BIO 221 Invertebrate Zoology I Spring 2010
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Memoirs of Museum Victoria 69: 355–363 (2012) ISSN 1447-2546 (Print) 1447-2554 (On-line) http://museumvictoria.com.au/About/Books-and-Journals/Journals/Memoirs-of-Museum-Victoria Some hydroids (Hydrozoa: Hydroidolina) from Dampier, Western Australia: annotated list with description of two new species. JEANETTE E. WATSON Honorary Research Associate, Marine Biology, Museum Victoria, PO Box 666, Melbourne, Victoria Australia 3001. ([email protected]) Abstract Jeanette E. Watson, 2012. Some hydroids (Hydrozoa: Hydroidolina) from Dampier, Western Australia: annotated list with description of two new species. Memoirs of Museum Victoria 69: 355–363. Eleven species of hydroids including two new (Halecium corpulatum and Plumularia fragilia) from a depth of 50 m, 50 km north of Dampier, Western Australia are reported. The tropical hydroid fauna of Western Australia is poorly known; species recorded here show strong affinity with the Indonesian and Indo–Pacific region. Keywords Hydroids, tropical species, Dampier, Western Australia Introduction Sertolaria racemosa Cavolini, 1785: 160, pl. 6, figs 1–7, 14–15 Sertularia racemosa. – Gmelin, 1791: 3854 A collection of hydroids provided by the Western Australian Eudendrium racemosum.– Ehrenberg, 1834: 296.– von Museum is described. The collection comprises 11 species Lendenfeld, 1885: 351, 353.– Millard and Bouillon, 1973: 33.– Watson, including two new. Material was collected 50 km north of 1985: 204, figs 63–67 Dampier, Western Australia, from the gas production platform Material examined. WAM Z31857, material ethanol preserved. Four Ocean Legend (019° 42' 18.04" S, 118° 42' 26.44" E). The infertile colonies, the tallest 40 mm long, on purple sponge. collection was made from a depth of 50 m by commercial divers on 4th August, 2011. -
Towards Understanding the Phylogenetic History of Hydrozoa: Hypothesis Testing with 18S Gene Sequence Data*
SCI. MAR., 64 (Supl. 1): 5-22 SCIENTIA MARINA 2000 TRENDS IN HYDROZOAN BIOLOGY - IV. C.E. MILLS, F. BOERO, A. MIGOTTO and J.M. GILI (eds.) Towards understanding the phylogenetic history of Hydrozoa: Hypothesis testing with 18S gene sequence data* A. G. COLLINS Department of Integrative Biology and Museum of Paleontology, University of California, Berkeley, CA 94720, USA SUMMARY: Although systematic treatments of Hydrozoa have been notoriously difficult, a great deal of useful informa- tion on morphologies and life histories has steadily accumulated. From the assimilation of this information, numerous hypotheses of the phylogenetic relationships of the major groups of Hydrozoa have been offered. Here I evaluate these hypotheses using the complete sequence of the 18S gene for 35 hydrozoan species. New 18S sequences for 31 hydrozoans, 6 scyphozoans, one cubozoan, and one anthozoan are reported. Parsimony analyses of two datasets that include the new 18S sequences are used to assess the relative strengths and weaknesses of a list of phylogenetic hypotheses that deal with Hydro- zoa. Alternative measures of tree optimality, minimum evolution and maximum likelihood, are used to evaluate the relia- bility of the parsimony analyses. Hydrozoa appears to be composed of two clades, herein called Trachylina and Hydroidolina. Trachylina consists of Limnomedusae, Narcomedusae, and Trachymedusae. Narcomedusae is not likely to be the basal group of Trachylina, but is instead derived directly from within Trachymedusae. This implies the secondary gain of a polyp stage. Hydroidolina consists of Capitata, Filifera, Hydridae, Leptomedusae, and Siphonophora. “Anthomedusae” may not form a monophyletic grouping. However, the relationships among the hydroidolinan groups are difficult to resolve with the present set of data. -
Deep‐Sea Coral Taxa in the U.S. Gulf of Mexico: Depth and Geographical Distribution
Deep‐Sea Coral Taxa in the U.S. Gulf of Mexico: Depth and Geographical Distribution by Peter J. Etnoyer1 and Stephen D. Cairns2 1. NOAA Center for Coastal Monitoring and Assessment, National Centers for Coastal Ocean Science, Charleston, SC 2. National Museum of Natural History, Smithsonian Institution, Washington, DC This annex to the U.S. Gulf of Mexico chapter in “The State of Deep‐Sea Coral Ecosystems of the United States” provides a list of deep‐sea coral taxa in the Phylum Cnidaria, Classes Anthozoa and Hydrozoa, known to occur in the waters of the Gulf of Mexico (Figure 1). Deep‐sea corals are defined as azooxanthellate, heterotrophic coral species occurring in waters 50 m deep or more. Details are provided on the vertical and geographic extent of each species (Table 1). This list is adapted from species lists presented in ʺBiodiversity of the Gulf of Mexicoʺ (Felder & Camp 2009), which inventoried species found throughout the entire Gulf of Mexico including areas outside U.S. waters. Taxonomic names are generally those currently accepted in the World Register of Marine Species (WoRMS), and are arranged by order, and alphabetically within order by suborder (if applicable), family, genus, and species. Data sources (references) listed are those principally used to establish geographic and depth distribution. Only those species found within the U.S. Gulf of Mexico Exclusive Economic Zone are presented here. Information from recent studies that have expanded the known range of species into the U.S. Gulf of Mexico have been included. The total number of species of deep‐sea corals documented for the U.S. -
166, December 2016
PSAMMONALIA The Newsletter of the International Association of Meiobenthologists Number 166, December 2016 Composed and Printed at: Lab. Of Biodiversity Dept. Of Life Science, College of Natural Sciences, Hanyang University, 222 Wangsimni–ro, Seongdong-gu, Seoul, 04763, Korea. Remembering the good times. Season’s Greetings, and Happy New Year! (2017) DONT FORGET TO RENEW YOUR MEMBERSHIP IN IAM! THE APPLICATION CAN BE FOUND AT: http://www.meiofauna.org/appform.html This newsletter is mailed electronically. Paper copies will be sent only upon request This Newsletter is not part of the scientific literature for taxonomic purposes 1 The International Association of Meiobenthologists Executive Committee Vadim Mokievsky P.P. Shirshov Institute of Oceanology, Russian Academy of Sciences, Chairperson 36 Nakhimovskiy Prospect, 117218 Moscow, Russia [[email protected]] Wonchoel Lee Lab. of Biodiversity, (#505), Department of Life Science, Past Chairperson College of Natural Sciences, Hanyang University. [[email protected]] Ann Vanreusel Ghent University, Biology Department, Marine Biology Section, Gent, Treasurer B-9000, Belgium [[email protected]] Jyotsna Sharma Department of Biology, University of Texas at San Antonio, San Antonio, Asistant Treasurer TX 78249-0661, USA [[email protected]] Hanan Mitwally Faculty of Science, Oceanography, University of Alexandria, (Term expires 2019) Moharram Bay, 21151, Egypt. [[email protected]] Gustavo Fonseca Universidade Federal de São Paulo, Instituto do Mar, Av. AlmZ Saldanha (Term expires 2019) da Gama 89, 11030-400 Santos, Brazil. [[email protected]] Daniel Leduc National Institute of Water and Atmospheric Research, (Term expires 2022) Private Bag 14-901, Wellington, New Zealand [[email protected]] Nabil Majdi Bielefeld University, Animal Ecology, Konsequenz 45, 33615, Bielefeld, (Term expires 2022) Germany [[email protected]] Ex-Officio Executive Committee (Past Chairpersons) 1966-67 Robert Higgins (Founding Editor) 1987-89 John Fleeger 1968-69 W. -
CURRICULUM VITAE NAME: (Dr.) Dhugal John Lindsay BORN
CURRICULUM VITAE NAME: (Dr.) Dhugal John Lindsay BORN: 30 March 1971; Rockhampton, Australia CURRENT ADDRESS: Japan Agency for Marine-Earth Science & Technology (JAMSTEC) 2-15 Natsushima-Cho Yokosuka, 237 Japan telephone: (046) 867-9563 telefax: (046) 867-9525 E-mail: [email protected] EDUCATION: University of Tokyo, Tokyo (1993-1998) Ph.D. in Aquatic Biology conferred July, 1998. M. Sc. in Agriculture and Life Sciences conferred March, 1995. University of Queensland, Brisbane (1989-1992) B.Sc. in Molecular Biology conferred December, 1992. (gpa: 6.5 of 7.0) B.A. in Japanese Studies conferred December, 1992. (gpa: 6.5 of 7.0) North Rockhampton State High School, Rockhampton (1984-1988) School Dux, 1988. CURRENT POSITIONS: October 2001 - present, Research Scientist, Japan Agency for Marine-Earth Science & Technology (JAMSTEC) August 2003 – present, Senior Lecturer (adjunct), Centre for Marine Studies, University of Queensland June 2006 – present, Associate Professor (adjunct), Yokohama Municipal University April 2007- present, Lecturer (adjunct), Nagasaki University April 2009 – present, Associate Professor (adjunct), Kitasato University April 2009 – present, Science and Technology Advisor, Yokohama Science Frontier High School PREVIOUS POSITION: May 1997 - October 2001, Associate Researcher, Japan Marine Science & Technology Center OBJECTIVE: A position in an organization where my combination of scientific expertise and considerable Japanese language and public relations skills is invaluable. PUBLICATIONS: In English Lindsay, D.J., Yoshida, H., Uemura, K., Yamamoto, H., Ishibashi, S., Nishikawa, J., Reimer, J.D., Fitzpatrick, R., Fujikura, K. and T. Maruyama. The untethered remotely-operated vehicle PICASSO-1 and its deployment from chartered dive vessels for deep sea surveys off Okinawa, Japan, and Osprey Reef, Coral Sea, Australia. -
Vanessa Shimabukuro Orientador: Antonio Carlos Marques
Dissertação apresentada ao Instituto de Biociências da Universidade de São Paulo, para a obtenção de Título de Mestre em Ciências, na Área de Zoologia Título: As associações epizóicas de Hydrozoa (Cnidaria: Leptothecata, Anthoathecata e Limnomedusae): I) Estudo faunístico de hidrozoários epizóicos e seus organismos associados; II) Dinâmica de comunidades bentônicas em substratos artificiais Aluna: Vanessa Shimabukuro Orientador: Antonio Carlos Marques Sumário Capítulo 1....................................................................................................................... 3 1.1 Introdução ao epizoísmo em Hydrozoa ...................................................... 3 1.2 Objetivos gerais do estudo ............................................................................ 8 1.3 Organização da dissertação .......................................................................... 8 1.4 Referências bibliográficas.............................................................................. 9 Parte I: Estudo faunístico de hidrozoários (Cnidaria, Hydrozoa) epizóicos e seus organismos associados ............................................................................. 11 Capítulo 2..................................................................................................................... 12 2.1 Abstract ............................................................................................................. 12 2.2 Resumo............................................................................................................. -
Benthic Data Sheet
DEMERSAL OTTER/BEAM TRAWL DATA SHEET RESEARCH VESSEL_____________________(1/20/13 Version*) CLASS__________________;DATE_____________;NAME:___________________________; DEVICE DETAILS_________ LOCATION (OVERBOARD): LAT_______________________; LONG______________________________ LOCATION (AT DEPTH): LAT_______________________; LONG_____________________________; DEPTH___________ LOCATION (START UP): LAT_______________________; LONG______________________________;.DEPTH__________ LOCATION (ONBOARD): LAT_______________________; LONG______________________________ TIME: IN______AT DEPTH_______START UP_______SURFACE_______.DURATION OF TRAWL________; SHIP SPEED__________; WEATHER__________________; SEA STATE__________________; AIR TEMP______________ SURFACE TEMP__________; PHYS. OCE. NOTES______________________; NOTES_______________________________ INVERTEBRATES Phylum Porifera Order Pennatulacea (sea pens) Class Calcarea __________________________________ Family Stachyptilidae Class Demospongiae (Vase sponge) _________________ Stachyptilum superbum_____________________ Class Hexactinellida (Hyalospongia- glass sponge) Suborder Subsessiliflorae Subclass Hexasterophora Family Pennatulidae Order Hexactinosida Ptilosarcus gurneyi________________________ Family Aphrocallistidae Family Virgulariidae Aphrocallistes vastus ______________________ Acanthoptilum sp. ________________________ Other__________________________________________ Stylatula elongata_________________________ Phylum Cnidaria (Coelenterata) Virgularia sp.____________________________ Other_______________________________________ -
Downloaded from Genbank (Table S1)
water Article Integrated Taxonomy for Halistemma Species from the Northwest Pacific Ocean Nayeon Park 1 , Andrey A. Prudkovsky 2,* and Wonchoel Lee 1,* 1 Department of Life Science, Hanyang University, Seoul 04763, Korea; [email protected] 2 Faculty of Biology, Lomonosov Moscow State University, 119991 Moscow, Russia * Correspondence: [email protected] (A.A.P.); [email protected] (W.L.) Received: 16 October 2020; Accepted: 20 November 2020; Published: 22 November 2020 Abstract: During a survey of the siphonophore community in the Kuroshio Extension, Northwest Pacific Ocean, a new Halistemma Huxley, 1859 was described using integrated molecular and morphological approaches. The Halistemma isabu sp. nov. nectophore is most closely related morphologically to H. striata Totton, 1965 and H. maculatum Pugh and Baxter, 2014. These species can be differentiated by their nectosac shape, thrust block size, ectodermal cell patches and ridge patterns. The new species’ bracts are divided into two distinct types according to the number of teeth. Type A bracts are more closely related to ventral bracts in H. foliacea (Quoy and Gaimard, 1833) while Type B bracts are more similar to H. rubrum (Vogt, 1852). Each type differs, however, from the proximal end shape, distal process and bracteal canal. Both of the new species’ morphological type and phylogenetic position within the genus Halistemma are supported by phylogenetic analysis of concatenated DNA dataset (mtCOI, 16S rRNA and 18S rRNA). Integrated morphological and molecular approaches to the taxonomy of siphonophores showed a clear delimitation of the new species from the congeners. Halistemma isabu sp. nov. is distributed with the congeners H. -
Expansion of a Single Transposable Element Family Is BRIEF REPORT Associated with Genome-Size Increase and Radiation in the Genus Hydra
Expansion of a single transposable element family is BRIEF REPORT associated with genome-size increase and radiation in the genus Hydra Wai Yee Wonga, Oleg Simakova,1, Diane M. Bridgeb, Paulyn Cartwrightc, Anthony J. Bellantuonod, Anne Kuhne, Thomas W. Holsteine, Charles N. Davidf, Robert E. Steeleg, and Daniel E. Martínezh,1 aDepartment of Molecular Evolution and Development, University of Vienna, 1010 Vienna, Austria; bDepartment of Biology, Elizabethtown College, Elizabethtown, PA 17022; cDepartment of Ecology & Evolutionary Biology, University of Kansas, Lawrence, KS 66045; dDepartment of Biological Sciences, Florida International University, Miami, FL 33199; eCentre for Organismal Biology, Heidelberg University, 69120 Heidelberg, Germany; fFaculty of Biology, Ludwig Maximilian University of Munich, 80539 Munich, Germany; gDepartment of Biological Chemistry, University of California, Irvine, CA 92617; and hDepartment of Biology, Pomona College, Claremont, CA 91711 Edited by W. Ford Doolittle, Dalhousie University, Halifax, NS, Canada, and approved October 8, 2019 (received for review July 9, 2019) Transposable elements are one of the major contributors to genome- Using transcriptome data, we searched for evidence of a ge- size differences in metazoans. Despite this, relatively little is known nome duplication event in the brown hydras. We found that 75% about the evolutionary patterns of element expansions and the (8,629 out of 11,543) of gene families had the same number of element families involved. Here we report a broad genomic sampling genes in both H. viridissima and H. vulgaris. Additionally, 84.7% within the genus Hydra, a freshwater cnidarian at the focal point of and 81.1% of the gene families contained a single gene from H. -
Toward a Global Reference Database of COI Barcodes for Marine Zooplankton
Marine Biology (2021) 168:78 https://doi.org/10.1007/s00227-021-03887-y REVIEW, CONCEPT, AND SYNTHESIS Toward a global reference database of COI barcodes for marine zooplankton Ann Bucklin1 · Katja T. C. A. Peijnenburg2,3 · Ksenia N. Kosobokova4 · Todd D. O’Brien5 · Leocadio Blanco‑Bercial6 · Astrid Cornils7 · Tone Falkenhaug8 · Russell R. Hopcroft9 · Aino Hosia10 · Silke Laakmann7,11 · Chaolun Li12 · Luis Martell10 · Jennifer M. Questel9 · Deborah Wall‑Palmer2 · Minxiao Wang12 · Peter H. Wiebe13 · Agata Weydmann‑Zwolicka14 Received: 6 February 2021 / Accepted: 18 April 2021 © The Author(s) 2021 Abstract Characterization of species diversity of zooplankton is key to understanding, assessing, and predicting the function and future of pelagic ecosystems throughout the global ocean. The marine zooplankton assemblage, including only metazoans, is highly diverse and taxonomically complex, with an estimated ~28,000 species of 41 major taxonomic groups. This review provides a comprehensive summary of DNA sequences for the barcode region of mitochondrial cytochrome oxidase I (COI) for identifed specimens. The foundation of this summary is the MetaZooGene Barcode Atlas and Database (MZGdb), a new open-access data and metadata portal that is linked to NCBI GenBank and BOLD data repositories. The MZGdb provides enhanced quality control and tools for assembling COI reference sequence databases that are specifc to selected taxonomic groups and/or ocean regions, with associated metadata (e.g., collection georeferencing, verifcation of species identifcation, molecular protocols), and tools for statistical analysis, mapping, and visualization. To date, over 150,000 COI sequences for ~ 5600 described species of marine metazoan plankton (including holo- and meroplankton) are available via the MZGdb portal. -
Report on Hydrozoans (Cnidaria), Excluding Stylasteridae, from the Emperor Seamounts, Western North Pacific Ocean
Zootaxa 4950 (2): 201–247 ISSN 1175-5326 (print edition) https://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2021 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4950.2.1 http://zoobank.org/urn:lsid:zoobank.org:pub:AD59B8E8-FA00-41AD-8AC5-E61EEAEEB2B1 Report on hydrozoans (Cnidaria), excluding Stylasteridae, from the Emperor Seamounts, western North Pacific Ocean DALE R. CALDER1,2* & LES WATLING3 1Department of Natural History, Royal Ontario Museum, 100 Queen’s Park, Toronto, Ontario, Canada M5S 2C6. 2Research Associate, Royal British Columbia Museum, 675 Belleville Street, Victoria, British Columbia, Canada V8W 9W2. 3School of Life Sciences, 216 Edmondson Hall, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA. [email protected]; https://orcid.org/0000-0002-6901-1168. *Corresponding author. [email protected]; https://orcid.org/0000-0002-7097-8763. Table of contents Abstract .................................................................................................202 Introduction .............................................................................................202 Materials and methods .....................................................................................203 Results .................................................................................................204 Systematic Account ........................................................................................204 Phylum Cnidaria Verrill, 1865 ...............................................................................204 -
(Cnidaria, Hydrozoa, Hydroidolina) from the West Coast of Sweden, with a Checklist of Species from the Region
Zootaxa 3171: 1–77 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Monograph ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) ZOOTAXA 3171 On a collection of hydroids (Cnidaria, Hydrozoa, Hydroidolina) from the west coast of Sweden, with a checklist of species from the region DALE R. CALDER Department of Natural History, Royal Ontario Museum, 100 Queen’s Park, Toronto, Ontario, Canada M5S 2C6 E-mail: [email protected] Magnolia Press Auckland, New Zealand Accepted by A. Collins: 30 Nov. 2011; published: 24 Jan. 2012 Dale R. Calder On a collection of hydroids (Cnidaria, Hydrozoa, Hydroidolina) from the west coast of Sweden, with a checklist of species from the region (Zootaxa 3171) 77 pp.; 30 cm. 24 Jan. 2012 ISBN 978-1-86977-855-2 (paperback) ISBN 978-1-86977-856-9 (Online edition) FIRST PUBLISHED IN 2012 BY Magnolia Press P.O. Box 41-383 Auckland 1346 New Zealand e-mail: [email protected] http://www.mapress.com/zootaxa/ © 2012 Magnolia Press All rights reserved. No part of this publication may be reproduced, stored, transmitted or disseminated, in any form, or by any means, without prior written permission from the publisher, to whom all requests to reproduce copyright material should be directed in writing. This authorization does not extend to any other kind of copying, by any means, in any form, and for any purpose other than private research use. ISSN 1175-5326 (Print edition) ISSN 1175-5334 (Online edition) 2 · Zootaxa 3171 © 2012 Magnolia Press CALDER Table of contents Abstract . 4 Introduction . 4 Material and methods .