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Classification of Mammals 61
© Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC NOT FORCHAPTER SALE OR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION Classification © Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC 4 NOT FORof SALE MammalsOR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION © Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC NOT FOR SALE OR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION © Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC NOT FOR SALE OR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION © Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC NOT FOR SALE OR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION © Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC NOT FOR SALE OR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION © Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC NOT FOR SALE OR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION © Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC NOT FOR SALE OR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION © Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC NOT FOR SALE OR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION © Jones & Bartlett Learning, LLC © Jones & Bartlett Learning, LLC NOT FOR SALE OR DISTRIBUTION NOT FOR SALE OR DISTRIBUTION © Jones & Bartlett Learning, LLC. NOT FOR SALE OR DISTRIBUTION. 2ND PAGES 9781284032093_CH04_0060.indd 60 8/28/13 12:08 PM CHAPTER 4: Classification of Mammals 61 © Jones Despite& Bartlett their Learning,remarkable success, LLC mammals are much less© Jones stress & onBartlett the taxonomic Learning, aspect LLCof mammalogy, but rather as diverse than are most invertebrate groups. This is probably an attempt to provide students with sufficient information NOT FOR SALE OR DISTRIBUTION NOT FORattributable SALE OR to theirDISTRIBUTION far greater individual size, to the high on the various kinds of mammals to make the subsequent energy requirements of endothermy, and thus to the inabil- discussions of mammalian biology meaningful. -
The Beaver's Phylogenetic Lineage Illuminated by Retroposon Reads
www.nature.com/scientificreports OPEN The Beaver’s Phylogenetic Lineage Illuminated by Retroposon Reads Liliya Doronina1,*, Andreas Matzke1,*, Gennady Churakov1,2, Monika Stoll3, Andreas Huge3 & Jürgen Schmitz1 Received: 13 October 2016 Solving problematic phylogenetic relationships often requires high quality genome data. However, Accepted: 25 January 2017 for many organisms such data are still not available. Among rodents, the phylogenetic position of the Published: 03 March 2017 beaver has always attracted special interest. The arrangement of the beaver’s masseter (jaw-closer) muscle once suggested a strong affinity to some sciurid rodents (e.g., squirrels), placing them in the Sciuromorpha suborder. Modern molecular data, however, suggested a closer relationship of beaver to the representatives of the mouse-related clade, but significant data from virtually homoplasy- free markers (for example retroposon insertions) for the exact position of the beaver have not been available. We derived a gross genome assembly from deposited genomic Illumina paired-end reads and extracted thousands of potential phylogenetically informative retroposon markers using the new bioinformatics coordinate extractor fastCOEX, enabling us to evaluate different hypotheses for the phylogenetic position of the beaver. Comparative results provided significant support for a clear relationship between beavers (Castoridae) and kangaroo rat-related species (Geomyoidea) (p < 0.0015, six markers, no conflicting data) within a significantly supported mouse-related clade (including Myodonta, Anomaluromorpha, and Castorimorpha) (p < 0.0015, six markers, no conflicting data). Most of an organism’s phylogenetic history is fossilized in their heritable genomic material. Using data from genome sequencing projects, particularly informative regions of this material can be extracted in sufficient num- bers to resolve the deepest history of speciation. -
Rock Hyraxes (Procavia Capensis) and Their Environments
Rock Hyraxes (Procavia capensis) and Their Environments: 13 15 δ Ccollagen and δ Ncollagen as environmental indicators Lesa la Grange Supervised by Dr Deano Stynder and Prof Judith Sealy University of Cape Town Dissertation submitted in fulfilment of the requirements for the degree of Master of Philosophy (MPhil) in Archaeology Department of Archaeology University of Cape Town 20 July 2015 The copyright of this thesis vests in the author. No quotation from it or information derived from it is to be published without full acknowledgement of the source. The thesis is to be used for private study or non- commercial research purposes only. Published by the University of Cape Town (UCT) in terms of the non-exclusive license granted to UCT by the author. University of Cape Town Abstract Rock hyraxes (Procavia capensis) are a common component of faunal assemblages at South African archaeological sites. Previous studies have focused on their remains as proxies for aspects of diet and mobility in prehistoric human populations. They have also been recognized as valuable palaeoenvironmental indicators due to the fact that their stratified communal middens record shifts in stable isotopes, palynology, and molecular biomarkers that appear to reflect environmental change. Previous studies conducted in east Africa have concluded that rock hyraxes are preferential grazers. There is comparatively little evidence, however, for the dietary preference of South African rock hyraxes, although it has been suggested that they consume more browse. This research aims to quantify the carbon isotopic ratios in their bone collagen to reconstruct diet. Results support preferential browsing in South African rock hyraxes, with a mean δ13C value for all animals in this study of -20.3 ± 1.9‰ (n = 210) indicating a C3 dietary contribution of 73.4 ± 13.3%. -
Multiple Molecular Evidences for a Living Mammalian Fossil
Multiple molecular evidences for a living mammalian fossil Dorothe´ e Huchon†‡, Pascale Chevret§¶, Ursula Jordanʈ, C. William Kilpatrick††, Vincent Ranwez§, Paulina D. Jenkins‡‡, Ju¨ rgen Brosiusʈ, and Ju¨ rgen Schmitz‡ʈ †Department of Zoology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel; §Department of Paleontology, Phylogeny, and Paleobiology, Institut des Sciences de l’Evolution, cc064, Universite´Montpellier II, Place E. Bataillon, 34095 Montpellier Cedex 5, France; ʈInstitute of Experimental Pathology, University of Mu¨nster, D-48149 Mu¨nster, Germany; ††Department of Biology, University of Vermont, Burlington, VT 05405-0086; and ‡‡Department of Zoology, The Natural History Museum, London SW7 5BD, United Kingdom Edited by Francisco J. Ayala, University of California, Irvine, CA, and approved March 18, 2007 (received for review February 11, 2007) Laonastes aenigmamus is an enigmatic rodent first described in their classification as a diatomyid suggests that Laonastes is a 2005. Molecular and morphological data suggested that it is the living fossil and a ‘‘Lazarus taxon.’’ sole representative of a new mammalian family, the Laonastidae, The two research teams also disagreed on the taxonomic and a member of the Hystricognathi. However, the validity of this position of Laonastes. According to Jenkins et al. (2), Laonastes family is controversial because fossil-based phylogenetic analyses is either the most basal group of the hystricognaths (Fig. 2A)or suggest that Laonastes is a surviving member of the Diatomyidae, nested within the hystricognaths (Fig. 2B). According to Dawson a family considered to have been extinct for 11 million years. et al. (3), Laonastes and the other Diatomyidae are the sister According to these data, Laonastes and Diatomyidae are the sister clade of the family Ctenodactylidae (i.e., gundies), a family that clade of extant Ctenodactylidae (i.e., gundies) and do not belong does not belong to the Hystricognathi, but to which it is to the Hystricognathi. -
Animal Health Requirements for Importation of Rodents, Hedgehogs, Gymnures and Tenrecs Into Denmark
INTERNATIONAL TRADE DIVISION ANIMAL HEALTH REQUIREMENTS FOR IMPORTATION OF RODENTS, HEDGEHOGS, GYMNURES AND TENRECS INTO DENMARK. La 23,0-2111 These animal health requirements concern veterinary import requirements and certification re- quirements alone and shall apply without prejudice to other Danish and EU legislation. Rodents, hedgehogs, gymnures and tenrecs meaning animals of the Genera/Species listed below: Order Family Rodentia Sciuridae (Squirrels) (except Petaurista spp., Biswamoyopterus spp., Aeromys spp., Eupetaurus spp., Pteromys spp., Glaucomys spp., Eoglaucomys spp., Hylopetes spp., Petinomys spp., Aeretes spp., Trogopterus spp., Belomys, Pteromyscus spp., Petaurillus spp., Iomys spp.), Gliridae (Dormous’), Heteromyidae (Kangaroo rats, kangaroo mice and rock pocket mice), Geomyidae (Gophers), Spalaci- dae (Blind mole rats, bamboo rats, root rats, and zokors), Calomyscidae (Mouse-like hamsters), Ne- somyidae (Malagasy rats and mice, climbing mice, African rock mice, swamp mice, pouched rats, and the white-tailed rat), Cricetidae (Hamsters, voles, lemmings, and New World rats and mice), Muridae (mice and rats and gerbils), Dipodidae (jerboas, jumping mice, and birch mice), Pedetidae (Spring- hare), Ctenodactylidae (Gundis), Diatomyidae (Laotian rock rat), Petromuridae (Dassie Rat), Thryon- omyidae (Cane rats), Bathyergidae (Blesmols), Dasyproctidae (Agoutis and acouchis), Agoutidae (Pacas), Dinomyidae (Pacarana), Caviidae (Domestic guinea pig, wild cavies, mara and capybara), Octodontidae (Rock rats, degus, coruros, and viscacha rats), Ctenomyidae (Tuco-tucos), Echimyidae (Spiny rats), Myocastoridae (Coypu ), Capromyidae (Hutias), Chinchillidae (Chinchillas and visca- chas), Abrocomidae (Chinchilla rats). Erinaceomorpha Erinaceidae (Hedgehogs and gymnures) Afrosoricida Tenrecidae (Tenrecs) The importation of rodents, hedgehogs, gymnures and tenrecs to Denmark (excluding import to ap- proved bodies, institutes and centres as defined in Art. 2, 1, (c) of Directive 92/65/EEC) must comply with the requirements of Danish order no. -
INSIGHTS INTO RELATIONSHIPS AMONG RODENT LINEAGES BASED on MITOCHONDRIAL GENOME SEQUENCE DATA a Dissertation by LAURENCE JOHN FR
INSIGHTS INTO RELATIONSHIPS AMONG RODENT LINEAGES BASED ON MITOCHONDRIAL GENOME SEQUENCE DATA A Dissertation by LAURENCE JOHN FRABOTTA Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY December 2005 Major Subject: Zoology INSIGHTS INTO RELATIONSHIPS AMONG RODENT LINEAGES BASED ON MITOCHONDRIAL GENOME SEQUENCE DATA A Dissertation by LAURENCE JOHN FRABOTTA Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Approved by: Chair of Committee, Rodney L. Honeycutt Committee Members, James B. Woolley John W. Bickham James R. Manhart Head of Department, Vincent M. Cassone December 2005 Major Subject: Zoology iii ABSTRACT Insights into Relationships among Rodent Lineages Based on Mitochondrial Genome Sequence Data. (December 2005) Laurence John Frabotta, B.S.; M.S., California State University, Long Beach Chair of Advisory Committee: Dr. Rodney L. Honeycutt This dissertation has two major sections. In Chapter II, complete mitochondrial (mt DNA) genome sequences were used to construct a hypothesis for affinities of most major lineages of rodents that arose quickly in the Eocene and were well established by the end of the Oligocene. Determining the relationships among extant members of such old lineages can be difficult. Two traditional schemes on subordinal classification of rodents have persisted for over a century, dividing rodents into either two or three suborders, with relationships among families or superfamilies remaining problematic. The mtDNA sequences for four new rodent taxa (Aplodontia, Cratogeomys, Erethizon, and Hystrix), along with previously published Euarchontoglires taxa, were analyzed under parsimony, likelihood, and Bayesian criteria. -
Northern Cape Provincial Gazette Vol 15 No
·.:.:-:-:-:-:.::p.=~==~ ::;:;:;:;:::::t}:::::::;:;:::;:;:;:;:;:;:;:;:;:;:::::;:::;:;:.-:-:.:-:.::::::::::::::::::::::::::-:::-:-:-:-: ..........•............:- ;.:.:.;.;.;.•.;. ::::;:;::;:;:;:;:;:;:;:;:;;:::::. '.' ::: .... , ..:. ::::::::::::::::::::~:~~~~::::r~~~~\~:~ i~ftfj~i!!!J~?!I~~~~I;Ii!!!J!t@tiit):fiftiIit\t~r\t ', : :.;.:.:.:.:.: ::;:;:::::;:::::::::::;:::::::::.::::;:::::::;:::::::::;:;:::;:;:;:;:: :.:.:.: :.:. ::~:}:::::::::::::::::::::: :::::::::::::::::::::tf~:::::::::::::::: ;:::;:::;:::;:;:;:::::::::;:;:::::: ::::::;::;:;:;:;=;:;:;:;:;:::;:;:;::::::::;:.: :.;.:.:.;.;.:.;.:.:-:.;.: :::;:' """"~'"W" ;~!~!"IIIIIII ::::::::::;:::::;:;:;:::;:::;:;:;:;:;:::::..;:;:;:::;: 1111.iiiiiiiiiiii!fillimiDw"""'8m\r~i~ii~:i:] :.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:':.:.:.::::::::::::::{::::::::::::;:: ;.;:;:;:;:t;:;~:~;j~Ij~j~)~( ......................: ;.: :.:.:.;.:.;.;.;.;.:.:.:.;.;.:.;.;.;.;.:.;.;.:.;.;.:.; :.:.;.:.: ':;:::::::::::-:.::::::;:::::;;::::::::::::: EXTRAORDINARY • BUITENGEWONE Provincial Gazette iGazethi YePhondo Kasete ya Profensi Provinsiale Koerant Vol. 15 KIMBERLEY, 19 DECEMBER 2008 DESEMBER No. 1258 PROVINCE OF THE NORTHERN CAPE 2 No. 1258 PROVINCIAL GAZETTE EXTRAORDINARY, 19 DECEMBER 2008 CONTENTS • INHOUD Page Gazette No. No. No. GENERAL NOTICE· ALGEMENE KENNISGEWING 105 Northern Cape Nature Conservation Bill, 2009: For public comment . 3 1258 105 Noord-Kaap Natuurbewaringswetontwerp, 2009: Vir openbare kommentaar . 3 1258 PROVINSIE NOORD-KAAP BUITENGEWONE PROVINSIALE KOERANT, 19 DESEMBER 2008 No.1258 3 GENERAL NOTICE NOTICE -
The Naked Mole-Rat As an Animal Model in Biomedical Research: Current Perspectives
Open Access Animal Physiology Dovepress open access to scientific and medical research Open Access Full Text Article REVIEW The naked mole-rat as an animal model in biomedical research: current perspectives Laura-Nadine Schuhmacher Abstract: The naked mole-rat (NMR) is a subterranean rodent that has gained significant Zoé Husson attention from the biomedical research community in recent years as molecular mechanisms Ewan St. John Smith underlying its unusual biology start to be unraveled. With very low external mortality, NMRs have an unusually long lifespan while showing no signs of aging, such as neuro- Department of Pharmacology, University of Cambridge, Cambridge, UK degeneration or cancer. Furthermore, living underground in large colonies (100 to 300 animals), results in comparatively high carbon dioxide and low oxygen levels, from which NMRs have evolved extreme resistance to both hypoxia and hypercapnia. In this paper we have summarized the latest developments in NMR research and its impact on biomedical research, with the aim of providing a sound background that will inform and inspire further For personal use only. investigations. Keywords: naked mole-rat, longevity, cancer, hypoxia, nociception, pain Introduction The naked mole-rat (NMR) (Heterocephalus glaber) is a subterranean mammal, which has recently gained interest from scientists across a variety of research fields. Unlike the majority of mammals, NMRs are poikilothermic and eusocial, ie, are cold-blooded and have a single breeding female within a colony.1 In addition to these features, which have limited biomedical translatability, NMRs have also evolved several physiological adaptations to habituate to their extreme environmental conditions, which have led researchers to study this mammal with the hypothesis Open Access Animal Physiology downloaded from https://www.dovepress.com/ by 131.111.184.102 on 07-Sep-2017 that by understanding the extreme biology of NMRs, more will be understood about normal mammalian physiology. -
Micheal L. Dent Richard R. Fay Arthur N. Popper Editors Rodent Bioacoustics Springer Handbook of Auditory Research
Springer Handbook of Auditory Research Micheal L. Dent Richard R. Fay Arthur N. Popper Editors Rodent Bioacoustics Springer Handbook of Auditory Research Volume 67 Series Editor Richard R. Fay, Ph.D., Loyola University Chicago, Chicago, IL, USA Arthur N. Popper, Ph.D., University of Maryland, College Park, MD, USA Editorial Board Karen Avraham, Ph.D., Tel Aviv University, Israel Andrew Bass, Ph.D., Cornell University Lisa Cunningham, Ph.D., National Institutes of Health Bernd Fritzsch, Ph.D., University of Iowa Andrew Groves, Ph.D., Baylor University Ronna Hertzano, M.D., Ph.D., School of Medicine, University of Maryland Colleen Le Prell, Ph.D., University of Texas, Dallas Ruth Litovsky, Ph.D., University of Wisconsin Paul Manis, Ph.D., University of North Carolina Geoffrey Manley, Ph.D., University of Oldenburg, Germany Brian Moore, Ph.D., Cambridge University, UK Andrea Simmons, Ph.D., Brown University William Yost, Ph.D., Arizona State University More information about this series at http://www.springer.com/series/2506 The ASA Press The ASA Press imprint represents a collaboration between the Acoustical Society of America and Springer dedicated to encouraging the publication of important new books in acoustics. Published titles are intended to reflect the full range of research in acoustics. ASA Press books can include all types of books published by Springer and may appear in any appropriate Springer book series. Editorial Board Mark F. Hamilton (Chair), University of Texas at Austin James Cottingham, Coe College Diana Deutsch, University of California, San Diego Timothy F. Duda, Woods Hole Oceanographic Institution Robin Glosemeyer Petrone, Threshold Acoustics William M. -
Northern Cape Provincial Gazette Vol 17 No 1374 Dated 21 January 2010
'. .' :.-,', : : .: ::: ; : : : : :: : .: .... : : ::::: : .;.;.; ; :: :.: :.;.:.:: : : .:. :::: : : ::: : :·j?+~:n·· ~r'~'; :i' ; :: ; ~: :;:;:; :: : : :: .. ::: -, : .. ; : ; : : : : : : :'. :::: :: EXTRAO RDINA RY • BUITENGEWONE . ProvinciaI Gazette iGazethI YePh0 nd 0 Kasete ya Profe ns i Provins iaIe Koerant JANUARY Vol. 17 KIMBERLEY, 21 JANUARIE ~W1 0 No. 1374 PROVINCE OF THE NORTHERN CAPE 2 No. 1374 PROVINCIAL GAZETTE EXTRAORDINARY, 21 JANUARY 2010 IMPORTANT NOTICE The Government Printing Works will not be held responsible for faxed documents not received due to errors on the fax machine or faxes received which are unclear or incomplete. Please be advised that an "OK" slip, received from a fax machine, will not be accepted as proof that documents were received by the GPW for printing. If documents are faxed to the GPW it will be the sender's respon sibility to phone and confirm that the documents were received in good order. Furthermore the Government Printing Works will also not be held responsible for cancellations and amendments which have not been done on original documents received from clients. CONTENTS -INHOUD Page Gazette No. No. No. PREMIER'S NOTICE 1 Northern Cape Nature Conservation Act (9/2009): For general information . 3 1374 PROVINSIE NOORD-KAAP BUITENGEWONE PROVINSIALE KOERANT, 21 JANUARIE 2010 No.1374 3 PREMIER'S NOTICE No.1 21 January 2010 OFFICE OF THE PREMIER It is hereby notified that the Premier has assented to the following Act which is hereby published for general information. This Act comes into operation on a date fixed by the Premier by Proclamation in the Provincial Gazette. No.9 of 2009: Northern Cape Nature Conservation A(:t, 2009 PROVINCE OF THE NORTHERN CAPE 4 No. -
Phylogenetic Relationships and Divergence Times in Rodents Based on Both Genes and Fossils Ryan Norris University of Vermont
University of Vermont ScholarWorks @ UVM Graduate College Dissertations and Theses Dissertations and Theses 2009 Phylogenetic Relationships and Divergence Times in Rodents Based on Both Genes and Fossils Ryan Norris University of Vermont Follow this and additional works at: https://scholarworks.uvm.edu/graddis Recommended Citation Norris, Ryan, "Phylogenetic Relationships and Divergence Times in Rodents Based on Both Genes and Fossils" (2009). Graduate College Dissertations and Theses. 164. https://scholarworks.uvm.edu/graddis/164 This Dissertation is brought to you for free and open access by the Dissertations and Theses at ScholarWorks @ UVM. It has been accepted for inclusion in Graduate College Dissertations and Theses by an authorized administrator of ScholarWorks @ UVM. For more information, please contact [email protected]. PHYLOGENETIC RELATIONSHIPS AND DIVERGENCE TIMES IN RODENTS BASED ON BOTH GENES AND FOSSILS A Dissertation Presented by Ryan W. Norris to The Faculty of the Graduate College of The University of Vermont In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy Specializing in Biology February, 2009 Accepted by the Faculty of the Graduate College, The University of Vermont, in partial fulfillment of the requirements for the degree of Doctor of Philosophy, specializing in Biology. Dissertation ~xaminationCommittee: w %amB( Advisor 6.William ~il~atrickph.~. Duane A. Schlitter, Ph.D. Chairperson Vice President for Research and Dean of Graduate Studies Date: October 24, 2008 Abstract Molecular and paleontological approaches have produced extremely different estimates for divergence times among orders of placental mammals and within rodents with molecular studies suggesting a much older date than fossils. We evaluated the conflict between the fossil record and molecular data and find a significant correlation between dates estimated by fossils and relative branch lengths, suggesting that molecular data agree with the fossil record regarding divergence times in rodents. -
A Classification of Recent Mammals
A CLASSIFICATION OF RECENT MAMMALS ClassifiCation Common name(s) ClassifiCation Common name(s) subclass Prototheria Order Scandentia (20 species) Order Monotremata (5 species) Family Tupaiidae...................Tree shrews Family Tachyglossidae ...........Echidnas, spiny anteaters Ptilocercidae ..................Pen-tailed tree shrew Ornithorhynchidae .........Duck-billed platypus Order Dermoptera (2 species) subclass theria Family Cynocephalidae .........Colugos Infraclass Metatheria (Marsupialia) Order Primates (376 species) Order Didelphimorphia (87 species) Family Cheirogaleidae ...........Dwarf lemurs Family Didelphidae ..............Opossums Lemuridae......................Lemurs Order Paucituberculata (6 species) Lepilemuridae ................Sportive lemurs Family Caenolestidae ............Rat opossums Indriidae ........................Wooly lemurs, sifakas, indri Order Microbiotheria (1 species) Daubentoniidae .............Aye-aye Family Microbiotheriidae ......Monito del monte, llaca Lorisidae ........................Lorises, pottos Order Notoryctemorphia (2 species) Galagidae .......................Bushbabies, Galagos Family Notoryctidae .............Marsupial “mole” Tarsiidae .........................Tarsiers Order Dasyuromorphia (71 species) Cebidae .........................New World monkeys Family Thylacinidae ..............Thylacine (extinct) Aotidae ..........................Night monkeys Myrmecobiidae ..............Numbat Pitheciidae .....................Titi, uracari, saki monkeys Dasyuridae .....................Dasyures,