14-3-3 Proteins Associate with Cdc25 Phosphatases DOUGLAS S

Total Page:16

File Type:pdf, Size:1020Kb

14-3-3 Proteins Associate with Cdc25 Phosphatases DOUGLAS S Proc. Natl. Acad. Sci. USA Vol. 92, pp. 7892-7896, August 1995 Cell BioIlogy 14-3-3 proteins associate with cdc25 phosphatases DOUGLAS S. CONKLIN, KONSTANTIN GALAKTIONOV, AND DAVID BEACH* Howard Hughes Medical Institute, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724 Communicated by Marc W Kirschner, Harvard Medical School, Boston, MA, May 19, 1995 ABSTRACT The cdc25 phosphatases play key roles in cell onset of mitosis by cdc2-cyclin B phosphorylation (27). Since cycle progression by activating cyclin-dependent kinases. Two cdc25C phosphatase activity stimulates cdc2 kinase activity, members of the 14-3-3 protein family have been isolated in a phosphorylation by cdc2-cyclin B may result in the formation yeast two-hybrid screen designed to identify proteins that of an auto-amplification loop with increased cdc25C activity interact with the human cdc25A and cdc25B phosphatases. further activating cdc2 kinase activity. cdc25A, which plays a Genes encoding the human homolog ofthe 14-3-3e protein and crucial role early in the cell cycle (28), has been shown to be the previously described 14-3-3f8 protein have been isolated in phosphorylated by cdk2-cyclin E at the G1/S transition (29). this screening. 14-3-3 proteins constitute a family of well- Recently, the Raf-1 protooncogene kinase has been found to conserved eukaryotic proteins that were originally isolated in form a tight complex with cdc25 phosphatases both in somatic mammalian brain preparations and that possess diverse cells and in Xenopus oocytes (30). Raf-1-dependent kinase biochemical activities related to signal transduction. We activity phosphorylates and stimulates cdc25A activity. This present evidence that indicates that cdc25 and 14-3-3 proteins constitutes a major link between mitogenic signaling and cell physically interact both in vitro and in vivo. 14-3-3 protein does cycle control. not, however, affect the phosphatase activity of cdc25A. Raf-1, To identify other potential regulators of cdc25, a yeast which is known to bind 14-3-3 proteins, has recently been two-hybrid protein interaction screening was undertaken to shown to associate with cdc25A and to stimulate its phos- identify proteins that interact with the human cdc25 phos- phatase activity. 14-3-3 protein, however, has no effect on the phatases. Two interacting clones were found to encode 14-3-3 cdc25A-kinase activity of Raf-1. Instead, 14-3-3 may facilitate isoforms.t These proteins are members of a family of proteins the association ofcdc25 with Raf-1 in vivo, participating in the that are known to associate with components of several signal linkage between mitogenic signaling and the cell cycle ma- transduction pathways, including the Raf-1 kinase cascade. chinery. This interaction is likely to play some role in linking mitogenic signaling to the regulation of cdc25 activity. In eukaryotic cells, the cyclin-dependent kinases (cdks) regu- late cellular functions critical to passage through successive phases of the cell cycle (1). The activity of these kinases is MATERIALS AND METHODS regulated both by association with ancillary proteins and by Two-Hybrid Screens. Saccharomyces cerevisiae strains HF7C phosphorylation. Foremost among cdk-associated proteins are (31) and L40 (32) were used as hosts for two-hybrid vectors. the cyclins, which function as positive regulatory subunits for HeLa cell two-hybrid cDNA libraries were gifts of G. Hannon specific members of the cdk family. Several recently described (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY). cdk inhibitors, p15 (2), p16 (3), p21 (4-6), and p27 (7, 8), also cdc25A and cdc25B were fused to the sequence encoding the physically interact with cdks. The expression of these proteins GAL4 DNA-binding domain of pGBT9. Yeast cells were increases in response to cellular damage or extracellular simultaneously transformed with GAL4 DNA-binding domain growth inhibitory signals, resulting in the inhibition of kinase (GAL4BD) fusion plasmids and GAL4 transcriptional activa- activity. tion domain (GAL4AD) fusion plasmids. Leu+ Trp+ transfor- cdk activity is also regulated by phosphorylation. Phosphor- mants, which contain both GAL4BD and GAL4AD fusion ylation of a threonine residue within the catalytic domain of plasmids, were streaked on plates with or without histidine to cdks by the cdk-activating kinase (CAK) is required for kinase determine whether the encoded proteins interacted. Yeast activity (9). Inhibitory phosphorylation of threonine and ty- cells were grown in YPD (2% glucose/2% peptone/1% yeast rosine residues in the ATP-binding site of most cdks inhibits extract) or synthetic minimal media (2% glucose/0.67% yeast kinase activity (10). These inhibitory sites are conserved nitrogen base, with appropriate auxotrophic supplements) by between fission yeast and several metazoan cdks and are found using standard techniques. Plasmids carrying sequences en- near the N termini, usually at residues Thr-14 and Tyr-15 (11). coding Ras and Raf-1 fusions (33) were gifts of L. VanAelst The phosphorylation state of Thr-14 and Tyr-15 residues of (Cold Spring Harbor Laboratory). fission yeast cdc2 is a major determinant of the onset of mitosis Binding Experiments. A fusion of maltose-binding protein and is controlled by the opposing actions of the weel/mikl (MBP) and 14-3-313 for expression in bacteria was constructed kinases and the cdc25 phosphatase (12-15). weel kinases are by removing the open reading frame from pGBT9-14-3-3,B by now known from many species (16-18) and have been shown using PCR with primers to flanking DNA. The resulting to phosphorylate Tyr-15 (12, 13). cdc25 phosphatases, al- fragment was inserted into the EcoRI and Pst I sites of though weakly related to the main family of protein phos- pBluescript KS (-) (Stratagene), producing plasmid p14-3- phatases, have been shown to specifically dephosphorylate 3KS-. In vitro translation and DNA sequence analysis con- Thr-14 and Tyr-15 (15, 19-23). Yeasts have a single cdc25 gene firmed that the wild-type 14-3-31 open reading frame had been (16, 24), whereas human cells possess three related cdc25 subcloned without the introduction of errors. The MBP-14- genes: CDC25A, -B, and -C (25, 26). The activity of the cdc25 phosphatases is also regulated by 3-3,B fusion was constructed by inserting the entire 14-3-313 phosphorylation. In human cells, cdc25C is activated at the Abbreviations: cdk, cyclin-dependent kinase; MBP, maltose-binding protein; GST, glutathione S-transferase. The publication costs of this article were defrayed in part by page charge *To whom reprint requests should be addressed. payment. This article must therefore be hereby marked "advertisement" in tThe sequence reported in this paper has been deposited in the accordance with 18 U.S.C. §1734 solely to indicate this fact. GenBank data base (accession no. U20972). Downloaded by guest on September 26, 2021 7892 Cell Biology: Conklin et al. Proc. Natl. Acad. Sci. USA 92 (1995) 7893 open reading frame into pMAL-c2 (New England Biolabs). Ag/ml, chymostatin at 1 Ag/ml, 1 mM benzamidine, and 0.5 Construction of the glutathione S-transferase (GST)-cdc25A mM phenylmethanesulfonyl fluoride). A soluble extract was fusion has been described (25). Each protein was purified on prepared by repeated passage of cells through a 26 gauge either glutathione-Sepharose or amylose-Sepharose columns needle followed by the removal of cellular debris by centrifu- by using standard procedures. Purified proteins were incu- gation. Hexahistidine-tagged human 14-3-313 was prepared bated at approximate final concentrations of 500 nM in 50 mM from insect cells infected with a baculovirus expressing the Tris-HCl, pH 7.5/150 mM NaCl/0.5% Nonidet P-40 for 30 min entire 14-3-313 protein fused in frame to the six-histidine tag on ice. Complexes were subsequently precipitated by the sequence of pAcSGHisNT-A (PharMingen). addition of 50 Al of a 1:1 slurry of glutathione-Sepharose and the above buffer. Beads were washed four times with the above buffer, heated to 95°C in sample buffer (55), and subjected to RESULTS SDS/PAGE and immunoblotting. The immunoblot was Isolation of cdc25A-Binding Proteins. A two-hybrid screen- probed with anti-MBP-antibody (New England Biolabs). ing was undertaken to identify proteins that physically interact Staphylococcal protein A coupled with horseradish peroxidase with the human cdc25 phosphatases. Human cdc25A and HRP (Amersham) and the ECL reagent (Amersham) were cdc25B genes, fused in frame to the GAL4 DNA-binding used to detect bound antibody in all immunoblots. domain vector pGBT9, were each cotransformed into yeast Immunoprecipitation and Antibody Production. HeLa cells, with a HeLa cell-derived cDNA library contained in the GAL4 grown in suspension to a density of 2 x 106 cells per ml, were transcriptional activation domain vector, pGADGH. Thirty- pelleted by centrifugation at 1000 x g for 10 min, washed three four clones interacted with the cdc25 constructs sufficiently to times with phosphate-buffered saline, and lysed in a hypotonic allow growth of the transformed host on media lacking histi- lysis buffer (10 mM Tris HCl, pH 7.5/5 mM MgCl2/25 mM dine and to express detectable levels of 13-galactosidase activ- NaF/1 mM EGTA/1 mM dithiothreitol/1 mM sodium or- ity. thovanadate containing aprotinin at 10 jig/ml, leupeptin at 10 Among these positives were two members of the 14-3-3 ,mg/ml, pepstatin at 0.5 ,ug/ml, chymostatin at 1 ,ug/ml, 1 mM family of proteins. One of 10 interaction-positive clones found benzamidine, and 0.5 mM phenylmethanesulfonyl fluoride). with cdc25A encoded the previously identified (34) 14-3-313 Soluble proteins from 1.5 x 109 cells were subjected to isoform (Fig. 1). Eight of 24 interaction-positive clones found immunoprecipitation with S jig of affinity-purified anti-14- with cdc25B encoded the human homolog of the mouse 3-33 antibody, anti-cdc25A antibody, or preimmune rabbit 14-3-3E isoform (35).
Recommended publications
  • Hidden Targets in RAF Signalling Pathways to Block Oncogenic RAS Signalling
    G C A T T A C G G C A T genes Review Hidden Targets in RAF Signalling Pathways to Block Oncogenic RAS Signalling Aoife A. Nolan 1, Nourhan K. Aboud 1, Walter Kolch 1,2,* and David Matallanas 1,* 1 Systems Biology Ireland, School of Medicine, University College Dublin, Belfield, Dublin 4, Ireland; [email protected] (A.A.N.); [email protected] (N.K.A.) 2 Conway Institute of Biomolecular & Biomedical Research, University College Dublin, Belfield, Dublin 4, Ireland * Correspondence: [email protected] (W.K.); [email protected] (D.M.) Abstract: Oncogenic RAS (Rat sarcoma) mutations drive more than half of human cancers, and RAS inhibition is the holy grail of oncology. Thirty years of relentless efforts and harsh disappointments have taught us about the intricacies of oncogenic RAS signalling that allow us to now get a pharma- cological grip on this elusive protein. The inhibition of effector pathways, such as the RAF-MEK-ERK pathway, has largely proven disappointing. Thus far, most of these efforts were aimed at blocking the activation of ERK. Here, we discuss RAF-dependent pathways that are regulated through RAF functions independent of catalytic activity and their potential role as targets to block oncogenic RAS signalling. We focus on the now well documented roles of RAF kinase-independent functions in apoptosis, cell cycle progression and cell migration. Keywords: RAF kinase-independent; RAS; MST2; ASK; PLK; RHO-α; apoptosis; cell cycle; cancer therapy Citation: Nolan, A.A.; Aboud, N.K.; Kolch, W.; Matallanas, D. Hidden Targets in RAF Signalling Pathways to Block Oncogenic RAS Signalling.
    [Show full text]
  • Product Data Sheet
    Product Data Sheet ExProfileTM Human AMPK Signaling Related Gene qPCR Array For focused group profiling of human AMPK signaling genes expression Cat. No. QG004-A (4 x 96-well plate, Format A) Cat. No. QG004-B (4 x 96-well plate, Format B) Cat. No. QG004-C (4 x 96-well plate, Format C) Cat. No. QG004-D (4 x 96-well plate, Format D) Cat. No. QG004-E (4 x 96-well plate, Format E) Plates available individually or as a set of 6. Each set contains 336 unique gene primer pairs deposited in one 96-well plate. Introduction The ExProfile human AMPK signaling related gene qPCR array profiles the expression of 336 human genes related to AMPK-mediated signal transduction. These genes are carefully chosen for their close pathway correlation based on a thorough literature search of peer-reviewed publications, mainly including genes that encode AMP-activated protein kinase complex,its regulators and targets involved in many important biological processes, such as glucose uptake, β-oxidation of fatty acids and modulation of insulin secretion. This array allows researchers to study the pathway-related genes to gain understanding of their roles in the different biological processes. QG004 plate 01: 84 unique gene PCR primer pairs QG004 plate 02: 84 unique gene PCR primer pairs QG004 plate 03: 84 unique gene PCR primer pairs QG004 plate 04: 84 unique gene PCR primer pairs Shipping and storage condition Shipped at room temperate Stable for at least 6 months when stored at -20°C Array format GeneCopoeia provides five qPCR array formats (A, B, C, D, and E) suitable for use with the following real- time cyclers.
    [Show full text]
  • (Continued) Linkage Mapping and Polymorphisms
    Inborn Errors of Metabolism (continued) 965 966 Re-institution of dietary treatment in a PKU adult patient: cdinical and MRI Common point mutations in four patients with the late infantile form of improvement after one yer. (( E. Z h, A. Morronel, M.A DonatiI, E. galosialidosis. ((X.Y. Zhoul6, R. Willemsen2, N. Gillemans', A. Morroe3, Psquni', C Fonda2.)) 'Dept. of Pediatrica, University of Florence and 2Unit of P. Strisciuglo', G. Andria4, D.A. Applegarths and A. d'Azlzo.)) 'Dept. of Neuroradlology, Prato, Italy. Intro by: Luciano Felicetti Cell Biology and 2Clinical Genetics, Erasmus University, Rotterdam, The Retrospective and prospective studies Indicate deteroration of cognition and Netherlands; 3Dept. of Pediatrics, University of Florence, Italy; 'Dept. of neurpsyololcal performance in some PKU patients after treatment Pediatrics, University of Naples, Italy; and Dept. of Pediatrics, University of withdrawL. We report the results ofrestitution ofdiet low in pbenylalanine in Britiach Columbia, Vancouver, Canada. Intro. by E.F. Neufeld. a adult PKU patient with progreulve demyelinating clopathy. The dia of classical PKU was made at age of 4 years and d Uatment was Galactosialidosis is a lysosomal storage disorder caused by mutations in the sarted At 11 years the therapy was stopped: he was able to walk alone, to run, gene encoding the protective protein/cathepsin A. Patienta with the late to cycle, to climb stairs, to write. Since the age of 19 years be had seizures. At 21 infantile phenotype differ from early infantile or juvenile/adult types in that yeas he showed weakness, stiffness, dysarthria, difficulty in gait and swallowing. they have a better prognosis and no mental retration We have analyzed four Later ewas wheelchair-bound and his mother noted gradual deterioration in these his perforannce and behaviour.
    [Show full text]
  • Drosophila and Human Transcriptomic Data Mining Provides Evidence for Therapeutic
    Drosophila and human transcriptomic data mining provides evidence for therapeutic mechanism of pentylenetetrazole in Down syndrome Author Abhay Sharma Institute of Genomics and Integrative Biology Council of Scientific and Industrial Research Delhi University Campus, Mall Road Delhi 110007, India Tel: +91-11-27666156, Fax: +91-11-27662407 Email: [email protected] Nature Precedings : hdl:10101/npre.2010.4330.1 Posted 5 Apr 2010 Running head: Pentylenetetrazole mechanism in Down syndrome 1 Abstract Pentylenetetrazole (PTZ) has recently been found to ameliorate cognitive impairment in rodent models of Down syndrome (DS). The mechanism underlying PTZ’s therapeutic effect is however not clear. Microarray profiling has previously reported differential expression of genes in DS. No mammalian transcriptomic data on PTZ treatment however exists. Nevertheless, a Drosophila model inspired by rodent models of PTZ induced kindling plasticity has recently been described. Microarray profiling has shown PTZ’s downregulatory effect on gene expression in fly heads. In a comparative transcriptomics approach, I have analyzed the available microarray data in order to identify potential mechanism of PTZ action in DS. I find that transcriptomic correlates of chronic PTZ in Drosophila and DS counteract each other. A significant enrichment is observed between PTZ downregulated and DS upregulated genes, and a significant depletion between PTZ downregulated and DS dowwnregulated genes. Further, the common genes in PTZ Nature Precedings : hdl:10101/npre.2010.4330.1 Posted 5 Apr 2010 downregulated and DS upregulated sets show enrichment for MAP kinase pathway. My analysis suggests that downregulation of MAP kinase pathway may mediate therapeutic effect of PTZ in DS. Existing evidence implicating MAP kinase pathway in DS supports this observation.
    [Show full text]
  • Inhibition of ERK 1/2 Kinases Prevents Tendon Matrix Breakdown Ulrich Blache1,2,3, Stefania L
    www.nature.com/scientificreports OPEN Inhibition of ERK 1/2 kinases prevents tendon matrix breakdown Ulrich Blache1,2,3, Stefania L. Wunderli1,2,3, Amro A. Hussien1,2, Tino Stauber1,2, Gabriel Flückiger1,2, Maja Bollhalder1,2, Barbara Niederöst1,2, Sandro F. Fucentese1 & Jess G. Snedeker1,2* Tendon extracellular matrix (ECM) mechanical unloading results in tissue degradation and breakdown, with niche-dependent cellular stress directing proteolytic degradation of tendon. Here, we show that the extracellular-signal regulated kinase (ERK) pathway is central in tendon degradation of load-deprived tissue explants. We show that ERK 1/2 are highly phosphorylated in mechanically unloaded tendon fascicles in a vascular niche-dependent manner. Pharmacological inhibition of ERK 1/2 abolishes the induction of ECM catabolic gene expression (MMPs) and fully prevents loss of mechanical properties. Moreover, ERK 1/2 inhibition in unloaded tendon fascicles suppresses features of pathological tissue remodeling such as collagen type 3 matrix switch and the induction of the pro-fbrotic cytokine interleukin 11. This work demonstrates ERK signaling as a central checkpoint to trigger tendon matrix degradation and remodeling using load-deprived tissue explants. Tendon is a musculoskeletal tissue that transmits muscle force to bone. To accomplish its biomechanical function, tendon tissues adopt a specialized extracellular matrix (ECM) structure1. Te load-bearing tendon compart- ment consists of highly aligned collagen-rich fascicles that are interspersed with tendon stromal cells. Tendon is a mechanosensitive tissue whereby physiological mechanical loading is vital for maintaining tendon archi- tecture and homeostasis2. Mechanical unloading of the tissue, for instance following tendon rupture or more localized micro trauma, leads to proteolytic breakdown of the tissue with severe deterioration of both structural and mechanical properties3–5.
    [Show full text]
  • ARAF Acts As a Scaffold to Stabilize BRAF:CRAF Heterodimers
    Oncogene (2013) 32, 3207–3212 & 2013 Macmillan Publishers Limited All rights reserved 0950-9232/13 www.nature.com/onc SHORT COMMUNICATION ARAF acts as a scaffold to stabilize BRAF:CRAF heterodimers AP Rebocho1,2 and R Marais1,3 The RAF proteins are cytosolic protein kinases that regulate cell responses to extracellular signals. There are three RAF proteins in cells, ARAF, BRAF and CRAF, and recent studies have shown that the formation of complexes by these different isoforms has an important role in their activation, particularly in response to RAF inhibitors. Here, we investigated the role of ARAF in cancer cell signaling and examined the role of ARAF in mediating paradoxical activation of the MAPK pathway in cells treated with RAF inhibitors. We show that two mutations that occur in ARAF in cancer inactivate the kinase. We also show that ARAF is not functionally redundant with CRAF and cannot substitute for CRAF downstream of RAS. We further show that ARAF binds to and is activated by BRAF and that ARAF also forms complexes with CRAF. Critically, ARAF seems to stabilize BRAF:CRAF complexes in cells treated with RAF inhibitors and thereby regulate cell signaling in a subtle manner to ensure signaling efficiency. Oncogene (2013) 32, 3207–3212; doi:10.1038/onc.2012.330; published online 27 August 2012 Keywords: ARAF; BRAF; CRAF; protein complexes; paradoxical activation INTRODUCTION dimerization, leading to the formation of BRAF:CRAF heterodimers The RAF proteins are serine-threonine-specific protein kinases that and CRAF:CRAF homodimers containing a drug-bound and a activate the MEK/ERK cascade downstream of RAS.
    [Show full text]
  • WO 2017/083562 Al 18 May 20 17 (18.05.2017) W P O P C T
    (12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2017/083562 Al 18 May 20 17 (18.05.2017) W P O P C T (51) International Patent Classification: AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, C12Q 1/68 (2006.01) C12N 15/10 (2006.01) BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DJ, DK, DM, DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, (21) International Application Number: HN, HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KN, KP, KR, PCT/US2016/061395 KW, KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, (22) International Filing Date: MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, 10 November 2016 (10.1 1.2016) OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, (25) Filing Language: English TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, (26) Publication Language: English ZW. (30) Priority Data: (84) Designated States (unless otherwise indicated, for every 62/254,1 10 11 November 2015 ( 11. 11.2015) US kind of regional protection available): ARIPO (BW, GH, GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, ST, SZ, (71) Applicant: RESOLUTION BIOSCIENCE, INC. TZ, UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, [US/US]; 2023 120th Avenue Northeast, Suite 100, Bel- TJ, TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, levue, Washington 98005 (US).
    [Show full text]
  • Dema and Faust Et Al., Suppl. Material 2020.02.03
    Supplementary Materials Cyclin-dependent kinase 18 controls trafficking of aquaporin-2 and its abundance through ubiquitin ligase STUB1, which functions as an AKAP Dema Alessandro1,2¶, Dörte Faust1¶, Katina Lazarow3, Marc Wippich3, Martin Neuenschwander3, Kerstin Zühlke1, Andrea Geelhaar1, Tamara Pallien1, Eileen Hallscheidt1, Jenny Eichhorst3, Burkhard Wiesner3, Hana Černecká1, Oliver Popp1, Philipp Mertins1, Gunnar Dittmar1, Jens Peter von Kries3, Enno Klussmann1,4* ¶These authors contributed equally to this work 1Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Robert- Rössle-Strasse 10, 13125 Berlin, Germany 2current address: University of California, San Francisco, 513 Parnassus Avenue, CA 94122 USA 3Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Robert-Rössle-Strasse 10, 13125 Berlin, Germany 4DZHK (German Centre for Cardiovascular Research), Partner Site Berlin, Oudenarder Strasse 16, 13347 Berlin, Germany *Corresponding author Enno Klussmann Max Delbrück Center for Molecular Medicine Berlin in the Helmholtz Association (MDC) Robert-Rössle-Str. 10, 13125 Berlin Germany Tel. +49-30-9406 2596 FAX +49-30-9406 2593 E-mail: [email protected] 1 Content 1. CELL-BASED SCREENING BY AUTOMATED IMMUNOFLUORESCENCE MICROSCOPY 3 1.1 Screening plates 3 1.2 Image analysis using CellProfiler 17 1.4 Identification of siRNA affecting cell viability 18 1.7 Hits 18 2. SUPPLEMENTARY TABLE S4, FIGURES S2-S4 20 2 1. Cell-based screening by automated immunofluorescence microscopy 1.1 Screening plates Table S1. Genes targeted with the Mouse Protein Kinases siRNA sub-library. Genes are sorted by plate and well. Accessions refer to National Center for Biotechnology Information (NCBI, BLA) entries. The siRNAs were arranged on three 384-well microtitre platres.
    [Show full text]
  • Network Impact of the SERT Ala56 Coding Variant
    fnmol-13-00089 June 8, 2020 Time: 16:4 # 1 ORIGINAL RESEARCH published: 08 June 2020 doi: 10.3389/fnmol.2020.00089 Ex vivo Quantitative Proteomic Analysis of Serotonin Transporter Interactome: Network Impact of the SERT Ala56 Coding Variant Meagan A. Quinlan1,2,3, Matthew J. Robson4, Ran Ye2, Kristie L. Rose5, Kevin L. Schey5 and Randy D. Blakely2,6* 1 Department of Psychiatry and Behavioral Sciences, University of Washington, Seattle, WA, United States, 2 Department of Pharmacology, Vanderbilt University, Nashville, TN, United States, 3 Department of Biomedical Science, Charles E. Schmidt College of Medicine, Florida Atlantic University, Jupiter, FL, United States, 4 Division of Pharmaceutical Sciences, James L. Winkle College of Pharmacy, University of Cincinnati, Cincinnati, OH, United States, 5 Department of Biochemistry, Vanderbilt University, Nashville, TN, United States, 6 Brain Institute, Florida Atlantic University, Jupiter, FL, United States Altered serotonin (5-HT) signaling is associated with multiple brain disorders, including major depressive disorder (MDD), obsessive-compulsive disorder (OCD), and autism spectrum disorder (ASD). The presynaptic, high-affinity 5-HT transporter (SERT) tightly regulates 5-HT clearance after release from serotonergic neurons in the brain and enteric nervous systems, among other sites. Accumulating evidence suggests that SERT is dynamically regulated in distinct activity states as a result of environmental and Edited by: Raul R. Gainetdinov, intracellular stimuli, with regulation perturbed by disease-associated coding variants. Saint Petersburg State University, Our lab identified a rare, hypermorphic SERT coding substitution, Gly56Ala, in Russia subjects with ASD, finding that the Ala56 variant stabilizes a high-affinity outward- Reviewed by: facing conformation (SERT∗) that leads to elevated 5-HT uptake in vitro and in vivo.
    [Show full text]
  • Supporting Information
    Supporting Information Faltermeier et al. 10.1073/pnas.1521674112 A. FU-R1-R2-V5-SV40-BlasƟ-CGW UbiquiƟn-C CMV 5’ LTR R1 Kinase R2 V5 SV40 BlastiR 3’ LTR promoter promoter GFP B. Kinase (kDa) 210 CMV GFP WPR 105 promot E er 78 49 38 28 V5 293t cells Fig. S1. Lentivirus-mediated overexpression of V5-tagged kinases. (A) Full-length kinases were cloned into the FU-R1-R2-V5-SV40-Blasti-CGW lentiviral vector shown. R1 and R2 represent recombination sites required for recombination-based Gateway cloning. LTR, Long-terminal repeat. (B) Western blot showing expression of selected kinases in 293t cells detected by a V5 antibody. The molecular mass of each kinase is indicated in parentheses. A. vector SrcY529F 3 Cap8 cells 2 weeks 2 x107 Tail vein Y529F Src injecƟon SCID 1 Luciferase reporter BLI Radiance (p/sec/cm3/sr) B. Lungs from mice injected with Cap8-SrcY529F cells Mouse 1 Mouse 2 Fig. S2. SrcY529F promotes lung colonization when overexpressed in murine prostate cells. (A) Experimental design to demonstrate that expression of mu- tationally activated kinase SrcY529F in Cap8 cells promotes lung colonization. (B) Bright-field images of lungs removed from mice 3 wk after being injected with Cap8-SrcY529F cells. (Scale bars, 5 mm.) Faltermeier et al. www.pnas.org/cgi/content/short/1521674112 1of5 A. Lungs-NTRK2 210 105 NTRK2 78 49 38 V5 293t cells Metastases Ɵssue Lungs-EGFR 210 EGFR 105 78 49 38 V5 293t cells Metastases Ɵssues Lungs-Her2 210 105 HER2 78 49 38 V5 293t cells Metastases Ɵssues B.
    [Show full text]
  • Oncogenic and Sorafenib-Sensitive ARAF Mutations in Lung Adenocarcinoma
    Oncogenic and sorafenib-sensitive ARAF mutations in lung adenocarcinoma Marcin Imielinski, … , Matthew Meyerson, David P. Carbone J Clin Invest. 2014;124(4):1582-1586. https://doi.org/10.1172/JCI72763. Brief Report Oncology Targeted cancer therapies often induce “outlier” responses in molecularly defined patient subsets. One patient with advanced-stage lung adenocarcinoma, who was treated with oral sorafenib, demonstrated a near-complete clinical and radiographic remission for 5 years. Whole-genome sequencing and RNA sequencing of primary tumor and normal samples from this patient identified a somatic mutation, ARAF S214C, present in the cancer genome and expressed at high levels. Additional mutations affecting this residue of ARAF and a nearby residue in the related kinase RAF1 were demonstrated across 1% of an independent cohort of lung adenocarcinoma cases. The ARAF mutations were shown to transform immortalized human airway epithelial cells in a sorafenib-sensitive manner. These results suggest that mutant ARAF is an oncogenic driver in lung adenocarcinoma and an indicator of sorafenib response. Find the latest version: https://jci.me/72763/pdf Brief report Oncogenic and sorafenib-sensitive ARAF mutations in lung adenocarcinoma Marcin Imielinski,1,2,3 Heidi Greulich,2,3,4 Bethany Kaplan,2,3 Luiz Araujo,5 Joseph Amann,5 Leora Horn,6 Joan Schiller,7 Miguel A. Villalona-Calero,5 Matthew Meyerson,2,3,8 and David P. Carbone5 1Molecular Pathology Unit, Massachusetts General Hospital, Harvard Medical School, Charlestown, Massachusetts, USA. 2Cancer Program, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA. 3Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. 4Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts, USA.
    [Show full text]
  • Kinase Brochure (PDF)
    KinaseScreen - RapidKinase • Set panels of kinases assays - RapidKinase 48 with broad representation of the kinome Discovery Alliances & Services - RapidKinase 200 for wide kinase selectivity screens • Create your panel using any combination of plates • Relies on Caliper ProfilerPro plates reagents: - 24 kinase assays per ProfilerPro plate - Highly reproducible data - Assays run at apparent ATP Km KinaseScreen CDAS| Programs Kinases are an important class of enyzmes involved in signal transduction and signaling networks within cells. Kinase signal- ing pathways play a fundamental role in regulating cell prolif- eration, cell metabolism and cell death. Research shows that changes in protein kinase activity within a cell can lead to several disease states, most notably cancer. With this knowledge base, scientists have been investigating the ability of drugs to block various protein kinases as a cancer therapy. This approach has proved successful with the discovery of several kinase inhibitor drugs for the treatment of various cancers. These drugs include Gleevec®, Iressa® and Tarceva®. In addition to their involvement in cancer, protein kinases are implicated in diabetes, inflamma- tion and neurological development and degeneration. Discovery Alliances & Services ©2010 Caliper Life Sciences, Inc. All rights reserved. Preclinical Contract Services Caliper, the Caliper logo, KinaseScreen, KinaseAdvisor, ProfilerPro, CDAS and Discovery 7170 Standard Drive Alliances & Services are tradenames and/or trademarks of Caliper Life Sciences, Inc. Hanover, Maryland 21076-1334 USA All other names are trademarks of their respective companies. Tel: 1.410.712.4410 / 1.800.543.4141 CDAS-BR-01 Nov 10 KinaseScreen Programs KinaseScreen Programs Protein Kinases KinaseScreen Mechanism of Action (MoA) Protein kinases are involved in a wide variety of disease states and over 30% of all spending for drug development focuses on • Understand how compounds interact with enzymatic targets this area of research.
    [Show full text]