Special-Status Species Lists
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Analysis of the Giant Genomes of Fritillaria (Liliaceae) Indicates That a Lack of DNA Removal Characterizes Extreme Expansions in Genome Size
CORE Metadata, citation and similar papers at core.ac.uk Provided by Queen Mary Research Online Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size. Kelly, LJ; Renny-Byfield, S; Pellicer, J; Macas, J; Novák, P; Neumann, P; Lysak, MA; Day, PD; Berger, M; Fay, MF; Nichols, RA; Leitch, AR; Leitch, IJ © 2015 The Authors. CC-BY For additional information about this publication click this link. http://qmro.qmul.ac.uk/jspui/handle/123456789/8496 Information about this research object was correct at the time of download; we occasionally make corrections to records, please therefore check the published record when citing. For more information contact [email protected] Research Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size Laura J. Kelly1,2, Simon Renny-Byfield1,3, Jaume Pellicer2,Jirı Macas4, Petr Novak4, Pavel Neumann4, Martin A. Lysak5, Peter D. Day1,2, Madeleine Berger2,6,7, Michael F. Fay2, Richard A. Nichols1, Andrew R. Leitch1 and Ilia J. Leitch2 1School of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK; 2Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, TW9 3DS, UK; 3 4 Department of Plant Sciences, University of California Davis, Davis, CA 95616, USA; Biology Centre CAS, Institute of Plant Molecular Biology, CZ-37005, Ceske Budejovice, Czech Republic; 5Plant Cytogenomics Research Group, CEITEC – Central European Institute of Technology, Masaryk University, Kamenice 5, CZ-62500, Brno, Czech Republic; 6School of Biological and Biomedical Sciences, Durham University, South Road, Durham DH1 3LE, UK; 7Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, UK Summary Authors for correspondence: Plants exhibit an extraordinary range of genome sizes, varying by > 2000-fold between the Laura J. -
Botanical Priority Guidebook
Botanical Priority Protection Areas Alameda and Contra Costa Counties the East Bay Regional Park District. However, certain BPPAs include Hills have been from residential development. public parcels or properties with other conservation status. These are cases where land has been conserved since the creation of these boundaries or where potential management decisions have the poten- Following this initial mapping effort, the East Bay Chap- \ ntroduction tial to negatively affect an area’s botanical resources. Additionally, ter’s Conservation Committee began to utilize the con- each acre within these BPPAs represents a potential area of high pri- cept in draft form in key local planning efforts. Lech ority. Both urban and natural settings are included within these Naumovich, the chapter’s Conservation Analyst staff The lands that comprise the East Bay Chapter are located at the convergence boundaries, therefore, they are intended to be considered as areas person, showcased the map set in forums such as the of the San Francisco Bay, the North and South Coast Ranges, the Sacra- warranting further scrutiny due to the abundance of nearby sensitive BAOSC’s Upland Habitat Goals Project and the Green mento-San Joaquin Delta, and the San Joaquin Valley. The East Bay Chapter botanical resources supported by high quality habitat within each E A S T B A Y Vision Group (in association with Greenbelt Alliance); area supports a unique congregation of ecological conditions and native BPPA. Although a parcel, available for preservation through fee title C N P S East Bay Regional Park District’s Master Plan Process; plants. Based on historic botanical collections, the pressures from growth- purchase or conservation easement, may be located within the and local municipalities. -
Anthony Chabot Plants
Anthony Chabot Plants A photographic guide to wild plants of Anthony Chabot Regional Park Sorted by Scientific Name Photographs by Wilde Legard Botanist, East Bay Regional Park District Revision: February 23, 2007 More than 2,000 species of native and naturalized plants grow wild in the San Francisco Bay Area. Most are very difficult to identify without the help of good illustrations. This is designed to be a simple, color photo guide to help you identify some of these plants. The selection of plants displayed in this guide is by no means complete. The intent is to expand the quality and quantity of photos over time. The revision date is shown on the cover and on the header of each photo page. A comprehensive plant list for this area (including the many species not found in this publication) can be downloaded at the East Bay Regional Park District’s wild plant download page at: http://www.ebparks.org. This guide is published electronically in Adobe Acrobat® format to accommodate these planned updates. You have permission to freely download, distribute, and print this pdf for individual use. You are not allowed to sell the electronic or printed versions. In this version of the guide, the included plants are sorted alphabetically by scientific name. Under each photograph are four lines of information, based on upon the current standard wild plant reference for California: The Jepson Manual: Higher Plants of California, 1993. Scientific Name Scientific names revised since 1993 are NOT included in this edition. Common Name These non-standard names are based on Jepson and other local references. -
A Checklist of Vascular Plants Endemic to California
Humboldt State University Digital Commons @ Humboldt State University Botanical Studies Open Educational Resources and Data 3-2020 A Checklist of Vascular Plants Endemic to California James P. Smith Jr Humboldt State University, [email protected] Follow this and additional works at: https://digitalcommons.humboldt.edu/botany_jps Part of the Botany Commons Recommended Citation Smith, James P. Jr, "A Checklist of Vascular Plants Endemic to California" (2020). Botanical Studies. 42. https://digitalcommons.humboldt.edu/botany_jps/42 This Flora of California is brought to you for free and open access by the Open Educational Resources and Data at Digital Commons @ Humboldt State University. It has been accepted for inclusion in Botanical Studies by an authorized administrator of Digital Commons @ Humboldt State University. For more information, please contact [email protected]. A LIST OF THE VASCULAR PLANTS ENDEMIC TO CALIFORNIA Compiled By James P. Smith, Jr. Professor Emeritus of Botany Department of Biological Sciences Humboldt State University Arcata, California 13 February 2020 CONTENTS Willis Jepson (1923-1925) recognized that the assemblage of plants that characterized our flora excludes the desert province of southwest California Introduction. 1 and extends beyond its political boundaries to include An Overview. 2 southwestern Oregon, a small portion of western Endemic Genera . 2 Nevada, and the northern portion of Baja California, Almost Endemic Genera . 3 Mexico. This expanded region became known as the California Floristic Province (CFP). Keep in mind that List of Endemic Plants . 4 not all plants endemic to California lie within the CFP Plants Endemic to a Single County or Island 24 and others that are endemic to the CFP are not County and Channel Island Abbreviations . -
Biological Resources Study Tolay Creek Ranch Sonoma County, California
BIOLOGICAL RESOURCES STUDY TOLAY CREEK RANCH SONOMA COUNTY, CALIFORNIA Submitted to: Sonoma Land Trust 2300 County Center Drive #120A Santa Rosa, California 95403 Prepared by: LSA Associates, Inc. 157 Park Place Point Richmond, California 94801 (510) 236-6810 LSA Project No. SOZ0801 May 2o, 2009 TABLE OF CONTENTS 1.0 INTRODUCTION...........................................................................................................................1 1.1 PURPOSE.............................................................................................................................1 1.2 LOCATION ..........................................................................................................................1 1.3 BACKGROUND ..................................................................................................................1 1.4 LAND USE AND HISTORY...............................................................................................2 1.5 REGULATORY CONTEXT................................................................................................3 1.5.1 Federal Endangered Species Act .............................................................................3 1.5.2 Clean Water Act ......................................................................................................4 1.5.3 Porter-Cologne Water Quality Control Act.............................................................5 1.5.4 Migratory Bird Treaty Act.......................................................................................5 -
Diablo Foothills Wildflowers
Diablo Foothills Wildflowers A photographic guide to showy wildflowers of Diablo Foothills Regional Park Sorted by Flower Color Photographs by Wilde Legard Botanist, East Bay Regional Park District Revision: February 23, 2007 More than 2,000 species of native and naturalized plants grow wild in the San Francisco Bay Area. Most are very difficult to identify without the help of good illustrations. This is designed to be a simple, color photo guide to help you identify some of these plants. The selection of showy wildflowers displayed in this guide is by no means complete. The intent is to expand the quality and quantity of photos over time. The revision date is shown on the cover and on the header of each photo page. A comprehensive plant list for this area (including the many species not found in this publication) can be downloaded at the East Bay Regional Park District’s wild plant download page at: http://www.ebparks.org. This guide is published electronically in Adobe Acrobat® format to accommodate these planned updates. You have permission to freely download and distribute, and print this pdf for individual use. You are not allowed to sell the electronic or printed versions. In this version of the guide, only showy wildflowers are included. These wildflowers are sorted first by flower color, then by plant family (similar flower types), and finally by scientific name within each family. Under each photograph are four lines of information, based on the current standard wild plant reference for California: The Jepson Manual: Higher Plants of California, 1993. Common Name These non-standard names are based on Jepson and other local references. -
Point Reyes National Seashore Threatened, Rare, and Endangered
Threatened, Rare, and Endangered Plants of Point Reyes (and Golden Gate National Recreation Area) Federal State CNPS Current Scientific Name1 Old Scientific Name Common Name Family Only at GOGA Status Status Ranking Abronia umbellata ssp. breviflora Abronia umbellata ssp. breviflora Pink sand-verbena NYCTAGINACEAE 1B.1 Agrostis blasdalei Agrostis blasdalei Blasdale’s bent grass POACEAE 1B.2 Alopecurus aequalis var. sonomensis Alopecurus aequalis var. sonomensis Sonoma alopecurus POACEAE FE (1997) 1B.1 Arabis blepharophylla Arabis blepharophylla Coast rock cress BRASSICACEAE 4.3 Arctostaphylos virgata Arctostaphylos virgata Marin manzanita ERICACEAE 1B.2 Astragalus pycnostachyus var. pycnostachyus Astragalus pycnostachyus var. pycnostachyus Coastal marsh milkvetch FABACEAE 1B.2 Blennosperma nanum Blennosperma nanum var. robustum Point Reyes blemnosperma ASTERACEAE CR (1978) 1B.2 Calamagrostis stricta ssp. inexpansa Calamagrostis crassiglumis Thurber's reed grass POACEAE 2.1 Calystegia purpurata ssp. saxicola Calystegia purpurata ssp. saxicola Coastal bluff morning-glory CONVOLVULACEAE 1B.2 Campanula californica Campanula californica Swamp harebell CAMPANULACEAE 1B.2 Carex buxbaumii Carex buxbaumii Buxbaum's sedge CYPERACEAE 4.2 Castilleja affinis ssp. neglecta Castilleja affinis ssp. neglecta Tibuon paintbrush OROBANCHACEAE FE (1995) CT (1990) 1B.2 GOGA Castilleja ambigua ssp. humboldtiensis Castilleja ambigua ssp. humboldtiensis Humboldt bay owl's clover OROBANCHACEAE 1B.2 Ceanothus gloriosus var. exalatus Ceanothus gloriosus var. exalatus Glory bush RHAMNACEAE 4.3 Ceanothus gloriosus var. gloriosus Ceanothus gloriosus var. gloriosus Point Reyes ceanothus RHAMNACEAE 4.3 Ceanothus gloriosus var. porrectus Ceanothus gloriosus var. porrectus Mount Vision ceanothus RHAMNACEAE 1B.3 Ceanothus masonii Ceanothus masonii Mason's ceanthos RHAMNACEAE 1B.2 Chloropyron maritimum ssp. palustre Cordylanthus maritimus ssp. palustris Point Reyes birds’ beak OROBANCHACEAE 1B.2 Chorizanthe cuspidata var. -
F. Biological Resources
LSA ASSOCIATES, INC. BENICIA BUSINESS PARK EIR DECEMBER 2007 IV. SETTING, IMPACTS AND MITIGATION MEASURES F. BIOLOGICAL RESOURCES F. BIOLOGICAL RESOURCES This section describes: 1) existing biological resources at the project site; 2) sensitive plant and animal communities, including wetlands; 3) potentially occurring special-status species; 4) potential impacts to biological resources associated with implementation of the proposed project; and 5) mitigation measures, as appropriate. 1. Setting a. Methods. The methods used to evaluate the site and project are identified below. (1) Records Search and Literature Review. Available reports of biological resources at the project site and special-status species databases were reviewed to identify habitat types and species potentially occurring at the project site. Reports that were prepared by Sycamore Associates, LLC and reviewed by LSA include: Rare Plant Surveys and Habitat Assessment for Wetlands at the Seeno Benicia Industrial Park Project, City of Benicia, Solano County, California1; Rare Plant Surveys of Upland Habitats, Seeno Benicia Industrial Park Project, City of Benicia, Solano County, California2; Summer-Season Focused Special-status Plant Surveys at the Proposed Benicia Industrial Park, Solano County3; Bat Habitat Assessment, Benicia Business Park, Solano County, California4; and Verified Wetlands Delineation and Jurisdictional Determination for the Seeno Benicia Industrial Park Project, City of Benicia, Solano County, California5. The Benicia Business Park Bat Roost Reconnaissance Survey that was prepared by Wetland Research Associates (WRA) was also reviewed. 6 The California Natural Diversity Database7 (CNDDB) and the California Native Plant Society’s (CNPS) on-line Inventory of Rare and Endangered Plants8 were searched to identify potentially occurring special-status species. -
CALYPSO Printed on Recycled Paper
NONPROFIT ORG. U.S. POSTAGE PAID GUALALA CA PERMIT NO. 21 THE PO Box 577, Gualala CA 95445 $5.00 per year, non-members Volume 99, Jan/Feb, 2000 CALYPSO Printed on Recycled Paper NEWSLETTER OF THE DOROTHY KING YOUNG CHAPTER CALIFORNIA NATIVE PLANT SOCIETY CALENDAR upon them. In fact, many lilies are rare. The California Native Plant Society's Inventory of Rare and Endangered Vascular Plants of California lists Jan. 28, Friday – Wildflower slide show presented 101 taxa as warranting some level of protection. by San Smith following 6:00 PM potluck dinner at Eight taxa are listed or proposed for listing as Gualala Community Center. endangered or threatened under the Federal Endangered Species Act and another eight are listed under the California Endangered Species Act, EDUCATION Fritillaries are a shy and delicate group of perennials, producing flowers with no consistency FOCUS ON RARITIES—Fragrant Fritillary whatsoever. Eighteen species have been recorded (Fritillaria liliacea) by Mike Wood (from the CNPS in California, all native. Some 100 species are Yerba Buena newsletter.) known from the temperate zones of the Northern Hemisphere. Fritillaries belong to the lily family (Liliaceae), Plants produce along with agaves, onions (Allium), goldenstar bulbs that (Boomeria), Brodiaea, Calochortus, blue dicks develop short (Dichelostemma), fawn lily (Erythronium), true lilies stems with (Lilium), Mullla, Scoliopus, false Solomon's seal alternate (or (Smilacina), Trillium, Triteleia, Yucca, and death whorled), sessile, camas (Zigadenus), among many others. linear to ovate Worldwide, the family includes 4,600 species in 300 leaves along genera. California supports 220 native species in their length. 33 genera, along with another 11 nonnative species Flowers are and six nonnative genera. -
Fountaingrove Lodge Appendix H Species Tables
Appendix H Species Tables APPENDIX H Species Tables TABLE H-1 Special-Status Plant Species Potentially Occurring within the Fountaingrove Lodge Study Area USFWS/ CDFG/ Scientific Name Common Name CNPS Suitable Habitat for the Species Flowering Period Potential to Occur Allium peninsulare var. Franciscan onion None/None/1B.2 Cismontane woodland, valley and foothill grassland/clay, volcanic, often May-June Very low. Nearest known locality near Kenwood, about 10 miles SE of project area (CalFlora franciscanum serpentinite. 100-300m 2007, Jepson On-line Interchange 2007). Amorpha californica var. Napa false indigo None/None/1B.2 Broadleaved upland forest, chaparral, cismontane woodland; often shaded April – July Moderate. Nearest known localities < 5 miles NE of project area at Pepperwood Preserve napensis slopes. 150-200m. (CNDDB 2007, DeNevers 2003). Amsinckia lunaris bent-flowered None/None/1B.2 Coastal bluff scrub, cismontane woodland, valley and foothill grassland. March-June Low. A wide-ranging species. Nearest known locality near Kenwood, about 10 miles SE of project fiddleneck 3-500m. area (CalFlora 2007, Jepson On-line Interchange 2007). Anomobryum julaceuma slender silver-moss None/None/List 2.2 Broadleaved upland forest, lower montane coniferous forest, north coast March-June Very Low. Nearest known locality < 5 miles E of the project area, near the intersection of coniferous forest. 100-1000m. Calistoga and St. Helena roads (Norris and Shevock 2004). Astragalus claranus Clara Hunt's FE/ None/1B.1 Cismontane woodland, valley foothill grassland, chaparral; sometimes on March-May Very Low. Nearest known locality is about 6 miles NE of the project area, near Alpine School on milk-vetch serpentine. -
Serpentine Endemism in the California Flora: a Database of Serpentine Affinity
MADRONÄ O, Vol. 52, No. 4, pp. 222±257, 2005 SERPENTINE ENDEMISM IN THE CALIFORNIA FLORA: A DATABASE OF SERPENTINE AFFINITY H. D. SAFFORD1,2,J.H.VIERS3, AND S. P. HARRISON2 1 USDA-Forest Service, Paci®c Southwest Region, 1323 Club Drive, Vallejo, CA 94592 [email protected] 2 Department of Environmental Science and Policy, University of California, Davis, CA 95616 3 Information Center for the Environment, DESP, University of California, Davis, CA 95616 ABSTRACT We present a summary of a database documenting levels of af®nity to ultrama®c (``serpentine'') sub- strates for taxa in the California ¯ora, USA. We constructed our database through an extensive literature search, expert opinion, ®eld observations, and intensive use of accession records at key herbaria. We developed a semi-quantitative methodology for determining levels of serpentine af®nity (strictly endemic, broadly endemic, strong ``indicator'', etc.) in the California ¯ora. In this contribution, we provide a list of taxa having high af®nity to ultrama®c/serpentine substrates in California, and present information on rarity, geographic distribution, taxonomy, and lifeform. Of species endemic to California, 12.5% are restricted to ultrama®c substrates. Most of these taxa come from a half-dozen plant families, and from only one or two genera within each family. The North Coast and Klamath Ranges support more serpentine endemics than the rest of the State combined. 15% of all plant taxa listed as threatened or endangered in California show some degree of association with ultrama®c substrates. Information in our database should prove valuable to efforts in ecology, ¯oristics, biosystematics, conservation, and land management. -
Wild Plants of Anthony / Lake Chabot Regional Park Common Name
Wild Plants of Anthony / Lake Chabot Regional Park Common Name Version A Photographic Guide Sorted by Form, Color and Family with Habitat Descriptions and Identification Notes Photographs and text by Wilde Legard District Botanist, East Bay Regional Park District New Revised and Expanded Edition - Includes the latest scientific names, habitat descriptions and identification notes Decimal Inches .1 .2 .3 .4 .5 .6 .7 .8 .9 1 .5 2 .5 3 .5 4 .5 5 .5 6 .5 7 .5 8 .5 9 1/8 1/4 1/2 3/4 1 1/2 2 1/2 3 1/2 4 1/2 5 1/2 6 1/2 7 1/2 8 1/2 9 English Inches Notes: A Photographic Guide to the Wild Plants of Anthony / Lake Chabot Regional Park More than 2,000 species of native and naturalized plants grow wild in the San Francisco Bay Area. Most are very difficult to identify without the help of good illustrations. This is designed to be a simple, color photo guide to help you identify some of these plants. This guide is published electronically in Adobe Acrobat® format so that it can easily be updated as additional photographs become available. You have permission to freely download, distribute and print this guide for individual use. Photographs are © 2014 Wilde Legard, all rights reserved. In this guide, the included plants are sorted first by form (Ferns & Fern-like, Grasses & Grass-like, Herbaceous, Woody), then by most common flower color, and finally by similar looking flowers (grouped by genus within each family). Each photograph has the following information, separated by '-': COMMON NAME According to The Jepson Manual: Vascular Plants of California, Second Edition (JM2) and other references (not standardized).