Supplementary Table S1. Prioritization of Candidate FPC Susceptibility Genes by Private Heterozygous Ptvs

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Supplementary Table S1. Prioritization of Candidate FPC Susceptibility Genes by Private Heterozygous Ptvs Supplementary Table S1. Prioritization of candidate FPC susceptibility genes by private heterozygous PTVs Number of private Number of private Number FPC patient heterozygous PTVs in heterozygous PTVs in tumors with somatic FPC susceptibility Hereditary cancer Hereditary Gene FPC kindred BCCS samples mutation DNA repair gene Cancer driver gene gene gene pancreatitis gene ATM 19 1 - Yes Yes Yes Yes - SSPO 12 8 1 - - - - - DNAH14 10 3 - - - - - - CD36 9 3 - - - - - - TET2 9 1 - - Yes - - - MUC16 8 14 - - - - - - DNHD1 7 4 1 - - - - - DNMT3A 7 1 - - Yes - - - PKHD1L1 7 9 - - - - - - DNAH3 6 5 - - - - - - MYH7B 6 1 - - - - - - PKD1L2 6 6 - - - - - - POLN 6 2 - Yes - - - - POLQ 6 7 - Yes - - - - RP1L1 6 6 - - - - - - TTN 6 5 4 - - - - - WDR87 6 7 - - - - - - ABCA13 5 3 1 - - - - - ASXL1 5 1 - - Yes - - - BBS10 5 0 - - - - - - BRCA2 5 6 1 Yes Yes Yes Yes - CENPJ 5 1 - - - - - - CEP290 5 5 - - - - - - CYP3A5 5 2 - - - - - - DNAH12 5 6 - - - - - - DNAH6 5 1 1 - - - - - EPPK1 5 4 - - - - - - ESYT3 5 1 - - - - - - FRAS1 5 4 - - - - - - HGC6.3 5 0 - - - - - - IGFN1 5 5 - - - - - - KCP 5 4 - - - - - - LRRC43 5 0 - - - - - - MCTP2 5 1 - - - - - - MPO 5 1 - - - - - - MUC4 5 5 - - - - - - OBSCN 5 8 2 - - - - - PALB2 5 0 - Yes - Yes Yes - SLCO1B3 5 2 - - - - - - SYT15 5 3 - - - - - - XIRP2 5 3 1 - - - - - ZNF266 5 2 - - - - - - ZNF530 5 1 - - - - - - ACACB 4 1 1 - - - - - ALS2CL 4 2 - - - - - - AMER3 4 0 2 - - - - - ANKRD35 4 4 - - - - - - ATP10B 4 1 - - - - - - ATP8B3 4 6 - - - - - - C10orf95 4 0 - - - - - - C2orf88 4 0 - - - - - - C5orf42 4 2 - - - - - - CACNA2D4 4 2 - - - - - - CAPN14 4 0 - - - - - - CCDC141 4 1 - - - - - - CCDC142 4 0 - - - - - - CCDC173 4 3 - - - - - - CCDC180 4 4 - - - - - - CDH26 4 1 - - - - - - CDKN2A 4 0 5 Yes Yes Yes Yes - CEP89 4 2 - - - - - - CFTR 4 5 - - - - - - CLTCL1 4 1 - - - - - - COL6A5 4 3 - - - - - - CROT 4 2 - - - - - - DHX58 4 3 - - - - - - DNAH10 4 4 1 - - - - - DNAH8 4 5 - - - - - - DNAH9 4 2 1 - - - - - DOK7 4 0 - - - - - - EFCAB13 4 0 1 - - - - - FAM151A 4 3 - - - - - - FAM186A 4 3 - - - - - - FANCG 4 1 - Yes - - Yes - FETUB 4 0 - - - - - - FPGT-TNNI3K 4 1 - - - - - - GPR155 4 0 - - - - - - HARS2 4 0 - - - - - - IQGAP2 4 2 - - - - - - KIF6 4 1 - - - - - - LOC440335 4 0 - - - - - - MYH1 4 2 - - - - - - MYO7B 4 2 3 - - - - - MYOF 4 2 - - - - - - MYOM2 4 3 - - - - - - NLRX1 4 0 - - - - - - PCDHAC1 4 2 - - - - - - PKDREJ 4 3 - - - - - - PTPN22 4 0 - - - - - - RANBP17 4 3 - - - - - - RYR1 4 5 4 - - - - - SLC4A11 4 1 - - - - - - SPAG4 4 0 - - - - - - SPATA31E1 4 4 - - - - - - SPG7 4 1 - - - - - - SPINK5 4 0 - - - - - - TEX15 4 7 - - - - - - TRIM47 4 1 - - - - - - TTLL6 4 2 - - - - - - USH2A 4 6 1 - - - - - USP45 4 5 - - - - - - ZBBX 4 1 1 - - - - - ZDBF2 4 1 - - - - - - ZFR2 4 1 - - - - - - ZNF142 4 0 - - - - - - AARS2 3 1 - - - - - - ABCA10 3 2 1 - - - - - ABCA12 3 0 - - - - - - ABCA4 3 0 - - - - - - ABCA7 3 4 - - - - - - ABCB5 3 3 - - - - - - ABCC11 3 0 1 - - - - - ABCC2 3 1 - - - - - - ACBD4 3 2 - - - - - - ADAM2 3 0 - - - - - - ADAMTSL4 3 1 - - - - - - ADCY10 3 3 - - - - - - ALS2CR11 3 1 - - - - - - ANKMY1 3 2 - - - - - - APOBR 3 1 - - - - - - ARHGAP10 3 1 - - - - - - ARHGEF40 3 2 - - - - - - ASB18 3 0 - - - - - - ASPSCR1 3 2 - - - - - - ATP13A5 3 0 - - - - - - ATP1A4 3 5 - - - - - - BANK1 3 1 - - - - - - BBS12 3 2 1 - - - - - BTBD11 3 0 - - - - - - BUB1B 3 0 1 Yes - - Yes - C16orf89 3 0 - - - - - - HEATR9 3 0 - - - - - - C17orf80 3 2 - - - - - - TBC1D32 3 4 - - - - - - C8A 3 2 - - - - - - C9orf131 3 1 - - - - - - C9orf84 3 0 - - - - - - CAPS2 3 2 - - - - - - CARD14 3 3 - - - - - - CARNS1 3 0 - - - - - - CATSPER3 3 0 - - - - - - CBX2 3 2 - - - - - - CCDC129 3 1 - - - - - - CCDC40 3 0 1 - - - - - CD101 3 2 - - - - - - CEP250 3 1 - - - - - - CHRNE 3 1 - - - - - - CIDEB 3 1 - - - - - - CLCA1 3 1 1 - - - - - CLCNKA 3 2 - - - - - - CLIC3 3 1 - - - - - - CLIP1 3 0 - - - - - - COL6A6 3 3 - - - - - - CPZ 3 1 - - - - - - CREB3L3 3 1 - - - - - - CSRP2BP 3 0 - - - - - - DENND4A 3 0 - - - - - - DNAH11 3 3 1 - - - - - DNAH17 3 3 - - - - - - DNAH7 3 4 3 - - - - - DNAJC28 3 1 - - - - - - DUOX1 3 1 - - - - - - DUSP27 3 2 - - - - - - ECT2L 3 0 - - - - - - EFCAB6 3 6 - - - - - - ADGRE2 3 5 - - - - - - EPX 3 3 - - - - - - ERAP2 3 2 - - - - - - ERVV-2 3 0 - - - - - - ESCO2 3 1 - Yes - - - - EYS 3 5 1 - - - - - FAM161A 3 1 - - - - - - FAM185A 3 0 - - - - - - FANCC 3 0 - Yes - - Yes - FANCM 3 3 2 Yes - - Yes - FCRL6 3 2 - - - - - - FER1L6 3 1 - - - - - - GALK2 3 0 - - - - - - GJB2 3 3 - - - - - - GP1BA 3 1 - - - - - - GPBAR1 3 0 - - - - - - HEATR6 3 3 - - - - - - HEMGN 3 1 - - - - - - HGFAC 3 1 - - - - - - IFNAR2 3 0 - - - - - - IGSF10 3 6 1 - - - - - IL12RB2 3 1 - - - - - - IQCE 3 1 1 - - - - - KIAA0141 3 1 - - - - - - KIAA1217 3 1 - - - - - - KIAA1683 3 4 - - - - - - LAMB4 3 4 - - - - - - LARS 3 2 - - - - - - LEKR1 3 0 - - - - - - LIME1 3 0 - - - - - - LOC402160 3 0 - - - - - - LRP1B 3 3 3 - - - - - LRRC26 3 0 - - - - - - LRRIQ1 3 6 1 - - - - - LTBP1 3 0 1 - - - - - LY75-CD302 3 1 - - - - - - LZTR1 3 1 - - - - - - MAMDC4 3 4 - - - - - - MAN2A2 3 0 - - - - - - MAN2C1 3 2 - - - - - - MFI2 3 1 - - - - - - MMP9 3 1 - - - - - - MNS1 3 1 - - - - - - MSH4 3 1 - Yes - - - - MTERF3 3 0 - - - - - - MYH4 3 7 - - - - - - MYO1H 3 0 - - - - - - MYO3B 3 1 - - - - - - MYO5B 3 0 - - - - - - MYOM3 3 2 - - - - - - NBEAL1 3 1 - - - - - - NEK1 3 1 - - - - - - NEK3 3 1 - - - - - - NLRP6 3 1 - - - - - - NLRP8 3 0 - - - - - - NPL 3 0 1 - - - - - NRAP 3 2 2 - - - - - NUDT8 3 1 - - - - - - NUP85 3 0 - - - - - - OR2T2 3 0 1 - - - - - P2RX6 3 0 - - - - - - PALLD 3 1 - - - - - - PCDH15 3 3 3 - - - - - PCDHGA9 3 0 - - - - - - PCDHGB5 3 0 - - - - - - PDE4C 3 0 - - - - - - PDE4DIP 3 3 - - - - - - PHYHD1 3 2 - - - - - - PKHD1 3 5 1 - - - - - PLB1 3 4 - - - - - - PPL 3 0 - - - - - - PRR5-ARHGAP8 3 2 - - - - - - RAD54L 3 0 1 Yes - - - - RGS22 3 1 - - - - - - RNF213 3 4 - - - - - - SACS 3 2 2 - - - - - SAMD11 3 0 - - - - - - SCN10A 3 1 - - - - - - SCNN1D 3 3 - - - - - - SEMA3B 3 1 - - - - - - SFI1 3 6 - - - - - - SLC12A3 3 3 - - - - - - SLC14A1 3 0 - - - - - - SLC15A5 3 0 - - - - - - SLC26A10 3 0 - - - - - - SLC4A9 3 1 - - - - - - SLCO1B1 3 2 - - - - - - SMC2 3 1 - - - - - - STARD9 3 6 - - - - - - SYCE1L 3 0 - - - - - - TDRD6 3 2 - - - - - - TG 3 2 - - - - - - THUMPD3 3 1 - - - - - - TJAP1 3 0 - - - - - - TMEM63A 3 3 - - - - - - TNFRSF10B 3 1 - - - - - - TNN 3 3 - - - - - - TONSL 3 0 - - - - - - TREM1 3 0 - - - - - - TRIM6-TRIM34 3 3 - - - - - - TRPM2 3 4 - - - - - - TRPM4 3 1 - - - - - - TYRP1 3 0 1 - - - - - UBA7 3 0 - - - - - - ULK4 3 0 - - - - - - USP4 3 0 - - - - - - VWA8 3 5 - - - - - - WDR41 3 0 - - - - - - ZCCHC4 3 3 - - - - - - ZMYM2 3 0 - - - - - - ZNF133 3 0 - - - - - - ZNF175 3 2 - - - - - - ZNF211 3 0 - - - - - - ZNF227 3 0 - - - - - - ZNF229 3 0 - - - - - - ZNF30 3 0 - - - - - - ZNF554 3 1 - - - - - - ZNF573 3 0 - - - - - - ZNF620 3 1 - - - - - - ZNF74 3 2 - - - - - - MARCH10 2 1 - - - - - - SEPT8 2 0 - - - - - - A2ML1 2 2 - - - - - - AAR2 2 1 - - - - - - ABCA5 2 0 - - - - - - ABCA8 2 3 1 - - - - - ABCA9 2 4 - - - - - - ABCB10 2 0 - - - - - - ABCC4 2 0 1 - - - - - ABCC9 2 4 - - - - - - ABL2 2 1 - - - - - - ACAT1 2 0 - - - - - - ACCSL 2 0 - - - - - - ACOX3 2 2 - - - - - - ACOXL 2 2 - - - - - - ACSM1 2 1 - - - - - - ACSM2B 2 1 - - - - - - ACTR5 2 0 - - - - - - ADAM15 2 2 - - - - - - ADAM29 2 2 1 - - - - - ADAM33 2 0 - - - - - - ADAMTS12 2 3 - - - - - - ADCK2 2 1 - - - - - - ADRB1 2 0 - - - - - - AFP 2 0 - - - - - - AGAP3 2 1 - - - - - - AGBL1 2 3 - - - - - - AGMO 2 3 - - - - - - AGR3 2 2 - - - - - - AIFM3 2 1 - - - - - - AIRE 2 1 - - - - - - AKAP12 2 0 - - - - - - AKR1D1 2 3 - - - - - - ALDH16A1 2 2 - - - - - - ALDH3A1 2 1 - - - - - - ALDH3B1 2 0 1 - - - - - ALG13 2 0 - - - - - - ALLC 2 0 - - - - - - ALMS1 2 4 - - - - - - ALOX5AP 2 0 - - - - - - ALPK2 2 4 - - - - - - ALPK3 2 1 1 - - - - - ALS2CR12 2 2 - - - - - - CARF 2 0 - - - - - - AMHR2 2 1 - - - - - - AMICA1 2 2 - - - - - - AMPD3 2 1 - - - - - - ANGPTL4 2 2 - - - - - - ANGPTL5 2 3 - - - - - - ANKK1 2 3 - - - - - - ANKRD13D 2 0 - - - - - - ANKRD42 2 1 - - - - - - ANKZF1 2 2 - - - - - - ANO7 2 2 1 - - - - - ANXA5 2 0 - - - - - - AOX1 2 6 - - - - - - AP1G2 2 1 - - - - - - APOL5 2 2 - - - - - - APPL2 2 3 - - - - - - LVRN 2 2 - - - - - - ARHGAP11A 2 0 - - - - - - ARHGAP25 2 0 - - - - - - ARHGAP9 2 0 - - - - - - ARHGEF1 2 0 1 - - - - - ARHGEF10 2 2 - - - - - - ARHGEF37 2 2 - - - - - - ARL10 2 0 - - - - - - ARSA 2 1 - - - - - - ASB11 2 0 - - - - - - ASB13 2 0 - - - - - - ASPG 2 2 - - - - - - ASPM 2 1 - - - - - - ASTE1 2 2 - Yes - - - - ASXL3 2 0 - - - - - - ATF7IP2 2 0 - - - - - - ATG2B 2 1 - - - - - - ATG9B 2 1 - - - - - - ATP2C2 2 3 - - - - - - ATP6V0A4 2 0 - - - - - - ATR 2 5 - Yes - - - - B3GNTL1 2 1 - - - - - - BBS4 2 0 - - - - - - BEST3 2 2 - - - - - - BIRC6 2 1 1 - - - - - BLVRB 2 0 - - - - - - BNIPL 2 1 - - - - - - BRCA1 2 2 - Yes Yes Yes Yes - BRICD5 2 2 - - - - - - BRIP1 2 4 - Yes - - Yes - BSG 2 0 - - - - - - BTN2A2 2 2 - - - - - - C11orf16 2 1 - - - - - - C11orf40 2 2 - - - - - - C11orf42 2 1 - - - - - - C11orf49 2 1 - - - - - - RITA1 2 1 - - - - - - C14orf159 2 3 - - - - - - C16orf13 2 0 - - - - - - C16orf58 2 1 - - - - - - C1orf100 2 0 1 - - - - - C1orf101 2 2 - - - - - - C1orf112 2 1 - - - - - - C1orf116 2 0 - - - - - - C1orf177 2 2 - - - - - - C1orf204 2 0 - - - - - - C1QTNF7 2 0 - - - - - - C21orf58 2 1 - - - - - - C22orf23 2 1 - - - - - - PRR34 2 0 - - - - - - C22orf29 2.
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    2311 I Azimi and G R Monteith Ion channels and EMT 23:11 R517–R525 Review in cancer Plasma membrane ion channels and epithelial to mesenchymal transition in cancer cells Iman Azimi1,2,3 and Gregory R Monteith1,2,3 Correspondence should be addressed 1 The School of Pharmacy, The University of Queensland, Brisbane, Queensland, Australia to G R Monteith 2 Mater Research Institute, The University of Queensland, Brisbane, Queensland, Australia Email 3 Translational Research Institute, Brisbane, Queensland, Australia [email protected] Abstract A variety of studies have suggested that epithelial to mesenchymal transition (EMT) Key Words may be important in the progression of cancer in patients through metastasis and/or f calcium therapeutic resistance. A number of pathways have been investigated in EMT in cancer f cell signalling cells. Recently, changes in plasma membrane ion channel expression as a consequence f intracellular signalling of EMT have been reported. Other studies have identified specific ion channels able to f metastasis regulate aspects of EMT induction. The utility of plasma membrane ion channels as targets for pharmacological modulation make them attractive for therapeutic approaches to target EMT. In this review, we provide an overview of some of the key plasma membrane ion channel types and highlight some of the studies that are beginning to define changes in plasma membrane ion channels as a consequence of EMT and also their possible roles in Endocrine-Related Cancer Endocrine-Related Cancer Endocrine-Related EMT induction. (2016) 23, R517–R525 Introduction Epithelial to mesenchymal transition (EMT) refers to the treatment of the primary tumour are often feasible process whereby epithelial cells which typically exhibit (e.g.
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  • S41467-020-18249-3.Pdf
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