Biogeography and Taxonomy of Pyrenomycetous Fungi 3. the Area Around the Sea of Japan
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FAMILIA PHAKOPSORACEAE ( Fungi: Uredinales) GENERALIDADES Y AFINIDADES
Familia Phakopsoraceae..... FAMILIA PHAKOPSORACEAE ( Fungi: Uredinales) GENERALIDADES Y AFINIDADES Pablo Buriticá Céspedes1 RESUMEN Se presentan aspectos generales sobre importancia de la familia Phakopsoraceae, afinidad y relaciones filogenéticas entre géneros, rango de hospedantes, distribución geográfica y ciclos de vida. Palabras clave: Uredinales, Phakopsoraceae. ABSTRACT General aspects in the Phakopsoraceae family importance, philogenetic affinities within genera, hosts range, geografic distribution and life cycles are presented. Key words: Uredinales, Phakopsoraceae. INTRODUCCION Dentro del concepto de clasificación taxonómica, la agrupación en familias, para el Orden Uredinales (Fungi: Basidiomycota: Heterobasidiomycia), no ha sido aún, bien desarrollado y por ende su uso común y rutinario es incipiente, obviado o rechazado. Sin embargo, en los últimos años se ha despertado mucho interés en este tópico, dentro de los Uredinólogos, debido a los avances obtenidos en el conocimiento de los distintos géneros estudiados como grupos (Cummins, 1959; Cummins e Hiratsuka, 1983); al valor taxonómico de los espermogonios en el nivel supragenérico (Hiratsuka y Cummins, 1963); a los estudios globales de los uredinios (Sathe, 1977); a los estudios de evolución, diversidad y delimitación de grupos de géneros dentro de las familias u órdenes de las plantas hospedantes (Leppik, 1972; Savile, 1976, 1979); a los estudios morfológicos aplicados a las variantes evolutivas de las estructuras en los ciclos de vida (Hennen y Buriticá, 1980), especialmente, en Endophyllaceae (Buriticá, 1991) y Pucciniosireae (Buriticá y Hennen, 1980); a los estudios sobre la ontogenia de los esporos (Hughes, 1970); y, al tratamiento sistemático de varios grupos, como Pucciniosireae (Buriticá y Hennen, 1980), géneros Chaconiaceos (Ono, 1983), Raveneliaceae (Leppik, 1972; Savile, 1989) y Phakopsoraceae (Buriticá, 1994, 1998). -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Phakopsora Cherimoliae (Lagerh.) Cummins 1941
-- CALIFORNIA D EPAUMENT OF cdfa FOOD & AGRICULTURE ~ California Pest Rating Proposal for Phakopsora cherimoliae (Lagerh.) Cummins 1941 Annona rust Domain: Eukaryota, Kingdom: Fungi Division: Basidiomycota, Class: Pucciniomycetes Order: Pucciniales, Family: Phakopsoraceae Current Pest Rating: Q Proposed Pest Rating: A Comment Period: 12/07/2020 through 01/21/2021 Initiating Event: In September 2019, San Diego County agricultural inspectors collected leaves from a sugar apple tree (Annona squamosa) shipping from a commercial nursery in Fort Myers, Florida to a resident of Oceanside. CDFA plant pathologist Cheryl Blomquist identified in pustules on the leaves a rust pathogen, Phakopsora cherimoliae, which is not known to occur in California. She gave it a temporary Q-rating. In October 2020, Napa County agricultural inspectors sampled an incoming shipment of Annona sp. from Pearland, Texas, that was shipped to a resident of American Canyon. This sample was also identified by C. Blomquist as P. cherimoliae. The status of this pathogen and the threat to California are reviewed herein, and a permanent rating is proposed. History & Status: Background: The Phakopsoraceae are a family of rust fungi in the order Pucciniales. The genus Phakopsora comprises approximately 110 species occurring on more than 30 dicotyledonous plant families worldwide, mainly in the tropics (Kirk et al., 2008). This genus holds some very important and damaging pathogen species including Phakopsora pachyrhizi on soybeans, P. euvitis on grapevine, and P. gossypii on cotton. Phakopsora cherimoliae occurs from the southern USA (Florida, Texas) in the north to northern Argentina in the south (Beenken, 2014). -- CALIFORNIA D EPAUMENT OF cdfa FOOD & AGRICULTURE ~ Annona is a genus of approximately 140 species of tropical trees and shrubs, with the majority of species native to the Americas, with less than 10 native to Africa. -
Current Status of Research on Rust Fungi (Pucciniales) in India
Asian Journal of Mycology 4(1): 40–80 (2021) ISSN 2651-1339 www.asianjournalofmycology.org Article Doi 10.5943/ajom/4/1/5 Current status of research on Rust fungi (Pucciniales) in India Gautam AK1, Avasthi S2, Verma RK3, Devadatha B 4, Sushma5, Ranadive KR 6, Bhadauria R2, Prasher IB7 and Kashyap PL8 1School of Agriculture, Abhilashi University, Mandi, Himachal Pradesh, India 2School of Studies in Botany, Jiwaji University, Gwalior, Madhya Pradesh, India 3Department of Plant Pathology, Punjab Agricultural University, Ludhiana, Punjab, India 4 Fungal Biotechnology Lab, Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry, India 5Department of Biosciences, Chandigarh University Gharuan, Punjab, India 6Department of Botany, P.D.E.A.’s Annasaheb Magar Mahavidyalaya, Mahadevnagar, Hadapsar, Pune, Maharashtra, India 7Department of Botany, Mycology and Plant Pathology Laboratory, Panjab University Chandigarh, India 8ICAR-Indian Institute of Wheat and Barley Research (IIWBR), Karnal, Haryana, India Gautam AK, Avasthi S, Verma RK, Devadatha B, Sushma, Ranadive KR, Bhadauria R, Prasher IB, Kashyap PL 2021 – Current status of research on Rust fungi (Pucciniales) in India. Asian Journal of Mycology 4(1), 40–80, Doi 10.5943/ajom/4/1/5 Abstract Rust fungi show unique systematic characteristics among all fungal groups. A single species of rust fungi may produce up to five morphologically and cytologically distinct spore-producing structures thereby attracting the interest of mycologist for centuries. In India, the research on rust fungi started with the arrival of foreign visiting scientists or emigrant experts, mainly from Britain who collected fungi and sent specimens to European laboratories for identification. Later on, a number of mycologists from India and abroad studied Indian rust fungi and contributed a lot to knowledge of the rusts to the Indian Mycobiota. -
Master Thesis
Swedish University of Agricultural Sciences Faculty of Natural Resources and Agricultural Sciences Department of Forest Mycology and Plant Pathology Uppsala 2011 Taxonomic and phylogenetic study of rust fungi forming aecia on Berberis spp. in Sweden Iuliia Kyiashchenko Master‟ thesis, 30 hec Ecology Master‟s programme SLU, Swedish University of Agricultural Sciences Faculty of Natural Resources and Agricultural Sciences Department of Forest Mycology and Plant Pathology Iuliia Kyiashchenko Taxonomic and phylogenetic study of rust fungi forming aecia on Berberis spp. in Sweden Uppsala 2011 Supervisors: Prof. Jonathan Yuen, Dept. of Forest Mycology and Plant Pathology Anna Berlin, Dept. of Forest Mycology and Plant Pathology Examiner: Anders Dahlberg, Dept. of Forest Mycology and Plant Pathology Credits: 30 hp Level: E Subject: Biology Course title: Independent project in Biology Course code: EX0565 Online publication: http://stud.epsilon.slu.se Key words: rust fungi, aecia, aeciospores, morphology, barberry, DNA sequence analysis, phylogenetic analysis Front-page picture: Barberry bush infected by Puccinia spp., outside Trosa, Sweden. Photo: Anna Berlin 2 3 Content 1 Introduction…………………………………………………………………………. 6 1.1 Life cycle…………………………………………………………………………….. 7 1.2 Hyphae and haustoria………………………………………………………………... 9 1.3 Rust taxonomy……………………………………………………………………….. 10 1.3.1 Formae specialis………………………………………………………………. 10 1.4 Economic importance………………………………………………………………... 10 2 Materials and methods……………………………………………………………... 13 2.1 Rust and barberry -
A New Species, Dicheirinia Panamensis, and New Records of Rust Fungi from Panama
Mycol Progress (2007) 6:81–91 DOI 10.1007/s11557-007-0526-0 ORIGINAL ARTICLE A new species, Dicheirinia panamensis, and new records of rust fungi from Panama José R. Hernández & Meike Piepenbring & Maritza Betzaida Vega Rios Received: 13 July 2006 /Revised: 15 November 2006 /Accepted: 19 January 2007 /Published online: 11 April 2007 # German Mycological Society and Springer-Verlag 2007 Abstract Based on a recent fieldwork in Panama, 25 species Jackson (1926), Standley (1927), Kern and Chardón of rust fungi and several new hosts are reported for the first (1927), Kern (1938), Hennen and Cummins (1956), Jørstad time from this country. Among the new records is one new (1957), Toler et al. (1959), Ramachar and Cummins (1965), species, Dicheirinia panamensis on Cojoba rufescens Cummins (1978), Buriticá and Hennen (1980), Ono and (Fabaceae). It differs from known species in the genus Hennen (1983), Hennen and McCain (1993), Buriticá Dicheirinia by the presence of uredinia and telia without (1999a, b), Berndt (2002), Hernández and Hennen (2003), paraphyses, irregularly tuberculate urediniospores with two Hernández et al. (n.d.), and Piepenbring (2005). In total, germ pores on the flattened sides, and tuberculate telio- only about 67 species of rust fungi are known from Panama spores formed by three probasidial cells, subtended by a (Piepenbring 2006), although diversity of plants is very pedicel with three hyaline, apical cells. high and rusts are common in this country. Several days of intensive field work in Panama yielded numerous new records of rust species, new host records, Introduction and a species of Dicheirinia on Fabaceae that is different from all known species and therefore described as new. -
1. Padil Species Factsheet Scientific Name: Common Name Image Library Partners for New Zealand Biosecurity Image Library
1. PaDIL Species Factsheet Scientific Name: Cerotelium fici (E.J. Butler) Arthur (Basidiomycota: Pucciniomycotina: Pucciniomycetes: Pucciniales: Phakopsoraceae) Common Name Cerotelium fici Live link: http://www.padil.gov.au/maf-border/Pest/Main/143006 Image Library New Zealand Biosecurity Live link: http://www.padil.gov.au/maf-border/ Partners for New Zealand Biosecurity image library Landcare Research — Manaaki Whenua http://www.landcareresearch.co.nz/ MPI (Ministry for Primary Industries) http://www.biosecurity.govt.nz/ 2. Species Information 2.1. Details Specimen Contact: Eric McKenzie - [email protected] Author: McKenzie, E. Citation: McKenzie, E. (2013) Cerotelium fici(Cerotelium fici)Updated on 3/20/2014 Available online: PaDIL - http://www.padil.gov.au Image Use: Free for use under the Creative Commons Attribution-NonCommercial 4.0 International (CC BY- NC 4.0) 2.2. URL Live link: http://www.padil.gov.au/maf-border/Pest/Main/143006 2.3. Facets Commodity Overview: Field Crops and Pastures Commodity Type: Figs & Breadfruit Distribution: Oceania Groups: Fungi & Mushrooms Host Family: Moraceae Pest Status: 1 NZ - Non-regulated species Status: NZ - Exotic 2.4. Other Names Kuehneola fici E.J. Butler Uredo fici Cast. 2.5. Diagnostic Notes **Disease** Leaf rust. Uredinial pustules mainly hypophyllous and on fruit, scattered or sometimes tending to be grouped around edge of leaf or in dew-drop runs on lamina, very pale reddish brown, often on reddish brown angular leaf spots (corresponding brown spots on upper surface coalescing and becoming necrotic), pulverulent, circular, up to 0.5 mm diam. Infected plants shed foliage prematurely, leaving immature fruit on the tree. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
Molecular Systematics of the Sordariales: the Order and the Family Lasiosphaeriaceae Redefined
Mycologia, 96(2), 2004, pp. 368±387. q 2004 by The Mycological Society of America, Lawrence, KS 66044-8897 Molecular systematics of the Sordariales: the order and the family Lasiosphaeriaceae rede®ned Sabine M. Huhndorf1 other families outside the Sordariales and 22 addi- Botany Department, The Field Museum, 1400 S. Lake tional genera with differing morphologies subse- Shore Drive, Chicago, Illinois 60605-2496 quently are transferred out of the order. Two new Andrew N. Miller orders, Coniochaetales and Chaetosphaeriales, are recognized for the families Coniochaetaceae and Botany Department, The Field Museum, 1400 S. Lake Shore Drive, Chicago, Illinois 60605-2496 Chaetosphaeriaceae respectively. The Boliniaceae is University of Illinois at Chicago, Department of accepted in the Boliniales, and the Nitschkiaceae is Biological Sciences, Chicago, Illinois 60607-7060 accepted in the Coronophorales. Annulatascaceae and Cephalothecaceae are placed in Sordariomyce- Fernando A. FernaÂndez tidae inc. sed., and Batistiaceae is placed in the Euas- Botany Department, The Field Museum, 1400 S. Lake Shore Drive, Chicago, Illinois 60605-2496 comycetes inc. sed. Key words: Annulatascaceae, Batistiaceae, Bolini- aceae, Catabotrydaceae, Cephalothecaceae, Ceratos- Abstract: The Sordariales is a taxonomically diverse tomataceae, Chaetomiaceae, Coniochaetaceae, Hel- group that has contained from seven to 14 families minthosphaeriaceae, LSU nrDNA, Nitschkiaceae, in recent years. The largest family is the Lasiosphaer- Sordariaceae iaceae, which has contained between 33 and 53 gen- era, depending on the chosen classi®cation. To de- termine the af®nities and taxonomic placement of INTRODUCTION the Lasiosphaeriaceae and other families in the Sor- The Sordariales is one of the most taxonomically di- dariales, taxa representing every family in the Sor- verse groups within the Class Sordariomycetes (Phy- dariales and most of the genera in the Lasiosphaeri- lum Ascomycota, Subphylum Pezizomycotina, ®de aceae were targeted for phylogenetic analysis using Eriksson et al 2001). -
Alternative Hosts of Phakopsora Pachyrhizi in the Americas: an Analysis of Their Role in the Epidemiology of Asian Soybean Rust in the Continental U.S
Iowa State University Capstones, Theses and Retrospective Theses and Dissertations Dissertations 2007 Alternative hosts of Phakopsora pachyrhizi in the Americas: an analysis of their role in the epidemiology of Asian soybean rust in the continental U.S. Oscar Pérez-Hernández Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/rtd Part of the Agricultural Science Commons, Agronomy and Crop Sciences Commons, and the Plant Pathology Commons Recommended Citation Pérez-Hernández, Oscar, "Alternative hosts of Phakopsora pachyrhizi in the Americas: an analysis of their role in the epidemiology of Asian soybean rust in the continental U.S." (2007). Retrospective Theses and Dissertations. 15097. https://lib.dr.iastate.edu/rtd/15097 This Thesis is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Retrospective Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. Alternative hosts of Phakopsora pachyrhizi in the Americas: an analysis of their role in the epidemiology of Asian soybean rust in the continental U.S. by Oscar Pérez-Hernández A thesis submitted to the graduate faculty in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Major: Plant Pathology Program of Study Committee: Xiao Bing Yang, Major Professor Mark L. Gleason Eugene S. Takle Iowa State University Ames, Iowa 2007 UMI Number: 1446133 UMI Microform 1446133 Copyright 2007 by ProQuest Information and Learning Company. All rights reserved. This microform edition is protected against unauthorized copying under Title 17, United States Code. -
Complete Taxonomy for the ATBI Fungi Project Organism Group: Fungi
Complete Taxonomy for the ATBI Fungi Project Organism Group: Fungi DOMAIN, KINGDOM PHYLUM CLASS ORDER FAMILY Eucarya, Fungi Ascomycota Ascomycetes Ascomycetes_order Ascomycetes_family Eucarya, Fungi Ascomycota Ascomycetes Ascomycetes_order Pseudeurotiaceae Eucarya, Fungi Ascomycota Ascomycota_class Ascomycota_order Ascomycota_family Eucarya, Fungi Ascomycota Ascomycota_class Nectriales Clavicipitaceae Eucarya, Fungi Ascomycota Dothideomycetes Dothideales Dothideales_family Eucarya, Fungi Ascomycota Dothideomycetes Dothideomycetes_order Dothideomycetes_family Eucarya, Fungi Ascomycota Dothideomycetes Hysteriales Hysteriaceae Eucarya, Fungi Ascomycota Dothideomycetes Mytilinidiales Mytilinidiaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Dacampiaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Page 1 of 8 Complete Taxonomy for the ATBI Fungi Project Organism Group: Fungi DOMAIN, KINGDOM PHYLUM CLASS ORDER FAMILY Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Lophiostomataceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Massarinaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Melanommataceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Pleomassariaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Pleosporales Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Pleosporales_family Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Sporormiaceae Eucarya, Fungi Ascomycota Dothideomycetes -
Variation in the Internal Transcribed Spacer Region of Phakopsora Pachyrhizi and Implications for Molecular Diagnostic Assays
Plant Disease • XXXX • XXX:X-X • https://doi.org/10.1094/PDIS-08-18-1426-RE Variation in the Internal Transcribed Spacer Region of Phakopsora pachyrhizi and Implications for Molecular Diagnostic Assays Tomas´ Allen Rush,1,2 Jacob Golan,3 Alistair McTaggart,4 Cade Kane,5 R. W. Schneider,1 and M. Catherine Aime5,† 1 Department of Plant Pathology and Crop Physiology, Louisiana State University Agricultural Center, Baton Rouge, LA 70803, U.S.A. 2 Department of Plant Pathology, University of Wisconsin, Madison, WI 53706, U.S.A. 3 Departments of Botany and Bacteriology, University of Wisconsin, Madison, WI 53706, U.S.A. 4 Queensland Alliance for Agriculture and Food Innovation, University of Queensland, Ecosciences Precinct, Brisbane, Queens- land 4001, Australia 5 Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN 47907, U.S.A. Abstract Phakopsora pachyrhizi, the causal agent of soybean rust (SBR), is a the presence of polymorphic ITS copies within single leaf samples and global threat to soybean production. Since the discovery of SBR in the within single rust sori. The diagnostic assays were not affected by poly- continental United States, quantitative polymerase chain reaction assays morphisms in the ITS region; however, current assays are at risk of false based on the internal transcribed spacer (ITS) ribosomal DNA locus were positives when screened against other species of Phakopsora. This study established for its rapid detection. However, insufficient data were ini- raises caveats to the use of multicopy genes (e.g., ITS) in single-gene de- tially available to test assays against factors that could give rise to mis- tection assays and discusses the pitfalls of inferences concerning the identification.