reviewers . ix Submission procedures . x From the Editor . xi Research articles Agarics of alders I – The Alnicola badia complex Pierre-Arthur Moreau, Juliette Rochet, Enrico Bizio, Laurent Deparis, Ursula Peintner, Beatrice Senn-Irlet, Leho Tedersoo & Monique Gardes 1 A new species of Xerocomus from Southern China Ming Zhang, Tai-Hui Li, Tolgor Bau & Bin Song 23 Nomenclatural and taxonomic notes on Calvatia (Lycoperdaceae) and associated genera Johannes C. -
Hypocreales, Sordariomycetes) from Decaying Palm Leaves in Thailand
Mycosphere Baipadisphaeria gen. nov., a freshwater ascomycete (Hypocreales, Sordariomycetes) from decaying palm leaves in Thailand Pinruan U1, Rungjindamai N2, Sakayaroj J2, Lumyong S1, Hyde KD3 and Jones EBG2* 1Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand 2BIOTEC Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology, NSTDA, 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand Pinruan U, Rungjindamai N, Sakayaroj J, Lumyong S, Hyde KD, Jones EBG 2010 – Baipadisphaeria gen. nov., a freshwater ascomycete (Hypocreales, Sordariomycetes) from decaying palm leaves in Thailand. Mycosphere 1, 53–63. Baipadisphaeria spathulospora gen. et sp. nov., a freshwater ascomycete is characterized by black immersed ascomata, unbranched, septate paraphyses, unitunicate, clavate to ovoid asci, lacking an apical structure, and fusiform to almost cylindrical, straight or curved, hyaline to pale brown, unicellular, and smooth-walled ascospores. No anamorph was observed. The species is described from submerged decaying leaves of the peat swamp palm Licuala longicalycata. Phylogenetic analyses based on combined small and large subunit ribosomal DNA sequences showed that it belongs in Nectriaceae (Hypocreales, Hypocreomycetidae, Ascomycota). Baipadisphaeria spathulospora constitutes a sister taxon with weak support to Leuconectria clusiae in all analyses. Based