Influence of Anthropogenic Factors on the Diversity and Structure
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Karyotype and Genome Size Determination of Jarilla Chocola, an Additional Sister Clade of Carica Papaya
POJ 14(01):50-56 (2021) ISSN:1836-3644 doi: 10.21475/POJ.14.01.21.p2944 Karyotype and genome size determination of Jarilla chocola, an additional sister clade of Carica papaya Dessireé Patricia Zerpa-Catanho1, Tahira Jatt2, Ray Ming1* 1Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA 2Department of Botany, Shah Abdul Latif University, Khaipur, Sindh, 66020, Pakistan *Corresponding author: [email protected] Abstract Jarilla chocola is an herbaceous plant species that belongs to the Jarilla genus and the Caricaceae family. No information on chromosome number or genome size has been reported for J. chocola that confirms the occurrence of dysploidy events and explore the existence of heteromorphic sex chromosomes. Therefore, the total number of chromosomes of this species was determined by karyotyping and counting the number of chromosomes observed, and the genome size of female and male plants was estimated separately by flow cytometry. Results showed that J. chocola has eight pairs of chromosomes (2n = 2x = 16), and its chromosomes are classified as metacentric for five pairs, submetacentric for two pairs and telocentric for one pair. The nuclear DNA content (1C- value) in picograms and diploid genome size was estimated separately from female and male plants using two species as the standards, Phaseolus vulgaris (1C = 0.60 pg) and Carica papaya (1C = 0.325 pg), to look for the possible existence of heteromorphic sex chromosomes. C. papaya proved to be a better standard for the determination of J. chocola DNA content and diploid genome size. No significant difference on the DNA content was observed between female (1C = 1.02 ± 0.003 pg) and male (1C = 1.02 ± 0.008 pg) plants. -
Diversity and Endemism of Woody Plant Species in the Equatorial Pacific Seasonally Dry Forests
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Springer - Publisher Connector Biodivers Conserv (2010) 19:169–185 DOI 10.1007/s10531-009-9713-4 ORIGINAL PAPER Diversity and endemism of woody plant species in the Equatorial Pacific seasonally dry forests Reynaldo Linares-Palomino Æ Lars Peter Kvist Æ Zhofre Aguirre-Mendoza Æ Carlos Gonzales-Inca Received: 7 October 2008 / Accepted: 10 August 2009 / Published online: 16 September 2009 Ó The Author(s) 2009. This article is published with open access at Springerlink.com Abstract The biodiversity hotspot of the Equatorial Pacific region in western Ecuador and northwestern Peru comprises the most extensive seasonally dry forest formations west of the Andes. Based on a recently assembled checklist of the woody plants occurring in this region, we analysed their geographical and altitudinal distribution patterns. The montane seasonally dry forest region (at an altitude between 1,000 and 1,100 m, and the smallest in terms of area) was outstanding in terms of total species richness and number of endemics. The extensive seasonally dry forest formations in the Ecuadorean and Peruvian lowlands and hills (i.e., forests below 500 m altitude) were comparatively much more species poor. It is remarkable though, that there were so many fewer collections in the Peruvian departments and Ecuadorean provinces with substantial mountainous areas, such as Ca- jamarca and Loja, respectively, indicating that these places have a potentially higher number of species. We estimate that some form of protected area (at country, state or private level) is currently conserving only 5% of the approximately 55,000 km2 of remaining SDF in the region, and many of these areas protect vegetation at altitudes below 500 m altitude. -
A Comparative Survey of Genetic Diversity Among a Set of Caricaceae
Sengupta et al. SpringerPlus 2013, 2:345 http://www.springerplus.com/content/2/1/345 a SpringerOpen Journal RESEARCH Open Access A comparative survey of genetic diversity among a set of Caricaceae accessions using microsatellite markers Samik Sengupta2, Basabdatta Das1, Manoj Prasad3, Pinaki Acharyya2 and Tapas Kumar Ghose1* Abstract A preliminary survey of genetic diversity among 34 commercially popular Carica papaya cultivars from India and abroad, 6 accessions of Vasconcellea species and 1 accession of Jacaratia spinosa, was done using 20 simple sequence repeat (SSR) markers. The SSR profiles were used to find out total number of alleles, null and rare alleles, Polymorphism Information Content (PIC) values and to calculate similarity matrix using Jaccard’s coefficient. The subsequent dendrogram was made by unweighted pair-group method of arithmetic average (UPGMA) and neighbor-joining method. Based on these parameters a comparison was made between the Indian papaya cultivars and the rest of the accessions. All the markers showed polymorphism and a total of 140 alleles were identified. The average number of alleles was 7 alleles/locus. Categorically the Vasconcellea and Jacaratia species had 54 alleles, the 7 non-Indian Carica papaya accessions had 70 and the 27 Indian accessions had 102 alleles. The average PIC value was 0.735 per marker. A total of 37 rare alleles were identified. Jacaratia spinosa had 17 rare alleles. Nineteen null alleles were detected among the Carica papaya accessions. A Carica papaya accession from South Africa, Hortus Gold had 5 null alleles. The genetic similarity among the accessions ranged from 7% to 67%. In the dendrogram, the Vasconcellea and Jacaratia spinosa accessions separated as a distinct cluster from the rest of the Carica papaya accessions. -
Variation in the Abundance of Bees Across Distinct Montane Meadows
Pursuit - The Journal of Undergraduate Research at The University of Tennessee Volume 2 Issue 1 Spring 2011 Article 12 March 2011 Variation in the Abundance of Bees Across Distinct Montane Meadows Jessica N. Welch University of Tennessee - Knoxville, [email protected] Follow this and additional works at: https://trace.tennessee.edu/pursuit Recommended Citation Welch, Jessica N. (2011) "Variation in the Abundance of Bees Across Distinct Montane Meadows," Pursuit - The Journal of Undergraduate Research at The University of Tennessee: Vol. 2 : Iss. 1 , Article 12. Available at: https://trace.tennessee.edu/pursuit/vol2/iss1/12 This Article is brought to you for free and open access by Volunteer, Open Access, Library Journals (VOL Journals), published in partnership with The University of Tennessee (UT) University Libraries. This article has been accepted for inclusion in Pursuit - The Journal of Undergraduate Research at The University of Tennessee by an authorized editor. For more information, please visit https://trace.tennessee.edu/pursuit. Pursuit: The Journal of Undergraduate Research at the University of Tennessee Copyright © The University of Tennessee Variation in the Abundance of Bees Across Distinct Montane Meadows JESSICA NICOLE WELCH Advisor: Nathan Sanders Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville Across different landscapes, plant abundance and richness change. Bee dis- tributions may vary spatially or temporally in accordance with differences in floral diversity. I used a habitat-based approach to investigate the hypothesis that the abundance of bees in assemblages varied among three distinct meadow types: dry meadow, wet meadow-Veratrum, and wet meadow-Salix. Patterns of bee abundance were sampled using bee bowls and netting around Gothic, Colorado. -
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Cintia Luz.Pdf
Cíntia Luíza da Silva Luz Filogenia e sistemática de Schinus L. (Anacardiaceae), com revisão de um clado endêmico das matas nebulares andinas Phylogeny and systematics of Schinus L. (Anacardiaceae), with revision of a clade endemic to the Andean cloud forests Tese apresentada ao Instituto de Biociências da Universidade de São Paulo, para obtenção de Título de Doutor em Ciências, na Área de Botânica. Orientador: Dr. José Rubens Pirani São Paulo 2017 Luz, Cíntia Luíza da Silva Filogenia e sistemática de Schinus L. (Anacardiaceae), com revisão de um clado endêmico das matas nebulares andinas Número de páginas: 176 Tese (Doutorado) - Instituto de Biociências da Universidade de São Paulo. Departamento de Botânica. 1. Anacardiaceae 2. Schinus 3. Filogenia 4. Taxonomia vegetal I. Universidade de São Paulo. Instituto de Biociências. Departamento de Botânica Comissão julgadora: ______________________________ ______________________________ Prof(a). Dr.(a) Prof(a). Dr.(a) ______________________________ ______________________________ Prof(a). Dr.(a) Prof(a). Dr.(a) _____________________________________ Prof. Dr. José Rubens Pirani Orientador Ao Luciano Luz, pelo entusiasmo botânico, companheirismo e dedicação aos Schinus Esta é a estória. Ia um menino, com os tios, passar dias no lugar onde se construía a grande cidade. Era uma viagem inventada no feliz; para ele, produzia-se em caso de sonho. Saíam ainda com o escuro, o ar fino de cheiros desconhecidos. A mãe e o pai vinham trazê-lo ao aeroporto. A tia e o tio tomavam conta dele, justínhamente. Sorria-se, saudava-se, todos se ouviam e falavam. O avião era da companhia, especial, de quatro lugares. Respondiam-lhe a todas as perguntas, até o piloto conversou com ele. -
Bignoniaceae)
Systematic Botany (2007), 32(3): pp. 660–670 # Copyright 2007 by the American Society of Plant Taxonomists Taxonomic Revisions in the Polyphyletic Genus Tabebuia s. l. (Bignoniaceae) SUSAN O. GROSE1 and R. G. OLMSTEAD Department of Biology, University of Washington, Box 355325, Seattle, Washington 98195 U.S.A. 1Author for correspondence ([email protected]) Communicating Editor: James F. Smith ABSTRACT. Recent molecular studies have shown Tabebuia to be polyphyletic, thus necessitating taxonomic revision. These revisions are made here by resurrecting two genera to contain segregate clades of Tabebuia. Roseodendron Miranda consists of the two species with spathaceous calices of similar texture to the corolla. Handroanthus Mattos comprises the principally yellow flowered species with an indumentum of hairs covering the leaves and calyx. The species of Handroanthus are also characterized by having extremely dense wood containing copious quantities of lapachol. Tabebuia is restricted to those species with white to red or rarely yellow flowers and having an indumentum of stalked or sessile lepidote scales. The following new combinations are published: Handroanthus arianeae (A. H. Gentry) S. Grose, H. billbergii (Bur. & K. Schum). S. Grose subsp. billbergii, H. billbergii subsp. ampla (A. H. Gentry) S. Grose, H. botelhensis (A. H. Gentry) S. Grose, H. bureavii (Sandwith) S. Grose, H. catarinensis (A. H. Gentry) S. Grose, H. chrysanthus (Jacq.) S. Grose subsp. chrysanthus, H. chrysanthus subsp. meridionalis (A. H. Gentry) S. Grose, H. chrysanthus subsp. pluvicolus (A. H. Gentry) S. Grose, H. coralibe (Standl.) S. Grose, H. cristatus (A. H. Gentry) S. Grose, H. guayacan (Seemann) S. Grose, H. incanus (A. H. -
Plants and Gall Hosts of the Tirimbina Biological Reserve
DOI 10.15517/RBT.V67I2SUPL.37233 Artículo Plants and gall hosts of the Tirimbina Biological Reserve, Sarapiqui, Costa Rica: Combining field sampling with herbarium records Plantas y hospederos de agallas de la Reserva Biológica Tirimbina, Sarapiquí, Costa Rica: combinando muestras del campo con registros del herbario Juan Manuel Ley-López1 José González2 Paul E. Hanson3* 1 Departamento Académico, Reserva Biológica Tirimbina. Sarapiquí, Heredia, Costa Rica; [email protected] 2 Independent consultant, Costa Rica; [email protected] 3 Escuela de Biología, Universidad de Costa Rica; San Pedro, 11501-2060 San José, Costa Rica; [email protected] * Correspondence Received 03-X-2018 Corrected 10-I-2018 Accepted 24-I-2019 Abstract There has been an increasing number of inventories of gall-inducing arthropods in the Neotropics. Nonetheless, very few inventories have been carried out in areas where the flora is well documented, and records of galls from herbaria and sites outside the study area have seldom been utilized. In this study we provide a checklist of the native vascular plants of a 345 ha forest reserve in the Caribbean lowlands of Costa Rica and document which of these plants were found to harbor galls. The gall surveys were carried out between November 2013 and December 2016. We also cross-checked our plant list with the previous gall records from elsewhere in the country and searched for galls on herbarium specimens of dicots reported from the reserve. In total, we recorded 143 families and 1174 plant species, of which 401 were hosts of galls. Plant hosts of galls were found in the following non-mutually exclusive categories: 209 in our field sampling, 257 from previous records, and 158 in herbarium specimens. -
SOUTH AMERICAN NATURAL ECOSYSTEMS, STATUS of Philip M
SOUTH AMERICAN NATURAL ECOSYSTEMS, STATUS OF Philip M. Fearnside National Institute for Research in the Amazon (INPA) I. Original Extent of Terrestrial Ecosystems ilar general structure, climatic regimes, major eco- II. Present Extent of Terrestrial Ecosystems logical processes, ͱ diversity, and flora and fauna III. Human Use of Converted Areas with similar guild structures and life histories. IV. Human Use of Remaining Natural Habitats V. Threats to Remaining Natural Habitats VI. Status of Protected Areas VII. Priorities for Conservation THE TERM ECOREGION, as used in this article, refers to ‘‘natural’’ ecological systems, or terrestrial and aquatic areas as they were when Europeans first arrived in the GLOSSARY New World. The original extent of natural ecoregions is presented, grouped by bioregion, major habitat type, bioregion One of six biogeographic divisions of South and major ecosystem type. The definitions of these America consisting of contiguous ecoregions. Biore- terms, given in the Glossary, are taken from Dinerstein gions are delimited to better address the biogeo- et al. (1995); the rating codes are given in the footnotes graphic distinctiveness of ecoregions. to the table. Indications of the extent of remaining ecoregion A geographically distinct assemblage of nat- natural ecosystems, the threats to their continued exis- ural communities that share a large majority of their tence, and the status of protected areas are discussed, species and ecological dynamics, share similar envi- together with priorities for conservation. ronmental conditions, and interact ecologically in ways that are critical for their long-term persistence. ecosystem A set of interacting living and nonliving I. ORIGINAL EXTENT OF components in a defined geographic space. -
Marker-Assisted Breeding for Papaya Ringspot Virus Resistance in Carica Papaya L
Marker-Assisted Breeding for Papaya Ringspot Virus Resistance in Carica papaya L. Author O'Brien, Christopher Published 2010 Thesis Type Thesis (Masters) School Griffith School of Environment DOI https://doi.org/10.25904/1912/3639 Copyright Statement The author owns the copyright in this thesis, unless stated otherwise. Downloaded from http://hdl.handle.net/10072/365618 Griffith Research Online https://research-repository.griffith.edu.au Marker-Assisted Breeding for Papaya Ringspot Virus Resistance in Carica papaya L. Christopher O'Brien BAppliedSc (Environmental and Production Horticulture) University of Queensland Griffith School of Environment Science, Environment, Engineering and Technology Griffith University Submitted in fulfilment of the requirements of the degree of Master of Philosophy September 4, 2009 2 Table of Contents Page No. Abstract ……………………………………………………… 11 Statement of Originality ………………………………………........ 13 Acknowledgements …………………………………………. 15 Chapter 1 Literature review ………………………………....... 17 1.1 Overview of Carica papaya L. (papaya)………………… 19 1.1.1 Taxonomy ………………………………………………… . 19 1.1.2 Origin ………………………………………………….. 19 1.1.3 Botany …………………………………………………… 20 1.1.4 Importance …………………………………………………... 25 1.2 Overview of Vasconcellea species ……………………… 28 1.2.1 Taxonomy …………………………………………………… 28 1.2.2 Origin ……………………………………………………… 28 1.2.3 Botany ……………………………………………………… 31 1.2.4 Importance …………………………………………………… 31 1.2.5 Brief synopsis of Vasconcellea species …………………….. 33 1.3 Papaya ringspot virus (PRSV-P)…………………………. 42 1.3.1 Overview ………………………………………………………. 42 1.3.2 Distribution …………………………………………………… 43 1.3.3 Symptoms and effects ……………………………………….. .. 44 1.3.4 Transmission …………………………………………………. 45 1.3.5 Control ………………………………………………………. .. 46 1.4 Breeding ………………………………………………………. 47 1.4.1 Disease resistance …………………………………………….. 47 1.4.2 Biotechnology………………………………………………….. 50 1.4.3 Intergeneric hybridisation…………………………………….. 51 1.4.4 Genetic transformation………………………………………… 54 1.4.5 DNA analysis ………………………………………………..... -
Assessment of Species Listing Proposals for CITES Cop18
VKM Report 2019: 11 Assessment of species listing proposals for CITES CoP18 Scientific opinion of the Norwegian Scientific Committee for Food and Environment Utkast_dato Scientific opinion of the Norwegian Scientific Committee for Food and Environment (VKM) 15.03.2019 ISBN: 978-82-8259-327-4 ISSN: 2535-4019 Norwegian Scientific Committee for Food and Environment (VKM) Po 4404 Nydalen N – 0403 Oslo Norway Phone: +47 21 62 28 00 Email: [email protected] vkm.no vkm.no/english Cover photo: Public domain Suggested citation: VKM, Eli. K Rueness, Maria G. Asmyhr, Hugo de Boer, Katrine Eldegard, Anders Endrestøl, Claudia Junge, Paolo Momigliano, Inger E. Måren, Martin Whiting (2019) Assessment of Species listing proposals for CITES CoP18. Opinion of the Norwegian Scientific Committee for Food and Environment, ISBN:978-82-8259-327-4, Norwegian Scientific Committee for Food and Environment (VKM), Oslo, Norway. VKM Report 2019: 11 Utkast_dato Assessment of species listing proposals for CITES CoP18 Note that this report was finalised and submitted to the Norwegian Environment Agency on March 15, 2019. Any new data or information published after this date has not been included in the species assessments. Authors of the opinion VKM has appointed a project group consisting of four members of the VKM Panel on Alien Organisms and Trade in Endangered Species (CITES), five external experts, and one project leader from the VKM secretariat to answer the request from the Norwegian Environment Agengy. Members of the project group that contributed to the drafting of the opinion (in alphabetical order after chair of the project group): Eli K. -
Final Report
Final Report New Genetic Targets to Improve Quality in Papaya Project leader: Rebecca Ford Delivery partner: Griffith University Project code: PP15000 Hort Innovation – Final Report Project: New Genetic Targets to Improve Quality in Papaya – PP15000 Disclaimer: Horticulture Innovation Australia Limited (Hort Innovation) makes no representations and expressly disclaims all warranties (to the extent permitted by law) about the accuracy, completeness, or currency of information in this Final Report. Users of this Final Report should take independent action to confirm any information in this Final Report before relying on that information in any way. Reliance on any information provided by Hort Innovation is entirely at your own risk. Hort Innovation is not responsible for, and will not be liable for, any loss, damage, claim, expense, cost (including legal costs) or other liability arising in any way (including from Hort Innovation or any other person’s negligence or otherwise) from your use or non‐use of the Final Report or from reliance on information contained in the Final Report or that Hort Innovation provides to you by any other means. Funding statement: This project has been funded by Hort Innovation, using the papaya research and development levy, co‐investment from Griffith University and contributions from the Australian Government. Hort Innovation is the grower‐owned, not‐for‐profit research and development corporation for Australian horticulture. Publishing details: ISBN 978 0 7341 4403 4 Published and distributed by: Hort Innovation Level 8 1 Chifley Square Sydney NSW 2000 Telephone: (02) 8295 2300 www.horticulture.com.au © Copyright 2018 Horticulture Innovation Australia Limited Contents Summary ......................................................................................................................................