A Role for LKB1 Gene in Human Cancer Beyond the Peutz–Jeghers Syndrome

Total Page:16

File Type:pdf, Size:1020Kb

A Role for LKB1 Gene in Human Cancer Beyond the Peutz–Jeghers Syndrome Oncogene (2007) 26, 7825–7832 & 2007 Nature Publishing Group All rights reserved 0950-9232/07 $30.00 www.nature.com/onc REVIEW A role for LKB1 gene in human cancer beyond the Peutz–Jeghers syndrome M Sanchez-Cespedes Molecular Pathology Programme, Spanish National Cancer Centre (CNIO), Melchor Fernandez Almagro, Madrid, Spain Germline LKB1 mutations are responsible for Peutz– development, LKB1 expression becomes more pro- Jeghers syndrome (PJS). Tumors at several locations nounced in heart, esophagus, pancreas, kidney, colon, frequently arise in these patients, confirming that LKB1 is lung, small intestine and stomach (Luukko et al., 1999; linked to cancer predisposition and is therefore a bona fide Rowan et al., 2000). In adult tissues, levels of LKB1 tumor-suppressor gene. In humans, the LKB1 gene is protein are high in most epithelia, in the follicles and located in the short arm of chromosome 19, which is corpus luteum of the ovary, and the seminiferous tubules frequently deleted in many tumors of sporadic origin. of the testis, in myocytes from skeletal muscle and in glia However, LKB1 alterations in tumors other than those of cells (Rowan et al., 2000; Conde et al., 2007; Figure 1a). PJSare rarely reported. Notably, this is not the case for non-small-cell lung cancer, where nearly half of the tumors harbor somatic and homozygous inactivating mutations in LKB1. The present review considers the LKB1 and Peutz–Jeghers syndrome frequency and pattern of LKB1 gene mutations in LKB1 sporadic cancers of various origins, and the role of the Germline mutations of cause the autosomal encoded protein in cancer development. dominant Peutz–Jeghers syndrome (PJS) (OMIM et al et al Oncogene (2007) 26, 7825–7832; doi:10.1038/sj.onc.1210594; 175200) (Hemminki ., 1998; Jenne ., 1998). published online 18 June 2007 The type and pattern of these mutations have been extensively reviewed elsewhere (Alessi et al., 2006; Keywords: LKB1; lung cancer; Peutz-Jeghers syndrome; Launonen, 2005). Individuals with PJS typically exhibit tumor suppressor gene mucocutaneous melanin pigmentation and suffer from hamartomatous polyps in the gastrointestinal tract (Jeghers et al., 1949; Giardiello et al., 2000). However, among the most important associated health-related concerns is the increased risk of cancer development Characteristics of the LKB1 gene and encoded protein: (Giardiello et al., 2000). Gastrointestinal tumors are the patterns of LKB1 expression in human tissues most commonly diagnosed malignancies in PJS patients, but the risk of developing cancer from other origins is The LKB1 gene, also known as STK11, maps to the also significantly higher (Figure 1b) (Giardiello et al., chromosomal region 19p13.3, which is frequently lost in 2000; Hearle et al., 2006a). To some extent, the pattern several types of cancer. The gene spans 23 kb and is made of tumor susceptibility in PJS patients recapitulates the up of nine coding exons and a final noncoding exon. expression of LKB1 in normal adult and embryonic B LKB1 encodes for an mRNA of 2.4kb transcribed in a tissues. For example, gonadal cell types that derive from telomere-to-centromere direction and for a protein of the coelomic epithelium (sex cords) or mesenchymal 433 amino acids and approximately 48 kDa (Hemminki cells of the embryonic gonads include granulosa cells et al., 1998). The protein, which has serine–threonine and theca cells, which have very high levels of LKB1 kinase activity, possesses a nuclear localization signal in protein (Conde et al., 2007). Interestingly, a type of the N-terminal noncatalytic region (residues 38–43) and ovarian cancer arising from these cell types, the ovarian a kinase domain (residues 49–309) (Alessi et al., 2006). sex cord tumors with annular tubules, which occurs Although LKB1 protein expression is mainly cytoplas- rarely in the general population, is present at higher mic, it can also be localized in the nucleus. frequencies in women with PJS. Likewise, the level of LKB1 is widely expressed in embryonic and adult LKB1 immunostaining is moderately high in cells from tissues although at different levels. Early mouse the breast, epithelia from the small intestine, colon and embryos (E7–11) have highly ubiquitous expression in pancreatic islets from human adult normal tissue, and all embryonic and extra-embryonic tissues. During very high in the small intestine and stomach of human embryos. Tumors from these origins are the commonest Correspondence: Dr M Sanchez-Cespedes, Molecular Pathology types in PJS (Figure 1b). Programme, Spanish National Cancer Centre (CNIO), Melchor Most studies of PJS patients have reported that only Fernandez Almagro 3, Madrid 28029, Spain. E-mail: [email protected] about half of the individuals carry LKB1 germline Received 17 March 2007; revised 14May 2007; accepted 14May 2007; mutations, which suggested that other tumor-suppressor published online 18 June 2007 genes must be associated with the syndrome in the Role of LKB1 in sporadic tumors M Sanchez-Cespedes 7826 a LKB1 PROTEIN EXPRESSION b PEUTZ-JEGHERS-RELATED TUMORS (Luuko et al. 1999; Rowan et al. 2000 (Giardiello et al.et al. 2000; et al. 2002; Conde et al. 2007) Lim et al. 2004; Hearle et al. 2006a) ADULT TUMOR TYPE (increased cancer risk) HIGH Gastroesophageal (15) Cerebral cortex (neurons and glia) Breast (6) Ovary (follicles and corpus luteum) Small bowel (15) Salivary glands (serous acini) Skeletal muscle Colorectal (15) Testis (developing, mature spermatozoa) Pancreas (22-130) Tonsil (epithelia) Gynecological (8.5) Breast (6) Lung(4-9) MODERATE Breast Colon (surface epithelium) Endometrium (glandular epithelium) Heart Kidney (tubules) Pancreas (islets) Respiratory epithelia (except goblet cells) Small Intestine (villous epithelium) Thyroid (follicular cells) EMBRYO HIGH Small intestine Stomach MODERATE Colon Heart Kidney Lung Pancreas Esophagus Figure 1 LKB1 protein-expression profile in normal tissues and pattern of tumor susceptibility in PJS patients. (a) Levels of LKB1 protein immunostaining in adult and embryonic human normal tissues. (b) Tumor spectrum in patients with PJS. The increased risk of each type of tumor is cited in parentheses. PJS, Peutz–Jeghers syndrome. remaining patients (Wang et al., 1999a; Alhopuro et al., sporadic origin screened to date. When first identified as 2005). Several chromosomal regions were thought to the gene responsible for PJS, LKB1 was tested for contain a second PJS locus, such as 19q, but genes inactivating mutations in a variety of sporadic tumors. within these regions do not contain LKB1 mutations Although tumor-specific LKB1 alterations have been (Buchet-Poyau et al., 2002). More recently, the use of identified in many of these tumor types, their frequency specific technical approaches, such as multiplex ligation- is extremely low. Table 1 summarizes most of the LKB1 dependent probe amplification, which allows the identi- mutations found in sporadic cancer to date, including fication of large-scale gene deletions, has improved the cancer cell lines and primary tumors of various origins. detection of LKB1 alterations in PJS patients by up to The mutational screening method is also indicated. 80% (Hearle et al., 2006b; Volikos et al., 2006). Thus, LKB1 mutations are present in about 4% of pancreatic these results indicate that LKB1 is the main causal gene cancers (cell lines and primary tumors from xenografts), in PJS, lessening the probability of there being a second but no mutations have been reported in breast, color- PJS locus. ectal or gastric cancer. The exception is non-small-cell lung cancer (NSCLC), in which LKB1 inactivation is a common event (Sanchez-Cespedes et al., 2002; Carretero Is LKB1 involved in the carcinogenesis of sporadic et al., 2004; Matsumoto et al., 2007). These differences tumors? The example of lung cancer are puzzling because lung cancer risk is higher but is not among the commonest tumors that occur in PJS. Before As described above, PJS patients have an increased risk ruling out the LKB1 tumor-suppressor role in sporadic of several types of cancer. Unexpectedly, LKB1 is tumors other than in lung, the obstacles associated with infrequently mutated in most of the tumor types of the detection of mutations in tumors need to be Oncogene Role of LKB1 in sporadic tumors M Sanchez-Cespedes 7827 Table 1 Frequency of LKB1 mutations in primary tumors and cancer cell lines of sporadic origin Tumor type No of tumors % Mutationsa Methodb Reference Cancer cell lines Breast 17 0% Sequencing Bignell et al. (1998) 5 0% Sequencing Ikediobi et al. (2006) Colorectal 7 0% Sequencing Ikediobi et al. (2006) Gliomas 6 0% Sequencing Ikediobi et al. (2006) HNSCC 8 12.5% Sequencing Qiu et al. (2006) Lung Adenocarcinomas/LCC 11 54% Sequencing Carretero et al. (2004) 7 43% Sequencing Ikediobi et al. (2006) 38 42% Sequencing Matsumoto et al. (2007) Squamous cell carcinomas 11 27% Sequencing Matsumoto et al. (2007) Small-cell lung cancer 11 0% Sequencing Carretero et al. (2004) 19 5% Sequencing Matsumoto et al. (2007) Melanoma 6 0% SSCP Avizienyte et al. (1999) 35 6% DGGE Guldberg et al. (1999) 16 6% SSCP Rowan et al. (1999) 9 0% Sequencing Ikediobi et al. (2006) Myeloma 8 0% SSCP Avizienyte et al. (1999) Pancreas 11 0% Sequencing Su et al. (1999) Prostate 2 50% Sequencing Ikediobi et al. (2006) Ovary 7 0% Sequencing Ikediobi et al. (2006) Renal 8 0% Sequencing Ikediobi et al. (2006) Primary tumors Breast 62 0% Sequencing Bignell et al. (1998) Cervix Squamous cell carcinoma 18 0% SSCP Avizienyte et al. (1999) 15 0% SSCP Kuragaki et al. (2003) Adenocarcinoma 8 12.5% SSCP Avizienyte et al. (1999) 244%SSCP Kuragaki et al. (2003) MDA 11 55% SSCP Kuragaki et al. (2003) 8 0% Sequencing Connolly et al. (2000) Colorectal 33 0% SSCP Avizienyte et al. (1998) Gastric 8 0% SSCP Avizienyte et al. (1999) HNSCC 7 0% Sequencing Qiu et al. (2006) Liver 80 1% SSCP Kim et al. (2004) Lung Adenocarcinomas 12 8% SSCP Avizienyte et al.
Recommended publications
  • Deletion of Stk11 and Fos in Mouse BLA Projection Neurons
    RESEARCH ARTICLE Deletion of Stk11 and Fos in mouse BLA projection neurons alters intrinsic excitability and impairs formation of long- term aversive memory David Levitan1†*, Chenghao Liu1†, Tracy Yang1, Yasuyuki Shima1, Jian-You Lin2,3, Joseph Wachutka2, Yasmin Marrero2, Ramin Ali Marandi Ghoddousi1, Eduardo da Veiga Beltrame2, Troy A Richter1, Donald B Katz2,3, Sacha B Nelson1,3* 1Departments of Biology, Brandeis University, Waltham, United States; 2Departments of Psychology, Brandeis University, Waltham, United States; 3Volen Center for Complex Systems, Brandeis University, Waltham, United States Abstract Conditioned taste aversion (CTA) is a form of one-trial learning dependent on basolateral amygdala projection neurons (BLApn). Its underlying cellular and molecular mechanisms remain poorly understood. RNAseq from BLApn identified changes in multiple candidate learning- related transcripts including the expected immediate early gene Fos and Stk11, a master kinase of the AMP-related kinase pathway with important roles in growth, metabolism and development, but not previously implicated in learning. Deletion of Stk11 in BLApn blocked memory prior to training, but not following it and increased neuronal excitability. Conversely, BLApn had reduced excitability following CTA. BLApn knockout of a second learning-related gene, Fos, also increased excitability and impaired learning. Independently increasing BLApn excitability chemogenetically during CTA *For correspondence: also impaired memory. STK11 and C-FOS activation were independent
    [Show full text]
  • Deletion of Stk11 and Fos in Mouse BLA Projection Neurons Alters Intrinsic 3 Excitability and Impairs Formation of Long-Term Aversive Memory
    bioRxiv preprint doi: https://doi.org/10.1101/787325; this version posted November 2, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 2 Deletion of Stk11 and Fos in mouse BLA projection neurons alters intrinsic 3 excitability and impairs formation of long-term aversive memory 4 5 6 Abbreviated Title: The role of Stk11 in memory formation 7 8 David Levitan2*, Chenghao Liu2*, Tracy Yang2, Yasuyuki Shima2, Jian-You Lin1, 3, Joseph 9 Wachutka1, Yasmin Marrero1, Ramin Ali Marandi Ghoddousi2, Eduardo da Veiga Beltrame1, 10 Donald B. Katz1, 3, Sacha B. Nelson2, 3 Departments of Psychology1, Biology2, and Volen Center for Complex Systems3, Brandeis University, Waltham, Massachusetts 02454, USA. 11 12 13 *D.L. and C.L. contributed equally 14 Proofs and correspondence to: 15 Sacha B Nelson, MD, PhD, Brandeis University 16 Department of Biology, MS 062, 415 South Street, Waltham, MA 02454, 17 Email: [email protected] 18 19 Declaration of Interest: The authors declare no competing financial interests. 20 Acknowledgements: This research was supported by the National Institute on Deafness and 21 Other Communication Disorders (NIDCD) DC006666 and by NINDS NS109916. 22 23 24 25 26 bioRxiv preprint doi: https://doi.org/10.1101/787325; this version posted November 2, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity.
    [Show full text]
  • An Emerging Acral Melanoma Oncogene
    www.impactjournals.com/oncotarget/ Oncotarget, Advance Publications 2011 NUAK2: an emerging acral melanoma oncogene Takeshi Namiki1,2, Sergio G. Coelho1, Vincent J. Hearing1 1 Laboratory of Cell Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD 20814, USA 2 Department of Dermatology, Yokohama Minato Red Cross Hospital, Yokohama, Kanagawa 231-0801, Japan Correspondence to: Dr. Takeshi Namiki, email: [email protected] Keywords: NUAK2, acral melanoma, migration, metastasis, oncogene Received: September 9, 2011, Accepted: September 10, 2011, Published: September 10, 2011 Copyright: © Namiki et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. ABSTRACT: Recent technological advances in cancer genomics make it possible to dissect complicated genomic aberrations of melanomas. In particular, several specific genomic aberrations including 11q13 amplification and KIT aberrations have been identified in acral melanomas. We recently identified NUAK2 at 1q32 as a promising oncogene in acral melanomas and reported its significant roles in tumorigenesis in melanoma cells using both in vitro and in vivo analyses. NUAK2 as a member of the AMPK family has several intriguing aspects both as an oncogene and as a tumor suppressor gene. Here we review genomic aberrations of melanomas focusing on acral melanomas to emphasize the possible roles
    [Show full text]
  • Inhibition of ERK 1/2 Kinases Prevents Tendon Matrix Breakdown Ulrich Blache1,2,3, Stefania L
    www.nature.com/scientificreports OPEN Inhibition of ERK 1/2 kinases prevents tendon matrix breakdown Ulrich Blache1,2,3, Stefania L. Wunderli1,2,3, Amro A. Hussien1,2, Tino Stauber1,2, Gabriel Flückiger1,2, Maja Bollhalder1,2, Barbara Niederöst1,2, Sandro F. Fucentese1 & Jess G. Snedeker1,2* Tendon extracellular matrix (ECM) mechanical unloading results in tissue degradation and breakdown, with niche-dependent cellular stress directing proteolytic degradation of tendon. Here, we show that the extracellular-signal regulated kinase (ERK) pathway is central in tendon degradation of load-deprived tissue explants. We show that ERK 1/2 are highly phosphorylated in mechanically unloaded tendon fascicles in a vascular niche-dependent manner. Pharmacological inhibition of ERK 1/2 abolishes the induction of ECM catabolic gene expression (MMPs) and fully prevents loss of mechanical properties. Moreover, ERK 1/2 inhibition in unloaded tendon fascicles suppresses features of pathological tissue remodeling such as collagen type 3 matrix switch and the induction of the pro-fbrotic cytokine interleukin 11. This work demonstrates ERK signaling as a central checkpoint to trigger tendon matrix degradation and remodeling using load-deprived tissue explants. Tendon is a musculoskeletal tissue that transmits muscle force to bone. To accomplish its biomechanical function, tendon tissues adopt a specialized extracellular matrix (ECM) structure1. Te load-bearing tendon compart- ment consists of highly aligned collagen-rich fascicles that are interspersed with tendon stromal cells. Tendon is a mechanosensitive tissue whereby physiological mechanical loading is vital for maintaining tendon archi- tecture and homeostasis2. Mechanical unloading of the tissue, for instance following tendon rupture or more localized micro trauma, leads to proteolytic breakdown of the tissue with severe deterioration of both structural and mechanical properties3–5.
    [Show full text]
  • Anti-STK11 / LKB1 Antibody (ARG59116)
    Product datasheet [email protected] ARG59116 Package: 50 μg anti-STK11 / LKB1 antibody Store at: -20°C Summary Product Description Rabbit Polyclonal antibody recognizes STK11 / LKB1 Tested Reactivity Hu Tested Application WB Host Rabbit Clonality Polyclonal Isotype IgG Target Name STK11 / LKB1 Antigen Species Human Immunogen Recombinant protein corresponding to K62-C430 of Human STK11 / LKB1. Conjugation Un-conjugated Alternate Names hLKB1; Serine/threonine-protein kinase STK11; Liver kinase B1; Renal carcinoma antigen NY-REN-19; LKB1; EC 2.7.11.1; PJS Application Instructions Application table Application Dilution WB 0.1 - 0.5 µg/ml Application Note * The dilutions indicate recommended starting dilutions and the optimal dilutions or concentrations should be determined by the scientist. Calculated Mw 49 kDa Properties Form Liquid Purification Affinity purification with immunogen. Buffer 0.9% NaCl, 0.2% Na2HPO4, 0.05% Sodium azide and 5% BSA. Preservative 0.05% Sodium azide Stabilizer 5% BSA Concentration 0.5 mg/ml Storage instruction For continuous use, store undiluted antibody at 2-8°C for up to a week. For long-term storage, aliquot and store at -20°C or below. Storage in frost free freezers is not recommended. Avoid repeated freeze/thaw cycles. Suggest spin the vial prior to opening. The antibody solution should be gently mixed before use. Note For laboratory research only, not for drug, diagnostic or other use. www.arigobio.com 1/3 Bioinformation Gene Symbol STK11 Gene Full Name serine/threonine kinase 11 Background This gene, which encodes a member of the serine/threonine kinase family, regulates cell polarity and functions as a tumor suppressor.
    [Show full text]
  • Neuronal Migration and Protein Kinases
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Frontiers - Publisher Connector REVIEW ARTICLE published: 13 January 2015 doi: 10.3389/fnins.2014.00458 Neuronal migration and protein kinases Toshio Ohshima* Laboratory for Molecular Brain Science, Department of Life Science and Medical Bioscience, Waseda University, Tokyo, Japan Edited by: The formation of the six-layered structure of the mammalian cortex via the inside-out Kazunori Nakajima, Keio University pattern of neuronal migration is fundamental to neocortical functions. Extracellular cues School of Medicine, Japan such as Reelin induce intracellular signaling cascades through the protein phosphorylation. Reviewed by: Migrating neurons also have intrinsic machineries to regulate cytoskeletal proteins and Mikio Hoshino, National Center of Neurology and Psychiatry, Japan adhesion properties. Protein phosphorylation regulates these processes. Moreover, the Shin-ichi Hisanaga, Tokyo balance between phosphorylation and dephosphorylation is modified by extracellular cues. Metropolitan University, Japan Multipolar-bipolar transition, radial glia-guided locomotion and terminal translocation are *Correspondence: critical steps of radial migration of cortical pyramidal neurons. Protein kinases such as Toshio Ohshima, Laboratory for Cyclin-dependent kinase 5 (Cdk5) and c-Jun N-terminal kinases (JNKs) involve these steps. Molecular Brain Science, Department of Life Science and In this review, I shall give an overview the roles of protein kinases in neuronal migration. Medical Bioscience, Waseda University, 2-2 Wakamatsu-cho, Keywords: protein phosphorylation, kinase, phosphatase, migration, cerebral cortex Shinjuku-ku, Tokyo 162-8480, Japan e-mail: [email protected] CYTOSKELETON DYNAMICS DURING NEURONAL proximal region of the leading process during the locomotion MIGRATION mode of migration (Nishimura et al., 2014).
    [Show full text]
  • Regulation of the Polarity Kinases PAR-1/MARK by 14-3-3 Interaction and Phosphorylation
    Research Article 4059 Regulation of the polarity kinases PAR-1/MARK by 14-3-3 interaction and phosphorylation Olga Göransson1,*,‡, Maria Deak1, Stephan Wullschleger1, Nick A. Morrice1, Alan R. Prescott2 and Dario R. Alessi1 1University of Dundee, MRC Protein Phosphorylation Unit, James Black Centre and 2University of Dundee, Division of Cell Biology and Immunology, MSI/WTB complex, Dow Street, Dundee, DD1 5EH, Scotland, UK *Present address: Lund University, BMC, C11, S-22184 Lund, Sweden ‡Author for correspondence (e-mail: [email protected]) Accepted 12 June 2006 Journal of Cell Science 119, 4059-4070 Published by The Company of Biologists 2006 doi:10.1242/jcs.03097 Summary Members of the PAR-1/MARK kinase family play critical membrane. We provide data indicating that the membrane roles in polarity and cell cycle control and are regulated by localisation of MARK3 required a highly conserved C- 14-3-3 scaffolding proteins, as well as the LKB1 tumour terminal domain, which has been termed kinase-associated suppressor kinase and atypical protein kinase C (PKC). domain-1 (KA-1). We also show that dissociation of 14-3-3 In this study, we initially investigated the mechanism from MARK3 did not affect catalytic activity, and that a underlying the interaction of mammalian MARK3 with MARK3 mutant, which could not interact with 14-3-3, was 14-3-3. We demonstrate that 14-3-3 binding to MARK3 normally active. Finally, we establish that there are is dependent on phosphorylation, and necessitates the significant differences in the subcellular localisation of phosphate-binding pocket of 14-3-3.
    [Show full text]
  • Table S1. Gene List Genes Chr Genes Chr Genes Chr Genes Chr SEPT9
    Table S1. Gene List Genes Chr Genes Chr Genes Chr Genes Chr SEPT9 17 EIF2AK3 2 MAPK14 6 RASSF5 1 AAK1 2 EIF2AK4 15 MAPK15 8 RAVER2 1 AATK 17 EIF2B5 3 MAPK3 16 RAX2 19 ABCA1 9 EIF3J 15 MAPK4 18 RB1 13 ABL1 9 EIF4A2 3 MAPK6 15 RBBP4 1 ABL2 1 EIF4B 12 MAPK7 17 RBBP5 1 ACTR2 2 EIF4E 4 MAPK8 10 RBBP8 18 ACVR1 2 EIF4E1B 5 MAPK8IP1 11 RBL1 20 ACVR1B 12 EIF4E2 2 MAPK8IP2 22 RBL2 16 ACVR1C 2 EIF4EBP1 8 MAPK8IP3 16 RBPJ 4 ACVR2A 2 ELF3 1 MAPK9 5 RBPJL 20 ACVR2B 3 ELF4 X MAPKAPK2 1 RBX1 22 ACVRL1 12 ELK1 X MAPKAPK3 3 RCHY1 4 ADAM17 2 ELK3 12 MAPKAPK5 12 REEP5 5 ADAM29 4 ELK4 1 MAPRE1 20 REL 2 ADAMTS15 11 EML4 2 MAPRE3 2 RELA 11 ADAMTS18 16 ENDOD1 11 MAPT 17 RELB 19 ADAMTSL3 15 ENDOG 9 MARK1 1 RET 10 ADCK1 14 EP300 22 MARK2 11 RFC1 4 ADCK2 7 EPAS1 2 MARK3 14 RFC2 7 ADCK3 1 EPCAM 2 MARK4 19 RFC3 13 ADCK4 19 EPHA1 7 MAST1 19 RFC4 3 ADCK5 8 EPHA10 1 MAST2 1 RFC5 12 ADORA1 1 EPHA2 1 MAST3 19 RFNG 17 ADRBK1 11 EPHA3 3 MAST4 5 RFWD2 1 ADRBK2 22 EPHA4 2 MASTL 10 RFX2 19 AGK 7 EPHA5 4 MATK 19 RHEB 7 AIFM1 X EPHA6 3 MAX 14 RHO 3 AIFM2 10 EPHA7 6 MBIP 14 RHOA 3 AIM1 6 EPHA8 1 MCC 5 RHOC 1 AIMP2 7 EPHB1 3 MCF2L2 3 RHOQ 2 AIP 11 EPHB2 1 MCL1 1 RICTOR 5 AKAP4 X EPHB3 3 MCM2 3 RIOK1 6 AKT1 14 EPHB4 7 MCM3 6 RIOK2 5 AKT1S1 19 EPHB6 7 MCM4 8 RIOK3 18 AKT2 19 EPS8 12 MCM5 22 RIPK1 6 AKT3 1 ERBB2 17 MCM6 2 RIPK2 8 ALK 2 ERBB3 12 MCM7 7 RIPK3 14 ALKBH1 14 ERBB4 2 MCM8 20 RIPK4 21 ALKBH2 12 ERC2 3 MDM2 12 RMI1 9 ALKBH3 11 ERCC1 19 MDM4 1 RNASEL 1 ALMS1 2 ERCC2 19 MECOM 3 RNF213 17 ALPK1 4 ERCC3 2 MED12 X RNF220 1 ALPK2 18 ERCC4 16 MED12L 3 ROCK1 18 ALPK3 15 ERCC5 13
    [Show full text]
  • Bi-Phospho-GSK3B(S21/29) Antibody Affinity Purified Rabbit Polyclonal Antibody (Pab) Catalog # Ap3111a
    10320 Camino Santa Fe, Suite G San Diego, CA 92121 Tel: 858.875.1900 Fax: 858.622.0609 Bi-Phospho-GSK3B(S21/29) Antibody Affinity Purified Rabbit Polyclonal Antibody (Pab) Catalog # AP3111a Specification Bi-Phospho-GSK3B(S21/29) Antibody - Product Information Application WB, IHC-P,E Primary Accession P49841 Reactivity Human, Mouse Host Rabbit Clonality Polyclonal Isotype Rabbit Ig Bi-Phospho-GSK3B(S21/29) Antibody - Additional Information Gene ID 2932 Other Names Glycogen synthase kinase-3 beta, GSK-3 The anti-Phospho-GSK3B-S21/29 Pab (Cat. beta, Serine/threonine-protein kinase #AP3111a) is used in Western blot to detect GSK3B, GSK3B Phospho-GSK3B-S21/29 in mouse thymus tissue lysate. Target/Specificity This GSK3B Antibody is generated from rabbits immunized with a KLH conjugated synthetic phosphopeptide corresponding to amino acid residues surrounding S21/29 of human GSK3B. Dilution WB~~1:1000 IHC-P~~1:50~100 Format Purified polyclonal antibody supplied in PBS with 0.09% (W/V) sodium azide. This antibody is purified through a protein A column, followed by peptide affinity purification. Formalin-fixed and paraffin-embedded human cancer tissue reacted with the Storage primary antibody, which was Maintain refrigerated at 2-8°C for up to 2 peroxidase-conjugated to the secondary weeks. For long term storage store at -20°C antibody, followed by AEC staining. This data in small aliquots to prevent freeze-thaw demonstrates the use of this antibody for cycles. immunohistochemistry; clinical relevance has not been evaluated. BC = breast carcinoma; Precautions HC = hepatocarcinoma. Bi-Phospho-GSK3B(S21/29) Antibody is for research use only and not for use in Page 1/4 10320 Camino Santa Fe, Suite G San Diego, CA 92121 Tel: 858.875.1900 Fax: 858.622.0609 diagnostic or therapeutic procedures.
    [Show full text]
  • On the Road from Gene to Therapy in Inherited Cardiomyopathies
    On the road from gene to therapy in Inherited Cardiomyopathies Limongelli Giuseppe1,2,3, Bossone Edoardo4, Elliott Perry Mark2,3, Day Sharlene5 1 Department of Cardiothoracic Sciences, Università della Campania “Luigi Vanvitelli”, Monaldi Hospital, AORN Colli, Naples, Italy 2 Institute of Cardiovascular Science, University College of London, London, UK 3 European Reference Network - GUARD HEART 4 Cardiology Division, University of Salerno, Salerno, Italy 5 Departments of Internal Medicine and Pediatrics, University of Michigan, Ann Arbor, Michigan, USA Key Words: inherited cardiomyopathies, genetics, therapy, precision medicine Summary: Almost 30 years after the discovery of the first genetic mutation for HCM, the deve- lopment of new pharmacological approaches targeting cardiomyopathies and other orphan/rare car- diac disease is becoming closer to reality. Development of targeted therapies is enabled by new in- sights into the clinical and molecular aspects, and pathogenesis of cardiomyopathies, along with the establishment of large-scale international collaboration and the increasing engagement of the phar- maceutical industry. The road toward “cardiovascular precision medicine” is just beginning, with inherited and rare diseases leading the way in this exciting new era. Key Points (3–5) • Cardiomyopathies are a heterogeneous group of myocardial disorders • Most are related to genetic abnormalities of the structural and functional proteins of the myocyte • The clinical course recognize 3 phases: preclinical, overt (concealed), and end stage disease • New insight on pathogenesis and mechanisms underlying inherited cardiomyopathies is opening the hope of present and future therapies Address for correspondence: Giuseppe Limongelli, MD, PhD, FESC Department of Cardiothoracic Sciences, Università della Campania “Luigi Vanvitelli”, Monaldi Hospital, AORN Colli, Naples, Italy Email: [email protected] The century that closed the second millennium was marked by enormous progress in all the life sci- ences, including medicine.
    [Show full text]
  • Autocrine IFN Signaling Inducing Profibrotic Fibroblast Responses By
    Downloaded from http://www.jimmunol.org/ by guest on September 23, 2021 Inducing is online at: average * The Journal of Immunology , 11 of which you can access for free at: 2013; 191:2956-2966; Prepublished online 16 from submission to initial decision 4 weeks from acceptance to publication August 2013; doi: 10.4049/jimmunol.1300376 http://www.jimmunol.org/content/191/6/2956 A Synthetic TLR3 Ligand Mitigates Profibrotic Fibroblast Responses by Autocrine IFN Signaling Feng Fang, Kohtaro Ooka, Xiaoyong Sun, Ruchi Shah, Swati Bhattacharyya, Jun Wei and John Varga J Immunol cites 49 articles Submit online. Every submission reviewed by practicing scientists ? is published twice each month by Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts http://jimmunol.org/subscription Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html http://www.jimmunol.org/content/suppl/2013/08/20/jimmunol.130037 6.DC1 This article http://www.jimmunol.org/content/191/6/2956.full#ref-list-1 Information about subscribing to The JI No Triage! Fast Publication! Rapid Reviews! 30 days* Why • • • Material References Permissions Email Alerts Subscription Supplementary The Journal of Immunology The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2013 by The American Association of Immunologists, Inc. All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. This information is current as of September 23, 2021. The Journal of Immunology A Synthetic TLR3 Ligand Mitigates Profibrotic Fibroblast Responses by Inducing Autocrine IFN Signaling Feng Fang,* Kohtaro Ooka,* Xiaoyong Sun,† Ruchi Shah,* Swati Bhattacharyya,* Jun Wei,* and John Varga* Activation of TLR3 by exogenous microbial ligands or endogenous injury-associated ligands leads to production of type I IFN.
    [Show full text]
  • Gene Expression Profile Associated with Response to Doxorubicin
    Cancer Therapy: Clinical Gene Expression Profile Associated with Response to Doxorubicin-Based Therapy in Breast Cancer Maria Aparecida Azevedo Koike Folgueira,1Dirce Maria Carraro,4 Helena Brentani,4 Diogo Ferreira da Costa Patra‹ o,5 Edson Mantovani Barbosa,6 Ma¤ rio Moura‹ oNetto,5 Jose¤ Roberto Fı´garo Caldeira,8 Maria Lucia Hirata Katayama,1Fernando Augusto Soares,5 Ce¤ lia Tosello Oliveira,6 Luiz Fernando Lima Reis,4 Jane Haruko Lima Kaiano,4 Luiz Paulo Camargo,4 Ricardo Zorzetto NicolielloVe“ ncio,7 Igor Moyse¤ s Longo Snitcovsky,2 Fabiana Baroni Alves Makdissi,5 Paulo Jose¤ da Silva e Silva,3 Joa‹ o Carlos Guedes Sampaio Go¤ es,6 and Maria Mitzi Brentani1 Abstract Purpose:This study was designed to identify genes that could predict response to doxorubicin- based primary chemotherapy in breast cancer patients. Experimental Design: Biopsy samples were obtained before primary treatment with doxorubi- cin and cyclophosphamide. RNA was extracted and amplified and gene expression was analyzed using cDNA microarrays. Results: Response to chemotherapy was evaluated in 51patients, and based on Response Eval- uation Criteria in Solid Tumors guidelines, 42 patients, who presented at least a partial response (z30% reduction in tumor dimension), were classified as responsive. Gene profile of samples, divided into training set (n = 38) and independent validation set (n = 13), were at first analyzed against a cDNA microarray platform containing 692 genes. Unsupervised clustering could not separate responders from nonresponders. A classifier was identified comprising EMILIN1, FAM14B,andPBEF, which however could not correctly classify samples included in the validation set. Our next step was to analyze gene profile in a more comprehensive cDNA microarray platform, containing 4,608 open reading frame expressed sequence tags.
    [Show full text]