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OFFICE of RESEARCH PUBLICATIONS Please Adjust Your Settings in Acrobat to Continuous Facing to Properly View This File
YOU ARE VIEWING A .PDF FILE FROM THE OFFICE OF RESEARCH PUBLICATIONS Please adjust your settings in Acrobat to Continuous Facing to properly view this file. Thank You. CATFISH Jeff Gage Ichthyologist Larry Page with a Tiger Catfish. OME CATFISH BREATHE AIR AND SQUIGGLE ACROSS LAND.OTHERS STUN PREY WITH SSHOCKS REACHING 400 VOLTS.STILL OTHERS SUBSIST ON WOOD, LIKE TERMITES. Catfish are found on every continent except Antarctica. They range from fingernail-length miniatures to sedan- length monsters. They are among the most diverse and com- mon fishes, comprising one in four freshwater species. Despite nearly three centuries of exploration and research and the recognition of more than 2,700 species, an estimated 1,750 catfish species remain unknown to science. But not for long. Backed by a $4.7 million grant from the National Sci- ence Foundation, scientists at the University of Florida’s Florida Museum of Natural History have begun leading a five-year effort to discover and describe all catfish species. The only one of four similar projects in the NSF’s Planetary Bio- diversity Inventory program that focuses on vertebrates, the project will tap 230 scientists from around the globe, with many hauling nets and buckets into some of the world’s most remote waters. The other NSF projects focus on plants, insects and microscopic organisms called Eumycetozoa or, more commonly, slime molds. Randy Olson 18 Spring 2004 A native stalks a Suckermouth Armored Catfish in Guyana. HUNTERS BY AARON HOOVER SCIENTISTS WORLDWIDE AIM TO IDENTIFY ALL THE REMAINING SPECIES OF CATFISH, BEFORE IT’STOOLATE Practical considerations have says the goal is a comprehensive accounting before it’s too late. -
Atheriniformes : Atherinidae
Atheriniformes: Atherinidae 2111 Atheriniformes: Atherinidae Order ATHERINIFORMES ATHERINIDAE Silversides by L. Tito de Morais, IRD/LEMAR, University of Brest, Plouzané, France; M. Sylla, Centre de Recherches Océanographiques de Dakar-Thiaroye (CRODT), Senegal and W. Ivantsoff (retired), Biology Science, Macquarie University NSW 2109, North Ryde, Australia iagnostic characters: Small, elongate fish, rarely exceeding 15 cm in length. Body elongate and Dsomewhat compressed. Short head, generally flattened dorsally, large eyes, sharp nose, mouth small, oblique and in terminal position, jaws subequal, reaching or slightly exceeding the anterior margin of the eye; premaxilla with ascending process of variable length, with lateral process present or absent; ramus of dentary bone elevated posteriorly or indistinct from anterior part of lower jaw; fine, small and sharp teeth on the jaws, on the roof of mouth (vomer, palatine, pterygoid) or on outside of mouth; 10 to 26 gill rakers long and slender on lower arm of first gill arch. Two well-separated dorsal fins, the first with 6 to 10 thin, flexible spines, located approximately in the middle of the body; the second dorsal and anal fins with a single small weak spine, 1 unbranched soft ray and a variable number of soft rays. Anal fin always originating slightly in advance of second dorsal fin; pectoral fins inserted high on the flanks, directly behind posterior rim of gill cover, with spine greatly reduced and first ray much thicker than those following. Abdomninal pelvic fins with 1 spine and 5 soft rays; forked caudal fin; anus away from the origin of the anal fin. Relatively large scales, cycloid (smooth). -
Age, Growth and Body Condition of Big-Scale Sand Smelt Atherina Boyeri Risso, 1810 Inhabiting a Freshwater Environment: Lake Trasimeno (Italy)
Knowledge and Management of Aquatic Ecosystems (2015) 416, 09 http://www.kmae-journal.org c ONEMA, 2015 DOI: 10.1051/kmae/2015005 Age, growth and body condition of big-scale sand smelt Atherina boyeri Risso, 1810 inhabiting a freshwater environment: Lake Trasimeno (Italy) M. Lorenzoni(1), D. Giannetto(2),,A.Carosi(1), R. Dolciami(3), L. Ghetti(4), L. Pompei(1) Received September 24, 2014 Revised January 29, 2015 Accepted January 29, 2015 ABSTRACT Key-words: The age, growth and body condition of the big-scale sand smelt (Athe- Population rina boyeri) population of Lake Trasimeno were investigated. In total, dynamics, 3998 specimens were collected during the study and five age classes Lee’s (from 0+ to 4+) were identified. From a subsample of 1017 specimens, phenomenon, there were 583 females, 411 males and 23 juveniles. The equations = − fishery between total length (TL) and weight (W) were: log10 W 2.326 + = − management, 3.139 log10 TL for males and log10 W 2.366 + 3.168 log10 TL for fe- introduced males. There were highly significant differences between the sexes and species, for both sexes the value of b (slope of the log (TL-W regression) was Lake Trasimeno greater than 3 (3.139 for males and 3.168 for females), indicating positive allometric growth. The parameters of the theoretical growth curve were: −1 TLt = 10.03 cm; k = 0.18 yr , t0 = −0.443 yr and Φ = 1.65. Monthly trends of overall condition and the gonadosomatic index (GSI) indicated that the reproductive period occurred from March to September. Analy- sis of back-calculated lengths indicated the occurrence of a reverse Lee’s phenomenon. -
Edna Assay Development
Environmental DNA assays available for species detection via qPCR analysis at the U.S.D.A Forest Service National Genomics Center for Wildlife and Fish Conservation (NGC). Asterisks indicate the assay was designed at the NGC. This list was last updated in June 2021 and is subject to change. Please contact [email protected] with questions. Family Species Common name Ready for use? Mustelidae Martes americana, Martes caurina American and Pacific marten* Y Castoridae Castor canadensis American beaver Y Ranidae Lithobates catesbeianus American bullfrog Y Cinclidae Cinclus mexicanus American dipper* N Anguillidae Anguilla rostrata American eel Y Soricidae Sorex palustris American water shrew* N Salmonidae Oncorhynchus clarkii ssp Any cutthroat trout* N Petromyzontidae Lampetra spp. Any Lampetra* Y Salmonidae Salmonidae Any salmonid* Y Cottidae Cottidae Any sculpin* Y Salmonidae Thymallus arcticus Arctic grayling* Y Cyrenidae Corbicula fluminea Asian clam* N Salmonidae Salmo salar Atlantic Salmon Y Lymnaeidae Radix auricularia Big-eared radix* N Cyprinidae Mylopharyngodon piceus Black carp N Ictaluridae Ameiurus melas Black Bullhead* N Catostomidae Cycleptus elongatus Blue Sucker* N Cichlidae Oreochromis aureus Blue tilapia* N Catostomidae Catostomus discobolus Bluehead sucker* N Catostomidae Catostomus virescens Bluehead sucker* Y Felidae Lynx rufus Bobcat* Y Hylidae Pseudocris maculata Boreal chorus frog N Hydrocharitaceae Egeria densa Brazilian elodea N Salmonidae Salvelinus fontinalis Brook trout* Y Colubridae Boiga irregularis Brown tree snake* -
Acanthopterygii, Bone, Eurypterygii, Osteology, Percomprpha
Research in Zoology 2014, 4(2): 29-42 DOI: 10.5923/j.zoology.20140402.01 Comparative Osteology of the Jaws in Representatives of the Eurypterygian Fishes Yazdan Keivany Department of Natural Resources (Fisheries Division), Isfahan University of Technology, Isfahan, 84156-83111, Iran Abstract The osteology of the jaws in representatives of 49 genera in 40 families of eurypterygian fishes, including: Aulopiformes, Myctophiformes, Lampridiformes, Polymixiiformes, Percopsiformes, Mugiliformes, Atheriniformes, Beloniformes, Cyprinodontiformes, Stephanoberyciformes, Beryciformes, Zeiformes, Gasterosteiformes, Synbranchiformes, Scorpaeniformes (including Dactylopteridae), and Perciformes (including Elassomatidae) were studied. Generally, in this group, the upper jaw consists of the premaxilla, maxilla, and supramaxilla. The lower jaw consists of the dentary, anguloarticular, retroarticular, and sesamoid articular. In higher taxa, the premaxilla bears ascending, articular, and postmaxillary processes. The maxilla usually bears a ventral and a dorsal articular process. The supramaxilla is present only in some taxa. The dentary is usually toothed and bears coronoid and posteroventral processes. The retroarticular is small and located at the posteroventral corner of the anguloarticular. Keywords Acanthopterygii, Bone, Eurypterygii, Osteology, Percomprpha following method for clearing and staining bone and 1. Introduction cartilage provided in reference [18]. A camera lucida attached to a Wild M5 dissecting stereomicroscope was used Despite the introduction of modern techniques such as to prepare the drawings. The bones in the first figure of each DNA sequencing and barcoding, osteology, due to its anatomical section are arbitrarily shaded and labeled and in reliability, still plays an important role in the systematic the others are shaded in a consistent manner (dark, medium, study of fishes and comprises a major percent of today’s and clear) to facilitate comparison among the taxa. -
Cytogenetic Analysis of Global Populations of Mugil Cephalus (Striped Mullet) by Different Staining Techniques and Fluorescent in Situ Hybridization
Heredity 76 (1996) 77—82 Received 30 May 1995 Cytogenetic analysis of global populations of Mugil cephalus (striped mullet) by different staining techniques and fluorescent in situ hybridization ANNA RITA ROSSI, DONATELLA CROSETTIt, EKATERINA GORNUNG & LUCIANA SOLA* Department of Animal and Human Biology, University of Rome 7, Via A. Bore/li 50, 00161 Rome and tICRAM, Central Institute for Marine Research, Via L. Respighi 5, 00197 Rome, Italy Thepresent paper reports the results of cytogenetic analysis carried out on several scattered populations of the striped mullet, Mugil cephalus, the most widespead among mugilid species. The karyotype was investigated through Ag-staining, C-banding, fluorochrome-staining (chro- momycin A3/DAPI) and fluorescent in situ hybridization with rDNA genes. All populations showed the same chromosome number and morphology and no changes were detected in heterochromatin and NORs. Therefore, neither population- nor sex-specific marker chromo- somes were identified. In some of the specimens, NOR size heteromorphism was detected. Results are discussed with respect to karyotype and ribosomal cistrons organization and to cytotaxonomic implications. Keywords:cytotaxonomy,FISH, heterochromatin, karyotype, NOR. Although the karyotype of M cephalus is already Introduction known (Table 1), there are no data from differential Thestriped mullet, Mugil cephalus, is the most wide- staining techniques, except for observations on spread among mugilid species, and inhabits the trop- nucleolar organizer regions (NOR5) by Amemiya & ical and subtropical seas of the world. Both the Gold (1986). Moreover, previous studies cover only worldwide distribution, the range discontinuity few localities from the wide species range and speci- (Thomson, 1963) and the coastally-dependent life mens from more than one collecting site have never history have raised questions on the conspecificity of been observed in the same laboratory. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences. -
Molecular Phylogeny of Mugilidae (Teleostei: Perciformes) D
The Open Marine Biology Journal, 2008, 2, 29-37 29 Molecular Phylogeny of Mugilidae (Teleostei: Perciformes) D. Aurelle1, R.-M. Barthelemy*,2, J.-P. Quignard3, M. Trabelsi4 and E. Faure2 1UMR 6540 DIMAR, Station Marine d'Endoume, Rue de la Batterie des Lions, 13007 Marseille, France 2LATP, UMR 6632, Evolution Biologique et Modélisation, case 18, Université de Provence, 3 Place Victor Hugo, 13331 Marseille Cedex 3, France 3Laboratoire d’Ichtyologie, Université Montpellier II, 34095 Montpellier, France 4Unité de Biologie marine, Faculté des Sciences, Campus Universitaire, 2092 Manar II, Tunis, Tunisie Abstract: Molecular phylogenetic relationships among five genera and twelve Mugilidae species were investigated us- ing published mitochondrial cytochrome b and 16S rDNA sequences. These analyses suggested the paraphyly of the genus Liza and also that the separation of Liza, Chelon and Oedalechilus might be unnatural. Moreover, all the species of the genus Mugil plus orthologs of Crenimugil crenilabis clustered together; however, molecular analyses suggested possible introgressions in Mugil cephalus and moreover, that fish identified as Mugil curema could correspond to two different species as already shown by karyotypic analyses. Keywords: Mugilidae, grey mullets, mitochondrial DNA, Mugil cephalus, introgression. INTRODUCTION We have focused this study on Mugilid species for which both cytochrome b (cytb) and 16S rDNA mtDNA sequences The family Mugilidae, commonly referred to as grey have been already published. Their geographic distributions mullets, includes several species which have a worldwide are briefly presented here. Oedalechilus labeo is limited to distribution; they inhabit marine, estuarine, and freshwater the Mediterranean Sea and the Moroccan Atlantic coast, environments at all latitudes except the Polar Regions [1]; a whereas, Liza and Chelon inhabit also the Eastern Atlantic few spend all their lives in freshwater [2]. -
Atlas of Marine Bony Fish Otoliths (Sagittae) of Southeastern-Southern
Original Article / Artigo Original Conversani et al.: Sagittae from the SouthwestBJOCE Atlantic Ocean Atlas of marine bony fish otoliths (sagittae) of Southeastern-Southern Brazil Part VII: Atheriniformes, Beloniformes, Beryciformes, Zeiformes, Syngnathiformes, Scorpaeniformes and Tetraodontiformes Valéria Regina Martins Conversani1, Marina Rito Brenha-Nunes1, César Santificetur1, Marcella Bockis Giaretta1, Carolina Correia Siliprandi1, Carmen Lucia Del Bianco Rossi-Wongtschowski1* 1 Instituto Oceanográfico da Universidade de São Paulo (Praça do Oceanográfico, 191, 05508-120 São Paulo, SP, Brazil) *Corresponding author: [email protected] ABSTRACT RESUMO In addition to the series of documents that we have Em adição à série de documentos que estamos been publishing on the "Atlas of Teleostei Otoliths publicando sobre o "Atlas de Otólitos para os peixes for the Southeastern-Southern Brazilian region", in Teleósteos da região Sudeste-Sul do Brasil", neste this volume we present the results of species of the volume apresentamos os resultados obtidos para espécies orders Atheriniformes (1 species), Beloniformes (5), das ordens Atheriniformes (1 espécie), Beloniformes Beryciformes (2), Zeiformes (2), Syngnathiformes (5), Beryciformes (2), Zeiformes (2), Syngnathiformes (2), Scorpaeniformes (9) and Tetraodontiformes (6). (2), Scorpaeniformes (9) e Tetraodontiformes (6). Foram Features, measurements and indices were analyzed analisadas as feições, medidas e índices usualmente according to methodology used in anterior series. empregados conforme metodologia -
Percomorph Phylogeny: a Survey of Acanthomorphs and a New Proposal
BULLETIN OF MARINE SCIENCE, 52(1): 554-626, 1993 PERCOMORPH PHYLOGENY: A SURVEY OF ACANTHOMORPHS AND A NEW PROPOSAL G. David Johnson and Colin Patterson ABSTRACT The interrelationships of acanthomorph fishes are reviewed. We recognize seven mono- phyletic terminal taxa among acanthomorphs: Lampridiformes, Polymixiiformes, Paracan- thopterygii, Stephanoberyciformes, Beryciformes, Zeiformes, and a new taxon named Smeg- mamorpha. The Percomorpha, as currently constituted, are polyphyletic, and the Perciformes are probably paraphyletic. The smegmamorphs comprise five subgroups: Synbranchiformes (Synbranchoidei and Mastacembeloidei), Mugilomorpha (Mugiloidei), Elassomatidae (Elas- soma), Gasterosteiformes, and Atherinomorpha. Monophyly of Lampridiformes is justified elsewhere; we have found no new characters to substantiate the monophyly of Polymixi- iformes (which is not in doubt) or Paracanthopterygii. Stephanoberyciformes uniquely share a modification of the extrascapular, and Beryciformes a modification of the anterior part of the supraorbital and infraorbital sensory canals, here named Jakubowski's organ. Our Zei- formes excludes the Caproidae, and characters are proposed to justify the monophyly of the group in that restricted sense. The Smegmamorpha are thought to be monophyletic principally because of the configuration of the first vertebra and its intermuscular bone. Within the Smegmamorpha, the Atherinomorpha and Mugilomorpha are shown to be monophyletic elsewhere. Our Gasterosteiformes includes the syngnathoids and the Pegasiformes -
Anatomy and Go Fish! Background
Anatomy and Go Fish! Background Introduction It is important to properly identify fi sh for many reasons: to follow the rules and regulations, for protection against sharp teeth or protruding spines, for the safety of the fi sh, and for consumption or eating purposes. When identifying fi sh, scientists and anglers use specifi c vocabulary to describe external or outside body parts. These body parts are common to most fi sh. The difference in the body parts is what helps distinguish one fi sh from another, while their similarities are used to classify them into groups. There are approximately 29,000 fi sh species in the world. In order to identify each type of fi sh, scientists have grouped them according to their outside body parts, specifi cally the number and location of fi ns, and body shape. Classifi cation Using a system of classifi cation, scientists arrange all organisms into groups based on their similarities. The fi rst system of classifi cation was proposed in 1753 by Carolus Linnaeus. Linnaeus believed that each organism should have a binomial name, genus and species, with species being the smallest organization unit of life. Using Linnaeus’ system as a guide, scientists created a hierarchical system known as taxonomic classifi cation, in which organisms are classifi ed into groups based on their similarities. This hierarchical system moves from largest and most general to smallest and most specifi c: kingdom, phylum, class, order, family, genus, and species. {See Figure 1. Taxonomic Classifi cation Pyramid}. For example, fi sh belong to the kingdom Animalia, the phylum Chordata, and from there are grouped more specifi cally into several classes, orders, families, and thousands of genus and species. -
Thirsty Eel Oct. 11-Corrections
1 THE THIRSTY EEL: SUMMER AND WINTER FLOW THRESHOLDS THAT TILT THE EEL 2 RIVER OF NORTHWESTERN CALIFORNIA FROM SALMON-SUPPORTING TO 3 CYANOBACTERIALLY-DEGRADED STATES 4 5 In press, Special Volume, Copeia: Fish out of Water Symposium 6 Mary E. Power1, 7 Keith Bouma-Gregson 2,3 8 Patrick Higgins3, 9 Stephanie M. Carlson4 10 11 12 13 14 1. Department of Integrative Biology, Univ. California, Berkeley, Berkeley, CA 94720; Email: 15 [email protected] 16 17 2. Department of Integrative Biology, Univ. California, Berkeley, Berkeley, CA 94720; Email: 18 [email protected]> 19 20 3. Eel River Recovery Project, Garberville CA 95542 www.eelriverrecovery.org; Email: 21 [email protected] 22 23 4. Environmental Sciences, Policy and Management, University of California, Berkeley, Berkeley, CA 24 94720; Email: [email protected] 25 26 27 Running head: Discharge-mediated food web states 28 29 Key words: cyanobacteria, discharge extremes, drought, food webs, salmonids, tipping points 30 31 Although it flows through regions of Northwestern California that are thought to be relatively well- 32 watered, the Eel River is increasingly stressed by drought and water withdrawals. We discuss how critical 33 threshold changes in summer discharge can potentially tilt the Eel from a recovering salmon-supporting 34 ecosystem toward a cyanobacterially-degraded one. To maintain food webs and habitats that support 35 salmonids and suppress harmful cyanobacteria, summer discharge must be sufficient to connect mainstem 36 pools hydrologically with gently moving, cool base flow. Rearing salmon and steelhead can survive even 37 in pools that become isolated during summer low flows if hyporheic exchange is sufficient.