First Reports and Generic Descriptions of the Achlorophyllous Holoparasites Apodanthaceae (Cucurbitales) of Colombia
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Tree of Life Marula Oil in Africa
HerbalGram 79 • August – October 2008 HerbalGram 79 • August Herbs and Thyroid Disease • Rosehips for Osteoarthritis • Pelargonium for Bronchitis • Herbs of the Painted Desert The Journal of the American Botanical Council Number 79 | August – October 2008 Herbs and Thyroid Disease • Rosehips for Osteoarthritis • Pelargonium for Bronchitis • Herbs of the Painted Desert • Herbs of the Painted Bronchitis for Osteoarthritis Disease • Rosehips for • Pelargonium Thyroid Herbs and www.herbalgram.org www.herbalgram.org US/CAN $6.95 Tree of Life Marula Oil in Africa www.herbalgram.org Herb Pharm’s Botanical Education Garden PRESERVING THE FULL-SPECTRUM OF NATURE'S CHEMISTRY The Art & Science of Herbal Extraction At Herb Pharm we continue to revere and follow the centuries-old, time- proven wisdom of traditional herbal medicine, but we integrate that wisdom with the herbal sciences and technology of the 21st Century. We produce our herbal extracts in our new, FDA-audited, GMP- compliant herb processing facility which is located just two miles from our certified-organic herb farm. This assures prompt delivery of freshly-harvested herbs directly from the fields, or recently HPLC chromatograph showing dried herbs directly from the farm’s drying loft. Here we also biochemical consistency of 6 receive other organic and wildcrafted herbs from various parts of batches of St. John’s Wort extracts the USA and world. In producing our herbal extracts we use precision scientific instru- ments to analyze each herb’s many chemical compounds. However, You’ll find Herb Pharm we do not focus entirely on the herb’s so-called “active compound(s)” at fine natural products and, instead, treat each herb and its chemical compounds as an integrated whole. -
The Plant Press the ARIZONA NATIVE PLANT SOCIETY
The Plant Press THE ARIZONA NATIVE PLANT SOCIETY Volume 36, Number 1 Summer 2013 In this Issue: Plants of the Madrean Archipelago 1-4 Floras in the Madrean Archipelago Conference 5-8 Abstracts of Botanical Papers Presented in the Madrean Archipelago Conference Southwest Coralbean (Erythrina flabelliformis). Plus 11-19 Conservation Priority Floras in the Madrean Archipelago Setting for Arizona G1 Conference and G2 Plant Species: A Regional Assessment by Thomas R. Van Devender1. Photos courtesy the author. & Our Regular Features Today the term ‘bioblitz’ is popular, meaning an intensive effort in a short period to document the diversity of animals and plants in an area. The first bioblitz in the southwestern 2 President’s Note United States was the 1848-1855 survey of the new boundary between the United States and Mexico after the Treaty of Guadalupe Hidalgo of 1848 ended the Mexican-American War. 8 Who’s Who at AZNPS The border between El Paso, Texas and the Colorado River in Arizona was surveyed in 1855- 9 & 17 Book Reviews 1856, following the Gadsden Purchase in 1853. Besides surveying and marking the border with monuments, these were expeditions that made extensive animal and plant collections, 10 Spotlight on a Native often by U.S. Army physicians. Botanists John M. Bigelow (Charphochaete bigelovii), Charles Plant C. Parry (Agave parryi), Arthur C. V. Schott (Stephanomeria schotti), Edmund K. Smith (Rhamnus smithii), George Thurber (Stenocereus thurberi), and Charles Wright (Cheilanthes wrightii) made the first systematic plant collection in the Arizona-Sonora borderlands. ©2013 Arizona Native Plant In 1892-94, Edgar A. Mearns collected 30,000 animal and plant specimens on the second Society. -
Lessons from 20 Years of Plant Genome Sequencing: an Unprecedented Resource in Need of More Diverse Representation
bioRxiv preprint doi: https://doi.org/10.1101/2021.05.31.446451; this version posted May 31, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Lessons from 20 years of plant genome sequencing: an unprecedented resource in need of more diverse representation Authors: Rose A. Marks1,2,3, Scott Hotaling4, Paul B. Frandsen5,6, and Robert VanBuren1,2 1. Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA 2. Plant Resilience Institute, Michigan State University, East Lansing, MI 48824, USA 3. Department of Molecular and Cell Biology, University of Cape Town, Rondebosch 7701, South Africa 4. School of Biological Sciences, Washington State University, Pullman, WA, USA 5. Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, USA 6. Data Science Lab, Smithsonian Institution, Washington, DC, USA Keywords: plants, embryophytes, genomics, colonialism, broadening participation Correspondence: Rose A. Marks, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA; Email: [email protected]; Phone: (603) 852-3190; ORCID iD: https://orcid.org/0000-0001-7102-5959 Abstract The field of plant genomics has grown rapidly in the past 20 years, leading to dramatic increases in both the quantity and quality of publicly available genomic resources. With an ever- expanding wealth of genomic data from an increasingly diverse set of taxa, unprecedented potential exists to better understand the evolution and genome biology of plants. -
Cuba: Camagüey, Sierra De Cubitas
Cuba: Camagüey, Sierra de Cubitas 08 Rapid Biological Inventories : 08 Cuba: Camagüey, Sierra de Cubitas THE FIELD MUSEUM ograms 2496, USA Drive vation Pr – e 12.665.7433 5 3 r / Partial funding by Illinois 6060 , onmental & Conser .fieldmuseum.org/rbi 12.665.7430 F Medio Ambiente de Camagüey 3 T Chicago 1400 South Lake Shor www The Field Museum Envir Financiado po John D. and Catherine T. MacArthur Foundation Instituciones Participantes / Participating Institutions The Field Museum Museo Nacional de Historia Natural de Cuba Centro de Investigaciones de Rapid Biological Inventories Rapid biological rapid inventories 08 Cuba: Camagüey, Sierra de Cubitas Luis M. Díaz,William S.Alverson, Adelaida Barreto Valdés, y/and TatzyanaWachter, editores/editors ABRIL/APRIL 2006 Instituciones Participantes /Participating Institutions The Field Museum Museo Nacional de Historia Natural de Cuba Centro de Investigaciones de Medio Ambiente de Camagüey LOS INFORMES DE LOS INVENTARIOS BIOLÓGICOS RÁPIDOS SON Cita sugerida/Suggested citation PUBLICADOS POR/RAPID BIOLOGICAL INVENTORIES REPORTS ARE Díaz, L., M., W. S. Alverson, A. Barreto V., y/ and T. Wachter. 2006. PUBLISHED BY: Cuba: Camagüey, Sierra de Cubitas. Rapid Biological Inventories Report 08. The Field Museum, Chicago. THE FIELD MUSEUM Environmental and Conservation Programs Créditos fotográficos/Photography credits 1400 South Lake Shore Drive Carátula / Cover: En la Sierra de Cubitas, hay una inusual frecuencia Chicago Illinois 60605-2496, USA del chipojo ceniciento (Chamaeleolis chamaeleonides, Iguanidae), T 312.665.7430, F 312.665.7433 tanto los adultos como los juveniles. Esta especie incluye en www.fieldmuseum.org su dieta gran cantidad de caracoles, que son muy comunes en las Editores/Editors rocas y los suelos calizos de la Sierra. -
December 2012 Number 1
Calochortiana December 2012 Number 1 December 2012 Number 1 CONTENTS Proceedings of the Fifth South- western Rare and Endangered Plant Conference Calochortiana, a new publication of the Utah Native Plant Society . 3 The Fifth Southwestern Rare and En- dangered Plant Conference, Salt Lake City, Utah, March 2009 . 3 Abstracts of presentations and posters not submitted for the proceedings . 4 Southwestern cienegas: Rare habitats for endangered wetland plants. Robert Sivinski . 17 A new look at ranking plant rarity for conservation purposes, with an em- phasis on the flora of the American Southwest. John R. Spence . 25 The contribution of Cedar Breaks Na- tional Monument to the conservation of vascular plant diversity in Utah. Walter Fertig and Douglas N. Rey- nolds . 35 Studying the seed bank dynamics of rare plants. Susan Meyer . 46 East meets west: Rare desert Alliums in Arizona. John L. Anderson . 56 Calochortus nuttallii (Sego lily), Spatial patterns of endemic plant spe- state flower of Utah. By Kaye cies of the Colorado Plateau. Crystal Thorne. Krause . 63 Continued on page 2 Copyright 2012 Utah Native Plant Society. All Rights Reserved. Utah Native Plant Society Utah Native Plant Society, PO Box 520041, Salt Lake Copyright 2012 Utah Native Plant Society. All Rights City, Utah, 84152-0041. www.unps.org Reserved. Calochortiana is a publication of the Utah Native Plant Society, a 501(c)(3) not-for-profit organi- Editor: Walter Fertig ([email protected]), zation dedicated to conserving and promoting steward- Editorial Committee: Walter Fertig, Mindy Wheeler, ship of our native plants. Leila Shultz, and Susan Meyer CONTENTS, continued Biogeography of rare plants of the Ash Meadows National Wildlife Refuge, Nevada. -
Full of Beans: a Study on the Alignment of Two Flowering Plants Classification Systems
Full of beans: a study on the alignment of two flowering plants classification systems Yi-Yun Cheng and Bertram Ludäscher School of Information Sciences, University of Illinois at Urbana-Champaign, USA {yiyunyc2,ludaesch}@illinois.edu Abstract. Advancements in technologies such as DNA analysis have given rise to new ways in organizing organisms in biodiversity classification systems. In this paper, we examine the feasibility of aligning two classification systems for flowering plants using a logic-based, Region Connection Calculus (RCC-5) ap- proach. The older “Cronquist system” (1981) classifies plants using their mor- phological features, while the more recent Angiosperm Phylogeny Group IV (APG IV) (2016) system classifies based on many new methods including ge- nome-level analysis. In our approach, we align pairwise concepts X and Y from two taxonomies using five basic set relations: congruence (X=Y), inclusion (X>Y), inverse inclusion (X<Y), overlap (X><Y), and disjointness (X!Y). With some of the RCC-5 relationships among the Fabaceae family (beans family) and the Sapindaceae family (maple family) uncertain, we anticipate that the merging of the two classification systems will lead to numerous merged solutions, so- called possible worlds. Our research demonstrates how logic-based alignment with ambiguities can lead to multiple merged solutions, which would not have been feasible when aligning taxonomies, classifications, or other knowledge or- ganization systems (KOS) manually. We believe that this work can introduce a novel approach for aligning KOS, where merged possible worlds can serve as a minimum viable product for engaging domain experts in the loop. Keywords: taxonomy alignment, KOS alignment, interoperability 1 Introduction With the advent of large-scale technologies and datasets, it has become increasingly difficult to organize information using a stable unitary classification scheme over time. -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S. -
Species Summary
Gastrolobium spinosum LC Taxonomic Authority: Benth. Global Assessment Regional Assessment Region: Global Endemic to region Synonyms Common Names PRICKLY POISON English (Primary) Upper Level Taxonomy Kingdom: PLANTAE Phylum: TRACHEOPHYTA Class: MAGNOLIOPSIDA Order: FABALES Family: LEGUMINOSAE Lower Level Taxonomy Rank: Infra- rank name: Plant Hybrid Subpopulation: Authority: This is an extremely variable species, in both leaf shape and size. It resembles Gastrolobium aculeatum, G. euryphyllum, G. triangulare, G. trilobum and G. wonganensis. There are several known varieties. General Information Distribution Gastrolobium spinosum is endemic to Australia, distributed in the state of Western Australia. Range Size Elevation Biogeographic Realm Area of Occupancy: Upper limit: 520 Afrotropical Extent of Occurrence: Lower limit: Antarctic Map Status: Depth Australasian Upper limit: Neotropical Lower limit: Oceanian Depth Zones Palearctic Shallow photic Bathyl Hadal Indomalayan Photic Abyssal Nearctic Population Total population size is not known but it was recently collected in 2008. Total Population Size Minimum Population Size: Maximum Population Size: Habitat and Ecology This prickly bushy to erect shrub grows in a wide range of habitats, from sand plains to mountain escarpment, on sandy soils to clay-loam soils in forest, woodland, malee and heathland. It is pollinated by insects and it is higly toxic to stock (Chandler et al. 2002). Mostly found in small colonies a little inland on heavier soils particularly with a rocky substrate, but usually within the agricultural zone (Archer 2009). System Movement pattern Crop Wild Relative Terrestrial Freshwater Nomadic Congregatory/Dispersive Is the species a wild relative of a crop? Marine Migratory Altitudinally migrant Growth From Definition Shrub - large Perennial shrub (>1m), also termed a Phanerophyte (>1m) Threats There are no major threats known to this species. -
Phylogeny of Rosids! ! Rosids! !
Phylogeny of Rosids! Rosids! ! ! ! ! Eurosids I Eurosids II Vitaceae Saxifragales Eurosids I:! Eurosids II:! Zygophyllales! Brassicales! Celastrales! Malvales! Malpighiales! Sapindales! Oxalidales! Myrtales! Fabales! Geraniales! Rosales! Cucurbitales! Fagales! After Jansen et al., 2007, Proc. Natl. Acad. Sci. USA 104: 19369-19374! Phylogeny of Rosids! Rosids! ! ! ! ! Eurosids I Eurosids II Vitaceae Saxifragales Eurosids I:! Eurosids II:! Zygophyllales! Brassicales! Celastrales! Malvales! Malpighiales! Sapindales! Oxalidales! Myrtales! Fabales! Geraniales! Rosales! Cucurbitales! Fagales! After Jansen et al., 2007, Proc. Natl. Acad. Sci. USA 104: 19369-19374! Alnus - alders A. rubra A. rhombifolia A. incana ssp. tenuifolia Alnus - alders Nitrogen fixation - symbiotic with the nitrogen fixing bacteria Frankia Alnus rubra - red alder Alnus rhombifolia - white alder Alnus incana ssp. tenuifolia - thinleaf alder Corylus cornuta - beaked hazel Carpinus caroliniana - American hornbeam Ostrya virginiana - eastern hophornbeam Phylogeny of Rosids! Rosids! ! ! ! ! Eurosids I Eurosids II Vitaceae Saxifragales Eurosids I:! Eurosids II:! Zygophyllales! Brassicales! Celastrales! Malvales! Malpighiales! Sapindales! Oxalidales! Myrtales! Fabales! Geraniales! Rosales! Cucurbitales! Fagales! After Jansen et al., 2007, Proc. Natl. Acad. Sci. USA 104: 19369-19374! Fagaceae (Beech or Oak family) ! Fagaceae - 9 genera/900 species.! Trees or shrubs, mostly northern hemisphere, temperate region ! Leaves simple, alternate; often lobed, entire or serrate, deciduous -
Post-Fire Recovery of Woody Plants in the New England Tableland Bioregion
Post-fire recovery of woody plants in the New England Tableland Bioregion Peter J. ClarkeA, Kirsten J. E. Knox, Monica L. Campbell and Lachlan M. Copeland Botany, School of Environmental and Rural Sciences, University of New England, Armidale, NSW 2351, AUSTRALIA. ACorresponding author; email: [email protected] Abstract: The resprouting response of plant species to fire is a key life history trait that has profound effects on post-fire population dynamics and community composition. This study documents the post-fire response (resprouting and maturation times) of woody species in six contrasting formations in the New England Tableland Bioregion of eastern Australia. Rainforest had the highest proportion of resprouting woody taxa and rocky outcrops had the lowest. Surprisingly, no significant difference in the median maturation length was found among habitats, but the communities varied in the range of maturation times. Within these communities, seedlings of species killed by fire, mature faster than seedlings of species that resprout. The slowest maturing species were those that have canopy held seed banks and were killed by fire, and these were used as indicator species to examine fire immaturity risk. Finally, we examine whether current fire management immaturity thresholds appear to be appropriate for these communities and find they need to be amended. Cunninghamia (2009) 11(2): 221–239 Introduction Maturation times of new recruits for those plants killed by fire is also a critical biological variable in the context of fire Fire is a pervasive ecological factor that influences the regimes because this time sets the lower limit for fire intervals evolution, distribution and abundance of woody plants that can cause local population decline or extirpation (Keith (Whelan 1995; Bond & van Wilgen 1996; Bradstock et al. -
Revision of the Australian Bee Genus Trichocolletes Cockerell (Hymenoptera: Colletidae: Paracolletini)
AUSTRALIAN MUSEUM SCIENTIFIC PUBLICATIONS Batley, Michael, and Terry F. Houston, 2012. Revision of the Australian bee genus Trichocolletes Cockerell (Hymenoptera: Colletidae: Paracolletini). Records of the Australian Museum 64(1): 1–50. [Published 23 May 2012]. http://dx.doi.org/10.3853/j.0067-1975.64.2012.1589 ISSN 0067-1975 Published by the Australian Museum, Sydney nature culture discover Australian Museum science is freely accessible online at http://publications.australianmuseum.net.au 6 College Street, Sydney NSW 2010, Australia © The Authors, 2012. Journal compilation © Australian Museum, Sydney, 2012 Records of the Australian Museum (2012) Vol. 64: 1–50. ISSN 0067-1975 http://dx.doi.org/10.3853/j.0067-1975.64.2012.1589 Revision of the Australian Bee Genus Trichocolletes Cockerell (Hymenoptera: Colletidae: Paracolletini) Michael Batley1* and terry F. houston2 1 Australian Museum, 6 College Street, Sydney NSW 2010, Australia [email protected] 2 Western Australian Museum, Locked Bag 49, Welshpool D.C. WA 6986, Australia [email protected] aBstract. The endemic Australian bee genus Trichocolletes is revised. Forty species are recognised, including twenty-three new species: Trichocolletes aeratus, T. albigenae, T. avialis, T. brachytomus, T. brunilabrum, T. capillosus, T. centralis, T. dundasensis, T. fuscus, T. gelasinus, T. grandis, T. lacaris, T. leucogenys, T. luteorufus, T. macrognathus, T. micans, T. nitens, T. orientalis, T. platyprosopis, T. serotinus, T. simus, T. soror and T. tuberatus. Four new synonymies are proposed: Paracolletes marginatus lucidus Cockerell, 1929 = T. chrysostomus (Cockerell, 1929); T. daviesiae Rayment, 1931 = T. venustus (Smith, 1862); T. marginatulus Michener, 1965 = T. sericeus (Smith, 1862); T. nigroclypeatus Rayment, 1929 = T. -
Updated Angiosperm Family Tree for Analyzing Phylogenetic Diversity and Community Structure
Acta Botanica Brasilica - 31(2): 191-198. April-June 2017. doi: 10.1590/0102-33062016abb0306 Updated angiosperm family tree for analyzing phylogenetic diversity and community structure Markus Gastauer1,2* and João Augusto Alves Meira-Neto2 Received: August 19, 2016 Accepted: March 3, 2017 . ABSTRACT Th e computation of phylogenetic diversity and phylogenetic community structure demands an accurately calibrated, high-resolution phylogeny, which refl ects current knowledge regarding diversifi cation within the group of interest. Herein we present the angiosperm phylogeny R20160415.new, which is based on the topology proposed by the Angiosperm Phylogeny Group IV, a recently released compilation of angiosperm diversifi cation. R20160415.new is calibratable by diff erent sets of recently published estimates of mean node ages. Its application for the computation of phylogenetic diversity and/or phylogenetic community structure is straightforward and ensures the inclusion of up-to-date information in user specifi c applications, as long as users are familiar with the pitfalls of such hand- made supertrees. Keywords: angiosperm diversifi cation, APG IV, community tree calibration, megatrees, phylogenetic topology phylogeny comprising the entire taxonomic group under Introduction study (Gastauer & Meira-Neto 2013). Th e constant increase in knowledge about the phylogenetic The phylogenetic structure of a biological community relationships among taxa (e.g., Cox et al. 2014) requires regular determines whether species that coexist within a given revision of applied phylogenies in order to incorporate novel data community are more closely related than expected by chance, and is essential information for investigating and avoid out-dated information in analyses of phylogenetic community assembly rules (Kembel & Hubbell 2006; diversity and community structure.