Vaginal Microbiota and the Potential of Lactobacillus Derivatives in Maintaining Vaginal Health Wallace Jeng Yang Chee , Shu Yih Chew and Leslie Thian Lung Than*
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The Significance of Lactobacillus Crispatus and L. Vaginalis for Vaginal Health and the Negative Effect of Recent
Jespers et al. BMC Infectious Diseases (2015) 15:115 DOI 10.1186/s12879-015-0825-z RESEARCH ARTICLE Open Access The significance of Lactobacillus crispatus and L. vaginalis for vaginal health and the negative effect of recent sex: a cross-sectional descriptive study across groups of African women Vicky Jespers1*, Janneke van de Wijgert2, Piet Cools3, Rita Verhelst4, Hans Verstraelen5, Sinead Delany-Moretlwe6, Mary Mwaura7, Gilles F Ndayisaba8, Kishor Mandaliya7, Joris Menten9, Liselotte Hardy1,10, Tania Crucitti10 and for the Vaginal Biomarkers Study Group Abstract Background: Women in sub-Saharan Africa are vulnerable to acquiring HIV infection and reproductive tract infections. Bacterial vaginosis (BV), a disruption of the vaginal microbiota, has been shown to be strongly associated with HIV infection. Risk factors related to potentially protective or harmful microbiota species are not known. Methods: We present cross-sectional quantitative polymerase chain reaction data of the Lactobacillus genus, five Lactobacillus species, and three BV-related bacteria (Gardnerella vaginalis, Atopobium vaginae,andPrevotella bivia) together with Escherichia coli and Candida albicans in 426 African women across different groups at risk for HIV. We selected a reference group of adult HIV-negative women at average risk for HIV acquisition and compared species variations in subgroups of adolescents, HIV-negative pregnant women, women engaging in traditional vaginal practices, sex workers and a group of HIV-positive women on combination antiretroviral therapy. We explored the associations between presence and quantity of the bacteria with BV by Nugent score, in relation to several factors of known or theoretical importance. Results: The presence of species across Kenyan, South African and Rwandan women was remarkably similar and few differences were seen between the two groups of reference women in Kenya and South Africa. -
Lactobacillus Crispatus
WHAT 2nd Microbiome workshop WHEN 17 & 18 November 2016 WHERE Masur Auditorium at NIH Campus, Bethesda MD Modulating the Vaginal Microbiome to Prevent HIV Infection Laurel Lagenaur For more information: www.virology-education.com Conflict of Interest I work for Osel Inc., a microbiome company developing live biotherapeutic products to prevent diseases in women The Vaginal Microbiome and HIV Infection What’s normal /healthy/ optimal and what’s not? • Ravel Community Groups • Lactobacillus dominant vs. dysbiosis Why are Lactobacilli important for HIV prevention? • Dysbiosis = Inflammation = Increased risk of HIV acquisition • Efficacy of Pre-Exposure Prophylaxis decreased Modulation of the vaginal microbiome • LACTIN-V, live biotherapeutic-Lactobacillus crispatus • Ongoing clinical trials How we can use Lactobacilli and go a step further • Genetically modified Lactobacillus to prevent HIV acquisition HIV is Transmitted Across Mucosal Surfaces • HIV infection in women occurs in the mucosa of the vagina and cervix vagina cervix • Infection of underlying target cells All mucosal surfaces are continuously exposed to a Herrera and Shattock, community of microorganisms Curr Top Microbiol Immunol 2013 Vaginal Microbiome: Ravel Community Groups Vaginal microbiomes clustered into 5 groups: Group V L. jensenii Group II L. gasseri 4 were dominated by Group I L. crispatus Lactobacillus, Group III L. iners whereas the 5th had lower proportions of lactic acid bacteria and Group 4 Diversity higher proportions of Prevotella, strictly anaerobic Sneathia, -
The Histidine Decarboxylase Gene Cluster of Lactobacillus Parabuchneri Was Gained by Horizontal Gene Transfer and Is Mobile Within the Species
ORIGINAL RESEARCH published: 17 February 2017 doi: 10.3389/fmicb.2017.00218 The Histidine Decarboxylase Gene Cluster of Lactobacillus parabuchneri Was Gained by Horizontal Gene Transfer and Is Mobile within the Species Daniel Wüthrich 1, Hélène Berthoud 2, Daniel Wechsler 2, Elisabeth Eugster 2, Stefan Irmler 2 and Rémy Bruggmann 1* 1 Interfaculty Bioinformatics Unit and Swiss Institute of Bioinformatics, University of Bern, Bern, Switzerland, 2 Agroscope, Institute for Food Sciences, Bern, Switzerland Histamine in food can cause intolerance reactions in consumers. Lactobacillus parabuchneri (L. parabuchneri) is one of the major causes of elevated histamine levels in cheese. Despite its significant economic impact and negative influence on human health, no genomic study has been published so far. We sequenced and Edited by: analyzed 18 L. parabuchneri strains of which 12 were histamine positive and 6 were Danilo Ercolini, histamine negative. We determined the complete genome of the histamine positive strain University of Naples Federico II, Italy FAM21731 with PacBio as well as Illumina and the genomes of the remaining 17 strains Reviewed by: using the Illumina technology. We developed the synteny aware ortholog finding algorithm Patrick Lucas, University of Bordeaux 1, France SynOrf to compare the genomes and we show that the histidine decarboxylase (HDC) Daniel M. Linares, gene cluster is located in a genomic island. It is very likely that the HDC gene cluster Teagasc - The Irish Agriculture and Food Development Authority, Ireland was transferred from other lactobacilli, as it is highly conserved within several lactobacilli *Correspondence: species. Furthermore, we have evidence that the HDC gene cluster was transferred within Rémy Bruggmann the L. -
A Taxonomic Note on the Genus Lactobacillus
Taxonomic Description template 1 A taxonomic note on the genus Lactobacillus: 2 Description of 23 novel genera, emended description 3 of the genus Lactobacillus Beijerinck 1901, and union 4 of Lactobacillaceae and Leuconostocaceae 5 Jinshui Zheng1, $, Stijn Wittouck2, $, Elisa Salvetti3, $, Charles M.A.P. Franz4, Hugh M.B. Harris5, Paola 6 Mattarelli6, Paul W. O’Toole5, Bruno Pot7, Peter Vandamme8, Jens Walter9, 10, Koichi Watanabe11, 12, 7 Sander Wuyts2, Giovanna E. Felis3, #*, Michael G. Gänzle9, 13#*, Sarah Lebeer2 # 8 '© [Jinshui Zheng, Stijn Wittouck, Elisa Salvetti, Charles M.A.P. Franz, Hugh M.B. Harris, Paola 9 Mattarelli, Paul W. O’Toole, Bruno Pot, Peter Vandamme, Jens Walter, Koichi Watanabe, Sander 10 Wuyts, Giovanna E. Felis, Michael G. Gänzle, Sarah Lebeer]. 11 The definitive peer reviewed, edited version of this article is published in International Journal of 12 Systematic and Evolutionary Microbiology, https://doi.org/10.1099/ijsem.0.004107 13 1Huazhong Agricultural University, State Key Laboratory of Agricultural Microbiology, Hubei Key 14 Laboratory of Agricultural Bioinformatics, Wuhan, Hubei, P.R. China. 15 2Research Group Environmental Ecology and Applied Microbiology, Department of Bioscience 16 Engineering, University of Antwerp, Antwerp, Belgium 17 3 Dept. of Biotechnology, University of Verona, Verona, Italy 18 4 Max Rubner‐Institut, Department of Microbiology and Biotechnology, Kiel, Germany 19 5 School of Microbiology & APC Microbiome Ireland, University College Cork, Co. Cork, Ireland 20 6 University of Bologna, Dept. of Agricultural and Food Sciences, Bologna, Italy 21 7 Research Group of Industrial Microbiology and Food Biotechnology (IMDO), Vrije Universiteit 22 Brussel, Brussels, Belgium 23 8 Laboratory of Microbiology, Department of Biochemistry and Microbiology, Ghent University, Ghent, 24 Belgium 25 9 Department of Agricultural, Food & Nutritional Science, University of Alberta, Edmonton, Canada 26 10 Department of Biological Sciences, University of Alberta, Edmonton, Canada 27 11 National Taiwan University, Dept. -
Interstrain Variability of Human Vaginal Lactobacillus Crispatus for Metabolism of Biogenic Amines and Antimicrobial Activity Against Urogenital Pathogens
molecules Article Interstrain Variability of Human Vaginal Lactobacillus crispatus for Metabolism of Biogenic Amines and Antimicrobial Activity against Urogenital Pathogens Scarlett Puebla-Barragan 1,2 , Emiley Watson 1,2, Charlotte van der Veer 3 , John A. Chmiel 1,2 , Charles Carr 1, Jeremy P. Burton 1,2 , Mark Sumarah 4 , Remco Kort 5,6 and Gregor Reid 1,2,* 1 Canadian Centre for Human Microbiome and Probiotics, Lawson Health Research Institute, 268 Grosvenor Street, London, ON N6A 4V2, Canada; [email protected] (S.P.-B.); [email protected] (E.W.); [email protected] (J.A.C.); [email protected] (C.C.); [email protected] (J.P.B.) 2 Departments of Microbiology and Immunology, and Surgery, Western University, London, ON N6A 4V2, Canada 3 Department of Infectious Diseases, Public Health Service (GGD), Nieuwe Achtergracht 100, 1018 WT Amsterdam, The Netherlands; [email protected] 4 Agriculture and Agri-Food Canada, London, ON N5V 4T3, Canada; [email protected] 5 Department of Molecular Cell Biology, Faculty of Science, O2 Lab Building, Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, The Netherlands; [email protected] 6 ARTIS-Micropia, Plantage Kerklaan 38-40, 1018 CZ Amsterdam, The Netherlands Citation: Puebla-Barragan, S.; * Correspondence: [email protected]; Tel.: +1-519-646-6100 (ext. 65256) Watson, E.; van der Veer, C.; Chmiel, J.A.; Carr, C.; Burton, J.P.; Sumarah, Abstract: Lactobacillus crispatus is the dominant species in the vagina of many women. With the M.; Kort, R.; Reid, G. Interstrain potential for strains of this species to be used as a probiotic to help prevent and treat dysbiosis, we Variability of Human Vaginal investigated isolates from vaginal swabs with Lactobacillus-dominated and a dysbiotic microbiota. -
Vaginal Probiotic Lactobacillus Crispatus Seems to Inhibit Sperm Activity and Subsequently Reduces Pregnancies in Rat
fcell-09-705690 August 11, 2021 Time: 11:32 # 1 ORIGINAL RESEARCH published: 13 August 2021 doi: 10.3389/fcell.2021.705690 Vaginal Probiotic Lactobacillus crispatus Seems to Inhibit Sperm Activity and Subsequently Reduces Pregnancies in Rat Ping Li1, Kehong Wei1, Xia He2, Lu Zhang1, Zhaoxia Liu3, Jing Wei1, Xiaomei Chen1, Hong Wei4* and Tingtao Chen1* 1 School of Life Sciences, Institute of Translational Medicine, Nanchang University, Nanchang, China, 2 Department of Obstetrics and Gynecology, The Ninth Hospital of Nanchang, Nanchang, China, 3 Department of Obstetrics and Gynecology, The Second Affiliated Hospital of Nanchang University, Nanchang, China, 4 Institute of Precision Medicine, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China Background: The vaginal microbiota is associated with the health of the female reproductive system and the offspring. Lactobacillus crispatus belongs to one of the most important vaginal probiotics, while its role in the agglutination and immobilization Edited by: of human sperm, fertility, and offspring health is unclear. Bechan Sharma, University of Allahabad, India Methods: Adherence assays, sperm motility assays, and Ca2C-detecting assays were Reviewed by: used to analyze the adherence properties and sperm motility of L. crispatus Lcr-MH175, António Machado, Universidad San Francisco de Quito, attenuated Salmonella typhimurium VNP20009, engineered S. typhimurium VNP20009 Ecuador DNase I, and Escherichia coli O157:H7 in vitro. The rat reproductive model was further Margarita Aguilera, University of Granada, Spain developed to study the role of L. crispatus on reproduction and offspring health, using *Correspondence: high-throughput sequencing, real-time PCR, and molecular biology techniques. Tingtao Chen Our results indicated that L. -
Bacterial Communities in Women with Bacterial Vaginosis: High Resolution Phylogenetic Analyses Reveal Relationships of Microbiota to Clinical Criteria
Bacterial Communities in Women with Bacterial Vaginosis: High Resolution Phylogenetic Analyses Reveal Relationships of Microbiota to Clinical Criteria Sujatha Srinivasan1*, Noah G. Hoffman2, Martin T. Morgan3, Frederick A. Matsen3, Tina L. Fiedler1, Robert W. Hall4, Frederick J. Ross3, Connor O. McCoy3, Roger Bumgarner4, Jeanne M. Marrazzo5, David N. Fredricks1,4,5* 1 Vaccine & Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America, 2 Department of Laboratory Medicine, University of Washington, Seattle, Washington, United States of America, 3 Public Health Science Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America, 4 Department of Microbiology, University of Washington, Seattle, Washington, United States of America, 5 Department of Medicine, University of Washington, Seattle, Washington, United States of America Abstract Background: Bacterial vaginosis (BV) is a common condition that is associated with numerous adverse health outcomes and is characterized by poorly understood changes in the vaginal microbiota. We sought to describe the composition and diversity of the vaginal bacterial biota in women with BV using deep sequencing of the 16S rRNA gene coupled with species-level taxonomic identification. We investigated the associations between the presence of individual bacterial species and clinical diagnostic characteristics of BV. Methodology/Principal Findings: Broad-range 16S rRNA gene PCR and pyrosequencing were performed on vaginal swabs from 220 women with and without BV. BV was assessed by Amsel’s clinical criteria and confirmed by Gram stain. Taxonomic classification was performed using phylogenetic placement tools that assigned 99% of query sequence reads to the species level. Women with BV had heterogeneous vaginal bacterial communities that were usually not dominated by a single taxon. -
Analysis of the Composition of Lactobacilli in Humans
Note Bioscience Microflora Vol. 29 (1), 47–50, 2010 Analysis of the Composition of Lactobacilli in Humans Katsunori KIMURA1*, Tomoko NISHIO1, Chinami MIZOGUCHi1 and Akiko KOIZUMI1 1Division of Research and Development, Meiji Dairies Corporation, 540 Naruda, Odawara, Kanagawa 250-0862, Japan Received July 19, 2009; Accepted August 31, 2009 We collected fecal samples twice from 8 subjects and obtained 160 isolates of lactobacilli. The isolates were genetically fingerprinted and identified by pulsed-field gel electrophoresis (PFGE) and 16S rDNA sequence analysis, respectively. The numbers of lactobacilli detected in fecal samples varied greatly among the subjects. The isolates were divided into 37 strains by PFGE. No common strain was detected in the feces of different subjects. Except for one subject, at least one strain, unique to each individual, was detected in both fecal samples. The strains detected in both fecal samples were identified as Lactobacillus amylovorus, L. gasseri, L. fermentum, L. delbrueckii, L. crispatus, L. vaginalis and L. ruminis. They may be the indigenous Lactobacillus species in Japanese adults. Key words: lactobacilli; Lactobacillus; composition; identification; PFGE Members of the genus Lactobacillus are gram-positive was used to make a fecal homogenate in 9 ml of organisms that belong to the general category of lactic Trypticase soy broth without dextrose (BBL, acid bacteria. They inhabit a wide variety of habitats, Cockeysville, MD). A dilution series (10–1 to 10–7) was including foods, plants and the gastrointestinal tracts of made in the same medium, and 100-l aliquots of each humans and animals. Some Lactobacillus strains are dilution were spread on Rogosa SL agar (Difco, Sparks, used in the manufacture of fermented foods. -
The Microbiota Continuum Along the Female Reproductive Tract and Its Relation to Uterine-Related Diseases
ARTICLE DOI: 10.1038/s41467-017-00901-0 OPEN The microbiota continuum along the female reproductive tract and its relation to uterine-related diseases Chen Chen1,2, Xiaolei Song1,3, Weixia Wei4,5, Huanzi Zhong 1,2,6, Juanjuan Dai4,5, Zhou Lan1, Fei Li1,2,3, Xinlei Yu1,2, Qiang Feng1,7, Zirong Wang1, Hailiang Xie1, Xiaomin Chen1, Chunwei Zeng1, Bo Wen1,2, Liping Zeng4,5, Hui Du4,5, Huiru Tang4,5, Changlu Xu1,8, Yan Xia1,3, Huihua Xia1,2,9, Huanming Yang1,10, Jian Wang1,10, Jun Wang1,11, Lise Madsen 1,6,12, Susanne Brix 13, Karsten Kristiansen1,6, Xun Xu1,2, Junhua Li 1,2,9,14, Ruifang Wu4,5 & Huijue Jia 1,2,9,11 Reports on bacteria detected in maternal fluids during pregnancy are typically associated with adverse consequences, and whether the female reproductive tract harbours distinct microbial communities beyond the vagina has been a matter of debate. Here we systematically sample the microbiota within the female reproductive tract in 110 women of reproductive age, and examine the nature of colonisation by 16S rRNA gene amplicon sequencing and cultivation. We find distinct microbial communities in cervical canal, uterus, fallopian tubes and perito- neal fluid, differing from that of the vagina. The results reflect a microbiota continuum along the female reproductive tract, indicative of a non-sterile environment. We also identify microbial taxa and potential functions that correlate with the menstrual cycle or are over- represented in subjects with adenomyosis or infertility due to endometriosis. The study provides insight into the nature of the vagino-uterine microbiome, and suggests that sur- veying the vaginal or cervical microbiota might be useful for detection of common diseases in the upper reproductive tract. -
Lactobacillus Crispatus Protects Against Bacterial Vaginosis
Lactobacillus crispatus protects against bacterial vaginosis M.O. Almeida1, F.L.R. do Carmo1, A. Gala-García1, R. Kato1, A.C. Gomide1, R.M.N. Drummond2, M.M. Drumond3, P.M. Agresti1, D. Barh4, B. Brening5, P. Ghosh6, A. Silva7, V. Azevedo1 and 1,7 M.V.C. Viana 1 Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brasil 2 Departamento de Microbiologia, Ecologia e Evolução, , Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brasil 3 Departamento de Ciências Biológicas, Centro Federal de Educação Tecnologica de Minas Gerais, Belo Horizonte, MG, Brasil 4 Institute of Integrative Omics and Applied Biotechnology (IIOAB), Nonakuri, Purba Medinipur, West Bengal, India 5 Institute of Veterinary Medicine, University of Göttingen, Göttingen, Germany 6 Department of Computer Science, Virginia Commonwealth University, Richmond, Virginia, USA 7 Departamento de Genética, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém, PA, Brasil Corresponding author: V. Azevedo E-mail: [email protected] Genet. Mol. Res. 18 (4): gmr18475 Received August 16, 2019 Accepted October 23, 2019 Published November 30, 2019 DOI http://dx.doi.org/10.4238/gmr18475 ABSTRACT. In medicine, the 20th century was marked by one of the most important revolutions in infectious-disease management, the discovery and increasing use of antibiotics. However, their indiscriminate use has led to the emergence of multidrug-resistant (MDR) bacteria. Drug resistance and other factors, such as the production of bacterial biofilms, have resulted in high recurrence rates of bacterial diseases. Bacterial vaginosis (BV) syndrome is the most prevalent vaginal condition in women of reproductive age, Genetics and Molecular Research 18 (4): gmr18475 ©FUNPEC-RP www.funpecrp.com.br M.O. -
Current Progresses on Vaginal Microbiome, Bacterial Vaginosis and Biofilms
Current progresses on vaginal microbiome, bacterial vaginosis and biofilms Gary Ventolini1, Abdul Hamood2 1 Professor and Regional Dean School of Medicine Texas Tech University Health Sciences Center Permian Basin 800 West, 4th Street. Odessa, Texas, 79705 USA; 2 Professor Department of Immunology and Molecular Microbiology Texas Tech University Health Sciences Center 3601 4th Street. Lub- bock, Texas, 79430 USA. ABSTRACT Recent advances in vaginal microbiome research have indicated that dysbiosis is a complex disorder involving not only cellular and bacterial metabolites, but also hormonal and environmental factors. With newly attained information, harmful gynecological conditions like Bacterial Vaginosis could be efficiently treated to restore health and enhance quality of life across women’s lifespan. Furthermore, newest discoveries on Lactobacilli products and biofilms will let us take care of serious medical conditions. Particularly, relating to antibiotic resistant pathogen biofilm producers like Pseudomonas aeruginosa and benefit patients with severe infected burns and sepsis. We scrutinize the significance of the current progresses on vaginal microbiome, bacterial vaginosis and biofilms. KEYWORDS Vaginal microbiome, bacterial vaginosis, biofilm. Introduction Article history Received 4 May 2020 – Accepted 6 Jun 2020 It is crucial to promote the integration of the available in- Contact formation from the bench (biomedical science with its physi- Gary Ventolini; [email protected] ologic pathways) to bed side (practical clinical application of School of Medicine Texas Tech University Health Sciences Center Permian scientific developments). Basin 800 West, 4th Street. Odessa, Texas, 79705 USA The genital tract microbiome represents 9% of the total women’s microbiome [1]. Recent advances in vaginal microbi- ome research have indicated that dysbiosis is a complex disor- permitted in-depth study of the vaginal microbiome. -
A Taxonomic Note on the Genus Lactobacillus
TAXONOMIC DESCRIPTION Zheng et al., Int. J. Syst. Evol. Microbiol. DOI 10.1099/ijsem.0.004107 A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae Jinshui Zheng1†, Stijn Wittouck2†, Elisa Salvetti3†, Charles M.A.P. Franz4, Hugh M.B. Harris5, Paola Mattarelli6, Paul W. O’Toole5, Bruno Pot7, Peter Vandamme8, Jens Walter9,10, Koichi Watanabe11,12, Sander Wuyts2, Giovanna E. Felis3,*,†, Michael G. Gänzle9,13,*,† and Sarah Lebeer2† Abstract The genus Lactobacillus comprises 261 species (at March 2020) that are extremely diverse at phenotypic, ecological and gen- otypic levels. This study evaluated the taxonomy of Lactobacillaceae and Leuconostocaceae on the basis of whole genome sequences. Parameters that were evaluated included core genome phylogeny, (conserved) pairwise average amino acid identity, clade- specific signature genes, physiological criteria and the ecology of the organisms. Based on this polyphasic approach, we propose reclassification of the genus Lactobacillus into 25 genera including the emended genus Lactobacillus, which includes host- adapted organisms that have been referred to as the Lactobacillus delbrueckii group, Paralactobacillus and 23 novel genera for which the names Holzapfelia, Amylolactobacillus, Bombilactobacillus, Companilactobacillus, Lapidilactobacillus, Agrilactobacil- lus, Schleiferilactobacillus, Loigolactobacilus, Lacticaseibacillus, Latilactobacillus, Dellaglioa,