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BGBM Annual Report 2017–2019
NETWORKING FOR DIVERSITY Annual Report 2017 – 2019 2017 – BGBM BGBM Annual Report 2017 – 2019 Cover image: Research into global biodiversity and its significance for humanity is impossible without networks. The topic of networking can be understood in different ways: in the natural world, with the life processes within an organism – visible in the network of the veins of a leaf or in the genetic diversity in populations of plants – networking takes place by means of pollen, via pollinators or the wind. In the world of research, individual objects, such as a particular plant, are networked with the data obtained from them. Networking is also crucial if this data is to be effective as a knowledge base for solving global issues of the future: collaboration between scientific experts within and across disciplines and with stakeholders at regional, national and international level. Contents Foreword 5 Organisation 56 A network for plants 6 Facts and figures 57 Staff, visiting scientists, doctoral students 57 Key events of 2017 – 2019 10 Affiliated and unsalaried scientists, volunteers 58 BGBM publications 59 When diversity goes online 16 Species newly described by BGBM authors 78 Families and genera newly described by BGBM authors 82 On the quest for diversity 20 Online resources and databases 83 Externally funded projects 87 Invisible diversity 24 Hosted scientific events 2017 – 2019 92 Collections 93 Humboldt 2.0 30 Library 96 BGBM Press: publications 97 Between East and West 36 Botanical Museum 99 Press and public relations 101 At the service of science 40 Visitor numbers 102 Budget 103 A research museum 44 Publication information 104 Hands-on science 50 Our symbol, the corncockle 52 4 5 Foreword BGBM Annual Report 2017 – 2019 We are facing vital challenges. -
Checklist of Argentine Agaricales 4
Checklist of the Argentine Agaricales 4. Tricholomataceae and Polyporaceae 1 2* N. NIVEIRO & E. ALBERTÓ 1Instituto de Botánica del Nordeste (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina 2Instituto de Investigaciones Biotecnológicas (UNSAM-CONICET) Intendente Marino Km 8.200, Chascomús, Buenos Aires, CP 7130, Argentina CORRESPONDENCE TO *: [email protected] ABSTRACT— A species checklist of 86 genera and 709 species belonging to the families Tricholomataceae and Polyporaceae occurring in Argentina, and including all the species previously published up to year 2011 is presented. KEY WORDS—Agaricomycetes, Marasmius, Mycena, Collybia, Clitocybe Introduction The aim of the Checklist of the Argentinean Agaricales is to establish a baseline of knowledge on the diversity of mushrooms species described in the literature from Argentina up to 2011. The families Amanitaceae, Pluteaceae, Hygrophoraceae, Coprinaceae, Strophariaceae, Bolbitaceae and Crepidotaceae were previoulsy compiled (Niveiro & Albertó 2012a-c). In this contribution, the families Tricholomataceae and Polyporaceae are presented. Materials & Methods Nomenclature and classification systems This checklist compiled data from the available literature on Tricholomataceae and Polyporaceae recorded for Argentina up to the year 2011. Nomenclature and classification systems followed Singer (1986) for families. The genera Pleurotus, Panus, Lentinus, and Schyzophyllum are included in the family Polyporaceae. The Tribe Polyporae (including the genera Polyporus, Pseudofavolus, and Mycobonia) is excluded. There were important rearrangements in the families Tricholomataceae and Polyporaceae according to Singer (1986) over time to present. Tricholomataceae was distributed in six families: Tricholomataceae, Marasmiaceae, Physalacriaceae, Lyophyllaceae, Mycenaceae, and Hydnaginaceae. Some genera belonging to this family were transferred to other orders, i.e. Rickenella (Rickenellaceae, Hymenochaetales), and Lentinellus (Auriscalpiaceae, Russulales). -
Biological Diversity
From the Editors’ Desk….. Biodiversity, which is defined as the variety and variability among living organisms and the ecological complexes in which they occur, is measured at three levels – the gene, the species, and the ecosystem. Forest is a key element of our terrestrial ecological systems. They comprise tree- dominated vegetative associations with an innate complexity, inherent diversity, and serve as a renewable resource base as well as habitat for a myriad of life forms. Forests render numerous goods and services, and maintain life-support systems so essential for life on earth. India in its geographical area includes 1.8% of forest area according to the Forest Survey of India (2000). The forests cover an actual area of 63.73 million ha (19.39%) and consist of 37.74 million ha of dense forests, 25.51 million ha of open forest and 0.487 million ha of mangroves, apart from 5.19 million ha of scrub and comprises 16 major forest groups (MoEF, 2002). India has a rich and varied heritage of biodiversity covering ten biogeographical zones, the trans-Himalayan, the Himalayan, the Indian desert, the semi-arid zone(s), the Western Ghats, the Deccan Peninsula, the Gangetic Plain, North-East India, and the islands and coasts (Rodgers; Panwar and Mathur, 2000). India is rich at all levels of biodiversity and is one of the 12 megadiversity countries in the world. India’s wide range of climatic and topographical features has resulted in a high level of ecosystem diversity encompassing forests, wetlands, grasslands, deserts, coastal and marine ecosystems, each with a unique assemblage of species (MoEF, 2002). -
Influence of Tree Species on Richness and Diversity of Epigeous Fungal
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Archive Ouverte en Sciences de l'Information et de la Communication fungal ecology 4 (2011) 22e31 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/funeco Influence of tree species on richness and diversity of epigeous fungal communities in a French temperate forest stand Marc BUE´Ea,*, Jean-Paul MAURICEb, Bernd ZELLERc, Sitraka ANDRIANARISOAc, Jacques RANGERc,Re´gis COURTECUISSEd, Benoıˆt MARC¸AISa, Franc¸ois LE TACONa aINRA Nancy, UMR INRA/UHP 1136 Interactions Arbres/Microorganismes, 54280 Champenoux, France bGroupe Mycologique Vosgien, 18 bis, place des Cordeliers, 88300 Neufchaˆteau, France cINRA Nancy, UR 1138 Bioge´ochimie des Ecosyste`mes Forestiers, 54280 Champenoux, France dUniversite´ de Lille, Faculte´ de Pharmacie, F59006 Lille, France article info abstract Article history: Epigeous saprotrophic and ectomycorrhizal (ECM) fungal sporocarps were assessed during Received 30 September 2009 7 yr in a French temperate experimental forest site with six 30-year-old mono-specific Revision received 10 May 2010 plantations (four coniferous and two hardwood plantations) and one 150-year-old native Accepted 21 July 2010 mixed deciduous forest. A total of 331 fungal species were identified. Half of the fungal Available online 6 October 2010 species were ECM, but this proportion varied slightly by forest composition. The replace- Corresponding editor: Anne Pringle ment of the native forest by mono-specific plantations, including native species such as beech and oak, considerably altered the diversity of epigeous ECM and saprotrophic fungi. Keywords: Among the six mono-specific stands, fungal diversity was the highest in Nordmann fir and Conifer plantation Norway spruce plantations and the lowest in Corsican pine and Douglas fir plantations. -
CZECH MYCOLOGY Publication of the Czech Scientific Society for Mycology
CZECH MYCOLOGY Publication of the Czech Scientific Society for Mycology Volume 57 August 2005 Number 1-2 Central European genera of the Boletaceae and Suillaceae, with notes on their anatomical characters Jo s e f Š u t a r a Prosetická 239, 415 01 Tbplice, Czech Republic Šutara J. (2005): Central European genera of the Boletaceae and Suillaceae, with notes on their anatomical characters. - Czech Mycol. 57: 1-50. A taxonomic survey of Central European genera of the families Boletaceae and Suillaceae with tubular hymenophores, including the lamellate Phylloporus, is presented. Questions concerning the delimitation of the bolete genera are discussed. Descriptions and keys to the families and genera are based predominantly on anatomical characters of the carpophores. Attention is also paid to peripheral layers of stipe tissue, whose anatomical structure has not been sufficiently studied. The study of these layers, above all of the caulohymenium and the lateral stipe stratum, can provide information important for a better understanding of relationships between taxonomic groups in these families. The presence (or absence) of the caulohymenium with spore-bearing caulobasidia on the stipe surface is here considered as a significant ge neric character of boletes. A new combination, Pseudoboletus astraeicola (Imazeki) Šutara, is proposed. Key words: Boletaceae, Suillaceae, generic taxonomy, anatomical characters. Šutara J. (2005): Středoevropské rody čeledí Boletaceae a Suillaceae, s poznámka mi k jejich anatomickým znakům. - Czech Mycol. 57: 1-50. Je předložen taxonomický přehled středoevropských rodů čeledí Boletaceae a. SuiUaceae s rourko- vitým hymenoforem, včetně rodu Phylloporus s lupeny. Jsou diskutovány otázky týkající se vymezení hřibovitých rodů. Popisy a klíče k čeledím a rodům jsou založeny převážně na anatomických znacích plodnic. -
Forest Fungi in Ireland
FOREST FUNGI IN IRELAND PAUL DOWDING and LOUIS SMITH COFORD, National Council for Forest Research and Development Arena House Arena Road Sandyford Dublin 18 Ireland Tel: + 353 1 2130725 Fax: + 353 1 2130611 © COFORD 2008 First published in 2008 by COFORD, National Council for Forest Research and Development, Dublin, Ireland. All rights reserved. No part of this publication may be reproduced, or stored in a retrieval system or transmitted in any form or by any means, electronic, electrostatic, magnetic tape, mechanical, photocopying recording or otherwise, without prior permission in writing from COFORD. All photographs and illustrations are the copyright of the authors unless otherwise indicated. ISBN 1 902696 62 X Title: Forest fungi in Ireland. Authors: Paul Dowding and Louis Smith Citation: Dowding, P. and Smith, L. 2008. Forest fungi in Ireland. COFORD, Dublin. The views and opinions expressed in this publication belong to the authors alone and do not necessarily reflect those of COFORD. i CONTENTS Foreword..................................................................................................................v Réamhfhocal...........................................................................................................vi Preface ....................................................................................................................vii Réamhrá................................................................................................................viii Acknowledgements...............................................................................................ix -
A Synopsis of the Saddle Fungi (Helvella: Ascomycota) in Europe – Species Delimitation, Taxonomy and Typification
Persoonia 39, 2017: 201–253 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2017.39.09 A synopsis of the saddle fungi (Helvella: Ascomycota) in Europe – species delimitation, taxonomy and typification I. Skrede1,*, T. Carlsen1, T. Schumacher1 Key words Abstract Helvella is a widespread, speciose genus of large apothecial ascomycetes (Pezizomycete: Pezizales) that are found in terrestrial biomes of the Northern and Southern Hemispheres. This study represents a beginning on molecular phylogeny assessing species limits and applying correct names for Helvella species based on type material and specimens in the Pezizales university herbaria (fungaria) of Copenhagen (C), Harvard (FH) and Oslo (O). We use morphology and phylogenetic systematics evidence from four loci – heat shock protein 90 (hsp), translation elongation factor alpha (tef), RNA polymerase II (rpb2) and the nuclear large subunit ribosomal DNA (LSU) – to assess species boundaries in an expanded sample of Helvella specimens from Europe. We combine the morphological and phylogenetic information from 55 Helvella species from Europe with a small sample of Helvella species from other regions of the world. Little intraspecific variation was detected within the species using these molecular markers; hsp and rpb2 markers provided useful barcodes for species delimitation in this genus, while LSU provided more variable resolution among the pertinent species. We discuss typification issues and identify molecular characteristics for 55 European Helvella species, designate neo- and epitypes for 30 species, and describe seven Helvella species new to science, i.e., H. alpicola, H. alpina, H. carnosa, H. danica, H. nannfeldtii, H. pubescens and H. -
Introduction Materials and Methods Results
Journal of Applied Biological Sciences 6 (3): 31-33, 2012 ISSN: 1307-1130, E-ISSN: 2146-0108, www.nobel.gen.tr Two New Helvella Records For Turkish Mycobiota Ilgaz AKATA1 Abdullah KAYA2* 1Ankara University, Science Faculty, Department of Biology, Ankara, TURKEY 2Karamanoglu Mehmetbey University, Kamil Özdag Science Faculty, Department of Biology, Karaman, TURKEY *Corresponding Author Received: April 10, 2012 e-mail:[email protected] Accepted: May 15, 2012 Abstract Two Helvella species, Helvella macropus (Pers.) P. Karst and H. pezizoides Afzel. are given as new records for Turkey. Short descriptions and photographs related to macro and micromorphologies of the species are provided and discussed briefly. Keywords: Helvella, biodiversity, macrofungi, new records, Turkey INTRODUCTION MATERIALS AND METHODS Helvella, commonly known as elfin saddles or false morels, Macrofungi samples were collected from Yomra district is a genus of the family Helvellaceae (Ascomycota) [1]. The of Trabzon province (Turkey) in 2011. During field study, members of the genus, are characterized by sub sessile or necessary morphological and ecological features of the stipitate fruiting body, cup to saddle shaped apothecia, smooth, specimens were recorded and they were photographed in wavy or wrinkled hymenium, 1-2 mm thick flesh, operculate to their natural habitats. Then the samples were taken to the nonamyloid asci, and cylindrical and tapering or grooved and laboratory for further investigation. Some reagents (distilled ribbed stem, ellipsoid to fusoid, hyaline, smooth to verrucose water, Melzer’s reagent, 5% KOH) were used for microscopic spores with one large central oil droplet [2]. investigation. Microphotographs were taken under a Leica DM The genus, which was erected by Linnaeus in 1753 to 1000 light microscope. -
Fungal Genomes Tell a Story of Ecological Adaptations
Folia Biologica et Oecologica 10: 9–17 (2014) Acta Universitatis Lodziensis Fungal genomes tell a story of ecological adaptations ANNA MUSZEWSKA Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawinskiego 5A, 02-106 Warsaw, Poland E-mail: [email protected] ABSTRACT One genome enables a fungus to have various lifestyles and strategies depending on environmental conditions and in the presence of specific counterparts. The nature of their interactions with other living and abiotic elements is a consequence of their osmotrophism. The ability to degrade complex compounds and especially plant biomass makes them a key component of the global carbon circulation cycle. Since the first fungal genomic sequence was published in 1996 mycology has benefited from the technolgical progress. The available data create an unprecedented opportunity to perform massive comparative studies with complex study design variants targeted at all cellular processes. KEY WORDS: fungal genomics, osmotroph, pathogenic fungi, mycorrhiza, symbiotic fungi, HGT Fungal ecology is a consequence of osmotrophy Fungi play a pivotal role both in encountered as leaf endosymbionts industry and human health (Fisher et al. (Spatafora et al. 2007). Since fungi are 2012). They are involved in biomass involved in complex relationships with degradation, plant and animal infections, other organisms, their ecological fermentation and chemical industry etc. repertoire is reflected in their genomes. They can be present in the form of The nature of their interactions with other resting spores, motile spores, amebae (in organisms and environment is defined by Cryptomycota, Blastocladiomycota, their osmotrophic lifestyle. Nutrient Chytrydiomycota), hyphae or fruiting acquisition and communication with bodies. The same fungal species symbionts and hosts are mediated by depending on environmental conditions secreted molecules. -
Description and Identification of Ostryopsis Davidiana Ectomycorrhizae in Inner Mongolia Mountain Forest of China
Österr. Z. Pilzk. 26 (2017) – Austrian J. Mycol. 26 (2017) 17 Description and identification of Ostryopsis davidiana ectomycorrhizae in Inner Mongolia mountain forest of China QING-ZHI YAO1 WEI YAN2 HUI-YING ZHAO1 JIE WEI2 1 Life Science College 2 Forestry College Inner Mongolia Agriculture University Huhhot, 010018, P. R. China Email: [email protected] Accepted 27. March 2017. © Austrian Mycological Society, published online 23. August 2017 YAO, Q.-Z., YAN, W., ZHAO, H.-Y., WEI, J., 2017: Description and identification of Ostryopsis davidi- ana ectomycorrhizae in Inner Mongolia mountain forest of China. – Austrian J. Mycol. 26: 17–25. Key words: ECM, Mountain forest, Ostryopsis davidiana, morpho-anatomical features. Abstract: The ectomycorrhizal (ECM) fungal composition and anatomical structures of root samples of the shrub Ostryopsis davidiana were examined. The root samples were collected from two plots in the Daqing Mountain and Han Mountain around Hohhot, Inner Mongolia of China. Basing on mor- pho-anatomical features of the samples, we have got totally 12 ECM morphotypes. Twelve fungal taxa were identified via sequencing of the internal transcribed spacer region of their nuclear rDNA. Nine species are Basidiomycotina, incl. Thelephoraceae (Tomentella), Cortinariaceae (Inocybe and Cortinarius), Tremellaceae (Sebacina), Russulaceae (Lactarius), and Tricholomataceae (Tricholoma), three Ascomycotina, incl. Elaphomycetaceae (Cenococcum), Tuberaceae (Tuber), and Pyronema- taceae (Wilcoxina). Cenococcum geophilum was the dominant species in O. davidiana. The three To- mentella and the two Inocybe ECMF of O. davidiana are very common in Inner Mongolia. Zusammenfassung: Die Pilzdiversität der Ektomykorrhiza (ECM) und deren anatomische Strukturen von Wurzelproben des Strauches Ostryopsis davidiana wurden untersucht. Die Wurzelproben wurden aus zwei Untersuchungsflächen im Daqing Berg und Han Berg nahe Hohhot, Innere Mongolei, China, gesammelt. -
Behaviour in Cultures and Habitat Requirements of Species Within the Genera Loreleia and Rickenella (Agaricales)
ACTA MYCOLOGICA Dedicated to Professor Alina Skirgiełło Vol. 41 (2): 189-208 on the occasion of her ninety-fifth birthday 2006 Behaviour in cultures and habitat requirements of species within the genera Loreleia and Rickenella (Agaricales) ANDREAS BRESINSKY and ANGELIKA SCHÖTZ Institute of Botany, Regensburg University D-93040 Regensburg, [email protected] Bresinsky A., Schötz A.: Behaviour in cultures and habitat requirements of species within the genera Loreleia and Rickenella (Agaricales). Acta Mycol. 41 (2): 189-208, 2006. The term eco-geogram is introduced for surveying (in logical order) ecological and geographical data connected with fungal species. The database PILZOEK was established for that purpose. Eco-geograms are provided in this paper as an example for data retrieval from PILZOEK concerning the agarics Loreleia marchantiae, L. postii, Rickenella swartzii and R. fibula. The potential degree of endangerment is discussed in regard to habitat requirements. European species of Loreleia are not regarded to be endangered in Central Europe, although the risk to get threatened, because of low frequency of fruit body occurrence and quite a narrow substrate specialization, could be higher than in case of Rickenella fibula and R. swartzii. Cultures of Rickenella fibula, R. swartzii, Loreleia marchantiae (= Gerronema daamsii) and L. postii were investigated in regard to pigment accumulation, chlamydospore formation and some other characters. Key words: eco-geogram, Rickenella, Loreleia, habitats, substrates, cultures, endangerment INTRODUCTION The genera Loreleia and Rickenella emerged taxonomically from the genus Ger- ronema in its broader sense, as it was originally interpreted by Singer 1986. Various contributions to the generic concept brought evidence to the assumption that Ger- ronema in the sense of Singer (1986) represents an artificial assemblage of species. -
Composition and Specialization of the Lichen Functional Traits in a Primeval Forest—Does Ecosystem Organization Level Matter?
Article Composition and Specialization of the Lichen Functional Traits in a Primeval Forest—Does Ecosystem Organization Level Matter? Anna Łubek 1,*, Martin Kukwa 2 , Bogdan Jaroszewicz 3 and Patryk Czortek 3 1 Division of Environmental Biology, Institute of Biology, The Jan Kochanowski University in Kielce, Uniwersytecka 7, PL-25-406 Kielce, Poland 2 Department of Plant Taxonomy and Nature Conservation, Faculty of Biology, University of Gda´nsk, Wita Stwosza 59, PL-80-308 Gda´nsk,Poland; [email protected] 3 Białowieza˙ Geobotanical Station, Faculty of Biology, University of Warsaw, Sportowa 19, PL-17-230 Białowieza,˙ Poland; [email protected] (B.J.); [email protected] (P.C.) * Correspondence: [email protected] Abstract: Current trends emphasize the importance of the examination of the functional composition of lichens, which may provide information on the species realized niche diversity and community assembly processes, thus enabling one to understand the specific adaptations of lichens and their interaction with the environment. We analyzed the distribution and specialization of diverse mor- phological, anatomical and chemical (lichen secondary metabolites) traits in lichen communities in a close-to-natural forest of lowland Europe. We considered these traits in relation to three levels of forest ecosystem organization: forest communities, phorophyte species and substrates, in order to recognize the specialization of functional traits to different levels of the forest complexity. Traits related to the sexual reproduction of mycobionts (i.e., ascomata types: lecanoroid apothecia, lecideoid Citation: Łubek, A.; Kukwa, M.; apothecia, arthonioid apothecia, lirellate apothecia, stalked apothecia and perithecia) and asexual Jaroszewicz, B.; Czortek, P.