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A Comprehensive Multilocus Phylogeny of the Neotropical Cotingas
Molecular Phylogenetics and Evolution 81 (2014) 120–136 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A comprehensive multilocus phylogeny of the Neotropical cotingas (Cotingidae, Aves) with a comparative evolutionary analysis of breeding system and plumage dimorphism and a revised phylogenetic classification ⇑ Jacob S. Berv 1, Richard O. Prum Department of Ecology and Evolutionary Biology and Peabody Museum of Natural History, Yale University, P.O. Box 208105, New Haven, CT 06520, USA article info abstract Article history: The Neotropical cotingas (Cotingidae: Aves) are a group of passerine birds that are characterized by Received 18 April 2014 extreme diversity in morphology, ecology, breeding system, and behavior. Here, we present a compre- Revised 24 July 2014 hensive phylogeny of the Neotropical cotingas based on six nuclear and mitochondrial loci (7500 bp) Accepted 6 September 2014 for a sample of 61 cotinga species in all 25 genera, and 22 species of suboscine outgroups. Our taxon sam- Available online 16 September 2014 ple more than doubles the number of cotinga species studied in previous analyses, and allows us to test the monophyly of the cotingas as well as their intrageneric relationships with high resolution. We ana- Keywords: lyze our genetic data using a Bayesian species tree method, and concatenated Bayesian and maximum Phylogenetics likelihood methods, and present a highly supported phylogenetic hypothesis. We confirm the monophyly Bayesian inference Species-tree of the cotingas, and present the first phylogenetic evidence for the relationships of Phibalura flavirostris as Sexual selection the sister group to Ampelion and Doliornis, and the paraphyly of Lipaugus with respect to Tijuca. -
Nest Architecture and Placement of Three Manakin Species in Lowland Ecuador José R
Cotinga29-080304.qxp 3/4/2008 10:42 AM Page 57 Cotinga 29 Nest architecture and placement of three manakin species in lowland Ecuador José R. Hidalgo, Thomas B. Ryder, Wendy P. Tori, Renata Durães, John G. Blake and Bette A. Loiselle Received 14 July 2007; final revision accepted 24 September 2007 Cotinga 29 (2008): 57–61 El conocimiento sobre los hábitat de reproducción de muchas especies tropicales es limitado. En particular, la biología de anidación de varias especies de la familia Pipridae, conocida por sus carac- terísticos despliegues de machos en asambleas de cortejo, es poco conocida. Aquí proporcionamos descripciones y comparamos la arquitectura de nidos y lugares de anidación utilizados por tres especies de saltarines: Saltarín Cola de Alambre Pipra filicauda,Saltarín Coroniblanco P. pipra y Saltarín Coroniazul Lepidothrix coronata,presentes en la Amazonia baja del Ecuador.Encontramos 76 nidos de P. filicauda,13 nidos de P. pipra y 41 nidos de L. coronata.Los resultados indican que P. filicauda y L. coronata usan hábitat similares para anidar (flancos o crestas de quebradas pequeñas), mientras que P. pipra tiende a anidar en sitios relativamente abiertos rodeados por sotobosque más denso. Las tres especies construyen nidos pequeños, poco profundos, los cuales, a pesar de ser similares, son distinguibles debido a sus componentes estructurales y características de ubicación. Este estudio contribuye a nuestro conocimiento sobre los hábitos de anidación de la avifauna tropical. Manakins (Pipridae) are widespread throughout Guiana16,and L. coronata from Central America13). warm and humid regions of Central and South There is no published information, however, on the America4,10,14,but reach their greatest diversity in nesting biology of these three species in Ecuador lowland Amazonia where up to eight species may and, due to observed geographic variation, such occur in sympatry1,4,14.Manakins are small, data are valuable. -
The Birds of Hacienda Palo Verde, Guanacaste, Costa Rica
The Birds of Hacienda Palo Verde, Guanacaste, Costa Rica PAUL SLUD SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 292 SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of "diffusing knowledge" was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoo/ogy Smithsonian Studies in Air and Space Smithsonian Studies in History and Technology In these series, the Institution publishes small papers and full-scale monographs that report the research and collections of its various museums and bureaux or of professional colleagues in the world cf science and scholarship. The publications are distributed by mailing lists to libraries, universities, and similar institutions throughout the world. Papers or monographs submitted for series publication are received by the Smithsonian Institution Press, subject to its own review for format and style, only through departments of the various Smithsonian museums or bureaux, where the manuscripts are given substantive review. Press requirements for manuscript and art preparation are outlined on the inside back cover. -
Collation of Brisson's Genera of Birds with Those of Linnaeus
59. 82:01 Article XXVII. COLLATION OF BRISSON'S GENERA OF BIRDS WITH THOSE OF LINNAEUS. BY J. A. ALLEN. CONTENTS. Page. Introduction ....................... 317 Brisson not greatly indebted to Linnaeus. 319 Linneus's indebtedness to Brisson .... .. ... .. 320 Brisson's methods and resources . .. 320 Brisson's genera . 322 Brisson and Linnaeus statistically compared .. .. .. 324 Brisson's 'Ornithologia' compared with the Aves of the tenth edition of Lin- naeus's 'Systema'. 325 Brisson's new genera and their Linnwan equivalents . 327 Brisson's new names for Linnaan genera . 330 Linnaean (1764 and 1766) new names for Brissonian genera . 330 Brissonian names adopted. by Linnaeus . 330 Brissonian names wrongly ascribed to other authors in Sharpe's 'Handlist of Birds'.330 The relation of six Brissonian genera to Linnlean genera . 332 Mergus Linn. and Merganser Briss. 332 Meleagris Linn. and Gallopavo Briss. 332 Alcedo Linn. and Ispida Briss... .. 332 Cotinga Briss. and Ampelis Linn. .. 333 Coracias Linn. and Galgulus Briss.. 333 Tangara Briss. and Tanagra Linn... ... 334 INTRODUCTION. In considering recently certain questions of ornithological nomenclature it became necessary to examine the works of Brisson and Linnaeus in con- siderable detail and this-examination finally led to a careful collation of Brisson's 'Ornithologia,' published in 1760, with the sixth, tenth, and twelfth editions of Linnaeus's 'Systema Naturae,' published respectively in 1748, 1758, and 1766. As every systematic ornithologist has had occasion to learn, Linnaeus's treatment of the class Aves was based on very imperfect knowledge of the suabject. As is well-known, this great systematist was primarily a botanist, secondarily a zoologist, and only incidentally a mammalogist and ornithol- ogist. -
Table of Contents 1 Experimental Design: Species Presented
SUPPLEMENTARY MATERIAL Table of contents 1 Experimental design: species presented.............................................................................................. 2 2 Information for the song and audio recordings used in the survey ................................................... 10 3 Statistical analyses and model fits .................................................................................................... 17 3.1 Disservices: mixed-effects model ............................................................................................. 17 3.2 Education: mixed-effects model ............................................................................................... 20 3.3 Birdwatching: mixed-effects model .......................................................................................... 23 3.4 Acoustic aesthetics: multinomial regression ............................................................................. 26 3.5 Identity: mixed-effects model ................................................................................................... 28 3.6 Bequest: logistic regression ...................................................................................................... 31 4 Results from the open-ended questions ............................................................................................ 34 4.1 Disservices ................................................................................................................................ 34 4.2 Birdwatching and acoustic -
Diagnóstico Socio Ambiental Y Económico De La Zona Protectora Tivives
DIAGNÓSTICO SOCIO AMBIENTAL Y ECONÓMICO DE LA ZONA PROTECTORA TIVIVES Área de Conservación Pacifico Central Sistema Nacional de Áreas de Conservación (SINAC) 2016 2016 Publicado por: SINAC. Sistema Nacional de Áreas de Conservación Donado por: Asociación Costa Rica por Siempre Elaboración técnica: Marcia Carranza Vargas, Adriana Fernández Sánchez, Marco Hidalgo Chaverri, Alexander Gonzalez Vega, Carole Brun, Karla Córdoba Brenes (Fundación Neotrópica). Consultor externo: Gabriel Ballestero (Estudio de tenencia de la tierra). Asesoría Técnica: Alfonso Duarte, Gerardo Chavarría, Francisco Jiménez, Johan Aguilar y Carolina Muñoz (ACOPAC), Marco Vinicio Araya (Secretaría Ejecutiva SINAC), Andrea Montero y Pamela Castillo (Asociación Costa Rica Por Siempre). Copyright: © 2016. Sistema Nacional de Áreas de Conservación (SINAC) Esta publicación puede citarse sin previa autorización con la condición que se mencione la fuente Citar como: SINAC (Sistema Nacional de Áreas de Conservación). 2016. Diagnóstico socioeconómico y ambiental de la Zona Protectora Tivives. Área de Conservación Pacífico Central (ACOPAC), Costa Rica. 190 p. El proceso de facilitación de este Diagnóstico socioeconómico y ambiental de la Zona Protectora Tivives, fue llevado a cabo mediante un acuerdo de donación por Costa Rica Por Siempre y fue posible gracias al apoyo técnico y financiero del Segundo Canje de Deuda por Naturaleza entre Costa Rica y Estados Unidos, la Asociación Costa Rica Por Siempre y del personal del Área de Conservación Pacífico Central (ACOPAC). La Asociación -
Attempting to See One Member of Each of the World's Bird Families Has
Attempting to see one member of each of the world’s bird families has become an increasingly popular pursuit among birders. Given that we share that aim, the two of us got together and designed what we believe is the most efficient strategy to pursue this goal. Editor’s note: Generally, the scientific names for families (e.g., Vireonidae) are capital- ized, while the English names for families (e.g., vireos) are not. In this article, however, the English names of families are capitalized for ease of recognition. The ampersand (&) is used only within the name of a family (e.g., Guans, Chachalacas, & Curassows). 8 Birder’s Guide to Listing & Taxonomy | October 2016 Sam Keith Woods Ecuador Quito, [email protected] Barnes Hualien, Taiwan [email protected] here are 234 extant bird families recognized by the eBird/ Clements checklist (2015, version 2015), which is the offi- T cial taxonomy for world lists submitted to ABA’s Listing Cen- tral. The other major taxonomic authority, the IOC World Bird List (version 5.1, 2015), lists 238 families (for differences, see Appendix 1 in the expanded online edition). While these totals may appear daunting, increasing numbers of birders are managing to see them all. In reality, save for the considerable time and money required, finding a single member of each family is mostly straightforward. In general, where family totals or family names are mentioned below, we use the eBird/Clements taxonomy unless otherwise stated. Family Feuds: How do world regions compare? In descending order, the number of bird families supported by con- tinental region are: Asia (125 Clements/124 IOC), Africa (122 Clem- ents/126 IOC), Australasia (110 Clements/112 IOC), North America (103 Clements/IOC), South America (93 Clements/94 IOC), Europe (73 Clements/74 IOC ), and Antarctica (7 Clements/IOC). -
Traces Evolution of a Mysterious Cotinga Birds 14 October 2014
New 'tree of life' traces evolution of a mysterious cotinga birds 14 October 2014 They are some of the brightest, loudest, oddest- "de-coupled" in the cotingas. looking, least-understood birds on the planet. Some have bulbous crests, long fleshy wattles, or Sexual selection appears to have played a role in Elvis-worthy pompadours in addition to electric the evolution of non-plumage gender differences in blue, deep purple, or screaming orange feathers. some cotinga species. But thanks to a comprehensive new evolutionary "tree of life" generated for the tropical cotinga "In one case, the Screaming Piha, the males and family of South America, the door is now open to females look alike but the male sings one of the new discoveries about the more than 60 species in loudest songs on the planet," says Yale's Rick this amazingly diverse group of birds. Prum. "That means male-female plumage difference alone is not evidence for sexual selection "Our study provides comprehensive insight into because sexual selection is also driving other traits how nearly all the cotinga species are related to such as voice and behavior." each other going all the way back to their common ancestor," says lead author Jake Berv, a Ph.D. "One of the biggest analytical differences between student in the Fuller Evolutionary Biology Lab at what we've done and past work is that we used a the Cornell Lab of Ornithology. "No previous 'species tree' approach, which is potentially more attempts to understand the evolutionary history of accurate than what is typically applied to genetic this group have included genetic samples from data," Berv says. -
“Ecology and Distribution of Endemic Birds of the Osa Peninsula”
“Ecology and distribution of endemic birds of the Osa Peninsula” Final Report for Friends of the Osa and Evergreen Foundation September 2009 Elizabeth Jones Abraham Gallo 1 Dan Lebbin Contents FOO Contract Terms ...................................................................................................................................................4 Surveys and Maps ............................................................................................................................................................... 5 Habitats. ............................................................................................................................................................................. 8 Threats and Conservation Recommendations. .................................................................................................................. 8 Evergreen Grant Contract Terms ................................................................................................................................8 Detailed account of activities .............................................................................................................................................. 9 Evaluation of accomplishments and successes .................................................................................................................. 9 Significant obstacles encountered, ................................................................................................................................... 10 Recommendations -
Cerro Blanco
COTINGA 2 Cerro Blanco New and interesting records of birds from a dry forest reserve in south-west Ecuador Karl S. Berg Resum en La reserva forestal Cerro Blanco es una de las pocas áreas protegidas con más de 200 ha de bosque seco sobre el oeste ecuatoriano. Aunque existen listas de registros de aves en la reserva, con frecuencia no se conocen las fechas ni localidades en que fueron tomados. De otro lado, esta información no incluye observaciones de algunas de las partes de más difícil acceso en la reserva, ni muestra con precisión las diferentes altitudes, los tipos de bosques o las estaciones. Una información más amplia será cada vez más importante para la conservación y manejo de la vida silvestre de la reserva a medida que se intensifica la industria y la agricultura alrededor de Guayaquil, y se amenaza con aislar ecológicamente Cerro Blanco. Este artículo presenta los registros de aves para la reserva, detalles de algunas especies poco conocidas o amenazadas, y una lista actualizada de las especies del bosque. Cerro Blanco (02°10'S 80°02'W) is a protected aid of various fieldguides3,5,8,9 and were made dry tropical forest approximately 15 km west 15 to 45 days apart throughout the 10 month of Guayaquil, Guayas province, south-west period. Trails surveyed were Quebrada Canoa, Ecuador. The 2000 ha forest is at the south Buenavista, the road between the Mirador de ern end of the Cordillera de la Costa that runs los Monos and Quebrada de los Papagayos (see from the Gulf of Guayaquil, north to the prov Map). -
Avian Survey Report
Spring/Summer 2010 Avian Survey Report Stony Creek Wind Farm Wyoming County, New York January 24, 2011 PREPARED FOR: Stony Creek Energy LLC 51 Monroe St. Suite 1604 Rockville, MD 20850 PREPARED BY: Lackawanna Executive Park 239 Main Street, Suite 301 Dickson City, PA 18519 www.shoenerenvironmental.com Stony Creek Wind Farm Avian Survey January 24, 2011 Table of Contents I. Summary and Background .................................................................................................1 Summary .......................................................................................................................1 Project Description ........................................................................................................1 Project Review Background ..........................................................................................2 II. Bald Eagle Survey .............................................................................................................3 Bald Eagle Breeding Status in New York ......................................................................3 Daily Movements of Bald Eagle in New York ...............................................................4 Bald Eagle Conservation Status in New York ................................................................4 Bald Eagle Survey Method ............................................................................................5 Analysis of Bald Eagle Survey Data ..............................................................................6 -
Area De Conservación Guanacaste Costa Rica
AREA DE CONSERVACIÓN GUANACASTE COSTA RICA The Area de Conservación Guanacaste is a mosaic of national parks, forest reserves, wildlife refuges and offshore waters which protects an entire 105 km gradient from mangroves and dry forest on a coast with upwelling currents, coral colonies and reefs, to cloud forest at 2,000 metres and high level Atlantic rainforest. It has sufficient habitats, elevational and climatic, to support at least 60% of the species of Costa Rica, both now and in a warming future climate. Its Pacific tropical dry forest is the largest and best preserved left in MesoAmerica, and has several rare and endangered species. COUNTRY Costa Rica NAME Area de Conservación Guanacaste NATURAL WORLD HERITAGE SERIAL SITE 1999: Inscribed on the World Heritage List under Natural Criteria ix and x. 2004: Extended by the Santa Elena property under the same criteria. STATEMENT OF OUTSTANDING UNIVERSAL VALUE [pending] INTERNATIONAL DESIGNATIONS 1999: Laguna Respringue and Manglar de Potrero Grande designated Wetlands of International Importance under the Ramsar Convention (75 ha and 139 ha). IUCN MANAGEMENT CATEGORY Rincón de la Vieja National Park: II National Park Santa Rosa National Park: II National Park Guanacaste National Park: II National Park Bahia Junquillal National Wildlife Refuge: IV Habitat / Species Management Area Horizontes Experimental Forest Station: Unassigned BIOGEOGRAPHICAL PROVINCE Central American (8.16.1) GEOGRAPHICAL LOCATION Located in northwestern Costa Rica approximately 120 km north of Puntarenas. The site extends from the volcanic ridge of the Cordillera de Guanacaste to 6 and 12 km out to sea off the south coast of the Santa Elena peninsula.