bioRxiv preprint doi: https://doi.org/10.1101/668715; this version posted June 12, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Manuscript SUBMITTED TO eLife 1 FrOM PLASMODESMA GEOMETRY TO 2 EffECTIVE SYMPLASTIC PERMEABILITY 3 THROUGH BIOPHYSICAL MODELLING 1* 2† 3,4† 4 Eva E. Deinum , YOSELIN Benitez-Alfonso , Bela M. Mulder *For CORRespondence: Mathematical AND STATISTICAL METHODS (Biometris), WAGENINGEN University, Wageningen,
[email protected] (EED) 5 1 6708 PB, THE Netherlands; CentrE FOR Plant Science, School OF Biology, University OF 6 2 †These AUTHORS CONTRIBUTED EQUALLY Leeds, Leeds LS2 9JT, UK; Living Matter Department, INSTITUTE AMOLF, Amsterdam, 1098 TO THIS WORK 7 3 XG, THE Netherlands; LaborATORY OF Cell Biology, WAGENINGEN University, Wageningen, 8 4 6708 PB, THE Netherlands 9 10 11 AbstrACT Regulation OF MOLECULAR TRANSPORT VIA INTERCELLULAR CHANNELS CALLED PLASMODESMATA 12 (PDs) IS IMPORTANT FOR both, THE COORDINATION OF DEVELOPMENTAL AND ENVIRONMENTAL RESPONSES 13 AMONG NEIGHBOURING CELLS AND THE ISOLATION OF CELL DOMAINS TO EXECUTE SPECIfiC DEVELOPMENTAL OR 14 STRess-induced PROGRams. PD TRANSPORT CAPACITY (i.e. EffECTIVE SYMPLASTIC permeability) HAS BEEN 15 DETERMINED EXPERIMENTALLY, AT A TISSUE LEvel, BY ASSESSING THE MOBILITY OF DIffERENT flUORESCENT 16 molecules, OR PREDICTED FROM PD ULTRASTRUCTURAL FEATURES USING ELECTRon-micrOSCOPY. VALUES 17 OBTAINED FROM THESE APPROACHES ARE OFTEN VERY DIffERent. Here, WE BUILD A THEORETICAL BRIDGE 18 BETWEEN THE TWO EXPERIMENTAL APPROACHES BY CALCULATING THE EffECTIVE SYMPLASTIC PERMEABILITY 19 FROM A GEOMETRICAL DESCRIPTION OF INDIVIDUAL PDs, CONSIDERING THE flOW TOWARDS THEM AND INCLUDING 20 THE IMPACT OF PD CLUSTERING INTO PIT fields.