Lithistid’ Tetractinellid
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New Zealand Oceanographic Institute Memoir 100
ISSN 0083-7903, 100 (Print) ISSN 2538-1016; 100 (Online) , , II COVER PHOTO. Dictyodendrilla cf. cavernosa (Lendenfeld, 1883) (type species of Dictyodendri/la Bergquist, 1980) (see page 24), from NZOI Stn I827, near Rikoriko Cave entrance, Poor Knights Islands Marine Reserve. Photo: Ken Grange, NZOI. This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ NATIONAL INSTITUTE OF WATER AND ATMOSPHERIC RESEARCH The Marine Fauna of New Zealand: Index to the Fauna 2. Porifera by ELLIOT W. DAWSON N .Z. Oceanographic Institute, Wellington New Zealand Oceanographic Institute Memoir 100 1993 • This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ Cataloguing in publication DAWSON, E.W. The marine fauna of New Zealand: Index to the Fauna 2. Porifera / by Elliot W. Dawson - Wellington: New Zealand Oceanographic Institute, 1993. (New Zealand Oceanographic Institute memoir, ISSN 0083-7903, 100) ISBN 0-478-08310-6 I. Title II. Series UDC Series Editor Dennis P. Gordon Typeset by Rose-Marie C. Thompson NIWA Oceanographic (NZOI) National Institute of Water and Atmospheric Research Received for publication: 17 July 1991 © NIWA Copyright 1993 2 This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ CONTENTS Page ABSTRACT 5 INTRODUCTION 5 SCOPE AND ARRANGEMENT 7 SYSTEMATIC LIST 8 Class DEMOSPONGIAE 8 Subclass Homosclcromorpha .............................................................................................. -
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
Appendix: Some Important Early Collections of West Indian Type Specimens, with Historical Notes
Appendix: Some important early collections of West Indian type specimens, with historical notes Duchassaing & Michelotti, 1864 between 1841 and 1864, we gain additional information concerning the sponge memoir, starting with the letter dated 8 May 1855. Jacob Gysbert Samuel van Breda A biography of Placide Duchassaing de Fonbressin was (1788-1867) was professor of botany in Franeker (Hol published by his friend Sagot (1873). Although an aristo land), of botany and zoology in Gent (Belgium), and crat by birth, as we learn from Michelotti's last extant then of zoology and geology in Leyden. Later he went to letter to van Breda, Duchassaing did not add de Fon Haarlem, where he was secretary of the Hollandsche bressin to his name until 1864. Duchassaing was born Maatschappij der Wetenschappen, curator of its cabinet around 1819 on Guadeloupe, in a French-Creole family of natural history, and director of Teyler's Museum of of planters. He was sent to school in Paris, first to the minerals, fossils and physical instruments. Van Breda Lycee Louis-le-Grand, then to University. He finished traveled extensively in Europe collecting fossils, especial his studies in 1844 with a doctorate in medicine and two ly in Italy. Michelotti exchanged collections of fossils additional theses in geology and zoology. He then settled with him over a long period of time, and was received as on Guadeloupe as physician. Because of social unrest foreign member of the Hollandsche Maatschappij der after the freeing of native labor, he left Guadeloupe W etenschappen in 1842. The two chief papers of Miche around 1848, and visited several islands of the Antilles lotti on fossils were published by the Hollandsche Maat (notably Nevis, Sint Eustatius, St. -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
And Their Pa Laeoe Co Logical Significance
LATE CRETACEOUS SILICEOUS SPONGES FROM THE MIDDLE VISTULA RIVER VALLEY (CENTRAL POLAND) AND THEIR PA LAEOE CO LOGICAL SIGNIFICANCE Ewa ŚWIERCZEWSKA-GŁADYSZ Geological Department o f the Łódź University, Narutowicza 88, 90-139 Łódź, Poland; e-mail: [email protected] Świerczewska-Gładysz, E., 2006. Late Cretaceous siliceous sponges from the Middle Vistula River Valley (Central Poland) and their palaeoecological significance. Annales Societatis Geologorum Poloniae, 76: 227-296. Abstract: Siliceous sponges are extremely abundant in the Upper Campanian-Maastrichtian opokas and marls of the Middle Vis-ula River VaUey, situated in the western edge of the Lublin Basin, part of the Cre-aceous German-Polish Basin. This is also the only one area in Poland where strata bearing the Late Maastrichtian sponges are exposed. The presented paper is a taxonomic revision of sponges coUected from this region. Based both on existing and newly collected material comprising ca. 1750 specimens, 51 species have been described, including 18 belonging to the Hexactinosida, 15 - to the Lychniscosida and 18 - to Demospongiae. Among them, 28 have not been so far described from Poland. One new genus Varioporospongia, assigned to the family Ventriculitidae Smith and two new species Varioporospongia dariae sp. n. and Aphrocallistes calciformis sp. n. have been described. Comparison of sponge fauna from the area of Podilia, Crimea, Chernihov, and Donbas regions, as well as literature data point to the occurrence of species common in the analysed area and to the basins of Eastern and Western Europe. This in turn indicates good connections between particular basins of the European epicontinental sea dumg the Campanian-Maastrichtian. -
Natural Products from the Lithistida: a Review of the Literature Since 2000
Mar. Drugs 2011, 9, 2643-2682; doi:10.3390/md9122643 OPEN ACCESS Marine Drugs ISSN 1660-3397 www.mdpi.com/journal/marinedrugs Review Natural Products from the Lithistida: A Review of the Literature since 2000 Priscilla L. Winder, Shirley A. Pomponi and Amy E. Wright * Harbor Branch Oceanographic Institution at Florida Atlantic University, Center for Marine Biomedical and Biotechnology Research, 5600 US 1 North, Fort Pierce, FL 34946, USA; E-Mails: [email protected] (P.L.W.); [email protected] (S.A.P.) * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-772-242-2459; Fax: +1-772-242-2332. Received: 27 September 2011; in revised form: 9 November 2011 / Accepted: 6 December 2011 / Published: 15 December 2011 Abstract: Lithistid sponges are known to produce a diverse array of compounds ranging from polyketides, cyclic and linear peptides, alkaloids, pigments, lipids, and sterols. A majority of these structurally complex compounds have very potent and interesting biological activities. It has been a decade since a thorough review has been published that summarizes the literature on the natural products reported from this amazing sponge order. This review provides an update on the current taxonomic classification of the Lithistida, describes structures and biological activities of 131 new natural products, and discusses highlights from the total syntheses of 16 compounds from marine sponges of the Order Lithistida providing a compilation of the literature since the last review published in 2002. Keywords: Lithistida; lithistid; Theonella; desmas; natural product 1. Introduction The Order Lithistida is a polyphyletic assemblage of sponges grouped together based on interlocking siliceous spicules called desmas that make up their skeleton [1,2]. -
Molecular Phylogenetics Suggests a New Classification and Uncovers Convergent Evolution of Lithistid Demosponges
RESEARCH ARTICLE Deceptive Desmas: Molecular Phylogenetics Suggests a New Classification and Uncovers Convergent Evolution of Lithistid Demosponges Astrid Schuster1,2, Dirk Erpenbeck1,3, Andrzej Pisera4, John Hooper5,6, Monika Bryce5,7, Jane Fromont7, Gert Wo¨ rheide1,2,3* 1. Department of Earth- & Environmental Sciences, Palaeontology and Geobiology, Ludwig-Maximilians- Universita¨tMu¨nchen, Richard-Wagner Str. 10, 80333 Munich, Germany, 2. SNSB – Bavarian State Collections OPEN ACCESS of Palaeontology and Geology, Richard-Wagner Str. 10, 80333 Munich, Germany, 3. GeoBio-CenterLMU, Ludwig-Maximilians-Universita¨t Mu¨nchen, Richard-Wagner Str. 10, 80333 Munich, Germany, 4. Institute of Citation: Schuster A, Erpenbeck D, Pisera A, Paleobiology, Polish Academy of Sciences, ul. Twarda 51/55, 00-818 Warszawa, Poland, 5. Queensland Hooper J, Bryce M, et al. (2015) Deceptive Museum, PO Box 3300, South Brisbane, QLD 4101, Australia, 6. Eskitis Institute for Drug Discovery, Griffith Desmas: Molecular Phylogenetics Suggests a New Classification and Uncovers Convergent Evolution University, Nathan, QLD 4111, Australia, 7. Department of Aquatic Zoology, Western Australian Museum, of Lithistid Demosponges. PLoS ONE 10(1): Locked Bag 49, Welshpool DC, Western Australia, 6986, Australia e116038. doi:10.1371/journal.pone.0116038 *[email protected] Editor: Mikhail V. Matz, University of Texas, United States of America Received: July 3, 2014 Accepted: November 30, 2014 Abstract Published: January 7, 2015 Reconciling the fossil record with molecular phylogenies to enhance the Copyright: ß 2015 Schuster et al. This is an understanding of animal evolution is a challenging task, especially for taxa with a open-access article distributed under the terms of the Creative Commons Attribution License, which mostly poor fossil record, such as sponges (Porifera). -
FAU Institutional Repository
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©1994 Elsevier B.V. This manuscript is an author version with the final publication available at http://www.sciencedirect.com/science/journal/03051978 and may be cited as: Kelly‐Borges, M., Robinson, E. V., Gunasekera, S. P., Gunasekera, M., Gulavita, N. K., & Pomponi, S. A. (1994). Species differentiation in the marine sponge genus Discodermia (Demospongiae, Lithistida): the utility of ethanol extract profiles as species‐specific chemotaxonomic markers. Biochemical Systematics and Ecology, 22(4), 353‐365. doi:10.1016/0305‐1978(94)90026‐4 Biochemical Systematics and Ecology. Vol.22, No.4, pp. 353-365, 1994 Copyright © 1994 Elsevier Science ltd Printed in Great Britain. All rights reserved 0305-1978/94 $7.00+0.00 0305-1978(94)EOOO3-X Species Differentiation in the Marine Sponge Genus Discodermia (Demospongiae: Lithistida): the Utility of Ethanol Extract Profiles as Species-Specific Chemotaxonomic Markers* MICHELLE KELLY-BORGES,t ELISE V. ROBINSON, SARATH P. GUNASEKERA, MALIKA GUNASEKERA, NANDA K. GULAVITA and SHIRLEY A. POMPONI:f Division of Biomedical Marine Research,Harbor Branch Oceanographic Institution, 5600 North U.S. 1. Fort Pierce. FL 34946. U.SA; tPresent address: Department of Zoology, The Natural History Museum. Cromwell Road. London SW7 5BD. U.K. Key Word Index-Theonellidae; Lithistida; Demospongiae; Porifera; Discoderrnia; chemotaxonomy; thin layer chromatography; 'H-NMR spectra; taxonomic relationships. Abstract-Many species of the marine sponge genus Discoderrnia (Lithistida. Theonellidae) are difficult to differentiate due to plasticity of their morphological features. Ethanol extracts of 26 specimens of central Atlantic Discoderrnia spp. -
Ereskovsky Et 2018 Bulgarie.Pd
Sponge community of the western Black Sea shallow water caves: diversity and spatial distribution Alexander Ereskovsky, Oleg Kovtun, Konstantin Pronin, Apostol Apostolov, Dirk Erpenbeck, Viatcheslav Ivanenko To cite this version: Alexander Ereskovsky, Oleg Kovtun, Konstantin Pronin, Apostol Apostolov, Dirk Erpenbeck, et al.. Sponge community of the western Black Sea shallow water caves: diversity and spatial distribution. PeerJ, PeerJ, 2018, 6, pp.e4596. 10.7717/peerj.4596. hal-01789010 HAL Id: hal-01789010 https://hal.archives-ouvertes.fr/hal-01789010 Submitted on 14 May 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Sponge community of the western Black Sea shallow water caves: diversity and spatial distribution Alexander Ereskovsky1,2, Oleg A. Kovtun3, Konstantin K. Pronin4, Apostol Apostolov5, Dirk Erpenbeck6 and Viatcheslav Ivanenko7 1 Institut Méditerranéen de Biodiversité et d'Ecologie Marine et Continentale (IMBE), Aix Marseille University, CNRS, IRD, Avignon Université, Marseille, France 2 Department of Embryology, Faculty of Biology, -
An Annotated Checklist of the Marine Macroinvertebrates of Alaska David T
NOAA Professional Paper NMFS 19 An annotated checklist of the marine macroinvertebrates of Alaska David T. Drumm • Katherine P. Maslenikov Robert Van Syoc • James W. Orr • Robert R. Lauth Duane E. Stevenson • Theodore W. Pietsch November 2016 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Kathryn D. Sullivan Scientific Editor* Administrator Richard Langton National Marine National Marine Fisheries Service Fisheries Service Northeast Fisheries Science Center Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Office of Science and Technology Economics and Social Analysis Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is pub- lished by the Scientific Publications Of- *Bruce Mundy (PIFSC) was Scientific Editor during the fice, National Marine Fisheries Service, scientific editing and preparation of this report. NOAA, 7600 Sand Point Way NE, Seattle, WA 98115. The Secretary of Commerce has The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original determined that the publication of research reports, taxonomic keys, species synopses, flora and fauna studies, and data- this series is necessary in the transac- intensive reports on investigations in fishery science, engineering, and economics. tion of the public business required by law of this Department. -
Widespread Occurrence and Genomic Context of Unusually Small
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Apr. 2007, p. 2144–2155 Vol. 73, No. 7 0099-2240/07/$08.00ϩ0 doi:10.1128/AEM.02260-06 Copyright © 2007, American Society for Microbiology. All Rights Reserved. Widespread Occurrence and Genomic Context of Unusually Small Polyketide Synthase Genes in Microbial Consortia Associated with Marine Spongesᰔ Lars Fieseler,1† Ute Hentschel,1 Lubomir Grozdanov,1 Andreas Schirmer,2 Gaiping Wen,3 Matthias Platzer,3 Sinisˇa Hrvatin,4‡ Daniel Butzke,4§ Katrin Zimmermann,4 and Jo¨rn Piel4* Research Center for Infectious Diseases, University of Wu¨rzburg, Ro¨ntgenring 11, 97070 Wu¨rzburg, Germany1; Kosan Biosciences, Inc., Hayward, California 945452; Genome Analysis, Leibniz Institute for Age Research-Fritz Lipmann Institute, Beutenbergstr. 11, Beutenberg Campus, 07745 Jena, Germany3; and Kekule´ Institute of Organic Chemistry and Biochemistry, University of Bonn, Gerhard-Domagk-Str. 1, 53121 Bonn, Germany4 Received 25 September 2006/Accepted 1 February 2007 Numerous marine sponges harbor enormous amounts of as-yet-uncultivated bacteria in their tissues. There is increasing evidence that these symbionts play an important role in the synthesis of protective metabolites, many of which are of great pharmacological interest. In this study, genes for the biosynthesis of polyketides, one of the most important classes of bioactive natural products, were systematically investigated in 20 demosponge species from different oceans. Unexpectedly, the sponge metagenomes were dominated by a ubiquitously present, evolutionarily distinct, and highly sponge-specific group of polyketide synthases (PKSs). Open reading frames resembling animal fatty acid genes were found on three corresponding DNA regions isolated from the metagenomes of Theonella swinhoei and Aplysina aerophoba.