IV. on the Proteaceć of Jussieu. by Mr. Robert Brown, Lib. LS
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Macadamia Integrifolia HAES 741)
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.25.114009; this version posted May 27, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Chromosome-scale assembly and annotation of the macadamia genome (Macadamia integrifolia HAES 741) Catherine J. Nock1†*, Abdul Baten1,2†, Ramil Mauleon1, Kirsty S. Langdon1, Bruce Topp3, Craig Hardner3, Agnelo Furtado3, Robert J. Henry3 and Graham J. King1 1Southern Cross Plant Science, Southern Cross University, Lismore NSW 2480, Australia 2AgResearch NZ, Grasslands Research Centre, Palmerston North 4442, New Zealand 3Queensland Alliance for Agriculture and Food Innovation, University of Queensland, St Lucia QLD 4069, Australia †These authors contributed equally to this work *Corresponding author, [email protected] ORCID 0000-0001-5609-4681 Abstract Macadamia integrifolia is a representative of the large basal eudicot family Proteaceae and the main progenitor species of the Australian native nut crop macadamia. Since its commercialisation in Hawaii fewer than 100 years ago, global production has expanded rapidly. However, genomic resources are limited in comparison to other horticultural crops. The first draft assembly of M. integrifolia had good coverage of the functional gene space but its high fragmentation has restricted its use in comparative genomics and association studies. Here we have generated an improved assembly of cultivar HAES 741 (4,094 scaffolds, 745 Mb, N50 413 kb) using a combination of Illumina paired and PacBio long read sequences. -
Pathogens Associated with Diseases. of Protea, Leucospermum and Leucadendron Spp
PATHOGENS ASSOCIATED WITH DISEASES. OF PROTEA, LEUCOSPERMUM AND LEUCADENDRON SPP. Lizeth Swart Thesis presented in partial fulfillment of the requirements for the degree of Master of Science in Agriculture at the University of Stellenbosch Supervisor: Prof. P. W. Crous Decem ber 1999 Stellenbosch University https://scholar.sun.ac.za DECLARATION 1, the undersigned, hereby declare that the work contained in this thesis is my own original work and has not previously in its entirety or in part been submitted at any university for a degree. SIGNATURE: DATE: Stellenbosch University https://scholar.sun.ac.za PATHOGENS ASSOCIATED WITH DISEASES OF PROTEA, LEUCOSPERMUM ANDLEUCADENDRONSPP. SUMMARY The manuscript consists of six chapters that represent research on different diseases and records of new diseases of the Proteaceae world-wide. The fungal descriptions presented in this thesis are not effectively published, and will thus be formally published elsewhere in scientific journals. Chapter one is a review that gives a detailed description of the major fungal pathogens of the genera Protea, Leucospermum and Leucadendron, as reported up to 1996. The pathogens are grouped according to the diseases they cause on roots, leaves, stems and flowers, as well as the canker causing fungi. In chapter two, several new fungi occurring on leaves of Pro tea, Leucospermum, Telopea and Brabejum collected from South Africa, Australia or New Zealand are described. The following fungi are described: Cladophialophora proteae, Coniolhyrium nitidae, Coniothyrium proteae, Coniolhyrium leucospermi,Harknessia leucospermi, Septoria prolearum and Mycosphaerella telopeae spp. nov. Furthermore, two Phylloslicla spp., telopeae and owaniana are also redecribed. The taxonomy of the Eisinoe spp. -
Rates of Molecular Evolution and Diversification in Plants: Chloroplast
Duchene and Bromham BMC Evolutionary Biology 2013, 13:65 http://www.biomedcentral.com/1471-2148/13/65 RESEARCH ARTICLE Open Access Rates of molecular evolution and diversification in plants: chloroplast substitution rates correlate with species-richness in the Proteaceae David Duchene* and Lindell Bromham Abstract Background: Many factors have been identified as correlates of the rate of molecular evolution, such as body size and generation length. Analysis of many molecular phylogenies has also revealed correlations between substitution rates and clade size, suggesting a link between rates of molecular evolution and the process of diversification. However, it is not known whether this relationship applies to all lineages and all sequences. Here, in order to investigate how widespread this phenomenon is, we investigate patterns of substitution in chloroplast genomes of the diverse angiosperm family Proteaceae. We used DNA sequences from six chloroplast genes (6278bp alignment with 62 taxa) to test for a correlation between diversification and the rate of substitutions. Results: Using phylogenetically-independent sister pairs, we show that species-rich lineages of Proteaceae tend to have significantly higher chloroplast substitution rates, for both synonymous and non-synonymous substitutions. Conclusions: We show that the rate of molecular evolution in chloroplast genomes is correlated with net diversification rates in this large plant family. We discuss the possible causes of this relationship, including molecular evolution driving diversification, speciation increasing the rate of substitutions, or a third factor causing an indirect link between molecular and diversification rates. The link between the synonymous substitution rate and clade size is consistent with a role for the mutation rate of chloroplasts driving the speed of reproductive isolation. -
Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
Blushing Bride FAMILY NAME: Proteaceae Species and Cultivars Of
Plant Profile Botanical Name: Serruria florida Common Name: Blushing Bride FAMILY NAME: Proteaceae Species and cultivars of special interest: Serruria florida hybrids and cvv. such as ‘Sugar ’n’ Spice’, ‘Pretty in Pink’, ‘Super Blush’, ‘Carmen’ Origin: South Africa Availability: May to October Foliage Characteristics: Stem length is 30- 60 cm. They have papery white bracts or floral leaves surrounding the flower. The sugar and spice variety has pink on the white bracts too. 5- 10 stems per bunch. Floral Characteristics: Blushing bride have feathery tufts of white to pinkish flowers. Sugar and spice variety has pink flowers. Special features and characteristics of special interest: It is thought that blushing bride got its name because of its traditional use in Africa as bridal bouquets. The species was near extinction due to being over exploited until conservation measures in the 1960s and 70s kicked in. Botanical name given in honour of James Serrurier, an 18th century professor of Botany at the Unisversity of Utrecht. Maintenance, Cultural requirements and Post Harvest Treatments: Blushing Bride is grown on large bushes in plantations across Australia. They are also grown in South Africa, Israel and the US. Handle blushing brides gently as flowers dry out quickly. They can have floral preservative. It is unknown whether it is Ethylene sensitive. When stored in cool storage keep at at 2- 4 degrees. Strip leaves from water level down. Pest and Diseases: The pedicels are vulnerable to Botrytis infection, which causes them to collapse. They do not suffer from leaf blackening like protea species do but the leaves may turn black if submerged in buckets of solution or if held for too long. -
THE PROTEA ATLAS of Southern Africa
THE PROTEA ATLAS of southern Africa Anthony G Rebelo (Ed.) South African National Biodiversity Institute, Kirstenbosch THE PROTEA ATLAS of southern Africa Anthony G Rebelo (Ed.) South African National Biodiversity Institute, Pretoria (Title Page) Standard SANBI copyright page (Copyright page) Foreword By whom? CONTENTS ACKNOWLEDGEMENTS .......................................................................................................................... x Sponsors ........................................................................................................................................................ x Organisation .................................................................................................................................................. x Atlassers ........................................................................................................................................................ x 1. INTRODUCTION..................................................................................................................................... x Background ....................................................................................................................................... x Scope (objectives) ............................................................................................................................. x Species............................................................................................................................................... x Geographical -
Anatomical Adaptations in the Leaves of Selected Fynbos Species
S.Afr.J.Bot., 1994, 60(2): 99 - 107 99 Anatomical adaptations in the leaves of selected fynbos species Al ison M. van der Merwe (nee Summerfield),· J.J.A. van der Walt and Elizabeth M. Marais Department of Botany, University of Stellenbosch, Stellenbosch, 7600 Republic of South Africa Received 23 August 1993; revised 6 December 1993 Fynbos plants experience very harsh conditions during the hot and dry summer months and their leaves are adapt ed to reduce the loss of water due to transpiration. The leaves of 46 selected fynbos species of 24 families were examined to determine which anatomical adaptations contribute to the reduced rate of transpiration and subse quent reduced water loss. Without exception, all species examined show leaf adaptations typical of xerophytic species. Four typical leaf types are recognized and proposed as models of leaf adaptation: 1. Myrsine type - dorsi ventral or isobilateral leaves; more palisade parenchyma present than spongy parenchyma; tissues contain large amounts of phenolic substances. 2. Meta/asia type - small dorsiventral leaves with involute margins and a single groove in the adaxial surface; mesophyll is usually inverted. 3. Retzia type - dorsi ventral or isobilateral leaves with revolute margins and one or two grooves in the abaxial surface; spongy parenchyma is the main component of the mesophyll. 4. Spatalla type - small centric or near-centric leaves; little or no spongy parenchy ma tissue. Fynbos plante ondervind uiterste toestande tydens die warm, droa somermaande, en hulle blare is aangepas om waterverlies tydens transpirasie te beperk. Blare van geselekteerde fynbos-spesies uit 24 families is ondersoek am die bydrae van die verskillende anatomiese aanpassings tot verminderde transpirasietempo en gevolglike water verlies, vas te stel. -
Nectar Distribution and Nectarivorous Bird Foraging Behaviour at Different Spatial Scales
Nectar distribution and nectarivorous bird foraging behaviour at different spatial scales by Anina Coetzee Dissertation presented for the Degree of Doctor of Philosophy in the Faculty of Science, at Stellenbosch University Supervisor: Prof. Anton Pauw Co-supervisor: Dr. Phoebe Barnard March 2016 Stellenbosch University https://scholar.sun.ac.za Declaration By submitting this thesis electronically, I declare that the entirety of the work contained therein is my own original work, that I am the authorship owner thereof (unless to the extent explicitly otherwise stated) and that I have not previously in its entirety or in part submitted it for obtaining any qualification. March 2016 Copyright © 2016 Stellenbosch University of Stellenbosch All rights reserved i Stellenbosch University https://scholar.sun.ac.za Abstract While foraging strategies of animals may be shaped by the distribution of their food resources, these strategies in turn also affect the ecology and evolution of their resources. In this regard, African systems, of all the different bird-pollination systems worldwide, have been least studied. I investigated the relationships between these aspects at population, community and landscape levels in the bird-pollination systems of the Cape Floristic Region. This biodiversity hotspot in the southwest of South Africa contains an unusually high number of bird-pollinated plant species relative to the number of pollinating bird species. Chapter 2 describes how I experimentally tested which nectar resource traits affect sunbird foraging behaviour at the small scale within populations. Sunbirds’ behaviour was largely determined by visual signals and distances between nectar resources. The birds showed flower colour preferences, but no flower constancy (selective foraging only on one flower type). -
CREW Newsletter
CUSTODIANS OF RARE AND ENDANGERED WILDFLOWERS Cape Holly Ilex mitis hard work entering this information. Margaret has come into the office every day for the last 6 months and Welcome to the first CREW newsletter! At our workshop in diligently entered all Cape Nature’s data on rares collected 2005 we were requested to start a newsletter-it has taken in the 1980’s and 1990’s. Liz Metcalf has also volunteered quite sometime to get the first newsletter going since we in the office and has been fantastic at helping mounting made the mistake of trying to get you all to write in the and accessioning specimens that we receive from all our middle of spring when you were far more interested in being groups. Thank you so much Liz and Margaret. out in the field. Now that spring is well over and the plants are dropping their seeds or starting to hide underground, In the New Year we will be sending out schedules of and we are preparing for the end of the year, we thought general volunteer fieldtrips and ID courses as well as T- we would see what you think of our idea of a newsletter. shirt and cap designs bearing our new logo-below are the Each group has written something for us, and Caitlin has options for you to vote on. Please don’t forget to keep th th stylishly pulled it all together. As this is our first edition we your diary free for our workshop on the 18 & 19 March. ask you please to give us some feedback. -
Serruria Villosa | Plantz Africa About:Reader?Url=
Serruria villosa | Plantz Africa about:reader?url=http://pza.sanbi.org/serruria-villosa pza.sanbi.org Serruria villosa | Plantz Africa Introduction Serruria villosa is a charming sweetly scented shrublet suited to the wild fynbos garden. Description Description Serruria villosa is an erect shrublet growing 0.3-0.5 m tall and spreading to 0.3 m. It has a neat, multi- stemmed habit, and forms a dense little bush. Leaves are needle-like with very fine hairs and curve upwards. They are 20-40 mm long and have hard black tips. Flowering occurs from late autumn to winter, April to July. Single golden yellow flower heads are produced on the tips of branches. Each yellow flower is topped with a fluffy white perianth. Flower heads measure 20-25 mm across and consist of up to 25 individual flowers. 1 of 5 2016/12/15 01:48 PM Serruria villosa | Plantz Africa about:reader?url=http://pza.sanbi.org/serruria-villosa Hairy brown seeds are produced two months after flowering. Conservation Status Status Serruria villosa is listed as Rare. It has a small distribution range but is protected, as it grows within Table Mountain National Park. Distribution and habitat Distribution description The golden spiderhead is endemic to the Cape Peninsula, meaning it occurs nowhere else. It can be found south of Constantia along mountain flats and slopes at altitudes of between 0-350 m. Soils are sandy and poor in nutrients being derived from Table Mountain Sandstone. This spiderhead is often found growing along rocky slopes in large spread out colonies. -
Fossil Fruit of the Macadamieae (Proteaceae) in the Tertiary of Eastern Australia: Eureka Gen
Memoirs of the Queensland Museum | Nature 55(1) © The State of Queensland (Queensland Museum) 2010 PO Box 3300, South Brisbane 4101, Australia Phone 06 7 3840 7555 Fax 06 7 3846 1226 Email [email protected] Website www.qm.qld.gov.au National Library of Australia card number ISSN 0079-8835 NOTE Papers published in this volume and in all previous volumes of the Memoirs of the Queensland Museum may be reproduced for scientific research, individual study or other educational purposes. Properly acknowledged quotations may be made but queries regarding the republication of any papers should be addressed to the Editor in Chief. Copies of the journal can be purchased from the Queensland Museum Shop. A Guide to Authors is displayed at the Queensland Museum web site http://www.qm.qld.gov.au/About+Us/Publications/Memoirs+of+the+Queensland+Museum A Queensland Government Project Typeset at the Queensland Museum Fossil fruit of the Macadamieae (Proteaceae) in the Tertiary of eastern Australia: Eureka gen. nov. Mary E. DETTMANN H. Trevor CLIFFORD Queensland Museum, Geosciences, Hendra Facility, 122 Gerler Rd, Hendra, Qld 4011, Australia. Email: [email protected] Citation: Dettmann, M.E. & Clifford, H.T. 2010 03 15. Fossil fruit of the Macadamieae (Proteaceae) in the Tertiary of eastern Australia: Eureka gen. nov.. Memoirs of the Queensland Museum — Nature 55(1): 147-166. Brisbane. ISSN 0079-8835. Accepted: 13 October 2009. ABSTRACT Eureka gen. nov. is proposed to accommodate fossil fruits recovered from several mid- Tertiary (early Oligocene-Miocene) sites in eastern Australia. The type (E. -
The Distribution of Free Amino Acids in Diastella Salisb., Leucospermum R.BR. and Some Other Members of the Proteaceae
THE DISTRIBUTION OF FR~E AMINO ACIDS IN DIASTELLA SALISB. , LEUCOSPERHUH R. BR. AND SOME OTHER MEMBERS OF THE PROTEACEAE by Leslie Ward Powrie Thesis sub•itted in fulfil1ent of the require1ents of the degree UniversityMagister of Scienteae Cape Town at the University of Cape Town. Cape Town May 1986 Pro1oter : Prof. J. N. Eloff --University of Cape Town has been given right to reproduce this thesis in whole ~ or in part. Copyright Is held by the author. ·.. ~· The copyright of this thesis vests in the author. No quotation from it or information derived from it is to be published without full acknowledgement of the source. The thesis is to be used for private study or non- commercial research purposes only. Published by the University of Cape Town (UCT) in terms of the non-exclusive license granted to UCT by the author. University of Cape Town THE DISTRieUTION OF FREE AMINO ACIDS IN DIASTELLA SALISB., LEUCOSPERNVW R.BR. AND SOME OTHER MEMBERS OF THE PROTEACEAE " It is untenable ••• to view secondary plant 1etabolites as plant 'garbage cans' designed for 'containerizing' nonfunctional 1olecules." Rosenthal (1982) CONTENTS 1. INTRODUCTIOII .•.....•...••...............•...•..•....•••.•....•••.••....•..•••..••.••••.••••.•••••...•••••..•• 1 1.1 BackgrOII'MI I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I • I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I t I I I I I I I I I I I I I 1 1.