FEZ1) in PERIPHERAL BLOOD REVEALS DIFFERENCES in GENE EXPRESSION in PATIENTS with SCHIZOPHRENIA Vachev TI1,2, Stoyanova VK2,*, Ivanov HY2, Minkov IN1, Popov NT3

Total Page:16

File Type:pdf, Size:1020Kb

FEZ1) in PERIPHERAL BLOOD REVEALS DIFFERENCES in GENE EXPRESSION in PATIENTS with SCHIZOPHRENIA Vachev TI1,2, Stoyanova VK2,*, Ivanov HY2, Minkov IN1, Popov NT3 18 (1), 2015 l 31-38 DOI: 10.1515/bjmg-2015-0003 ORIGINAL ARTICLE INVESTIGATION OF FASCICULATION AND ELONGATION PROTEIN ζ-1 (FEZ1) IN PERIPHERAL BLOOD REVEALS DIFFERENCES IN GENE EXPRESSION IN PATIENTS WITH SCHIZOPHRENIA Vachev TI1,2, Stoyanova VK2,*, Ivanov HY2, Minkov IN1, Popov NT3 *Corresponding Author: Associate Professor Vili K. Stoyanova, M.D., Ph.D., Department of Pediatrics and Medical Genetics, Medical University ‒ Plovdiv, 15A Vasil Aprilov St., 4000 Plovdiv, Bulgaria. Tel: +359-32- 602-431; Fax: +359-32-602-593. E-mail: [email protected] ABSTRACT peripheral blood of patients with schizophrenia. Our results suggested a possible functional role of FEZ1 Schizophrenia (SZ) is a chronic neuropsychiatric in the pathogenesis of schizophrenia and confirmed disorder characterized by affective, neuromorpho- the utility of peripheral blood samples for molecular logical and cognitive impairment, deteriorated social profiling of psychiatric disorders including schizo- functioning and psychosis with underlying molecular phrenia. The current study describes FEZ1 gene ex- abnormalities, including gene expression changes. pression changes in peripheral blood of patients with Observations have suggested that fasciculation and schizophrenia with significantly down-regulation of elongation protein ζ-1 (FEZ1) may be implicated FEZ1 mRNA. Thus, our results provide support for in the pathogenesis of schizophrenia. Nevertheless, a model of SZ pathogenesis that includes the effects our current knowledge of the expression of FEZ1 in of FEZ1 expression. peripheral blood of schizophrenia patients remains Keywords: Fasciculation and elongation protein unclear. The purpose of this study was to identify ζ-1 (FEZ1); gene expression; quantitative reverse- the characteristic gene expression patterns of FEZ1 transcriptase polymerase chain reaction (qRT-PCR); in peripheral blood samples from schizophrenia pa- schizophrenia (SZ) tients. We performed quantitative reverse-transcrip- tase (qRT-PCR) analysis using peripheral blood from INTRODUCTION drug-free schizophrenia patients (n = 29) and age and gender-matched general population controls (n = 24). Schizophrenia (SZ) is a severe mental disorder For the identification of FEZ1 gene expression pat- affecting approximately 1.0% of the human popula- terns, we applied a comparative threshold cycle (CT) tion worldwide [1]. Twin, family and adoption studies method. A statistically significant difference ofFEZ1 strongly support that genetic factors play an important mRNA level was revealed in schizophrenia subjects role in the etiology of SZ. Currently, numerous genetic compared to healthy controls (p = 0.0034). To the studies, including linkage scans and their meta-analy- best of our knowledge, this study is the first describ- ses, candidate gene association analyses, gene expres- ing a down-regulation of FEZ1 gene expression in sion and genome-wide association studies (GWAS) have identified particular genes and chromosomal loci with the disorder [2-4]. Circulating blood is eas- 1 Department of Plant Physiology and Molecular Biology University ily accessible material and has been suggested as an of Plovdiv “Paisii Hilendarski”, Plovdiv, Bulgaria alternative to tissue samples for molecular profiling of 2 Department of Pediatrics and Medical Genetics, Medical University – Plovdiv, 4000 Plovdiv, Bulgaria human disease and disease risk [3,5]. This is based on 3 State Psychiatry Hospital Pazardzk, Pazardzk, Bulgaria the capacity of peripheral blood to reflect pathological 31 FEZ1 EXPRESSION IN SCHIZOPHRENIA changes in the body. As the brain tissue is not easily International Neuropsychiatric Interviews were done accessible for investigation, blood-based expression by a certified psychiatrist to evaluate the diagnosis profiling is increasingly being undertaken to search of paranoid SZ only, on Diagnostic and Statistical potential biomarkers for SZ [6,7]. Fasciculation and Manual of Mental Disorders (IVth edition) criteria elongation protein ζ-1 (FEZ1) is one of the first identi- and to exclude any mental disorder in the controls. fied binding partners of Disrupted-in Schizophrenia Important inclusion criteria were that the participants 1 (DISC1), a susceptibility gene for major mental had not received any medication (even psychotro- disorders including SZ in yeast two-hybrid screen of pic) 1 month before blood sampling and they had a an adult human brain library [8]. Moreover, proteomic standard breakfast, so they were assessed in a state techniques revealed that FEZ1 protein interacts with of exacerbation. Persons with other chronic medical various intracellular partners, such as motor signal- and current acute somatic/neurologic illness, alcohol ing, and structural proteins, one of which is DISC1 or drug abuse/dependancy were also excluded. The [9]. Currently, the role of FEZ1 in mammalian neuro- sample population included 15 males/14 females di- nal development in vivo is not well understood. The agnosed with SZ and 24 age- and gender-matched FEZ1 null mice exhibit hyperactivity and enhanced general population controls (12 males/12 females) responsiveness to psychostimulants [10], supporting with no evidence for any psychiatric or neurological a po-tential contribution of FEZ1 dysfunction to SZ. disorder in first-grade relatives (Table 1). Recently, additional evidence based on sequencing Table 1. Age descriptive statistics. of DISC1-interacting partner genes including FEZ1 revealed an increased burden of rare missense variants Groups n Mean SD SE Mean in SZ susceptibility in an isolated northern Swedish SZ 29 45.62 12.565 2.333 population [11]. In contrast, the FEZ1 gene shows no Controls 24 46.38 12.673 2.587 association to SZ in Caucasian or African American SD: standard deviation; SE: standard error; SZ: schizophrenia. populations [12]. However, no association was found in either population between specific haplotypes and Blood Collection and RNA Isolation. Blood any of the psychiatric disorders [13]. Interestingly, samples from the patients and control groups were there is a significant reduction of FEZ1 mRNA in collected in PAXgene Blood RNA collection tubes both hippocampus and dorsolateral prefrontal cortex (PreAnalyticX GmbH, Hombrechtikon, Switzerland) of SZ patients and also an association of the DISC1 that contain a reagent that lyses blood cells and im- genotype and FEZ1 mRNA levels [9]. All these find- mediately stabilizes intracellular RNA to preserve the ings raise the possibility that FEZ1 and DISC1 may gene expression profile. To reduce any potential bias assist in regulating both neuronal development and in gene expression due to diurnal variation, blood was risk for SZ. We hypothesized that previously shown drawn in the morning, from all of the subjects. We FEZ1 mRNA levels in prefrontal cortex of SZ patients used the PAXgene Blood miRNA Kit (PreAnalyticX) may be relevant to those in peripheral blood tissue. to extract total RNA from the blood samples [14]. To- The aim of this study was to identify gene expression tal RNA was then quantified by absorbance at A260 patterns of FEZ1 in peripheral blood samples from nm using Epoch Micro-Volume Spectrophotometer SZ patients. System (BioTek, Winooski, VT, USA) and the purity was estimated by the ratio A260/A280 nm. The ab- MATERIALS AND METHODS sorbance ratio of 260 nm and 280 nm (A260/A280) was between 1.93 and 2.1 for all samples included for Ethics Statement. This study and the informed further analysis. The RNA integrity was confirmed consent forms were approved by the Medical Uni- by non denaturing agarose gel electrophoresis, which versity of Plovdiv Ethics Committee. was then stored at ‒80 °C until further analysis. The Participants. Written informed consent was resulting RNA was treated with RNase-free DNase I obtained from 29 patients recruited at the State Psy- (Promega BioSciences, San Luis Obispo, CA, USA) chiatry Hospital Pazardjik, Pazardzk, Pazardzk, Bul- according to the manufacturer’s protocol and checked garia and 24 healthy volunteers. Routine psychiatric for DNA contaminations prior to copy DNA synthesis examination, wide medical hystory and the Mini- step.PAGE 32 BALKAN JOURNAL OF MEDICAL GENETICS Vachev TI, Stoyanova VK, Ivanov HY, Minkov IN, Popov NT Quantitative Reverse-Transcription Poly- the test sample and the calibrator samples was made merase Chain Reaction (qRT-PCR) Analysis of using the equation: FEZ1 mRNA Level. The qRT-PCR analyses were Ct(test) = Ct(target, test)‒Ct(reference, test) performed in at least three physically separate rooms Ct(calibrtator) = Ct(target, calibrator)‒Ct(reference, calibrator) in to order to reduce the chance for contamination. Second, normalization of the Ct of the test sam- Copy DNA for the protein coding gene was synthe- ple to the Ct of the calibrator was made using the sized from total RNA with oligo (dT)18 primer using equation: RevertAid First Strand cDNA Synthesis Kit accord- Ct = Ct(test)‒Ct(calibrator) ing to the assay protocol (Thermo Fisher Scientific, Finally, calculation of the expression ratio with Waltham, MA, USA). Reverse transcription reactions the following equation: contained 1 µg of total RNA samples, 1 µL oligo 2‒Ct = normalized expression ratio. (dT)18 primer and nuclease free water to a final vol- The result obtained is the fold increase (or de- ume of 12 µL, after incubation at 65 °C for 5 min., crease) of the target gene in the test samples relative we added 4 µL 5X RT buffer, 1 µL RiboLock RNase to the calibrator sample. Inhibitor (20 U/µL) (Thermo Fisher
Recommended publications
  • A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
    Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated.
    [Show full text]
  • Convergent Functional Genomics of Schizophrenia: from Comprehensive Understanding to Genetic Risk Prediction
    Molecular Psychiatry (2012) 17, 887 -- 905 & 2012 Macmillan Publishers Limited All rights reserved 1359-4184/12 www.nature.com/mp IMMEDIATE COMMUNICATION Convergent functional genomics of schizophrenia: from comprehensive understanding to genetic risk prediction M Ayalew1,2,9, H Le-Niculescu1,9, DF Levey1, N Jain1, B Changala1, SD Patel1, E Winiger1, A Breier1, A Shekhar1, R Amdur3, D Koller4, JI Nurnberger1, A Corvin5, M Geyer6, MT Tsuang6, D Salomon7, NJ Schork7, AH Fanous3, MC O’Donovan8 and AB Niculescu1,2 We have used a translational convergent functional genomics (CFG) approach to identify and prioritize genes involved in schizophrenia, by gene-level integration of genome-wide association study data with other genetic and gene expression studies in humans and animal models. Using this polyevidence scoring and pathway analyses, we identify top genes (DISC1, TCF4, MBP, MOBP, NCAM1, NRCAM, NDUFV2, RAB18, as well as ADCYAP1, BDNF, CNR1, COMT, DRD2, DTNBP1, GAD1, GRIA1, GRIN2B, HTR2A, NRG1, RELN, SNAP-25, TNIK), brain development, myelination, cell adhesion, glutamate receptor signaling, G-protein-- coupled receptor signaling and cAMP-mediated signaling as key to pathophysiology and as targets for therapeutic intervention. Overall, the data are consistent with a model of disrupted connectivity in schizophrenia, resulting from the effects of neurodevelopmental environmental stress on a background of genetic vulnerability. In addition, we show how the top candidate genes identified by CFG can be used to generate a genetic risk prediction score (GRPS) to aid schizophrenia diagnostics, with predictive ability in independent cohorts. The GRPS also differentiates classic age of onset schizophrenia from early onset and late-onset disease.
    [Show full text]
  • W J B C Biological Chemistry
    World Journal of W J B C Biological Chemistry Submit a Manuscript: https://www.f6publishing.com World J Biol Chem 2019 February 21; 10(2): 28-43 DOI: 10.4331/wjbc.v10.i2.28 ISSN 1949-8454 (online) REVIEW Fasciculation and elongation zeta proteins 1 and 2: From structural flexibility to functional diversity Mariana Bertini Teixeira, Marcos Rodrigo Alborghetti, Jörg Kobarg ORCID number: Mariana Bertini Mariana Bertini Teixeira, Jörg Kobarg, Institute of Biology, Department of Biochemistry and Teixeira (0000-0002-3431-3131); Tissue Biology, University of Campinas, Campinas 13083-862, Brazil Marcos Rodrigo Alborghetti (0000-0003-4517-5579); Jörg Kobarg Marcos Rodrigo Alborghetti, Department of Cell Biology, University of Brasilia, Brasilia (0000-0002-9419-0145). 70919-970, Brazil Author contributions: Teixeira MB, Jörg Kobarg, Faculty of Pharmaceutical Sciences, University of Campinas, Campinas 13083- Alborghetti MR and Kobarg J 862, Brazil performed the literature search, analyses and interpretation of the Corresponding author: Jörg Kobarg, PhD, Full Professor, Molecular Biologist, Faculty of data; elaborated the figures; Pharmaceutical Sciences, University of Campinas, Rua Monteiro Lobato 255, Bloco F, Sala conceived the overall idea of the 03, Campinas 13083-862, Brazil. [email protected] review, elaborated the final version Telephone: +55-19-35211443 of the text together; all the authors read, revised and approved the final version. Conflict-of-interest statement: The Abstract authors declare no conflict-of- Fasciculation and elongation zeta/zygin (FEZ) proteins are a family of hub interest. proteins and share many characteristics like high connectivity in interaction Open-Access: This article is an networks, they are involved in several cellular processes, evolve slowly and in open-access article which was general have intrinsically disordered regions.
    [Show full text]
  • FEZ1) in the Brain
    Review TheScientificWorldJOURNAL (2010) 10, 1646–1654 ISSN 1537-744X; DOI 10.1100/tsw.2010.151 Functions of Fasciculation and Elongation Protein Zeta-1 (FEZ1) in the Brain Andrés D. Maturana1,*, Toshitsugu Fujita2, and Shun’ichi Kuroda3,* 1Department of Bioengineering, Nagaoka University of Technology, Niigata, Japan; 2Research Institute for Microbial Diseases, Osaka University, Osaka, Japan; 3Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya, Japan E-mail: [email protected]; [email protected] Received March 16, 2010; Revised June 9, 2010; Accepted June 30, 2010; Published August 17, 2010 Fasciculation and elongation protein zeta-1 (FEZ1) is a mammalian ortholog of the Caenorhabditis elegans UNC-76 protein that possesses four coiled-coil domains and a nuclear localization signal. It is mainly expressed in the brain. Suppression of FEZ1 expression in cultured embryonic neurons causes deficiency of neuronal differentiation. Recently, proteomic techniques revealed that FEZ1 interacts with various intracellular partners, such as signaling, motor, and structural proteins. FEZ1 was shown to act as an antiviral factor. The findings reported so far indicate that FEZ1 is associated with neuronal development, neuropathologies, and viral infection. Based on these accumulating evidences, we herein review the biological functions of FEZ1. KEYWORDS: FEZ1, neuronal differentiation, neuronal disorders, virus infection, organelle transport DISCOVERY OF FASCICULATION AND ELONGATION PROTEIN ZETA-1 (FEZ1) FEZ1 is a mammalian ortholog of UNC-76, a protein found in the nematode Caenorhabditis elegans. UNC-76 has been used in an attempt to elucidate the mechanisms of locomotory defects. Genetic screenings of C. elegans mutants showing locomotory defects (uncoordinated or unc mutants) allowed the identification of various genes related to deficiencies in axonal guidance.
    [Show full text]
  • Phosphorylation-Regulated Axonal Dependent Transport of Syntaxin 1 Is Mediated by a Kinesin-1 Adapter
    Phosphorylation-regulated axonal dependent transport of syntaxin 1 is mediated by a Kinesin-1 adapter John Jia En Chuaa, Eugenia Butkevichb, Josephine M. Worseckc, Maike Kittelmannd, Mads Grønborga, Elmar Behrmanna, Ulrich Stelzlc, Nathan J. Pavlosa, Maciej M. Lalowskie,1, Stefan Eimerd, Erich E. Wankere, Dieter Robert Klopfensteinb,f,2, and Reinhard Jahna,2 aDepartment of Neurobiology, Max-Planck-Institute for Biophysical Chemistry, 37077 Göttingen, Germany; bGeorg-August-Universität Göttingen, Drittes Physikalisches Institut-Biophysik, 37077 Göttingen, Germany; fBiochemistry II, Georg-August-Universität Göttingen, 37073 Göttingen, Germany; cMax-Planck- Institute for Molecular Genetics, 14195 Berlin, Germany; dEuropean Neuroscience Institute Göttingen and German Research Foundation Research Center for Molecular Physiology of the Brain, 37077 Göttingen, Germany; and eMax Delbrueck Center for Molecular Medicine, 13092 Berlin-Buch, Germany Edited by Ronald D. Vale, University of California, San Francisco, CA, and approved March 5, 2012 (received for review August 22, 2011) Presynaptic nerve terminals are formed from preassembled vesicles knockouts (15), although in the latter case, a compensation by other that are delivered to the prospective synapse by kinesin-mediated Munc18 isoforms cannot be excluded. These defects were attrib- axonal transport. However, precisely how the various cargoes are uted to a need for Stx to be stabilized by Munc18 in the inactive linked to the motor proteins remains unclear. Here, we report conformation during transport to prevent it from being trapped in a transport complex linking syntaxin 1a (Stx) and Munc18, two pro- nonproductive SNARE complexes (10) but Munc18 could addi- teins functioning in synaptic vesicle exocytosis at the presynaptic tionally participate in loading Stx onto kinesin.
    [Show full text]
  • Fez1/Lzts1 Alterations in Gastric Carcinoma1
    1546 Vol. 7, 1546–1552, June 2001 Clinical Cancer Research Advances in Brief Fez1/Lzts1 Alterations in Gastric Carcinoma1 Andrea Vecchione,2 Hideshi Ishii,2 tected in one case that did not express Fez1/Lzts1. Hyper- Yih-Horng Shiao, Francesco Trapasso, methylation of the CpG island flanking the Fez1/Lzts1 pro- Massimo Rugge, Joseph F. Tamburrino, moter was evident in six of the eight cell lines examined as well as in the normal control. Yoshiki Murakumo, Hansjuerg Alder, 3 Conclusions: Our findings support FEZ1/LZTS1 as a Carlo M. Croce, and Raffaele Baffa candidate tumor suppressor gene at 8p in a subtype of Kimmel Cancer Center, Jefferson Medical College of Thomas gastric cancer and suggest that its inactivation is attributa- Jefferson University, Philadelphia, Pennsylvania 19107 [A. V., H. I., F. T., J. F. T., Y. M., H. A., C. M. C., R. B.]; Laboratory of ble to several factors including genomic deletion and meth- Comparative Carcinogenesis, National Cancer Institute, Frederick ylation. Cancer Research and Development Center, NIH, Frederick, Maryland 21702 [Y-H. S.]; and Department of Pathology, University of Padova, Padova 35126, Italy [M. R.]. Introduction Gastric cancer is the second most common malignant tu- Abstract mor worldwide, with a much higher incidence in Asian than in 4 Purpose: Loss of heterozygosity (LOH) involving the Western countries (1). The international TNM classification (2) short arm of chromosome 8 (8p) is a common feature of the and Lauren’s system (3) classify gastric cancer into two distinct malignant progression of human tumors, including gastric histological types: intestinal (well differentiated) and diffuse cancer.
    [Show full text]
  • Towards Personalized Medicine in Psychiatry: Focus on Suicide
    TOWARDS PERSONALIZED MEDICINE IN PSYCHIATRY: FOCUS ON SUICIDE Daniel F. Levey Submitted to the faculty of the University Graduate School in partial fulfillment of the requirements for the degree Doctor of Philosophy in the Program of Medical Neuroscience, Indiana University April 2017 ii Accepted by the Graduate Faculty, Indiana University, in partial fulfillment of the requirements for the degree of Doctor of Philosophy. Andrew J. Saykin, Psy. D. - Chair ___________________________ Alan F. Breier, M.D. Doctoral Committee Gerry S. Oxford, Ph.D. December 13, 2016 Anantha Shekhar, M.D., Ph.D. Alexander B. Niculescu III, M.D., Ph.D. iii Dedication This work is dedicated to all those who suffer, whether their pain is physical or psychological. iv Acknowledgements The work I have done over the last several years would not have been possible without the contributions of many people. I first need to thank my terrific mentor and PI, Dr. Alexander Niculescu. He has continuously given me advice and opportunities over the years even as he has suffered through my many mistakes, and I greatly appreciate his patience. The incredible passion he brings to his work every single day has been inspirational. It has been an at times painful but often exhilarating 5 years. I need to thank Helen Le-Niculescu for being a wonderful colleague and mentor. I learned a lot about organization and presentation working alongside her, and her tireless work ethic was an excellent example for a new graduate student. I had the pleasure of working with a number of great people over the years. Mikias Ayalew showed me the ropes of the lab and began my understanding of the power of algorithms.
    [Show full text]
  • NBR1 Sirna (H): Sc-94187
    SANTA CRUZ BIOTECHNOLOGY, INC. NBR1 siRNA (h): sc-94187 BACKGROUND SUPPORT REAGENTS NBR1 (neighbor of BRCA1 gene 1), also known as M17S2, MIG19 or 1A13B, is For optimal siRNA transfection efficiency, Santa Cruz Biotechnology’s a 966 amino acid protein that is encoded by a gene neighboring the well-char- siRNA Transfection Reagent: sc-29528 (0.3 ml), siRNA Transfection Medium: acterized tumor suppressor BRCA1. Originally thought to be the ovarian cancer sc-36868 (20 ml) and siRNA Dilution Buffer: sc-29527 (1.5 ml) are recom- antigen CA125, NBR1 contains structural motifs, including a B-box/coiled coil mended. Control siRNAs or Fluorescein Conjugated Control siRNAs are domain, an OPR domain and a ZZ-type zinc finger, that are characteristic of available as 10 µM in 66 µl. Each contain a scrambled sequence that will several proteins involved in cell transformation. NBR1 interacts with SQSTM1 not lead to the specific degradation of any known cellular mRNA. Fluorescein (sequestosome 1 protein), Titin and MuRF2 (muscle-specific RING finger pro- Conjugated Control siRNAs include: sc-36869, sc-44239, sc-44240 and tein 2), suggesting a possible role in developmental pathways. Two isoforms, sc-44241. Control siRNAs include: sc-37007, sc-44230, sc-44231, sc-44232, designated NBR1A and NBR1B, are expressed due to alternative splicing sc-44233, sc-44234, sc-44235, sc-44236, sc-44237 and sc-44238. events. Expression of both isoforms is downregulated in malignant mammary tissues, indicating that NBR1 may be involved in tumor suppression. GENE EXPRESSION MONITORING NBR1 (4BR): sc-130380 is recommended as a control antibody for monitoring REFERENCES of NBR1 gene expression knockdown by Western Blotting (starting dilution 1.
    [Show full text]
  • The FEZ1 Gene Shows No Association to Schizophrenia in Caucasian Or African American Populations
    Neuropsychopharmacology (2007) 32, 190–196 & 2007 Nature Publishing Group All rights reserved 0893-133X/07 $30.00 www.neuropsychopharmacology.org The FEZ1 Gene Shows No Association to Schizophrenia in Caucasian or African American Populations ,1 1 1 2 1 Colin A Hodgkinson* , David Goldman , Francesca Ducci , Pamela DeRosse , Daniel A Caycedo , 1 2 3 2 Emily R Newman , John M Kane , Alec Roy and Anil K Malhotra 1Section of Human Neurogenetics, Laboratory of Neurogenetics, National Institute on Alcohol Abuse and Alcoholism, Bethesda, MD, USA; 2 3 Psychiatry Research, Hillside Hospital, Glen Oaks, NY, USA; Psychiatry Service, Department of Veterans Affairs, New Jersey Health System, East Orange, NJ, USA Schizophrenia is a complex psychiatric disorder with both genetic and environmental components and is thought to be in part neurodevelopmental in origin. The DISC1 gene has been linked to schizophrenia in two independent Caucasian populations. The DISC1 protein interacts with a variety of proteins including FEZ1, the mammalian homolog of the Caenorhabditis elegans unc-76 protein, which is involved in axonal outgrowth. Variation at the FEZ1 gene has been associated with schizophrenia in a large Japanese cohort. In this study, nine SNP markers at the FEZ1 locus were genotyped in two populations. A North American Caucasian cohort of 212 healthy controls, 178 schizophrenics, 79 bipolar disorder, and 58 with schizoaffective disorder, and an African American cohort of 133 healthy controls, 162 schizophrenics, and 28 with schizoaffective disorder. No association to schizophrenia, bipolar disorder or schizoaffective disorder was found for any of the nine markers typed in these populations at the allelic or the genotypic level.
    [Show full text]
  • A Study of Fez1 and Fez2: Localization and Knock-Out Helene Bekkeli Schäfer Thesis for the Degree Master of Pharmacy May 2016 Supervisor: Assoc
    Uit The Arctic University of Norway Faculty of Health Science, Department of Pharmacy Research group: Molecular Cancer Research Group A study of Fez1 and Fez2: Localization and knock-out Helene Bekkeli Schäfer Thesis for the degree Master of Pharmacy May 2016 Supervisor: Assoc. Professor Eva Sjøttem Assistant supervisor: Hanne Britt Brenne Acknowledgments I want to thank Eva Sjøttem for helping me a lot! Thanks also to Hanne Brenne. I also want to thank my mom for encouraging me when I did not want to write up my work. 2 Abstract Autophagy is a fundamental cellular process where cell components get digested in autolysosomes and are recycled. Dysregulation of autophagy is involved in major diseases like cancer, neurodegeneration, inflammation and ischemia. In this thesis we have worked with fasciculation and elongation zeta (Fez) proteins, which are reported to inhibit autophagy. There are at least two mammalian Fez proteins, Fez1 and Fez2. Fez1 has three light chain three interaction regions (LIRs). Fez1 can use these to interact with LIR docking sites (LDS) on the autophagy Atg8 proteins. Using the Flp-In system, ten Hek293 cell lines were established. These cell lines have tetracycline inducible expression of EGFP-Fez1 mutants, and one cell line has inducible expression of EGFP-Fez2. Seven of the cell lines expressing EGFP-Fez1 are mutated in the LIR motifs. The other two express a phosphorylation mimicking mutant of Fez1 (S58E) and the un-phosphorylated form Fez1 (S58A). Fez1 binds kinesin-1. Phosphorylation of Fez1 S58 regulates the kinesin-1 binding. The second LIR is close to Fez1 S58 and phosphorylation of S58 may also regulate Atg8 interaction.
    [Show full text]
  • A Novel Candidate Tumor Suppressor Gene from 10Q24.3
    Oncogene (2001) 20, 6707 ± 6717 ã 2001 Nature Publishing Group All rights reserved 0950 ± 9232/01 $15.00 www.nature.com/onc LAPSER1: a novel candidate tumor suppressor gene from 10q24.3 Yofre Cabeza-Arvelaiz1, Timothy C Thompson2, Jorge L Sepulveda3 and A Craig Chinault*,1 1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, TX 77030, USA; 2Department of Urology, Baylor College of Medicine, Houston, Texas, TX 77030, USA; 3Department of Pathology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, PA 15261, USA Numerous LOH and mutation analysis studies in Transfer of these portions of each chromosome into dierent tumor tissues, including prostate, indicate that cancer cells has provided further evidence indicating there are multiple tumor suppressor genes (TSGs) that these regions harbor genes that suppress tumor- present within the human chromosome 8p21 ± 22 and igenicity (Ichikawa et al., 1994; Murakami et al., 1996). 10q23 ± 24 regions. Recently, we showed that LZTS1 (or Several candidate prostate cancer genes have been FEZ1), a putative TSG located on 8p22, has the isolated from 8p21 ± 22, including PRLTS (Fujiwara et potential to function as a cell growth modulator. We al., 1995), N33 (MacGrogan et al., 1996), and FEZ1 report here the cloning, gene organization, cDNA (Ishii et al., 1999). The expression of the latter, which sequence characterization and expression analysis of has now been designated as the LZTS1 (leucine zipper, LAPSER1,anLZTS1-related gene. This gene maps putative tumor suppressor 1) gene, has been found to within a subregion of human chromosome 10q24.3 that be altered in many tumors and cell lines including has been reported to be deleted in various cancers, esophageal, breast and prostate (Ishii et al., 1999).
    [Show full text]
  • PP1-Associated Signaling and − B/AP-1 Κ Inhibition of NF- Tolerance
    Downloaded from http://www.jimmunol.org/ by guest on October 3, 2021 is online at: average * and − B/AP-1 κ The Journal of Immunology published online 26 February 2014 from submission to initial decision 4 weeks from acceptance to publication http://www.jimmunol.org/content/early/2014/02/26/jimmun ol.1301610 Identification of Two Forms of TNF Tolerance in Human Monocytes: Differential Inhibition of NF- PP1-Associated Signaling Johannes Günther, Nico Vogt, Katharina Hampel, Rolf Bikker, Sharon Page, Benjamin Müller, Judith Kandemir, Michael Kracht, Oliver Dittrich-Breiholz, René Huber and Korbinian Brand J Immunol Submit online. Every submission reviewed by practicing scientists ? is published twice each month by Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts http://jimmunol.org/subscription Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html http://www.jimmunol.org/content/suppl/2014/02/26/jimmunol.130161 0.DCSupplemental Information about subscribing to The JI No Triage! Fast Publication! Rapid Reviews! 30 days* Why • • • Material Permissions Email Alerts Subscription Supplementary The Journal of Immunology The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2014 by The American Association of Immunologists, Inc. All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. This information is current as of October 3, 2021. Published February 26, 2014, doi:10.4049/jimmunol.1301610 The Journal of Immunology Identification of Two Forms of TNF Tolerance in Human Monocytes: Differential Inhibition of NF-kB/AP-1– and PP1-Associated Signaling Johannes Gunther,*€ ,1 Nico Vogt,*,1 Katharina Hampel,*,1 Rolf Bikker,* Sharon Page,* Benjamin Muller,*€ Judith Kandemir,* Michael Kracht,† Oliver Dittrich-Breiholz,‡ Rene´ Huber,* and Korbinian Brand* The molecular basis of TNF tolerance is poorly understood.
    [Show full text]