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Supplementary Table 3. Marker in each malignant epithelial cells cluster Log(Fold-change) Pct.1 Pct.2 Adj p- value Cluster LEFTY1 2.690865644 0.899 0.067 0.00E+00 C1 TFF2 2.186713379 0.855 0.36 0.00E+00 C1 CCT2 1.701377329 0.801 0.283 0.00E+00 C1 SPINK4 1.663911876 0.654 0.128 0.00E+00 C1 TFF3 1.632604627 0.882 0.43 0.00E+00 C1 CXCL17 1.616238928 0.659 0.079 0.00E+00 C1 LDHB 1.407263152 0.711 0.137 0.00E+00 C1 CLDN18 1.398880496 0.825 0.278 0.00E+00 C1 TESC 1.382790712 0.79 0.212 0.00E+00 C1 PDIA6 1.295630983 0.789 0.404 0.00E+00 C1 PSCA 1.263596359 0.922 0.241 0.00E+00 C1 SRD5A3 1.246561606 0.586 0.098 0.00E+00 C1 PDIA4 1.180717046 0.849 0.419 0.00E+00 C1 DPCR1 1.175754587 0.506 0.06 0.00E+00 C1 WBP5 1.163957541 0.734 0.106 0.00E+00 C1 LYZ 1.141614179 0.969 0.727 0.00E+00 C1 RAP1B 1.125989315 0.68 0.255 0.00E+00 C1 S100P 1.055862172 0.962 0.758 0.00E+00 C1 OS9 1.05478066 0.787 0.338 0.00E+00 C1 R3HDM2 1.031695733 0.742 0.167 0.00E+00 C1 B3GNT7 1.031632795 0.549 0.088 0.00E+00 C1 MORF4L1 1.023176967 0.768 0.409 0.00E+00 C1 TMEM165 0.999912261 0.649 0.196 0.00E+00 C1 GALNT3 0.995165397 0.705 0.254 0.00E+00 C1 TFF1 0.962929536 0.96 0.591 0.00E+00 C1 LY6D 0.94328396 0.484 0.007 0.00E+00 C1 MIA 0.895355862 0.623 0.103 0.00E+00 C1 MDM2 0.864864363 0.615 0.089 0.00E+00 C1 YEATS4 0.864197638 0.585 0.128 0.00E+00 C1 CPM 0.831257805 0.511 0.026 0.00E+00 C1 NGFRAP1 0.776686405 0.552 0.027 0.00E+00 C1 TCEAL8 0.747773737 0.549 0.064 0.00E+00 C1 SFTA2 0.710176136 0.52 0.066 0.00E+00 C1 FKBP10 0.567908872 0.427 0.007 0.00E+00 C1 HOXB2 0.52009395 0.466 0.03 0.00E+00 C1 ALDH1L1 0.478075328 0.386 0.009 0.00E+00 C1 BCAR4 0.405445074 0.384 0 0.00E+00 C1 YWHAE 0.941441648 0.797 0.453 6.63E-301 C1 MUC5B 0.749504079 0.441 0.032 9.41E-296 C1 PKM 1.024781554 0.835 0.518 4.67E-293 C1 ATP1B1 1.094054311 0.838 0.514 5.73E-290 C1 PRKCDBP 0.521875888 0.445 0.04 1.78E-288 C1 PTP4A2 1.006611051 0.74 0.358 1.11E-281 C1 RAB34 0.379470725 0.394 0.022 1.26E-279 C1 C1QBP 1.055652495 0.699 0.29 1.74E-277 C1 AGR2 1.043123785 0.967 0.832 7.02E-277 C1

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VSIG1 0.728079807 0.537 0.093 8.17E-275 C1 NUP107 0.744204709 0.569 0.123 2.00E-274 C1 REG4 1.083913316 0.905 0.499 1.30E-270 C1 RP11-10A14.5 0.297216094 0.321 0 2.05E-269 C1 PTPLAD1 0.947636123 0.666 0.255 8.18E-269 C1 KRT17 0.903244887 0.401 0.03 1.67E-268 C1 DSTN 0.854726665 0.853 0.613 3.41E-268 C1 GALNT7 0.709216869 0.631 0.165 7.55E-268 C1 TFPI 0.753551093 0.647 0.186 1.34E-262 C1 HSP90AB1 0.844714478 0.922 0.665 7.40E-262 C1 SRSF9 0.978838275 0.658 0.282 6.15E-261 C1 GPR110 0.792021592 0.397 0.033 1.05E-256 C1 YWHAQ 0.917645011 0.684 0.318 3.66E-256 C1 SCGB2A1 0.350719764 0.323 0.005 1.20E-255 C1 DCTN2 0.855691592 0.617 0.219 2.39E-255 C1 CDK4 0.96724454 0.603 0.204 5.51E-255 C1 BEX2 0.312185722 0.323 0.006 1.10E-252 C1 ZFAND6 0.859643177 0.62 0.228 7.87E-251 C1 HSP90B1 0.894697739 0.881 0.592 7.89E-251 C1 RP11-2E17.1 0.333995995 0.3 0 1.03E-250 C1 CSTB 1.133047426 0.85 0.649 1.19E-248 C1 ULBP2 0.349850496 0.325 0.009 4.54E-247 C1 PUM1 0.730101664 0.655 0.226 1.47E-245 C1 CLIC1 1.06446547 0.835 0.65 1.46E-244 C1 BACE2 0.776146486 0.629 0.21 1.42E-242 C1 ANXA5 0.701165432 0.568 0.159 9.35E-239 C1 ZFC3H1 0.677887382 0.611 0.17 8.10E-234 C1 MAL2 0.952741646 0.742 0.397 1.27E-233 C1 MBD6 0.504246192 0.497 0.097 3.90E-231 C1 RBM47 0.886709293 0.705 0.357 5.12E-229 C1 TUBB 0.948856295 0.719 0.338 1.85E-228 C1 RAB3IP 0.740840685 0.566 0.161 5.86E-226 C1 SMC5 0.620713614 0.591 0.179 4.29E-224 C1 PIP4K2C 0.444414038 0.423 0.064 6.67E-223 C1 SLC35E3 0.422166937 0.392 0.05 3.86E-221 C1 ARL14 1.302472547 0.738 0.367 1.90E-220 C1 ANXA10 0.781303497 0.751 0.311 4.97E-220 C1 FRS2 0.36581964 0.368 0.039 5.55E-219 C1 SERINC2 0.751146496 0.785 0.471 1.10E-218 C1 HMGA1 0.836465129 0.781 0.485 1.33E-218 C1 C8orf4 0.869162861 0.726 0.288 7.08E-215 C1 RP11-519G16.5 0.275871768 0.278 0.005 2.19E-214 C1 FDFT1 0.88076215 0.625 0.257 6.92E-212 C1 TMED2 0.851218937 0.676 0.347 6.88E-210 C1 KRT19 0.82881006 0.969 0.874 4.18E-209 C1 CHMP1B 0.767154492 0.692 0.311 8.40E-209 C1 MTDH 0.719515427 0.792 0.488 4.07E-208 C1 RAB32 0.275438262 0.344 0.032 1.08E-204 C1

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RAB21 0.481720994 0.478 0.11 8.39E-204 C1 CAP1 0.845841827 0.641 0.316 3.80E-203 C1 MYL12A 0.947954026 0.817 0.649 7.09E-203 C1 SDCBP 0.777669854 0.685 0.346 1.33E-202 C1 STARD10 0.733799598 0.854 0.536 1.36E-202 C1 SRP9 0.782786299 0.677 0.355 4.62E-202 C1 AHR 0.538273196 0.573 0.167 5.71E-202 C1 AKIRIN1 0.47764806 0.499 0.126 1.29E-201 C1 PDIA3 0.795061975 0.766 0.484 2.87E-197 C1 AKAP13 0.749638262 0.693 0.319 4.44E-197 C1 DST 0.680727101 0.706 0.282 5.07E-197 C1 TSPAN31 0.445008926 0.459 0.103 4.70E-196 C1 ANXA1 0.990611597 0.623 0.236 2.26E-195 C1 ANXA2 0.923005092 0.867 0.733 1.09E-194 C1 TFPT 0.433556663 0.492 0.12 3.67E-194 C1 SYNE4 0.276709421 0.295 0.018 5.91E-194 C1 PABPC1 0.58828564 0.933 0.752 9.95E-194 C1 MGST1 0.72142683 0.648 0.274 3.87E-193 C1 HIST1H2BK 0.845917465 0.665 0.342 6.48E-193 C1 MAGED1 0.397100639 0.427 0.082 1.45E-192 C1 CRK 0.526217931 0.559 0.178 2.04E-192 C1 TSPAN3 0.754095483 0.776 0.493 1.67E-191 C1 AGAP2 0.324034798 0.251 0.005 1.72E-191 C1 ARMCX3 0.393037375 0.435 0.087 9.19E-191 C1 MARS 0.507454194 0.464 0.107 1.66E-190 C1 RAN 0.831480759 0.747 0.465 1.81E-190 C1 ECI2 0.572148619 0.455 0.112 3.03E-190 C1 RHBDL2 0.416071426 0.456 0.102 9.05E-190 C1 HSPA5 0.813668975 0.775 0.442 5.45E-189 C1 ICAM2 0.282680792 0.283 0.017 1.47E-188 C1 CTSE 0.630732705 0.717 0.316 1.78E-187 C1 ZNF430 0.427332087 0.379 0.063 2.47E-187 C1 TM4SF1 1.0672273 0.705 0.377 4.05E-187 C1 VAPA 0.771645976 0.65 0.343 1.27E-186 C1 RCAN1 0.635068931 0.409 0.077 5.09E-186 C1 FRMD4B 0.610702297 0.43 0.092 1.65E-185 C1 DDIT3 0.796008573 0.606 0.219 1.93E-185 C1 PRPF4B 0.740129307 0.815 0.408 7.56E-184 C1 ABCF1 0.663423185 0.722 0.338 8.01E-184 C1 LDLR 0.774135152 0.71 0.337 2.04E-183 C1 TSPAN13 0.69173611 0.603 0.26 3.34E-183 C1 ACTR2 0.644131887 0.651 0.298 1.18E-182 C1 RAB11FIP1 0.797810148 0.766 0.437 3.38E-181 C1 NDUFV2 0.780467632 0.671 0.38 5.18E-180 C1 KRT7 0.686045312 0.698 0.306 1.03E-179 C1 NMB 0.452105539 0.428 0.099 1.55E-179 C1 SQLE 0.820767424 0.628 0.258 1.61E-179 C1 ADAM17 0.421792244 0.455 0.111 2.05E-178 C1

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DUSP4 0.448374151 0.468 0.116 3.14E-178 C1 MLF1 0.326425154 0.333 0.044 6.16E-178 C1 IL1R2 0.438702039 0.379 0.062 8.72E-178 C1 KLF5 0.715777433 0.715 0.396 2.02E-177 C1 UBC 0.67976553 0.953 0.873 6.37E-177 C1 TIMP1 0.637993444 0.653 0.276 7.90E-177 C1 RBPMS 0.307079432 0.36 0.056 1.31E-176 C1 SELK 0.716351523 0.716 0.421 1.94E-174 C1 CLIC6 0.265867931 0.253 0.013 3.95E-172 C1 HEBP2 0.631908603 0.714 0.393 1.12E-170 C1 GCNT2 0.470513382 0.397 0.077 1.25E-170 C1 YBX3 0.612916652 0.68 0.321 1.93E-170 C1 RHOF 0.538126719 0.545 0.174 4.40E-170 C1 RTN4 0.675104425 0.674 0.356 1.09E-169 C1 IDH1 0.634194486 0.658 0.307 1.46E-168 C1 LRRFIP1 0.661080293 0.735 0.423 1.88E-168 C1 PRKCI 0.465440765 0.467 0.133 5.45E-168 C1 RAP2B 0.546435477 0.553 0.186 1.27E-167 C1 REL 0.701246107 0.58 0.228 5.11E-167 C1 ACBD3 0.4514312 0.514 0.165 3.34E-166 C1 SLC17A9 0.474566396 0.39 0.075 1.53E-165 C1 PMEPA1 0.527426407 0.434 0.108 3.38E-164 C1 UGCG 0.527086143 0.488 0.15 4.69E-164 C1 AZGP1 0.422761604 0.493 0.14 1.16E-163 C1 SCD 0.650939626 0.483 0.149 2.22E-163 C1 UBE2E3 0.521908254 0.539 0.207 3.75E-163 C1 HOXB4 0.30709314 0.272 0.024 1.30E-162 C1 RRBP1 0.686783971 0.946 0.727 1.57E-162 C1 TPD52L1 0.260478907 0.32 0.043 2.48E-162 C1 MYO1C 0.520844479 0.586 0.208 7.82E-162 C1 C12orf75 0.841641896 0.679 0.38 8.18E-162 C1 GSPT1 0.526616852 0.582 0.242 2.10E-160 C1 ABHD17C 0.538738634 0.537 0.192 3.86E-158 C1 ACSL3 0.406750671 0.478 0.145 1.31E-157 C1 GPRC5A 0.755154359 0.7 0.399 8.02E-157 C1 PFN1 0.756852374 0.864 0.788 1.42E-156 C1 LMNA 0.583815958 0.875 0.669 1.57E-156 C1 HNRNPA3 0.621559821 0.769 0.492 3.64E-156 C1 MCL1 0.806820459 0.701 0.425 4.21E-156 C1 WHAMM 0.349313728 0.379 0.079 1.98E-154 C1 SRPK1 0.530525058 0.572 0.242 2.08E-154 C1 RDH11 0.449706655 0.477 0.147 2.79E-154 C1 USP14 0.383828842 0.45 0.128 4.05E-154 C1 TMEM66 0.621665665 0.623 0.308 7.54E-154 C1 CREB3L1 0.503452513 0.517 0.182 7.78E-154 C1 ENAH 0.419839954 0.47 0.14 7.10E-153 C1 EIF3I 0.689146404 0.646 0.363 1.72E-152 C1 C4BPB 0.313614512 0.34 0.061 2.55E-152 C1

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MSMO1 0.549774328 0.438 0.126 6.18E-152 C1 MTHFS 0.497024114 0.53 0.199 1.60E-151 C1 ONECUT2 0.516705811 0.541 0.186 5.10E-151 C1 ADAM9 0.398395405 0.504 0.162 5.56E-151 C1 YES1 0.357407104 0.419 0.11 2.35E-150 C1 PPIB 0.666987429 0.759 0.528 2.95E-150 C1 KIAA1430 0.40896522 0.44 0.122 3.39E-150 C1 SKIL 0.453436868 0.519 0.173 3.92E-150 C1 SDC4 0.721646347 0.69 0.366 1.32E-149 C1 TAOK3 0.556422202 0.693 0.339 1.60E-149 C1 TMED3 0.575936005 0.656 0.346 2.18E-148 C1 RNMT 0.540847513 0.654 0.288 2.33E-148 C1 GPX1 0.610892166 0.752 0.533 2.10E-147 C1 SNRPD1 0.665510024 0.712 0.423 2.93E-147 C1 LIMS1 0.370651297 0.454 0.137 6.70E-147 C1 MORF4L2 0.577776357 0.669 0.375 6.85E-147 C1 CT83 0.275229979 0.332 0.06 5.72E-146 C1 TRIAP1 0.437387336 0.451 0.146 8.85E-146 C1 TMC5 0.680777499 0.858 0.636 1.06E-144 C1 KCNK1 0.496136968 0.491 0.172 4.60E-144 C1 B4GALT1 0.532747586 0.484 0.163 5.25E-144 C1 NOL10 0.318819379 0.378 0.094 1.20E-143 C1 TJP1 0.47440642 0.519 0.189 1.44E-143 C1 RAB11A 0.617191883 0.661 0.39 1.71E-143 C1 CHD3 0.517524559 0.439 0.124 5.62E-143 C1 AFG3L2 0.481910967 0.558 0.214 8.72E-143 C1 ZCCHC17 0.380067623 0.455 0.149 2.20E-142 C1 THRAP3 0.503278519 0.61 0.276 2.62E-142 C1 RAB1A 0.587667295 0.645 0.358 1.14E-141 C1 FAM103A1 0.380464791 0.475 0.162 1.15E-141 C1 PSMB6 0.664861403 0.64 0.384 1.87E-141 C1 TJP2 0.54045939 0.579 0.246 2.26E-141 C1 IAH1 0.410177285 0.482 0.17 2.53E-141 C1 DNAJA1 0.584293486 0.682 0.388 3.21E-141 C1 TBC1D15 0.318231185 0.382 0.094 7.96E-141 C1 CLOCK 0.313171162 0.353 0.074 2.72E-140 C1 ARF6 0.540587889 0.586 0.261 6.36E-140 C1 TPM4 0.585221901 0.684 0.387 8.77E-140 C1 CA9 0.331351757 0.318 0.057 2.04E-139 C1 KRAS 0.423469378 0.49 0.175 7.09E-139 C1 HDLBP 0.587212207 0.72 0.408 2.37E-138 C1 SLC44A4 0.53841148 0.762 0.452 6.94E-138 C1 METTL1 0.373822919 0.364 0.087 1.21E-137 C1 HSD17B12 0.47718659 0.554 0.235 1.59E-137 C1 RHOA 0.56139513 0.734 0.492 2.56E-137 C1 MSMB 0.535467016 0.458 0.138 3.36E-137 C1 MRPS15 0.523817684 0.603 0.299 4.36E-137 C1 SUCLG2 0.533447669 0.588 0.286 2.04E-136 C1

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NDUFV3 0.473401886 0.627 0.303 2.37E-136 C1 MAGED2 0.298086218 0.381 0.096 3.16E-136 C1 MRPS18B 0.460518273 0.551 0.231 9.05E-136 C1 SNRNP40 0.402353576 0.435 0.142 9.39E-136 C1 MAPK6 0.394355852 0.51 0.181 1.75E-135 C1 SNAP23 0.375151258 0.456 0.151 1.81E-135 C1 RALBP1 0.535910442 0.661 0.335 3.37E-135 C1 ROCK1 0.400659168 0.524 0.195 3.91E-135 C1 PI3 0.443705832 0.442 0.128 1.19E-134 C1 PAFAH1B1 0.346104873 0.474 0.158 1.26E-134 C1 RPL36AL 0.522685381 0.851 0.772 4.91E-134 C1 OCIAD2 0.765184948 0.64 0.415 1.31E-133 C1 EFNB2 0.386641173 0.417 0.115 1.33E-133 C1 GFPT1 0.502844669 0.58 0.255 5.08E-132 C1 PTPRK 0.425845035 0.55 0.222 8.40E-132 C1 RIOK3 0.446244287 0.58 0.24 9.25E-132 C1 DAG1 0.412499894 0.464 0.157 1.69E-131 C1 C1GALT1 0.387646316 0.503 0.187 3.63E-131 C1 TNFAIP3 0.759097606 0.439 0.152 4.04E-131 C1 PRRC2C 0.565236553 0.805 0.499 4.68E-131 C1 SH3KBP1 0.339651622 0.447 0.142 5.40E-131 C1 HIST1H1C 0.6331583 0.659 0.328 6.54E-131 C1 SRP72 0.50027758 0.517 0.224 7.64E-131 C1 GLOD4 0.413492486 0.498 0.195 1.92E-130 C1 PLS3 0.293460863 0.359 0.088 5.05E-130 C1 DACH1 0.272274795 0.302 0.055 6.57E-130 C1 IER3 0.768907201 0.766 0.481 9.15E-130 C1 RSRC2 0.521802118 0.68 0.362 9.54E-130 C1 ZMPSTE24 0.331097972 0.417 0.13 1.39E-129 C1 PLIN3 0.420854398 0.503 0.193 3.35E-129 C1 EID1 0.444716124 0.527 0.216 8.77E-129 C1 TRIM27 0.360906409 0.426 0.13 1.27E-128 C1 DENR 0.451125651 0.54 0.233 1.69E-128 C1 RCN2 0.345188668 0.447 0.147 2.20E-128 C1 MYL12B 0.71475841 0.797 0.712 5.33E-128 C1 PTPN2 0.385298416 0.466 0.159 2.84E-127 C1 RCN3 0.276274349 0.299 0.054 5.98E-126 C1 CALR 0.57565338 0.805 0.592 8.22E-126 C1 MECOM 0.450448441 0.538 0.208 9.04E-126 C1 PSMB8 0.534185197 0.713 0.462 9.20E-126 C1 MESDC2 0.468614691 0.575 0.266 9.80E-126 C1 YBX1 0.707984129 0.78 0.634 1.18E-125 C1 FAM3D 0.582569394 0.699 0.404 1.20E-125 C1 IMPA2 0.384484941 0.426 0.139 4.20E-125 C1 ASAH1 0.451619521 0.534 0.234 4.30E-125 C1 IFITM2 0.390762212 0.509 0.197 5.35E-125 C1 KPNA6 0.388170234 0.439 0.146 7.81E-125 C1 ANKRD12 0.503254377 0.627 0.294 8.42E-125 C1

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KRCC1 0.296376737 0.397 0.114 3.25E-124 C1 LSR 0.544942901 0.727 0.475 4.04E-124 C1 GSTT1 0.27533428 0.382 0.104 5.60E-124 C1 TBL1XR1 0.45020291 0.549 0.237 7.17E-124 C1 ALDOA 0.733497316 0.809 0.712 2.74E-123 C1 RPAIN 0.429115491 0.51 0.204 2.90E-123 C1 NCL 0.590393898 0.802 0.537 1.27E-122 C1 NAB1 0.252801422 0.33 0.075 4.26E-122 C1 PDXK 0.403281085 0.542 0.218 6.49E-122 C1 EIF5B 0.522829517 0.819 0.56 7.27E-122 C1 HEXA 0.357859786 0.478 0.171 7.90E-122 C1 ETFA 0.475774613 0.631 0.336 1.02E-121 C1 LEPREL4 0.287785099 0.296 0.056 1.67E-121 C1 TMEM30B 0.279697233 0.431 0.135 1.72E-121 C1 SLC39A7 0.420527158 0.554 0.241 4.61E-121 C1 ARHGAP18 0.333781986 0.435 0.144 8.78E-121 C1 FAM120A 0.496594344 0.635 0.327 1.33E-120 C1 HIST1H2AC 0.479676153 0.541 0.233 2.28E-120 C1 GNL2 0.350086226 0.433 0.144 2.39E-120 C1 APPL2 0.2513356 0.375 0.101 2.64E-120 C1 ZFP36L2 0.539316933 0.821 0.612 3.60E-120 C1 MRPL14 0.5281055 0.668 0.429 5.96E-120 C1 BZW1 0.44056314 0.569 0.263 1.22E-119 C1 TMSB4X 0.584780605 0.975 0.97 1.92E-119 C1 TM7SF3 0.326391197 0.426 0.141 1.94E-119 C1 NCOA7 0.684441969 0.596 0.313 2.02E-119 C1 HSP90AA1 0.596361548 0.862 0.669 4.01E-119 C1 EDEM3 0.371689008 0.473 0.168 4.36E-119 C1 SEPHS2 0.558743315 0.69 0.395 1.51E-118 C1 LPIN2 0.428968338 0.539 0.218 1.57E-118 C1 ARPC2 0.575360769 0.708 0.515 2.19E-118 C1 ANKLE2 0.421261904 0.49 0.183 4.35E-118 C1 SPTBN1 0.541563187 0.715 0.414 5.57E-118 C1 FAM114A1 0.28559889 0.374 0.102 7.99E-118 C1 PIM1 0.361286291 0.371 0.105 1.22E-117 C1 BBX 0.340637859 0.453 0.156 1.25E-117 C1 CEBPD 0.606504655 0.594 0.294 1.79E-117 C1 TINAGL1 0.45948247 0.579 0.267 2.10E-117 C1 GALNT5 0.285661613 0.311 0.066 2.19E-117 C1 CAPZA1 0.440163217 0.573 0.278 2.61E-117 C1 CCDC167 0.353926463 0.444 0.152 2.70E-117 C1 RAD23A 0.465793725 0.632 0.348 3.52E-117 C1 LIPH 0.589476532 0.734 0.438 5.24E-117 C1 RNASET2 0.748229684 0.623 0.366 5.98E-117 C1 CHIC2 0.257503487 0.363 0.1 1.72E-116 C1 CD55 0.66703993 0.613 0.316 1.84E-116 C1 CHMP5 0.513979674 0.575 0.301 2.04E-116 C1 RNF10 0.319477648 0.46 0.166 2.77E-116 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

LINC00998 0.321875357 0.438 0.158 4.87E-116 C1 CXCL16 0.524555832 0.524 0.239 1.36E-115 C1 C9orf3 0.328787408 0.432 0.148 1.65E-115 C1 CKAP4 0.315671239 0.403 0.126 2.49E-115 C1 ITM2C 0.325521913 0.481 0.176 2.99E-115 C1 XBP1 0.498284004 0.683 0.401 3.40E-115 C1 PSMG1 0.275850761 0.355 0.1 4.27E-115 C1 ZG16B 0.521266875 0.45 0.161 5.14E-115 C1 CSDE1 0.465675453 0.604 0.323 8.10E-115 C1 ARPC3 0.685687909 0.657 0.479 1.37E-114 C1 NFKBIE 0.257347474 0.311 0.072 2.74E-114 C1 AP3D1 0.442232065 0.561 0.246 3.18E-114 C1 YOD1 0.309554595 0.324 0.079 7.44E-114 C1 KDELR2 0.548453329 0.689 0.462 1.73E-113 C1 COPB1 0.37146661 0.492 0.193 2.32E-113 C1 FTL 0.700802798 0.961 0.895 2.66E-113 C1 EIF5A 0.60291494 0.744 0.515 4.80E-113 C1 SLC35B3 0.256730253 0.384 0.114 7.46E-113 C1 TRIM2 0.388390482 0.518 0.218 9.13E-113 C1 ECHDC1 0.334897799 0.436 0.159 1.07E-112 C1 NAPG 0.254699818 0.379 0.111 2.23E-112 C1 SFPQ 0.499398643 0.676 0.382 8.65E-112 C1 TTC3 0.450869162 0.623 0.306 3.75E-111 C1 WDR45B 0.492951707 0.651 0.349 4.05E-111 C1 TXNRD1 0.429448106 0.505 0.211 4.25E-111 C1 FXN 0.309137494 0.384 0.126 8.67E-111 C1 HSPE1 0.526719787 0.841 0.647 1.23E-110 C1 COL27A1 0.637098247 0.435 0.157 1.28E-110 C1 XRCC5 0.477680766 0.567 0.292 1.44E-110 C1 ZBTB7A 0.466434249 0.633 0.309 3.57E-110 C1 INO80C 0.319855981 0.428 0.15 8.63E-110 C1 ARL5A 0.307620298 0.465 0.179 9.94E-110 C1 PSMG2 0.41838374 0.512 0.234 9.99E-110 C1 EIF1AX 0.459014867 0.647 0.37 1.39E-109 C1 CREB3 0.296982453 0.411 0.135 1.81E-109 C1 WDR46 0.371170069 0.448 0.166 1.92E-109 C1 CHPF 0.269399775 0.379 0.114 1.27E-108 C1 LITAF 0.332520121 0.47 0.18 1.30E-108 C1 TMEM120B 0.261449881 0.29 0.063 2.15E-108 C1 RBM42 0.396372304 0.532 0.244 3.59E-108 C1 CSNK2B 0.495810853 0.626 0.39 3.61E-108 C1 KLHL23 0.390208221 0.366 0.111 3.89E-108 C1 GOLGA3 0.303296324 0.375 0.111 4.00E-108 C1 TMF1 0.292334101 0.418 0.143 6.44E-108 C1 NUCB2 0.302071083 0.374 0.115 1.05E-107 C1 TNFRSF21 0.384802391 0.425 0.155 2.88E-107 C1 SRP14 0.433040531 0.833 0.721 3.42E-107 C1 ACAT2 0.372902575 0.359 0.112 6.07E-107 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

HNRNPU 0.468324562 0.731 0.469 7.35E-107 C1 SON 0.478735216 0.88 0.654 3.72E-106 C1 ALDH3B1 0.261277209 0.326 0.085 3.78E-106 C1 PSMA4 0.631476514 0.627 0.405 4.19E-106 C1 LPIN1 0.349203231 0.369 0.112 1.03E-105 C1 DHRS7 0.352369107 0.491 0.203 1.23E-104 C1 GJB3 0.308612408 0.342 0.099 1.44E-104 C1 LGALS2 0.473193539 0.53 0.234 3.89E-104 C1 YWHAB 0.469216408 0.749 0.536 4.67E-104 C1 NELFE 0.395861878 0.569 0.278 7.22E-104 C1 TCEAL4 0.259663626 0.339 0.091 7.31E-104 C1 CDC5L 0.335686294 0.487 0.198 9.29E-104 C1 CD2AP 0.407639056 0.608 0.309 1.16E-103 C1 CIB1 0.497568389 0.717 0.549 1.55E-103 C1 PPARG 0.264585079 0.389 0.129 1.83E-103 C1 FOXP1 0.383442211 0.603 0.297 3.75E-103 C1 C12orf57 0.456072095 0.706 0.452 5.87E-103 C1 MRPS21 0.487349561 0.709 0.488 7.29E-103 C1 H3F3A 0.461151774 0.883 0.8 9.06E-103 C1 GCNT3 0.471075437 0.558 0.261 3.32E-102 C1 MLPH 0.395683181 0.604 0.284 3.80E-101 C1 DNAJC3 0.352973024 0.493 0.214 3.87E-101 C1 LAMC2 0.406092579 0.371 0.117 5.51E-101 C1 SEZ6L2 0.295639587 0.396 0.127 6.73E-101 C1 CLCN3 0.343175673 0.472 0.189 1.98E-100 C1 TMEM192 0.254494906 0.304 0.078 2.39E-100 C1 SPAG9 0.406794956 0.508 0.212 5.53E-100 C1 PPP1R15B 0.439515184 0.499 0.212 8.65E-100 C1 RBBP4 0.403351564 0.583 0.282 1.08E-99 C1 MANF 0.4187993 0.564 0.277 1.95E-99 C1 TMEM106B 0.298678139 0.413 0.15 2.99E-99 C1 SH3RF1 0.254289086 0.383 0.124 3.27E-99 C1 EMC6 0.332547767 0.464 0.2 3.86E-99 C1 NFIB 0.362037456 0.518 0.23 4.23E-99 C1 NEDD9 0.336403377 0.435 0.163 4.57E-99 C1 SET 0.446236112 0.767 0.501 5.13E-99 C1 ITGAV 0.27056724 0.339 0.098 5.47E-99 C1 CLIP1 0.292223604 0.405 0.14 6.06E-99 C1 SYAP1 0.405251109 0.574 0.299 1.52E-98 C1 SPAG7 0.355300697 0.502 0.228 2.23E-98 C1 TPM1 0.428992476 0.839 0.675 2.30E-98 C1 ZNF75A 0.278689248 0.274 0.062 5.47E-98 C1 SNX3 0.468544024 0.579 0.341 8.20E-98 C1 INSIG1 0.528739465 0.442 0.187 9.19E-98 C1 LSM12 0.309772505 0.46 0.19 1.23E-97 C1 ESCO1 0.259583256 0.354 0.106 1.33E-97 C1 COX6A1 0.499494361 0.794 0.717 4.91E-97 C1 MARCKSL1 0.539183834 0.675 0.458 6.42E-97 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

TRIP6 0.378122503 0.509 0.236 9.68E-97 C1 EIF3J 0.484400854 0.825 0.566 2.57E-96 C1 PRPF40A 0.392191972 0.587 0.311 4.17E-96 C1 VPS37B 0.366760984 0.537 0.25 4.87E-96 C1 TMCO1 0.456561128 0.703 0.455 5.03E-96 C1 MAP3K13 0.465189331 0.609 0.35 6.98E-96 C1 ALDH2 0.549300713 0.595 0.38 1.68E-95 C1 GOLGB1 0.437977941 0.694 0.407 2.14E-95 C1 TRMT112 0.450423919 0.669 0.436 3.47E-95 C1 DDX18 0.458542147 0.677 0.397 4.60E-95 C1 SNRPC 0.408463591 0.531 0.275 3.42E-94 C1 HIF1A 0.293827024 0.381 0.132 3.71E-94 C1 KHDRBS1 0.37647458 0.572 0.293 4.01E-94 C1 ITM2B 0.516794496 0.745 0.598 4.31E-94 C1 GALK2 0.262511919 0.382 0.133 9.45E-94 C1 RIPK2 0.271111902 0.346 0.111 2.29E-93 C1 FLOT1 0.33089046 0.496 0.226 2.41E-93 C1 FXYD3 0.632719816 0.813 0.741 3.72E-93 C1 MRPL3 0.382347486 0.492 0.235 5.60E-93 C1 SLPI 0.355248513 0.565 0.272 6.87E-93 C1 MMADHC 0.368826821 0.484 0.227 6.93E-93 C1 COX6B1 0.32364377 0.926 0.874 7.10E-93 C1 ENOSF1 0.335974223 0.488 0.207 1.04E-92 C1 LAPTM4B 0.357980361 0.517 0.245 1.06E-92 C1 HDAC1 0.396930024 0.579 0.31 1.52E-92 C1 ANP32A 0.388055213 0.545 0.28 1.71E-92 C1 HLA-A 0.346102461 0.963 0.913 2.32E-92 C1 UBE2R2 0.26984292 0.432 0.172 2.58E-92 C1 CLTA 0.456969461 0.664 0.461 3.17E-92 C1 LRRC1 0.253152173 0.405 0.147 4.29E-92 C1 TMBIM1 0.436471986 0.623 0.353 5.76E-92 C1 ADSS 0.284933812 0.423 0.168 1.13E-91 C1 KARS 0.364610044 0.514 0.25 1.48E-91 C1 HNRNPK 0.437831649 0.744 0.516 2.42E-91 C1 HMGCS2 0.629744249 0.453 0.194 2.88E-91 C1 ARF1 0.424225272 0.737 0.494 3.77E-91 C1 ARL6IP5 0.387649374 0.55 0.284 4.68E-91 C1 FH 0.259751452 0.382 0.142 5.08E-91 C1 FOXO3 0.30970541 0.414 0.157 5.51E-91 C1 LMO4 0.424572091 0.617 0.312 6.01E-91 C1 RHOB 0.489849727 0.652 0.371 9.08E-91 C1 HNRNPH2 0.29764662 0.446 0.187 1.70E-90 C1 EIF2S1 0.290760235 0.422 0.171 2.39E-90 C1 ITGB8 0.304648835 0.283 0.073 3.98E-90 C1 RFK 0.320527976 0.447 0.192 4.33E-90 C1 MAP2K3 0.33050306 0.504 0.226 6.15E-90 C1 PGRMC1 0.387755312 0.56 0.29 6.70E-90 C1 SMARCC1 0.360992034 0.508 0.232 6.85E-90 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

SAT1 0.638046633 0.925 0.828 1.39E-89 C1 44083 0.337151381 0.544 0.266 1.79E-89 C1 CSRP1 0.265093322 0.415 0.158 2.13E-89 C1 DHX15 0.318000312 0.488 0.217 3.07E-89 C1 HNRNPC 0.440949814 0.683 0.47 3.97E-89 C1 LSM2 0.3821482 0.473 0.231 4.01E-89 C1 ETNK1 0.323536073 0.572 0.285 4.37E-89 C1 WNK1 0.269621398 0.382 0.137 7.90E-89 C1 HSD17B2 0.335846986 0.505 0.225 8.54E-89 C1 DYNLT1 0.437052177 0.598 0.373 9.95E-89 C1 GCC2 0.413962092 0.64 0.362 1.46E-88 C1 THOC2 0.388411116 0.594 0.313 2.86E-88 C1 BRI3BP 0.397181017 0.454 0.198 5.44E-88 C1 GALNT1 0.256776905 0.381 0.133 6.76E-88 C1 GNPNAT1 0.27706089 0.392 0.149 7.87E-88 C1 NTPCR 0.261235427 0.392 0.15 1.58E-87 C1 ESYT2 0.267775118 0.361 0.126 1.76E-87 C1 EIF2S2 0.42391114 0.773 0.542 2.15E-87 C1 SSFA2 0.320381179 0.486 0.217 2.47E-87 C1 SNRPA1 0.376139771 0.506 0.25 2.57E-87 C1 SERPINH1 0.271273624 0.423 0.167 2.66E-87 C1 TAF11 0.282140533 0.455 0.19 5.15E-87 C1 CPSF6 0.310833672 0.431 0.178 5.23E-87 C1 EZR 0.439895287 0.777 0.592 1.18E-86 C1 GLO1 0.35808622 0.502 0.249 1.53E-86 C1 PRSS22 0.352382508 0.403 0.157 2.21E-86 C1 UQCC2 0.395151795 0.591 0.319 2.40E-86 C1 ACTG1 0.519140049 0.9 0.852 4.23E-86 C1 EBPL 0.312734604 0.473 0.205 9.80E-86 C1 TIPARP 0.277626547 0.439 0.183 1.44E-85 C1 MEAF6 0.314510177 0.475 0.215 1.81E-85 C1 NFKBIA 0.748396396 0.767 0.582 2.28E-85 C1 SMS 0.385762295 0.537 0.288 2.37E-85 C1 PSMA1 0.405776122 0.578 0.335 2.37E-85 C1 TMA16 0.344119402 0.485 0.22 2.43E-85 C1 GADD45GIP1 0.44797795 0.789 0.551 2.75E-85 C1 ARF4 0.455123102 0.595 0.38 3.76E-85 C1 SOD2 0.457085682 0.575 0.32 4.38E-85 C1 DNAJB6 0.39638394 0.578 0.319 5.55E-85 C1 PRRG4 0.264521927 0.347 0.116 5.99E-85 C1 EIF4A1 0.478270029 0.778 0.644 1.03E-84 C1 C11orf58 0.379735369 0.611 0.347 2.53E-84 C1 NUCKS1 0.504338129 0.696 0.437 3.41E-84 C1 PSMD7 0.426018665 0.581 0.339 4.39E-84 C1 GIPC1 0.337520703 0.522 0.261 6.18E-84 C1 COPB2 0.297750782 0.478 0.22 6.32E-84 C1 HLA-E 0.445217899 0.811 0.653 6.57E-84 C1 PTTG1IP 0.347130676 0.545 0.275 2.27E-83 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

LGALS4 0.750779613 0.839 0.802 2.44E-83 C1 AHSA1 0.3436009 0.485 0.234 2.90E-83 C1 SMARCA5 0.254273239 0.406 0.161 3.57E-83 C1 CTSH 0.410233928 0.552 0.305 8.78E-83 C1 TGIF1 0.385703663 0.514 0.256 9.15E-83 C1 VPS29 0.416598839 0.569 0.334 1.03E-82 C1 SFT2D1 0.396136063 0.536 0.302 1.20E-82 C1 CDC42BPA 0.292669514 0.528 0.242 1.32E-82 C1 KRT10 0.333126838 0.552 0.278 2.86E-82 C1 PRDX1 0.409922695 0.779 0.596 3.66E-82 C1 WEE1 0.295037607 0.403 0.159 3.96E-82 C1 SOX9 0.404494926 0.558 0.29 4.16E-82 C1 LGALS3BP 0.330522109 0.876 0.701 4.24E-82 C1 SLC43A1 0.318718116 0.373 0.14 3.19E-81 C1 CNOT7 0.253312482 0.43 0.18 4.36E-81 C1 MZT2B 0.415020404 0.725 0.518 1.30E-80 C1 PPCS 0.336081393 0.532 0.284 1.41E-80 C1 PSMA5 0.419205549 0.537 0.31 1.72E-80 C1 ARID4B 0.333372741 0.549 0.277 2.38E-80 C1 ANAPC5 0.310148909 0.501 0.244 4.26E-80 C1 DARS 0.287640525 0.463 0.216 4.49E-80 C1 SSB 0.311210207 0.602 0.324 5.71E-80 C1 CCT3 0.419468723 0.623 0.386 1.37E-79 C1 RAD21 0.375068638 0.573 0.299 2.10E-79 C1 SPR 0.251746291 0.438 0.183 2.66E-79 C1 EHF 0.278778075 0.476 0.218 3.18E-79 C1 MIDN 0.421812607 0.612 0.345 3.26E-79 C1 PERP 0.476866692 0.672 0.509 4.44E-79 C1 ZBTB43 0.32257658 0.402 0.166 7.47E-79 C1 COTL1 0.381186901 0.576 0.332 1.19E-78 C1 TAF7 0.372834142 0.602 0.328 1.73E-78 C1 TACSTD2 0.564088437 0.627 0.394 2.53E-78 C1 PSMB5 0.417422153 0.525 0.297 2.71E-78 C1 LRRC59 0.317918892 0.515 0.269 4.20E-78 C1 RAB2A 0.390680495 0.653 0.422 5.07E-78 C1 ANP32E 0.33150136 0.431 0.186 5.80E-78 C1 BHLHE41 0.260841417 0.342 0.121 8.90E-78 C1 HRSP12 0.258539214 0.434 0.194 9.35E-78 C1 FABP5 0.40662257 0.589 0.34 1.01E-77 C1 PLAC8 0.426222289 0.576 0.315 1.54E-77 C1 NFE2L2 0.351424743 0.596 0.335 2.28E-77 C1 UTP11L 0.282501205 0.406 0.173 2.29E-77 C1 MRPS11 0.280859148 0.479 0.231 2.45E-77 C1 PSMD14 0.313213335 0.54 0.282 3.06E-77 C1 DSG2 0.328449367 0.601 0.32 3.13E-77 C1 YIPF4 0.325319553 0.507 0.253 3.41E-77 C1 HMGN1 0.385741423 0.774 0.578 3.58E-77 C1 BRD2 0.368234488 0.687 0.42 3.60E-77 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

TFG 0.346626446 0.54 0.302 4.24E-77 C1 ACTR3 0.319211099 0.541 0.294 4.55E-77 C1 SF3B2 0.367719526 0.633 0.38 4.74E-77 C1 CHD2 0.36453728 0.556 0.286 5.66E-77 C1 HSPD1 0.419680843 0.679 0.443 1.82E-76 C1 GNL3 0.386242581 0.595 0.337 2.34E-76 C1 EIF4E2 0.284715351 0.491 0.25 2.70E-76 C1 FUT6 0.323529962 0.314 0.103 3.06E-76 C1 CTSS 0.396687921 0.638 0.396 5.00E-76 C1 TOR1AIP2 0.280351329 0.48 0.223 1.35E-75 C1 LAMA3 0.381260476 0.392 0.156 1.39E-75 C1 MRPS35 0.346938246 0.497 0.262 1.44E-75 C1 PLEKHA5 0.265240709 0.432 0.18 2.10E-75 C1 GTF2H5 0.293806613 0.498 0.253 4.06E-75 C1 STAU1 0.278946116 0.514 0.263 5.90E-75 C1 TCP1 0.339287265 0.506 0.268 8.91E-75 C1 PRDX2 0.358898007 0.67 0.425 9.73E-75 C1 CCDC57 0.263603296 0.413 0.169 9.76E-75 C1 FXYD5 0.344436685 0.532 0.273 9.90E-75 C1 CXCL1 0.650670363 0.459 0.221 1.12E-74 C1 EIF3M 0.360943486 0.529 0.294 1.22E-74 C1 SH3YL1 0.347261014 0.538 0.304 1.66E-74 C1 IL8 0.812504337 0.388 0.171 1.97E-74 C1 GTF3C6 0.328289539 0.511 0.271 2.37E-74 C1 TMEM147 0.378106508 0.576 0.344 4.98E-74 C1 LARP1B 0.326019238 0.442 0.196 8.40E-74 C1 DDR1 0.326488822 0.543 0.279 8.91E-74 C1 PLAUR 0.563273026 0.535 0.287 2.68E-73 C1 NDUFB9 0.365186933 0.78 0.596 3.66E-73 C1 CPNE3 0.303685193 0.484 0.239 3.86E-73 C1 CCDC47 0.332710183 0.524 0.274 3.98E-73 C1 MYADM 0.252210126 0.391 0.16 4.30E-73 C1 LGR4 0.256333742 0.384 0.154 5.33E-73 C1 CCL20 0.89643998 0.348 0.138 6.34E-73 C1 ANG 0.250448834 0.4 0.168 6.99E-73 C1 GATA6 0.26898908 0.41 0.177 1.43E-72 C1 PSMC4 0.331260902 0.551 0.311 1.51E-72 C1 HMG20B 0.281257133 0.466 0.219 1.74E-72 C1 TOB1 0.345056648 0.606 0.349 4.46E-72 C1 PPP1R15A 0.61381414 0.798 0.614 5.98E-72 C1 WDR43 0.325272552 0.506 0.256 8.41E-72 C1 ITPKC 0.369967195 0.348 0.132 9.59E-72 C1 ACTN1 0.264601156 0.458 0.215 1.90E-71 C1 TRIB1 0.486366096 0.522 0.288 2.60E-71 C1 SRSF3 0.402535625 0.692 0.477 3.65E-71 C1 AK2 0.324895693 0.52 0.286 4.25E-71 C1 MGLL 0.305449087 0.56 0.301 5.35E-71 C1 C20orf24 0.343142353 0.562 0.326 5.35E-71 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

CAPG 0.357879366 0.602 0.364 1.83E-70 C1 CD59 0.329369147 0.605 0.365 2.62E-70 C1 MARCKS 0.362316277 0.663 0.396 5.39E-70 C1 MLEC 0.382204262 0.706 0.456 1.30E-69 C1 KIAA0319L 0.308443838 0.378 0.153 1.54E-69 C1 ERLEC1 0.300970215 0.452 0.222 2.82E-69 C1 ATF3 0.432157135 0.655 0.418 3.20E-69 C1 MRPS18A 0.285762915 0.506 0.262 4.37E-69 C1 STXBP2 0.304914785 0.569 0.31 6.22E-69 C1 TPD52 0.368150978 0.698 0.486 9.55E-69 C1 U2AF1 0.376374673 0.603 0.398 1.01E-68 C1 AGR3 0.566445825 0.708 0.575 1.34E-68 C1 PLSCR1 0.309712915 0.522 0.275 2.22E-68 C1 MRPS10 0.265646093 0.43 0.205 2.25E-68 C1 TMEM87A 0.266198571 0.482 0.24 2.56E-68 C1 SNF8 0.302380666 0.522 0.288 3.09E-68 C1 BRD4 0.357839929 0.53 0.274 3.65E-68 C1 CPNE1 0.278812363 0.484 0.251 4.30E-68 C1 FRG1 0.251712064 0.459 0.217 4.41E-68 C1 LSMD1 0.313645002 0.631 0.39 6.52E-68 C1 WDR1 0.296474803 0.551 0.303 9.26E-68 C1 BBC3 0.300526186 0.401 0.173 1.54E-67 C1 SEC62 0.384109485 0.671 0.461 1.72E-67 C1 WTAP 0.255942215 0.433 0.203 1.73E-67 C1 YWHAZ 0.362783068 0.779 0.612 2.61E-67 C1 PARD6B 0.262011276 0.411 0.184 3.49E-67 C1 ZNRD1 0.281449808 0.471 0.242 6.01E-67 C1 UNC45A 0.259371283 0.337 0.13 1.34E-66 C1 IGF2BP2 0.257781607 0.431 0.195 1.36E-66 C1 MTCH1 0.298070859 0.528 0.292 1.66E-66 C1 BPTF 0.315142056 0.491 0.246 2.02E-66 C1 LMAN1 0.284884456 0.475 0.247 2.29E-66 C1 RAD23B 0.261238435 0.459 0.224 4.55E-66 C1 COX5A 0.417150553 0.728 0.616 6.60E-66 C1 TXNDC17 0.352471798 0.739 0.57 6.79E-66 C1 KTN1 0.344066702 0.708 0.466 8.18E-66 C1 S100A11 0.311717958 0.912 0.839 2.38E-65 C1 44076 0.255098518 0.516 0.278 3.44E-65 C1 CCT4 0.312421383 0.533 0.293 3.48E-65 C1 COPA 0.277837587 0.477 0.237 6.23E-65 C1 UBXN4 0.339546617 0.655 0.433 9.74E-65 C1 EIF4G2 0.332686257 0.655 0.442 1.06E-64 C1 CEBPZ 0.322121965 0.485 0.246 1.13E-64 C1 LAD1 0.329231797 0.562 0.332 1.27E-64 C1 SEC11A 0.341222009 0.563 0.342 1.29E-64 C1 CD97 0.265428259 0.405 0.18 1.53E-64 C1 PYCR1 0.302381583 0.445 0.217 2.06E-64 C1 MRPL13 0.325379769 0.516 0.289 3.97E-64 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

PRDX4 0.326485404 0.496 0.272 5.31E-64 C1 CHP1 0.323632637 0.522 0.291 5.83E-64 C1 ARL6IP4 0.35948436 0.812 0.648 7.06E-64 C1 IMP3 0.328370622 0.532 0.302 1.08E-63 C1 SUMO2 0.444052612 0.631 0.47 1.27E-63 C1 VARS 0.353930227 0.426 0.2 1.42E-63 C1 TARSL2 0.30445702 0.314 0.117 1.57E-63 C1 U2SURP 0.325377967 0.603 0.359 1.61E-63 C1 IQGAP1 0.294378009 0.601 0.349 5.51E-63 C1 KLF4 0.393835081 0.623 0.397 7.07E-63 C1 WHSC1L1 0.281765167 0.535 0.279 7.76E-63 C1 SUMO3 0.259632313 0.491 0.263 1.77E-62 C1 C11orf31 0.331737089 0.775 0.615 2.48E-62 C1 CHMP2B 0.275327936 0.535 0.297 4.23E-62 C1 SLTM 0.311001709 0.581 0.341 4.25E-62 C1 MUC12 0.326442379 0.367 0.155 8.41E-62 C1 YIPF3 0.27545837 0.516 0.29 1.11E-61 C1 NCOR2 0.255631461 0.347 0.142 1.44E-61 C1 NDUFS5 0.348802351 0.781 0.679 1.72E-61 C1 FDPS 0.427585187 0.592 0.378 2.24E-61 C1 VCP 0.292104825 0.562 0.322 8.57E-61 C1 NDUFC1 0.35291248 0.634 0.458 1.10E-60 C1 RBBP6 0.292996436 0.486 0.25 1.18E-60 C1 MTCH2 0.285374785 0.475 0.258 1.35E-60 C1 NDUFA13 0.278589471 0.918 0.823 2.73E-60 C1 GCN1L1 0.264799735 0.27 0.094 2.75E-60 C1 STOML2 0.324207697 0.556 0.352 3.33E-60 C1 PSMD8 0.345872094 0.594 0.395 3.60E-60 C1 ASS1 0.370174274 0.541 0.303 9.90E-60 C1 IRF2BP2 0.330209422 0.566 0.322 1.66E-59 C1 AUP1 0.30142915 0.643 0.407 4.38E-59 C1 HSPA1A 0.427442404 0.599 0.363 9.09E-59 C1 PARP1 0.31579645 0.534 0.298 9.96E-59 C1 TRMT10C 0.251377218 0.434 0.212 1.05E-58 C1 NR4A2 0.268842962 0.375 0.168 1.22E-58 C1 ANKRD11 0.397054907 0.66 0.405 1.27E-58 C1 BZW2 0.264552985 0.474 0.251 1.51E-58 C1 LDHA 0.473488032 0.63 0.467 2.07E-58 C1 GDF15 0.567113481 0.533 0.313 2.17E-58 C1 NOP10 0.390246055 0.613 0.462 2.53E-58 C1 PCBP1 0.325094659 0.687 0.483 3.96E-58 C1 MPLKIP 0.253830835 0.483 0.262 8.11E-58 C1 TCF25 0.364677926 0.793 0.564 8.33E-58 C1 HIST1H4C 0.550684391 0.712 0.478 8.43E-58 C1 PPP2R1A 0.303964584 0.585 0.362 9.47E-58 C1 BAG1 0.279408652 0.551 0.319 9.82E-58 C1 ILF3 0.351038098 0.612 0.368 1.38E-57 C1 KDELR1 0.314477311 0.584 0.384 5.08E-57 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

ASPH 0.251234537 0.571 0.324 6.94E-57 C1 NANS 0.361000531 0.576 0.384 8.03E-57 C1 ERO1L 0.304515025 0.435 0.216 1.35E-56 C1 RBM25 0.31393376 0.674 0.437 3.02E-56 C1 CHMP2A 0.305552848 0.687 0.534 3.35E-56 C1 VPS35 0.266813827 0.523 0.301 4.34E-56 C1 CLU 0.289620606 0.506 0.272 9.58E-56 C1 EFNA1 0.377150297 0.559 0.341 9.77E-56 C1 LAPTM4A 0.381241444 0.554 0.363 1.18E-55 C1 RPN2 0.301297663 0.582 0.358 1.25E-55 C1 PGK1 0.387103945 0.582 0.382 1.72E-55 C1 ASL 0.31522707 0.705 0.485 2.91E-55 C1 BLVRB 0.310903035 0.717 0.548 5.82E-55 C1 OCIAD1 0.26480709 0.52 0.3 1.24E-54 C1 HERPUD1 0.376906018 0.583 0.376 1.48E-54 C1 BCLAF1 0.273251875 0.539 0.304 1.74E-54 C1 SOD1 0.339651669 0.795 0.713 1.99E-54 C1 ZC3H12A 0.311503906 0.431 0.222 3.16E-54 C1 NOP56 0.37541982 0.613 0.38 4.23E-54 C1 ANAPC11 0.347047009 0.626 0.442 4.70E-54 C1 PSMC5 0.265336155 0.512 0.302 6.98E-54 C1 OSTC 0.308063497 0.519 0.315 7.85E-54 C1 ENSA 0.290883313 0.599 0.394 1.19E-53 C1 NR2F6 0.251199674 0.444 0.22 2.50E-53 C1 GSTP1 0.261595371 0.926 0.841 6.09E-53 C1 JTB 0.342137426 0.652 0.488 6.13E-53 C1 SUMO1 0.258442868 0.551 0.328 9.54E-53 C1 HOOK2 0.353061225 0.67 0.426 2.68E-52 C1 SBDS 0.306733492 0.615 0.425 3.08E-52 C1 CD164 0.328793798 0.624 0.44 4.55E-52 C1 GPS1 0.250944944 0.42 0.209 4.71E-52 C1 CHCHD2 0.333313691 0.822 0.767 4.72E-52 C1 CDH1 0.286494784 0.608 0.376 8.10E-52 C1 PRDX6 0.307865292 0.553 0.371 9.02E-52 C1 NMT1 0.340511153 0.635 0.392 1.12E-51 C1 YIF1A 0.289175964 0.526 0.324 1.13E-51 C1 DNAJB1 0.324045211 0.56 0.345 1.19E-51 C1 DDX5 0.347532158 0.734 0.631 1.34E-51 C1 ABHD2 0.267108577 0.54 0.306 1.39E-51 C1 TSTA3 0.312190346 0.722 0.545 1.76E-51 C1 RNF145 0.268024914 0.575 0.329 1.79E-51 C1 ERICH1 0.279759725 0.49 0.257 2.10E-51 C1 ATP5F1 0.314683799 0.589 0.39 3.16E-51 C1 VMP1 0.307745298 0.712 0.515 6.15E-51 C1 SERP1 0.346275428 0.647 0.495 6.72E-51 C1 PSMB1 0.336755104 0.609 0.437 7.27E-51 C1 EIF3G 0.318414628 0.674 0.493 8.27E-51 C1 PSMC3 0.290271748 0.61 0.379 1.27E-50 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

TMED10 0.264107977 0.576 0.358 2.34E-50 C1 CLNS1A 0.269871678 0.473 0.268 4.94E-50 C1 CCT6A 0.293603103 0.575 0.366 2.00E-49 C1 RAC1 0.359537129 0.754 0.674 2.42E-49 C1 NAA10 0.252112607 0.52 0.315 4.12E-49 C1 ZC3H13 0.266976764 0.444 0.235 6.75E-49 C1 SRRM2 0.311078573 0.745 0.551 7.22E-49 C1 FASN 0.291900595 0.361 0.174 2.02E-48 C1 GOLM1 0.327879126 0.681 0.487 2.13E-48 C1 TMEM14B 0.275274838 0.53 0.333 2.89E-48 C1 MRPL55 0.267728669 0.547 0.336 3.12E-48 C1 C8orf33 0.250732522 0.526 0.306 3.17E-48 C1 NQO1 0.339895013 0.668 0.513 6.58E-48 C1 CACYBP 0.250477364 0.485 0.277 7.59E-48 C1 AHI1 0.300693643 0.574 0.327 8.15E-48 C1 CNBP 0.28745932 0.573 0.368 9.89E-48 C1 AK1 0.253635238 0.559 0.358 1.07E-47 C1 CXCL3 0.557664426 0.58 0.384 1.09E-47 C1 ERH 0.313810438 0.574 0.387 1.11E-47 C1 TUBB2A 0.278534842 0.533 0.318 1.40E-47 C1 S100A16 0.317103381 0.642 0.472 5.19E-47 C1 MT1X 0.583654497 0.734 0.577 7.91E-47 C1 CHURC1 0.264273151 0.551 0.351 2.14E-46 C1 PPP4C 0.273925284 0.622 0.424 2.16E-46 C1 EIF4G1 0.294909173 0.59 0.362 3.71E-46 C1 PRPF38B 0.288429953 0.566 0.345 6.67E-46 C1 PEBP1 0.28604744 0.745 0.613 8.88E-46 C1 SLIRP 0.341316081 0.696 0.566 1.71E-45 C1 SPCS2 0.271161922 0.593 0.389 3.72E-45 C1 ATRX 0.259412476 0.569 0.337 4.96E-45 C1 SNRPE 0.316500156 0.612 0.428 9.12E-45 C1 DNMT1 0.269114943 0.334 0.16 1.05E-44 C1 LAMB3 0.339828692 0.541 0.335 1.35E-44 C1 KNOP1 0.324008312 0.551 0.333 1.96E-44 C1 KIAA0101 0.491741121 0.33 0.163 4.77E-44 C1 CDC37 0.268805797 0.676 0.481 8.08E-44 C1 C19orf10 0.280745039 0.556 0.373 1.88E-43 C1 PDXDC1 0.265239116 0.606 0.384 2.02E-43 C1 FHL2 0.344909953 0.451 0.263 8.12E-43 C1 QARS 0.260514756 0.589 0.373 1.06E-42 C1 TAX1BP1 0.273494456 0.635 0.445 1.11E-42 C1 PILRB 0.25471945 0.382 0.192 2.17E-42 C1 POLR2I 0.256971172 0.591 0.404 2.34E-42 C1 EIF4A2 0.282390325 0.694 0.564 3.85E-42 C1 PSMB7 0.252387471 0.594 0.39 3.89E-42 C1 NME1 0.301616009 0.527 0.345 5.09E-42 C1 TMPRSS2 0.264787354 0.449 0.251 5.41E-42 C1 WDR60 0.332638285 0.474 0.267 6.56E-42 C1

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

EIF3F 0.301170657 0.567 0.39 8.32E-42 C1 VIMP 0.267732125 0.662 0.473 1.03E-41 C1 NDUFS2 0.255001441 0.583 0.392 1.20E-41 C1 HN1 0.322087902 0.697 0.588 2.51E-41 C1 JUND 0.310917908 0.755 0.531 3.06E-41 C1 ANKRD36 0.255864719 0.366 0.183 3.27E-41 C1 IDH2 0.27344544 0.559 0.374 2.28E-40 C1 SPRY1 0.301712879 0.328 0.165 3.57E-40 C1 C1orf35 0.317899221 0.496 0.295 3.82E-40 C1 PPP1CA 0.263115937 0.62 0.439 4.25E-40 C1 TIMM13 0.281950079 0.698 0.534 1.54E-39 C1 AKR1B10 0.275648584 0.52 0.327 1.54E-39 C1 ANXA4 0.279833009 0.658 0.497 6.14E-38 C1 SPINT2 0.29692554 0.704 0.631 1.14E-37 C1 NPC2 0.306178136 0.612 0.464 2.17E-37 C1 NDUFS8 0.250703406 0.689 0.51 3.38E-37 C1 HSPA1B 0.292538717 0.524 0.321 5.29E-37 C1 FBL 0.270680085 0.633 0.431 1.29E-36 C1 GAPDH 0.268512677 0.937 0.906 2.82E-36 C1 CXCL2 0.38921648 0.427 0.252 1.96E-35 C1 DYNLL1 0.290536336 0.734 0.663 2.39E-35 C1 LAMTOR5 0.260252516 0.577 0.429 2.94E-35 C1 TAPBP 0.259775861 0.644 0.432 1.84E-34 C1 HNRNPM 0.253892686 0.638 0.444 5.56E-34 C1 HERC2 0.293499428 0.405 0.231 1.19E-33 C1 ZFP36L1 0.31069548 0.714 0.551 2.75E-32 C1 NDUFB4 0.253107315 0.652 0.548 1.63E-30 C1 PHB 0.250041564 0.605 0.44 1.73E-28 C1 ARPC1B 0.270519526 0.636 0.52 2.72E-28 C1 TSPAN8 0.359692092 0.803 0.779 1.86E-23 C1 NBEAL2 0.291608796 0.257 0.139 6.78E-23 C1 LMO7 0.328187402 0.58 0.444 3.63E-22 C1 TSPAN1 0.266725041 0.613 0.477 8.89E-22 C1 HMGB2 0.255985764 0.378 0.254 2.19E-15 C1 APOA1 4.119028234 0.753 0.097 0.00E+00 C2 APOA4 3.476310681 0.481 0.036 0.00E+00 C2 APOC3 3.141154181 0.464 0.034 0.00E+00 C2 PRAP1 2.984302811 0.964 0.51 0.00E+00 C2 PHGR1 2.852404194 1 0.712 0.00E+00 C2 FABP1 2.783612025 0.949 0.349 0.00E+00 C2 ALDOB 2.726006972 0.884 0.218 0.00E+00 C2 ANPEP 2.377622589 0.937 0.28 0.00E+00 C2 FABP2 2.271238825 0.687 0.125 0.00E+00 C2 CA1 2.149690616 0.562 0.024 0.00E+00 C2 CDHR5 2.057581726 0.924 0.191 0.00E+00 C2 C19orf77 1.925292729 0.933 0.521 0.00E+00 C2 RP11-59E19.1 1.582515533 0.497 0.027 0.00E+00 C2 C11orf86 1.470350835 0.561 0.042 0.00E+00 C2

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

CDKN2B-AS1 1.389170381 0.455 0.008 0.00E+00 C2 KRT20 1.387379272 0.671 0.106 0.00E+00 C2 CYP3A4 1.354563394 0.413 0.014 0.00E+00 C2 TMPRSS15 1.288040195 0.416 0.013 0.00E+00 C2 APOB 1.199795094 0.34 0.007 0.00E+00 C2 SLC6A19 0.992170074 0.366 0.015 2.17E-288 C2 ZG16 1.075771788 0.371 0.017 5.03E-284 C2 SULT1A2 1.185276746 0.49 0.067 1.55E-249 C2 CDHR2 1.281146265 0.591 0.116 2.81E-244 C2 IFI27 1.367618043 0.979 0.811 2.11E-239 C2 HRASLS2 1.598752776 0.599 0.138 3.16E-235 C2 HPGD 1.229985501 0.579 0.118 8.47E-232 C2 ACE2 0.969627358 0.343 0.024 8.75E-227 C2 ADIRF 2.092901514 0.876 0.569 5.83E-225 C2 CREB3L3 0.787344275 0.307 0.017 7.01E-219 C2 TTC36 0.816809554 0.318 0.019 7.62E-219 C2 LINC00035 1.172232824 0.539 0.108 5.70E-217 C2 MYO15B 1.233159766 0.64 0.171 1.25E-213 C2 GUCA2B 1.26813611 0.329 0.025 2.23E-209 C2 S100A6 0.876343941 1 0.991 7.53E-207 C2 MDK 1.323395753 0.886 0.534 2.43E-200 C2 MYL6 0.891730907 0.983 0.865 9.63E-195 C2 C19orf33 0.978821529 0.977 0.873 4.37E-188 C2 SI 1.21302966 0.466 0.087 8.11E-186 C2 RARRES3 1.356309884 0.64 0.219 1.69E-184 C2 MTTP 0.71181252 0.266 0.017 2.99E-176 C2 CST3 0.965190719 0.952 0.827 1.45E-175 C2 CYP2D6 0.705923696 0.256 0.016 4.69E-172 C2 RBP2 2.026546719 0.401 0.069 1.11E-166 C2 PDZD3 0.834517392 0.364 0.051 5.44E-166 C2 SLC15A1 1.012180079 0.287 0.027 4.27E-163 C2 IL32 1.264576729 0.864 0.6 1.81E-159 C2 ISG15 1.579368348 0.76 0.435 7.95E-154 C2 ESPN 0.99129035 0.461 0.109 4.37E-153 C2 MEP1A 0.876640227 0.371 0.062 1.31E-152 C2 IGJ 1.051697484 0.815 0.451 1.73E-152 C2 SEPP1 1.434476794 0.72 0.381 1.15E-151 C2 RP11-462G2.1 0.907476422 0.278 0.028 2.04E-147 C2 TM4SF5 1.28889594 0.741 0.438 9.74E-147 C2 BLOC1S1 1.015203291 0.829 0.626 2.44E-139 C2 SULT1A1 0.925314999 0.453 0.115 3.71E-139 C2 FAM132A 0.892705724 0.384 0.077 1.98E-138 C2 CRIP1 1.292906754 0.782 0.452 1.78E-137 C2 TM6SF2 0.663720689 0.291 0.041 1.99E-127 C2 CIDEB 0.706936387 0.314 0.052 8.07E-126 C2 TM4SF20 1.154851496 0.632 0.279 7.93E-125 C2 POLD4 1.070840637 0.764 0.548 9.69E-125 C2 AOC1 1.134991045 0.7 0.413 5.73E-121 C2

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

SMIM22 0.717877327 0.906 0.818 2.84E-119 C2 C2orf88 0.773893233 0.324 0.062 2.84E-117 C2 HLA-A 0.760192325 0.985 0.922 6.83E-113 C2 EDF1 0.638601134 0.944 0.863 1.47E-111 C2 MT2A 1.181408889 0.872 0.691 5.17E-111 C2 VAMP8 0.999176384 0.744 0.541 1.13E-109 C2 CYB5A 1.226072823 0.683 0.471 1.36E-107 C2 PIGR 0.971249481 0.927 0.69 6.28E-107 C2 LINC01133 1.014287967 0.631 0.33 9.97E-103 C2 FTH1 0.687074783 0.993 0.93 2.25E-102 C2 CES2 0.894051879 0.784 0.571 3.27E-102 C2 MS4A8 0.702280454 0.289 0.055 3.90E-101 C2 LEAP2 0.777327933 0.266 0.047 8.57E-100 C2 CTSD 0.869769147 0.778 0.592 4.00E-99 C2 RHOC 0.935828559 0.713 0.499 3.59E-96 C2 FXYD3 0.672920269 0.933 0.74 3.23E-95 C2 TM4SF4 0.86220058 0.479 0.173 5.83E-93 C2 ANKRD9 0.750726231 0.339 0.086 8.82E-93 C2 ATOX1 0.996892339 0.679 0.48 1.34E-92 C2 PRSS3 0.775454085 0.773 0.593 2.17E-88 C2 HLA-C 0.702574467 0.921 0.773 2.93E-85 C2 SLC4A7 0.806710795 0.335 0.089 7.45E-85 C2 HLA-B 0.721857222 0.968 0.889 4.19E-84 C2 ACADVL 0.788941073 0.755 0.587 1.71E-82 C2 GPA33 0.778266647 0.415 0.145 1.35E-81 C2 C15orf48 0.773468568 0.751 0.538 1.18E-80 C2 SERPINA1 1.278047178 0.426 0.17 7.81E-75 C2 NDUFA1 0.597376415 0.871 0.812 4.94E-74 C2 ID1 0.783042507 0.698 0.431 5.88E-72 C2 S100A14 0.682835932 0.778 0.598 3.28E-70 C2 MYO1A 0.725758171 0.376 0.138 3.94E-67 C2 GLRX 0.967178007 0.384 0.156 4.91E-67 C2 RNASE1 1.103982574 0.427 0.182 5.09E-67 C2 AGPAT2 0.779876556 0.707 0.557 3.04E-66 C2 SDCBP2 0.769761397 0.525 0.285 3.79E-65 C2 PRR13 0.747521518 0.686 0.569 9.65E-64 C2 PCK2 0.893268211 0.408 0.184 4.60E-63 C2 SLC5A1 0.758089818 0.3 0.095 5.82E-63 C2 IGLL5 0.392778293 0.621 0.385 8.25E-63 C2 ISG20 0.837286246 0.512 0.285 7.51E-61 C2 H2AFJ 0.737949484 0.664 0.521 2.38E-59 C2 PLAC8 0.784187682 0.61 0.374 2.17E-58 C2 RGS2 0.648909999 0.337 0.119 4.00E-58 C2 CYP3A5 0.75837767 0.653 0.488 1.81E-57 C2 MALL 0.808644457 0.515 0.306 8.47E-56 C2 AMN 0.773058465 0.636 0.477 1.13E-55 C2 CLDN7 0.491542284 0.846 0.756 2.11E-55 C2 CHP2 0.649765177 0.298 0.103 2.79E-55 C2

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

CYSTM1 0.505145073 0.884 0.766 9.86E-55 C2 KHK 0.646297553 0.251 0.073 1.01E-54 C2 TSPAN1 0.622419483 0.7 0.497 9.47E-54 C2 GSN 0.953122604 0.558 0.371 5.26E-51 C2 PCK1 0.976476868 0.461 0.242 3.98E-50 C2 ACSL5 0.868222334 0.437 0.242 5.82E-50 C2 TMEM37 0.689311981 0.298 0.111 6.21E-50 C2 SPINK1 0.499173224 0.782 0.594 3.49E-49 C2 ATP5D 0.49742402 0.875 0.796 6.55E-49 C2 ATP1A1 0.715454895 0.671 0.58 8.06E-48 C2 MUC13 0.768313141 0.579 0.422 1.71E-47 C2 ACAA1 0.782719519 0.497 0.319 3.49E-47 C2 CCL15 0.723792122 0.365 0.174 5.44E-46 C2 COX5B 0.423290466 0.923 0.87 5.86E-46 C2 KRT8 0.352487136 0.97 0.929 7.95E-46 C2 THOP1 0.663734245 0.344 0.155 1.14E-45 C2 TMSB4X 0.297126255 0.993 0.968 3.08E-45 C2 PSME2 0.608797394 0.76 0.664 5.02E-45 C2 NEAT1 0.536485544 0.908 0.899 4.92E-44 C2 ID3 0.656564473 0.405 0.198 1.15E-43 C2 EPS8L2 0.713662917 0.494 0.312 1.62E-43 C2 DGAT1 0.84177246 0.511 0.353 7.05E-43 C2 MALAT1 0.317192394 0.997 0.995 4.55E-42 C2 AKR7A3 0.821374394 0.551 0.411 6.51E-42 C2 GPX4 0.633968132 0.733 0.693 3.66E-39 C2 MYO7B 0.576521333 0.333 0.153 9.94E-39 C2 CYP4F12 0.490364421 0.258 0.095 2.16E-38 C2 HLA-F 0.645891116 0.599 0.488 5.23E-38 C2 ACHE 0.605895261 0.298 0.127 1.48E-37 C2 TMEM54 0.628034232 0.636 0.548 2.08E-37 C2 UQCR11.1 0.416467765 0.86 0.813 3.08E-36 C2 CFDP1 0.713664853 0.59 0.503 4.67E-36 C2 GUK1 0.484036493 0.784 0.719 6.98E-36 C2 MUC17 0.640387119 0.348 0.177 2.27E-35 C2 MISP 0.550583337 0.613 0.518 9.76E-33 C2 MPST 0.676569961 0.559 0.48 1.05E-31 C2 SH3BGRL3 0.493682688 0.726 0.659 1.91E-31 C2 MTRNR2L12 0.473898467 0.259 0.108 4.60E-30 C2 CAMK2N1 0.60558848 0.36 0.206 3.12E-29 C2 ATP5J 0.588757657 0.636 0.597 3.79E-29 C2 CTSE 0.55397192 0.609 0.432 6.29E-29 C2 SLC22A18 0.612603326 0.442 0.308 1.79E-27 C2 MT1H 1.026222459 0.431 0.272 7.90E-27 C2 COX4I1 0.368754797 0.886 0.838 8.78E-27 C2 UBL5 0.401184172 0.78 0.76 9.28E-27 C2 COX7C 0.416415024 0.861 0.8 1.02E-26 C2 DHRS11 0.596588803 0.332 0.195 1.87E-25 C2 VILL 0.597108633 0.406 0.27 9.84E-25 C2

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

UQCR10 0.44745256 0.669 0.627 2.08E-24 C2 RP11-294O2.2 0.63358118 0.348 0.214 2.55E-24 C2 MT1G 0.85748038 0.726 0.704 4.26E-24 C2 FUOM 0.66924466 0.38 0.249 5.50E-24 C2 MT1M 0.782821167 0.398 0.251 1.29E-23 C2 SPATS2L 0.564939713 0.605 0.552 3.03E-23 C2 ATP5I 0.326659579 0.862 0.87 3.88E-23 C2 CLTB 0.531273248 0.587 0.5 1.07E-22 C2 GFER 0.580532272 0.332 0.204 2.33E-22 C2 CFL1 0.327467544 0.906 0.843 2.84E-22 C2 CHCHD10 0.423874752 0.691 0.65 4.34E-21 C2 HLA-DRB1 0.73598574 0.547 0.47 8.27E-21 C2 HLA-DRA 0.751839274 0.548 0.456 1.70E-19 C2 OAT 0.700665226 0.413 0.317 2.16E-19 C2 PMM1 0.469865549 0.255 0.133 2.61E-19 C2 VSIG2 0.623195708 0.504 0.431 6.38E-19 C2 SAT2 0.673141763 0.431 0.347 8.99E-19 C2 TXNDC17 0.411673158 0.664 0.623 1.28E-18 C2 COX7B 0.322870298 0.799 0.773 1.43E-18 C2 SULT1B1 0.500166333 0.285 0.166 1.72E-18 C2 UQCRQ 0.355730062 0.796 0.751 3.59E-18 C2 CDKN1A 0.580287808 0.384 0.27 3.99E-18 C2 PSMB10 0.577559956 0.419 0.328 4.32E-18 C2 ATPIF1 0.369135789 0.718 0.715 6.86E-18 C2 COX7A2 0.337572609 0.738 0.689 1.41E-17 C2 SLC6A8 0.458005929 0.267 0.147 4.26E-17 C2 TNFRSF14 0.526602029 0.368 0.26 1.63E-16 C2 TMEM59 0.489647794 0.583 0.542 3.67E-16 C2 CCL28 0.508015153 0.289 0.18 6.94E-16 C2 CD151 0.443040878 0.573 0.547 1.34E-15 C2 GSTA1 0.755341114 0.348 0.244 2.82E-15 C2 PLA2G10 0.612602645 0.364 0.271 6.40E-15 C2 GDA 0.469225419 0.281 0.175 1.21E-14 C2 APOL1 0.646070672 0.292 0.183 1.50E-14 C2 HSD17B2 0.500114633 0.405 0.31 2.97E-14 C2 GADD45B 0.462203688 0.384 0.268 3.49E-14 C2 PEBP1 0.431444715 0.683 0.655 4.89E-14 C2 MT1E 0.491747919 0.749 0.701 9.86E-14 C2 BAIAP2L2 0.4149275 0.255 0.149 1.46E-13 C2 CD74 0.602469605 0.61 0.564 2.48E-13 C2 DUSP1 0.376252341 0.598 0.529 3.22E-13 C2 PPP1R14D 0.619549872 0.309 0.22 3.48E-13 C2 FCGRT 0.494444799 0.559 0.545 7.39E-13 C2 LGALS3BP 0.362148525 0.752 0.763 8.06E-13 C2 ZBTB7B 0.481136512 0.277 0.179 9.18E-13 C2 VPS28 0.410028165 0.596 0.582 1.26E-12 C2 GSDMB 0.511614679 0.317 0.223 1.70E-12 C2 CARD16 0.492277793 0.271 0.174 1.93E-12 C2

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

PPDPF 0.299188517 0.884 0.884 3.03E-12 C2 NDUFB1 0.380648819 0.621 0.633 4.52E-12 C2 ACO2 0.538365461 0.332 0.254 8.95E-12 C2 GNA11 0.494389239 0.373 0.298 1.25E-11 C2 SLC28A2 0.393816345 0.256 0.153 1.30E-11 C2 MTMR11 0.468267204 0.292 0.2 2.04E-11 C2 TST 0.55634143 0.333 0.259 4.06E-11 C2 FAM46A 0.485385311 0.336 0.246 5.85E-11 C2 MVP 0.445730654 0.521 0.502 1.37E-10 C2 CLDN3 0.405628022 0.551 0.494 3.27E-10 C2 ACADS 0.550773697 0.333 0.265 1.28E-09 C2 ITM2B 0.316690025 0.698 0.641 1.38E-09 C2 PNPLA2 0.482904095 0.383 0.316 2.92E-09 C2 PTGR1 0.574724143 0.318 0.246 4.53E-09 C2 NDUFA3 0.338779545 0.649 0.691 6.25E-09 C2 TYMP 0.475608951 0.39 0.319 7.92E-09 C2 C14orf2 0.308788104 0.711 0.726 1.00E-08 C2 FIS1 0.430669349 0.529 0.543 1.31E-08 C2 AKR1C3 0.435621778 0.421 0.363 1.44E-08 C2 REEP6 0.50743328 0.329 0.264 2.61E-08 C2 XAF1 0.37369627 0.263 0.177 2.69E-08 C2 TNFSF10 0.455707082 0.325 0.253 3.15E-08 C2 AKAP9 0.368843304 0.607 0.637 3.63E-08 C2 CD68 0.465582089 0.318 0.252 3.70E-08 C2 CD63 0.258710406 0.693 0.672 5.32E-08 C2 CBR1 0.63240638 0.391 0.36 6.03E-08 C2 CTSZ 0.479590167 0.321 0.258 8.76E-08 C2 CLDN15 0.414987295 0.325 0.243 1.63E-07 C2 GSTK1 0.455309817 0.503 0.491 1.70E-07 C2 EPHX2 0.417457508 0.291 0.217 1.98E-07 C2 ARHGEF16 0.416609865 0.282 0.203 2.09E-07 C2 PPP1R16A 0.416135167 0.439 0.404 2.67E-07 C2 P4HB 0.294469169 0.682 0.692 2.70E-06 C2 TNFRSF1A 0.535004802 0.35 0.312 7.81E-06 C2 SOD1 0.29016984 0.74 0.742 2.02E-05 C2 TP53I3 0.430329398 0.362 0.312 3.19E-05 C2 ALKBH7 0.346294588 0.51 0.535 5.17E-05 C2 COMTD1 0.447773247 0.42 0.404 6.09E-05 C2 RNF213 0.331551949 0.548 0.553 7.69E-05 C2 POR 0.445206615 0.333 0.289 8.07E-05 C2 SLC9A3R1 0.441200641 0.369 0.345 8.61E-05 C2 SLC25A5 0.345410348 0.618 0.589 1.39E-04 C2 COX17 0.374358687 0.514 0.543 1.54E-04 C2 CALM3 0.399660453 0.5 0.522 1.83E-04 C2 LUZP1 0.395636 0.288 0.231 2.25E-04 C2 ECHDC2 0.438553732 0.315 0.27 2.78E-04 C2 AKR7A2 0.482714382 0.326 0.301 6.14E-04 C2 PSME1 0.296494053 0.609 0.621 7.68E-04 C2

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

CALM1 0.306526061 0.598 0.621 1.16E-03 C2 FAM3C 0.500322362 0.299 0.265 1.19E-03 C2 MXD1 0.40303699 0.326 0.282 1.38E-03 C2 GNG5 0.37012652 0.497 0.531 1.49E-03 C2 SELENBP1 0.380311816 0.377 0.346 2.14E-03 C2 REEP3 0.435115296 0.289 0.253 2.15E-03 C2 TXNIP 0.438280268 0.353 0.313 2.82E-03 C2 HSD17B11 0.491698253 0.369 0.358 3.44E-03 C2 SCP2 0.357045065 0.478 0.502 3.62E-03 C2 TMEM256 0.447035883 0.372 0.37 3.98E-03 C2 MUC5AC 0.822465297 0.558 0.558 4.46E-03 C2 EPN1 0.412969874 0.366 0.348 5.04E-03 C2 CA2 0.338394349 0.421 0.376 6.84E-03 C2 C4orf3 0.443693159 0.415 0.435 9.35E-03 C2 SLC39A5 0.387182928 0.351 0.326 1.00E-02 C2 DDT 0.285412914 0.395 0.342 1.72E-02 C2 CHMP2A 0.30463879 0.556 0.592 1.80E-02 C2 N4BP2L2 0.312109891 0.506 0.533 2.29E-02 C2 NBL1 0.424597274 0.373 0.365 2.80E-02 C2 PEPD 0.52912792 0.296 0.279 3.44E-02 C2 EPS8L3 0.434956213 0.373 0.367 3.73E-02 C2 SMCHD1 0.396657265 0.336 0.309 3.87E-02 C2 AURKAIP1 0.295405842 0.561 0.62 4.10E-02 C2 PRDX5 0.253307816 0.672 0.711 4.61E-02 C2 SNORA76 0.821116626 0.705 0.452 8.01E-132 C3 FCGBP 1.187064627 0.388 0.11 3.52E-128 C3 SNHG8 0.788883467 0.643 0.438 8.93E-117 C3 POLR2L 0.63192373 0.805 0.707 1.96E-116 C3 SNORD3A 1.041319617 0.438 0.19 1.05E-93 C3 SYT8 0.75547821 0.293 0.096 6.87E-84 C3 CDC42EP5 0.486650514 0.471 0.232 3.24E-80 C3 CYBA 0.45628476 0.844 0.766 4.61E-68 C3 CHCHD10 0.490787057 0.74 0.615 5.02E-67 C3 RPL36A 0.392959085 0.93 0.877 1.27E-60 C3 EFHD2 0.45938101 0.535 0.396 3.01E-50 C3 S100A6 0.460143408 0.99 0.993 7.67E-50 C3 C1orf63 0.49177706 0.488 0.323 1.04E-48 C3 METTL12 0.51401503 0.288 0.134 4.14E-45 C3 RPS23 0.340089338 0.941 0.9 8.24E-44 C3 ACADVL 0.384776441 0.689 0.571 2.58E-43 C3 RPL35A 0.278592776 0.957 0.909 6.39E-42 C3 GSTK1 0.349149974 0.579 0.452 3.01E-39 C3 GKN1 0.349456444 0.258 0.113 3.63E-39 C3 KRT18 0.34462851 0.941 0.895 1.19E-38 C3 HSPG2 0.347371911 0.298 0.151 2.15E-37 C3 ARGLU1 0.461341547 0.682 0.615 2.27E-34 C3 SNHG12 0.393932969 0.256 0.131 1.17E-29 C3 MIF 0.354144594 0.732 0.67 2.30E-28 C3

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

KRT8 0.297163814 0.953 0.926 8.27E-28 C3 KCNQ1OT1 0.329255253 0.255 0.134 8.35E-27 C3 ATP2C2 0.366131107 0.296 0.178 3.69E-26 C3 MT1H 0.387488053 0.382 0.251 1.17E-25 C3 DMBT1 0.473081894 0.386 0.251 2.98E-25 C3 CLDN15 0.282009095 0.343 0.212 8.48E-25 C3 IGJ 0.33086418 0.573 0.465 2.21E-24 C3 ATPIF1 0.285832136 0.735 0.706 3.52E-23 C3 CD44 0.321651713 0.318 0.206 3.92E-22 C3 ABHD11 0.397765797 0.38 0.285 5.36E-21 C3 JUN 0.436572754 0.825 0.833 5.71E-20 C3 GADD45B 0.386140941 0.364 0.246 7.15E-20 C3 MIB2 0.270697188 0.264 0.161 1.56E-19 C3 SLC25A6 0.317351273 0.767 0.72 1.68E-19 C3 EFCAB4A 0.326379509 0.393 0.293 3.17E-19 C3 IER2 0.380155464 0.717 0.708 3.27E-19 C3 WASH4P 0.310084395 0.409 0.303 4.46E-19 C3 FOSB 0.549451472 0.645 0.612 1.35E-18 C3 AKAP9 0.328465834 0.655 0.622 3.56E-18 C3 SLC38A2 0.351747285 0.377 0.281 8.67E-18 C3 TRPM4 0.258974519 0.284 0.181 1.11E-17 C3 EGR1 0.424589167 0.453 0.365 3.82E-17 C3 ABCC3 0.33592781 0.536 0.468 8.90E-17 C3 INF2 0.288949735 0.353 0.255 3.68E-16 C3 RP11-304L19.5 0.282357094 0.292 0.205 7.56E-15 C3 HEXIM1 0.501684371 0.399 0.321 2.73E-14 C3 SOX4 0.45125972 0.587 0.539 4.90E-14 C3 SNHG9 0.307520311 0.385 0.292 1.19E-13 C3 CLDN3 0.387144638 0.543 0.482 6.43E-13 C3 HSPB1 0.288055794 0.652 0.615 8.22E-13 C3 S100A4 0.85719714 0.32 0.259 1.38E-11 C3 BTG1 0.323849433 0.595 0.541 1.54E-11 C3 TUBA1B 0.323695326 0.602 0.546 6.96E-11 C3 PNISR 0.324958611 0.525 0.483 1.55E-10 C3 PGC 1.125011202 0.322 0.222 4.28E-10 C3 PHLDA2 0.302166889 0.555 0.52 2.42E-09 C3 ERN2 0.251375892 0.453 0.384 6.63E-09 C3 YME1L1 0.322824127 0.445 0.394 7.65E-09 C3 PPP1R10 0.363171192 0.382 0.324 1.98E-08 C3 LIMA1 0.285254878 0.498 0.467 2.52E-08 C3 OLFM4 0.667641628 0.349 0.27 3.15E-08 C3 AMD1 0.336883643 0.455 0.421 1.46E-07 C3 EPHA2 0.300338868 0.255 0.196 3.09E-07 C3 SRSF7 0.257644818 0.597 0.589 1.61E-05 C3 CLDN4 0.274471219 0.807 0.828 4.58E-05 C3 N4BP2L2 0.271261239 0.542 0.524 5.62E-05 C3 RASSF7 0.25741084 0.38 0.343 2.44E-04 C3 LIPF 0.335283612 0.259 0.178 4.76E-04 C3

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

HNRNPAB 0.250388933 0.43 0.408 1.53E-03 C3 DDX46 0.257643376 0.439 0.426 1.82E-03 C3 IGLL5 0.395521109 0.438 0.407 4.63E-02 C3 REG1A 1.743046013 0.801 0.141 0.00E+00 C4 DPEP1 1.314421591 0.614 0.058 0.00E+00 C4 LIPF 1.294576725 0.906 0.115 0.00E+00 C4 CDKN2A 0.812799103 0.543 0.05 0.00E+00 C4 MAEL 0.74090016 0.49 0 0.00E+00 C4 PGC 0.59413135 0.891 0.173 0.00E+00 C4 NOTUM 0.571664707 0.354 0.003 0.00E+00 C4 LINC00392 0.404024191 0.336 0.001 0.00E+00 C4 BMP4 0.658845951 0.467 0.034 2.55E-294 C4 GHRL 0.555290465 0.439 0.027 2.71E-286 C4 NRCAM 0.289492392 0.273 0.004 4.84E-256 C4 NKD2 0.334452527 0.26 0.003 2.71E-248 C4 TPSAB1 0.41540638 0.381 0.025 5.47E-236 C4 LEMD1 0.332633045 0.272 0.006 6.97E-233 C4 VSNL1 0.396151634 0.311 0.015 3.27E-218 C4 PLA2G2A 1.050889502 0.3 0.016 5.78E-203 C4 IGFBP4 0.703990216 0.474 0.071 1.68E-194 C4 CFD 0.789112448 0.518 0.093 1.86E-184 C4 CLDN2 0.386933428 0.265 0.013 1.03E-183 C4 RP11-357H14.17 1.129177505 0.722 0.237 1.51E-168 C4 RPL36A 0.974855276 0.969 0.885 5.04E-164 C4 OLFM4 1.257135633 0.733 0.24 1.52E-160 C4 REG3A 1.09597425 0.263 0.018 2.23E-158 C4 LGALS3 2.053502328 0.959 0.799 3.15E-156 C4 NEBL 0.308436801 0.267 0.02 9.75E-156 C4 EFNA3 0.301142636 0.315 0.038 2.82E-141 C4 C9orf16 0.93471341 0.887 0.564 1.67E-140 C4 RPL23A 0.900588999 0.985 0.943 1.03E-134 C4 CEACAM5 0.706308284 0.588 0.162 1.20E-130 C4 RNF43 0.61944075 0.536 0.135 2.23E-130 C4 RPL35A 0.775258407 0.992 0.916 1.18E-128 C4 CTD-2314B22.3 0.271503839 0.275 0.03 4.18E-127 C4 FAM84A 0.56397349 0.478 0.106 2.51E-126 C4 TXN 0.85606312 0.957 0.8 6.68E-119 C4 STXBP6 0.325162248 0.358 0.062 4.03E-118 C4 HLA-DRB5 0.60629357 0.371 0.065 4.94E-118 C4 TPPP3 0.58505755 0.417 0.091 1.46E-115 C4 FAM177A1 0.868059555 0.778 0.471 1.44E-112 C4 MLXIPL 0.417681947 0.364 0.066 2.74E-111 C4 ASCL2 0.32984258 0.326 0.052 1.37E-110 C4 ANKH 0.294368453 0.313 0.05 4.21E-109 C4 MBIP 0.500689833 0.406 0.099 8.07E-108 C4 PSMA6 0.588898654 0.512 0.173 4.21E-104 C4 CRIP1 0.698507503 0.826 0.455 2.45E-102 C4 PAQR8 0.557892279 0.462 0.131 4.49E-101 C4

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

EEF1D 0.671859885 0.975 0.881 8.04E-101 C4 THRA 0.493356711 0.454 0.124 2.44E-100 C4 SOCS4 0.538119762 0.402 0.099 2.12E-98 C4 WDR72 0.370482008 0.369 0.085 1.15E-96 C4 MLLT6 0.560405041 0.5 0.159 3.47E-94 C4 TOMM7 0.715276864 0.874 0.731 3.76E-93 C4 SLC12A2 0.576302084 0.543 0.187 4.15E-93 C4 RPS2 0.623275796 0.998 0.948 1.56E-90 C4 RPS23 0.592118027 0.975 0.905 1.34E-86 C4 TNNC2 0.361742125 0.285 0.052 1.89E-85 C4 FKBP9 0.486176308 0.434 0.137 2.84E-84 C4 KRT18 0.667649222 0.978 0.901 1.40E-81 C4 MDK 0.595060596 0.843 0.548 2.25E-81 C4 SHFM1 0.676413796 0.833 0.622 3.64E-81 C4 PNN 0.960532097 0.815 0.518 4.21E-81 C4 IFITM1 0.382188044 0.404 0.116 8.45E-81 C4 GIT1 0.335855142 0.344 0.084 2.37E-80 C4 C4orf48 0.605571571 0.748 0.389 3.75E-79 C4 IGFBP2 0.295912761 0.351 0.082 8.84E-79 C4 DPP7 0.719532151 0.644 0.309 1.06E-78 C4 CYP2W1 0.4566677 0.305 0.066 4.47E-78 C4 SNHG18 0.293694791 0.369 0.1 9.65E-73 C4 GGH 0.662407836 0.477 0.181 1.61E-72 C4 HMGB1 0.676524164 0.873 0.715 3.74E-72 C4 ANP32B 0.744986377 0.748 0.486 6.74E-72 C4 S100A10 0.68058875 0.967 0.869 1.28E-70 C4 PPP1R1B 0.654444909 0.695 0.412 4.68E-67 C4 DNAJC15 0.650956001 0.714 0.461 2.44E-65 C4 BAZ1A 0.590831278 0.69 0.39 1.30E-62 C4 RPL31 0.477643212 0.99 0.963 4.09E-60 C4 DNPH1 0.562494847 0.79 0.568 4.49E-59 C4 C22orf39 0.387118269 0.462 0.188 9.06E-58 C4 MAPK1IP1L 0.754248295 0.526 0.282 1.04E-57 C4 EPHB2 0.253845836 0.31 0.084 3.39E-57 C4 DEK 0.603737982 0.755 0.502 1.13E-56 C4 AREG 0.297013831 0.318 0.091 1.29E-56 C4 PPP2R3C 0.349750743 0.421 0.159 4.46E-56 C4 COX6C 0.55988526 0.921 0.807 1.20E-55 C4 GKN1 0.252269582 0.404 0.129 1.27E-55 C4 CEACAM6 0.286367695 0.464 0.167 2.85E-55 C4 SNHG7 0.510536705 0.565 0.279 3.44E-55 C4 MACROD1 0.351994108 0.434 0.172 2.18E-54 C4 CD320 0.417465263 0.459 0.192 5.15E-53 C4 SLC2A8 0.307873397 0.339 0.113 2.44E-52 C4 TMSB10 0.379679231 0.997 0.976 2.81E-52 C4 ERAP2 0.306806403 0.343 0.108 7.84E-52 C4 CBX3 0.482305708 0.778 0.541 2.25E-51 C4 LACTB2 0.510852352 0.553 0.289 3.86E-51 C4

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

CMSS1 0.446441434 0.48 0.221 5.01E-51 C4 NDUFS6 0.501516072 0.841 0.677 8.61E-51 C4 C8orf59 0.557488043 0.724 0.481 2.07E-50 C4 DUT 0.476461626 0.485 0.226 9.04E-50 C4 CDH17 0.468124436 0.656 0.363 1.95E-49 C4 SNHG15 0.413817653 0.498 0.228 3.10E-49 C4 COMMD6 0.564553547 0.768 0.57 5.80E-48 C4 PSMB3 0.633961668 0.699 0.503 2.97E-46 C4 RANBP1 0.577814309 0.618 0.379 4.38E-46 C4 C9orf78 0.452093738 0.531 0.287 7.54E-46 C4 PDCD5 0.494053584 0.651 0.42 3.50E-45 C4 CCDC85B 0.492468862 0.594 0.325 5.21E-45 C4 MSRB2 0.393469673 0.457 0.219 6.83E-45 C4 NSMF 0.415369412 0.399 0.158 1.18E-44 C4 MIF 0.467514642 0.833 0.672 4.48E-44 C4 MCM3 0.423673875 0.399 0.17 1.17E-43 C4 NENF 0.418388567 0.589 0.334 1.47E-43 C4 NFKBIA 0.733524303 0.841 0.621 1.54E-43 C4 TMEM141 0.586062459 0.661 0.433 2.31E-43 C4 KLK10 0.326891386 0.293 0.097 8.66E-42 C4 PLOD3 0.338050193 0.416 0.183 1.20E-41 C4 MYO19 0.257098315 0.358 0.136 1.55E-41 C4 EIF3J 0.477616043 0.863 0.63 1.62E-41 C4 NACA 0.509633714 0.856 0.733 2.27E-41 C4 MRPL52 0.470736574 0.786 0.607 2.45E-41 C4 NXT1 0.36434256 0.409 0.19 4.27E-41 C4 SDF2L1 0.409025728 0.631 0.37 4.92E-41 C4 LTBP4 0.335750685 0.442 0.194 5.26E-40 C4 CHD7 0.412866092 0.495 0.242 5.54E-40 C4 CDX2 0.284144698 0.339 0.13 1.05E-39 C4 HECTD1 0.33489665 0.478 0.24 9.52E-39 C4 ADAP1 0.340983174 0.432 0.194 1.35E-38 C4 GRINA 0.383590357 0.46 0.229 1.76E-38 C4 SPTSSA 0.446698628 0.487 0.265 2.78E-38 C4 WDR24 0.258709048 0.316 0.116 3.33E-38 C4 EDN1 0.548601747 0.528 0.273 4.10E-38 C4 CLDN3 0.416429505 0.735 0.472 4.62E-38 C4 PFDN5 0.381861428 0.841 0.699 5.06E-38 C4 RAC1 0.468593339 0.844 0.683 8.17E-38 C4 BID 0.286300107 0.394 0.177 1.02E-37 C4 BRD7 0.363853396 0.483 0.241 1.39E-37 C4 GSTM3 0.355335377 0.488 0.253 2.72E-36 C4 SNRPD2 0.37440954 0.876 0.714 3.24E-36 C4 TMEM106C 0.317049384 0.437 0.212 5.09E-36 C4 GSTP1 0.40873387 0.94 0.861 1.28E-35 C4 TSTD1 0.412988115 0.621 0.405 1.83E-35 C4 POLR1C 0.310436906 0.411 0.192 3.64E-35 C4 TAF1D 0.44731983 0.72 0.495 4.93E-35 C4

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

PSME1 0.458808889 0.76 0.602 6.16E-35 C4 AP2B1 0.371163654 0.687 0.441 8.95E-35 C4 PSMD11 0.450904691 0.522 0.317 9.88E-35 C4 IFITM3 0.465664555 0.772 0.577 1.23E-34 C4 PPP1R14B 0.355662949 0.48 0.266 1.85E-34 C4 PTMS 0.323393129 0.472 0.228 2.26E-34 C4 MRPL36 0.391078189 0.47 0.264 2.49E-34 C4 YDJC 0.269957314 0.377 0.171 2.79E-34 C4 ANXA13 0.308314268 0.389 0.178 8.85E-34 C4 EAPP 0.391882568 0.497 0.289 9.36E-34 C4 RARRES1 0.349895994 0.366 0.162 9.58E-34 C4 FERMT1 0.386921097 0.523 0.303 1.79E-33 C4 PSME2 0.500181285 0.79 0.662 2.34E-33 C4 CD74 0.547159254 0.767 0.545 4.26E-33 C4 MCUR1 0.327918435 0.381 0.181 6.16E-33 C4 SNX6 0.395517871 0.53 0.319 7.89E-33 C4 FBXO34 0.32298363 0.371 0.171 1.00E-32 C4 C7orf50 0.352525702 0.444 0.237 1.03E-32 C4 HOXA10 0.25338541 0.356 0.158 3.59E-32 C4 TCEB1 0.42283761 0.652 0.437 4.00E-32 C4 ATHL1 0.255559742 0.257 0.089 7.11E-32 C4 NEDD8 0.38119109 0.714 0.536 2.86E-31 C4 AP1S1 0.371710336 0.518 0.318 9.37E-31 C4 FOXP4 0.25741442 0.348 0.152 1.38E-30 C4 RBMX 0.410433357 0.705 0.476 1.57E-30 C4 RND3 0.443769687 0.646 0.394 2.43E-30 C4 PRELID1 0.439208536 0.626 0.436 4.40E-30 C4 LINC01133 0.309379123 0.591 0.343 5.72E-30 C4 UFM1 0.450855718 0.579 0.388 5.78E-30 C4 CXCL1 0.418741324 0.523 0.276 2.65E-29 C4 PSMD3 0.408996823 0.488 0.296 3.71E-29 C4 MYCBP2 0.278677782 0.447 0.226 7.63E-29 C4 RNF145 0.333686528 0.627 0.388 1.05E-28 C4 RHEB 0.3585498 0.508 0.309 1.38E-28 C4 REXO4 0.351202806 0.483 0.262 1.55E-28 C4 CXCL2 0.358933345 0.528 0.285 1.67E-28 C4 HMGN2 0.423157039 0.677 0.456 1.85E-28 C4 EEF1G 0.480309975 0.545 0.373 2.71E-28 C4 CASC3 0.259996725 0.344 0.155 3.52E-28 C4 PLA2G16 0.373817034 0.548 0.337 5.16E-28 C4 SRGN 0.436886305 0.32 0.133 1.00E-27 C4 PHF14 0.375433048 0.68 0.468 1.13E-27 C4 CHRAC1 0.276769857 0.366 0.177 1.22E-27 C4 C7orf73 0.285047438 0.462 0.258 1.66E-27 C4 CENPW 0.305287221 0.27 0.107 2.61E-27 C4 MRPS17.1 0.305008922 0.421 0.226 2.72E-27 C4 FBL 0.3725207 0.666 0.48 3.16E-27 C4 CHCHD7 0.345288592 0.561 0.355 4.11E-27 C4

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

C14orf166 0.449463005 0.609 0.436 1.24E-26 C4 CNPY3 0.287989676 0.425 0.231 1.27E-26 C4 TONSL 0.287749792 0.275 0.109 2.85E-26 C4 PSMD5-AS1 0.280761905 0.44 0.226 3.00E-26 C4 C9orf142 0.377911283 0.568 0.359 4.02E-26 C4 POLR2F 0.295283932 0.49 0.292 4.15E-26 C4 SPINK1 0.328621573 0.831 0.593 4.71E-26 C4 WWP1 0.261921387 0.346 0.163 3.67E-25 C4 NTMT1 0.273544306 0.43 0.232 6.15E-25 C4 ARMC10 0.260363964 0.339 0.172 6.93E-25 C4 NUDT1 0.284778176 0.404 0.211 7.00E-25 C4 TBCC 0.311986197 0.386 0.199 8.00E-25 C4 LCN2 0.284289475 0.748 0.509 9.15E-25 C4 SET 0.375930838 0.743 0.574 1.74E-24 C4 BRD9 0.267593158 0.45 0.235 2.11E-24 C4 PAFAH1B3 0.253559634 0.449 0.258 4.11E-24 C4 HNRNPA1 0.397317305 0.849 0.732 4.80E-24 C4 ENY2 0.349923341 0.73 0.541 1.00E-23 C4 CXCL3 0.347515107 0.667 0.425 2.04E-23 C4 NSRP1 0.296211164 0.526 0.33 2.22E-23 C4 IER5L 0.263718288 0.263 0.106 2.46E-23 C4 HSP90AB1 0.353001249 0.891 0.737 3.10E-23 C4 NDUFB2 0.34112454 0.74 0.602 3.50E-23 C4 NCBP2-AS2 0.298687389 0.381 0.202 4.01E-23 C4 ATP1B3 0.443672317 0.553 0.395 4.38E-23 C4 EIF2S2 0.319465213 0.788 0.602 4.65E-23 C4 TMEM123 0.364276717 0.477 0.301 5.53E-23 C4 KRTCAP2 0.325469633 0.684 0.509 1.29E-22 C4 MEA1 0.275337326 0.47 0.283 1.54E-22 C4 DAD1 0.425940011 0.675 0.497 1.88E-22 C4 TSC22D1 0.359688488 0.642 0.438 2.01E-22 C4 FAU 0.271622165 0.952 0.899 2.98E-22 C4 TMEM258 0.319052433 0.765 0.603 3.42E-22 C4 MRP63 0.327981729 0.642 0.469 3.59E-22 C4 TOP2A 0.394661737 0.303 0.135 4.53E-22 C4 TRMT10C 0.322718059 0.452 0.269 7.98E-22 C4 SUB1 0.345167234 0.697 0.537 1.02E-21 C4 RSBN1L 0.307176131 0.571 0.353 1.46E-21 C4 NBL1 0.293848701 0.531 0.345 1.55E-21 C4 SIVA1 0.300440046 0.56 0.37 1.57E-21 C4 METAP2 0.359274521 0.636 0.444 1.77E-21 C4 LSM5 0.397628879 0.578 0.416 6.76E-21 C4 ZNF830 0.293111368 0.349 0.181 1.25E-20 C4 SNRPF 0.309241213 0.7 0.501 1.85E-20 C4 PSMG4 0.264589897 0.437 0.256 2.14E-20 C4 SCFD1 0.252303161 0.387 0.217 2.25E-20 C4 PSMA2.1 0.431679334 0.589 0.435 2.91E-20 C4 DDX21 0.316508582 0.738 0.533 7.37E-20 C4

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

EIF3B 0.291808512 0.536 0.351 8.35E-20 C4 ID1 0.375548 0.666 0.442 1.05E-19 C4 H2AFV 0.367052085 0.603 0.432 1.95E-19 C4 SNRPG 0.327322844 0.758 0.569 1.96E-19 C4 CKB 0.353781055 0.262 0.12 2.41E-19 C4 PPP1R2 0.251735491 0.399 0.235 2.53E-19 C4 ARHGAP5 0.276853458 0.472 0.294 3.56E-19 C4 SELENBP1 0.466350421 0.508 0.33 4.12E-19 C4 MATN2 0.286428736 0.28 0.135 4.76E-19 C4 PTGES2 0.252989395 0.487 0.315 7.62E-19 C4 POMP 0.381842434 0.662 0.522 7.89E-19 C4 SORD 0.314158026 0.434 0.271 1.11E-18 C4 C6orf132 0.339574061 0.543 0.361 1.20E-18 C4 CISD3 0.307525583 0.646 0.505 1.97E-18 C4 RPA3 0.327777618 0.483 0.315 4.83E-18 C4 NDUFA4 0.373630016 0.811 0.699 5.58E-18 C4 H2AFZ 0.367261247 0.599 0.423 7.80E-18 C4 MRPS33 0.28953977 0.498 0.334 9.42E-18 C4 CD47 0.373288031 0.472 0.317 9.69E-18 C4 ZNF706 0.327732127 0.662 0.506 1.19E-17 C4 CKS1B 0.368574324 0.439 0.281 1.23E-17 C4 PFDN2 0.291634336 0.611 0.434 1.76E-17 C4 DNAJC19 0.287686823 0.478 0.318 2.75E-17 C4 SDF2 0.255701951 0.454 0.293 2.96E-17 C4 SSBP1 0.304955459 0.594 0.435 3.38E-17 C4 PLP2 0.343461616 0.55 0.378 4.20E-17 C4 SAP18 0.293001666 0.695 0.556 5.12E-17 C4 ESF1 0.274828537 0.579 0.383 6.03E-17 C4 TATDN1 0.259713046 0.445 0.282 7.75E-17 C4 COX20 0.281300228 0.593 0.415 8.63E-17 C4 POLE3 0.260750057 0.445 0.277 8.85E-17 C4 MDH2 0.361974713 0.576 0.431 9.37E-17 C4 C15orf48 0.348697136 0.705 0.55 1.05E-16 C4 MRPL41 0.265383206 0.733 0.562 1.47E-16 C4 PUF60 0.282866122 0.576 0.407 1.84E-16 C4 SERPINB5 0.267984954 0.442 0.274 2.90E-16 C4 TMEM261 0.276089467 0.465 0.307 3.60E-16 C4 SURF1 0.283973197 0.485 0.331 3.77E-16 C4 EBPL 0.276657349 0.447 0.279 4.42E-16 C4 PTGES3 0.345308586 0.589 0.452 7.62E-16 C4 RNPS1 0.324180519 0.553 0.41 9.31E-16 C4 GGCT 0.317749042 0.533 0.379 1.02E-15 C4 PSMC6 0.280198266 0.492 0.338 1.27E-15 C4 KNOP1 0.270610506 0.565 0.389 4.42E-15 C4 POLR2K 0.276750297 0.56 0.403 5.65E-15 C4 UCHL3 0.291942265 0.44 0.289 9.74E-15 C4 FABP5 0.37585503 0.593 0.405 2.09E-14 C4 PPA1 0.369801949 0.667 0.526 4.24E-14 C4

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

MRPL50 0.264580708 0.417 0.27 2.46E-13 C4 SSNA1 0.273282043 0.568 0.422 7.42E-13 C4 GTF3A 0.267584842 0.46 0.315 1.17E-12 C4 CD9 0.277939146 0.634 0.501 7.18E-11 C4 TUBA1B 0.331181962 0.687 0.548 1.30E-10 C4 ASS1 0.30406379 0.507 0.371 6.22E-10 C4 TRIM31 0.299188039 0.593 0.445 3.98E-09 C4 PABPC1 0.253117188 0.919 0.802 7.77E-09 C4 PSMB7 0.250150809 0.576 0.446 3.97E-08 C4 HES1 0.561654133 0.808 0.69 1.76E-07 C4 EIF3E 0.26859726 0.618 0.493 3.15E-05 C4 LY6K 1.392416098 0.915 0.001 0.00E+00 C5 HLA-DPA1 1.236223481 0.859 0.118 0.00E+00 C5 AKR1C4 0.686176115 0.535 0.021 0.00E+00 C5 BNIP3 0.311943162 0.42 0.013 0.00E+00 C5 APBB1IP 0.261171784 0.359 0.013 1.28E-263 C5 FIBCD1 0.321542228 0.399 0.021 8.82E-252 C5 AKR1C2 1.067024284 0.481 0.04 1.36E-237 C5 METTL5 1.07654769 0.899 0.287 5.13E-230 C5 HLA-DPB1 0.866956546 0.808 0.17 7.56E-220 C5 CDCA7 1.115261639 0.723 0.143 1.80E-204 C5 GSTM3 0.887560973 0.836 0.231 4.84E-193 C5 PCBD1 1.023187553 0.927 0.373 9.93E-190 C5 AIFM2 0.555736854 0.606 0.104 2.35E-187 C5 HLA-DMA 0.876756551 0.852 0.254 2.75E-185 C5 FAM213A 0.733172499 0.824 0.229 6.75E-183 C5 SSB 1.112571092 0.932 0.376 3.26E-179 C5 DDT 0.907755606 0.927 0.3 1.12E-176 C5 SFXN4 0.502481813 0.669 0.141 1.01E-174 C5 PPIG 0.953136011 0.953 0.408 2.61E-174 C5 HLA-DRB1 1.201901849 0.958 0.439 1.38E-173 C5 LY6E 1.222637727 0.944 0.408 3.47E-172 C5 RAB40B 0.576401878 0.756 0.182 6.62E-171 C5 RPS2 1.029126636 1 0.95 4.61E-170 C5 EIF3H 1.107833705 0.962 0.475 9.21E-170 C5 HLA-DRA 1.122880167 0.965 0.425 5.31E-169 C5 TATDN1 0.736190014 0.819 0.255 6.68E-167 C5 HAT1 0.536417176 0.662 0.142 2.89E-166 C5 SUMO1 0.914965982 0.911 0.362 3.64E-165 C5 EIF3E 1.207464631 0.967 0.468 2.57E-164 C5 CYHR1 0.523676008 0.77 0.18 2.08E-163 C5 GPX2 1.219818251 0.981 0.607 2.57E-163 C5 QPRT 0.636187479 0.763 0.202 5.70E-156 C5 ZNF503 0.296849221 0.418 0.049 1.80E-155 C5 PTP4A3 0.295493663 0.369 0.038 5.26E-154 C5 TMEM230 0.822657248 0.876 0.335 7.78E-151 C5 PRDX1 1.055866003 0.993 0.631 9.15E-148 C5 TKT 0.985916876 0.958 0.468 1.39E-147 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

PRDX3 0.72576583 0.85 0.302 5.35E-146 C5 WDR12 0.452054432 0.587 0.123 5.73E-146 C5 TXN 1.194653619 0.998 0.802 1.08E-145 C5 NUPR1 0.667355615 0.467 0.07 2.70E-145 C5 TALDO1 0.810988524 0.925 0.405 7.19E-144 C5 BRK1 0.743082135 0.901 0.374 3.65E-142 C5 ZFAS1 0.979480507 0.984 0.568 1.71E-141 C5 HLA-DQB1 0.557028674 0.688 0.17 3.02E-140 C5 PDZK1IP1 1.061491791 0.871 0.328 1.90E-139 C5 ECHS1 0.823563223 0.899 0.409 8.73E-139 C5 ATP5O 0.923758281 0.958 0.553 5.24E-138 C5 CD74 1.017446959 0.974 0.535 3.97E-137 C5 MRPS16 0.63475184 0.791 0.272 1.26E-136 C5 RGS10 0.399945929 0.538 0.109 3.12E-136 C5 GOT1 0.363195637 0.577 0.121 5.63E-136 C5 UBE2V2 0.569418255 0.756 0.231 7.45E-136 C5 METAP1D 0.272048683 0.397 0.053 7.61E-136 C5 EPHX1 0.504345726 0.57 0.126 7.09E-135 C5 FUOM 0.519910247 0.782 0.222 7.85E-135 C5 BLOC1S2 0.535642293 0.671 0.184 1.17E-134 C5 MRPL43 0.508560007 0.749 0.23 1.68E-132 C5 MGMT 0.543009147 0.822 0.272 7.31E-132 C5 GHITM 0.70687699 0.847 0.328 4.67E-131 C5 GSTO2 0.431908997 0.606 0.148 8.98E-131 C5 GORASP2 0.616228748 0.763 0.251 2.39E-129 C5 BST2 0.729427521 0.901 0.349 3.26E-129 C5 CD44 0.477595599 0.744 0.199 2.63E-128 C5 FASTKD1 0.278892021 0.472 0.081 4.83E-128 C5 DEPTOR 0.365487386 0.526 0.108 1.48E-127 C5 FKBP1A 0.736862807 0.887 0.377 1.70E-127 C5 GAPDH 0.86512972 1 0.909 1.84E-127 C5 GSTM4 0.519111812 0.634 0.163 3.33E-127 C5 C1orf43 0.707503303 0.854 0.338 1.28E-126 C5 LTB 0.527738018 0.354 0.043 2.76E-126 C5 PSMF1 0.457565325 0.692 0.2 2.99E-126 C5 ARID5B 0.509613217 0.603 0.142 2.84E-125 C5 ZFAND1 0.538257007 0.702 0.212 5.68E-125 C5 GRINA 0.486371138 0.735 0.214 9.97E-125 C5 LYRM1 0.388035396 0.58 0.136 1.26E-124 C5 HLA-DMB 0.28428854 0.439 0.072 4.22E-124 C5 DMBT1 1.212288823 0.777 0.253 5.40E-124 C5 HSPD1 0.929683749 0.967 0.487 6.58E-123 C5 GTF3A 0.619192859 0.803 0.291 1.14E-121 C5 AKR7A3 0.730986942 0.899 0.39 1.84E-121 C5 EBAG9 0.514337163 0.768 0.257 2.15E-121 C5 MRPS28 0.455273687 0.714 0.218 4.01E-121 C5 TOP1MT 0.347598137 0.547 0.124 4.86E-120 C5 GPR160 0.730866989 0.772 0.279 1.64E-119 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

TMEM59 0.781268842 0.96 0.512 9.96E-119 C5 EEF1D 0.684290251 1 0.882 1.45E-118 C5 C11orf1 0.336756719 0.568 0.136 1.60E-118 C5 RPIA 0.418697419 0.688 0.201 1.77E-118 C5 ANAPC16 0.595250914 0.824 0.331 8.74E-118 C5 KRTCAP3 0.652364378 0.826 0.332 1.46E-117 C5 KCNQ1OT1 0.453717933 0.603 0.136 3.10E-117 C5 MRPL15 0.562413216 0.732 0.246 2.46E-116 C5 MLTK 0.377689016 0.484 0.098 2.74E-116 C5 DDOST 0.583324816 0.777 0.285 1.85E-115 C5 FTH1 1.051571518 1 0.933 2.77E-115 C5 UQCRB 0.737809427 0.988 0.782 2.48E-114 C5 PTGR1 0.570960291 0.704 0.217 1.94E-113 C5 NPM3 0.420074375 0.603 0.163 1.70E-112 C5 CASP8 0.370138563 0.624 0.163 7.34E-111 C5 TSTA3 0.786629681 0.972 0.575 4.32E-110 C5 FAU 0.579412856 0.998 0.897 4.89E-110 C5 VDAC2 0.731147333 0.885 0.422 4.78E-109 C5 SLC39A4 0.647261026 0.897 0.398 8.54E-109 C5 H1F0 0.46815586 0.643 0.174 9.80E-109 C5 EMG1 0.412108058 0.65 0.194 6.37E-108 C5 COPS5 0.514852998 0.725 0.256 1.83E-107 C5 NDUFB5 0.64286018 0.843 0.357 5.92E-107 C5 UQCRC2 0.57737949 0.854 0.354 6.90E-107 C5 BAIAP2 0.289894925 0.545 0.128 9.94E-107 C5 CISD1 0.513713543 0.796 0.3 1.21E-106 C5 MRTO4 0.38603772 0.585 0.158 7.95E-106 C5 OLA1 0.549558407 0.758 0.273 5.07E-105 C5 FTL 0.941554098 1 0.911 7.18E-105 C5 EMC2 0.388617493 0.596 0.17 7.90E-105 C5 MRPL51 0.597818199 0.883 0.383 4.37E-103 C5 ATP6V0B 0.662539574 0.885 0.414 4.47E-103 C5 COX7A2L 0.62955003 0.845 0.365 4.84E-103 C5 EIF1 0.72548574 0.995 0.862 6.06E-103 C5 TMEM50A 0.527928688 0.822 0.335 1.45E-102 C5 ATP1B3 0.664677172 0.864 0.374 4.13E-102 C5 ORMDL1 0.39538932 0.688 0.221 1.24E-101 C5 TMEM45B 0.568836279 0.763 0.278 2.81E-101 C5 IFI6 0.927297958 0.836 0.342 3.13E-101 C5 ANXA7 0.390789508 0.692 0.228 5.17E-101 C5 SLC39A1 0.407368791 0.643 0.2 6.63E-101 C5 PDLIM1 0.671775328 0.887 0.425 8.46E-101 C5 ENC1 0.331876951 0.549 0.133 9.73E-101 C5 SUMO2 0.71058078 0.939 0.49 4.20E-100 C5 CD27-AS1 0.250724734 0.467 0.102 4.23E-100 C5 NOP58 0.532286372 0.808 0.315 3.85E-99 C5 NME3 0.4450967 0.784 0.289 7.55E-99 C5 GPAA1 0.521559003 0.784 0.303 1.43E-98 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

DEGS2 0.342615737 0.603 0.164 1.61E-98 C5 TERF1 0.317807399 0.627 0.186 5.31E-97 C5 MRPL37 0.374802462 0.648 0.213 7.39E-97 C5 NDUFB9 0.689679341 0.981 0.632 8.69E-97 C5 ATP5F1 0.671260091 0.901 0.421 9.34E-97 C5 UQCRH 0.67015242 0.984 0.703 2.72E-96 C5 VPS28 0.629669844 0.953 0.552 3.54E-96 C5 PTRH1 0.296063286 0.594 0.167 4.16E-96 C5 PPP1R16A 0.558665928 0.864 0.369 8.70E-96 C5 RPL35A 0.57906004 1 0.918 2.38E-95 C5 CKS1B 0.496492343 0.735 0.261 4.53E-95 C5 ATP5G3 0.79197483 0.979 0.684 8.76E-95 C5 AKR1C3 0.911359912 0.779 0.335 2.16E-94 C5 SDHC 0.528580966 0.791 0.322 3.55E-94 C5 ITGA6 0.535521618 0.847 0.347 3.95E-94 C5 FAM45A 0.29624774 0.563 0.154 4.70E-94 C5 PSMA7 0.704872149 0.967 0.561 7.58E-94 C5 TMEM176A 0.497356607 0.808 0.306 5.33E-93 C5 SLC40A1 0.513672334 0.782 0.285 1.18E-92 C5 CD9 0.703044414 0.927 0.481 1.28E-92 C5 RSL1D1 0.553343778 0.838 0.372 1.29E-92 C5 TMEM106C 0.394205556 0.646 0.202 1.43E-92 C5 COX4I1 0.571527027 1 0.831 2.20E-92 C5 EEF1A1 0.684080018 1 0.937 2.39E-92 C5 PDIA2 0.278169254 0.319 0.049 2.74E-92 C5 RER1 0.496809385 0.833 0.36 3.50E-92 C5 GLRX3 0.41579365 0.655 0.22 5.11E-92 C5 POLR2K 0.572847424 0.847 0.384 6.80E-92 C5 TEX264 0.401483039 0.69 0.243 7.28E-92 C5 PAPOLA 0.491022378 0.838 0.357 8.01E-92 C5 KLK1 0.386531545 0.458 0.101 2.14E-91 C5 SPCS2 0.628957918 0.894 0.422 2.33E-91 C5 DCAF13 0.390783856 0.681 0.225 2.36E-91 C5 CALM1 0.656286633 0.951 0.589 3.94E-91 C5 TMEM126A 0.324100536 0.587 0.18 2.67E-90 C5 EIF3L 0.540034171 0.789 0.323 2.98E-90 C5 MINOS1 0.648261476 0.941 0.527 3.41E-90 C5 EMC3 0.31864515 0.589 0.176 4.30E-90 C5 C21orf59 0.386692585 0.695 0.25 5.28E-90 C5 ATP6V1G1 0.628338128 0.937 0.463 7.62E-90 C5 MRPL24 0.437415743 0.704 0.262 1.22E-89 C5 UFC1 0.549691688 0.894 0.427 1.54E-89 C5 MDH2 0.609875239 0.878 0.41 7.36E-89 C5 HLA-B 0.694561988 1 0.892 1.22E-88 C5 MRPS6 0.383114477 0.606 0.192 1.91E-88 C5 TMEM123 0.417712078 0.749 0.284 5.17E-88 C5 PUF60 0.50704451 0.857 0.388 5.34E-88 C5 NDUFB3 0.650613002 0.939 0.568 6.20E-88 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

TMEM50B 0.420915847 0.718 0.269 1.08E-87 C5 CUTA 0.563624012 0.913 0.445 2.45E-87 C5 ISCA1 0.344481309 0.603 0.194 4.02E-87 C5 EXOSC1 0.267862212 0.509 0.137 6.48E-87 C5 TXNDC12 0.366078926 0.664 0.23 8.20E-87 C5 NQO1 0.737828917 0.948 0.534 1.13E-86 C5 EIF3D 0.494301272 0.779 0.328 1.65E-86 C5 SMC3 0.325364853 0.606 0.185 3.87E-86 C5 MKKS 0.432400679 0.728 0.281 4.71E-86 C5 HSD17B11 0.466950486 0.793 0.322 5.61E-86 C5 ERH 0.568166373 0.899 0.413 6.81E-86 C5 MOB4 0.325605613 0.624 0.206 8.94E-86 C5 PPA1 0.695386208 0.923 0.509 2.07E-85 C5 SSR2 0.600459545 0.906 0.481 2.45E-85 C5 HSP90AA1 0.677531956 0.991 0.715 2.51E-85 C5 TIMM9 0.316678789 0.613 0.196 3.13E-85 C5 VPS26A 0.260685526 0.523 0.149 1.04E-82 C5 PEX2 0.330214821 0.636 0.212 3.92E-82 C5 RAB2A 0.599679719 0.918 0.466 4.58E-82 C5 SLC52A2 0.404519785 0.751 0.302 6.69E-82 C5 EXOSC4 0.388288723 0.7 0.262 6.77E-82 C5 EIF1B 0.336761627 0.688 0.248 1.06E-81 C5 DDRGK1 0.449003168 0.815 0.362 4.75E-81 C5 NDUFB8.1 0.581189894 0.915 0.5 5.07E-81 C5 CLN3.1 0.292101367 0.585 0.184 6.11E-81 C5 SLC25A26 0.274733682 0.549 0.165 6.28E-81 C5 C20orf27 0.314656943 0.573 0.178 6.46E-81 C5 ATP5L 0.567402745 0.988 0.725 9.63E-81 C5 MGST2 0.528771126 0.873 0.414 1.27E-80 C5 PGD 0.303041719 0.523 0.153 1.36E-80 C5 CAMK2G 0.278896471 0.549 0.156 1.37E-80 C5 RBCK1 0.443269596 0.772 0.323 2.34E-80 C5 LYRM4 0.300360201 0.577 0.183 2.66E-80 C5 EMP2 0.468325129 0.831 0.353 3.85E-80 C5 MRPL9 0.329632647 0.592 0.198 4.10E-80 C5 APMAP 0.300754785 0.624 0.209 1.38E-79 C5 HSPE1 0.644202944 0.988 0.691 2.75E-79 C5 MRPL20 0.464663959 0.826 0.372 2.91E-79 C5 LAPTM4A 0.562970857 0.885 0.39 4.06E-79 C5 GID8 0.307971988 0.61 0.212 4.82E-79 C5 NAA20 0.387913171 0.702 0.272 6.19E-79 C5 NACA 0.59162276 0.986 0.726 8.72E-79 C5 ATP5G1 0.711226829 0.911 0.523 1.31E-78 C5 NDUFA9 0.40054749 0.707 0.27 1.91E-78 C5 RPS23 0.516745834 1 0.906 3.91E-78 C5 REXO2 0.318573047 0.585 0.192 1.29E-77 C5 NIFK 0.377491037 0.69 0.254 1.45E-77 C5 RRS1 0.292410142 0.533 0.161 1.69E-77 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

TRAM1 0.479677239 0.803 0.335 3.65E-77 C5 TMBIM4.1 0.489012091 0.784 0.339 4.36E-77 C5 ASPH 0.59817761 0.817 0.375 4.98E-77 C5 TM2D1 0.252164554 0.521 0.153 6.66E-77 C5 TOMM22 0.378902146 0.744 0.291 7.72E-77 C5 EI24 0.412359817 0.777 0.324 1.13E-76 C5 ARMC1 0.251687169 0.474 0.131 1.58E-76 C5 COX6C 0.593881282 0.995 0.805 2.36E-76 C5 LAMTOR1 0.445174395 0.836 0.383 4.68E-76 C5 TMEM179B 0.438352805 0.735 0.306 1.98E-75 C5 APRT 0.588940652 0.951 0.608 2.85E-75 C5 ATP5G2 0.578240522 0.962 0.619 3.93E-75 C5 BANF1 0.448180219 0.864 0.377 4.41E-75 C5 ANAPC13 0.308659343 0.615 0.214 4.95E-75 C5 TMEM176B 0.459049616 0.819 0.34 4.98E-75 C5 PSMD4 0.438855487 0.845 0.387 2.04E-74 C5 ZC3H15 0.503563621 0.873 0.439 2.69E-74 C5 IFITM3 0.744672398 0.948 0.568 2.91E-74 C5 SPCS1 0.524677816 0.913 0.483 4.15E-74 C5 MIEN1 0.381837901 0.772 0.331 6.10E-74 C5 NOC2L 0.285472779 0.646 0.223 2.87E-73 C5 IMPDH2 0.491910072 0.805 0.364 2.97E-73 C5 PSMB5 0.44681019 0.817 0.338 7.18E-73 C5 AKR1A1 0.484304985 0.927 0.48 9.19E-73 C5 44089 0.443049523 0.798 0.36 1.18E-72 C5 LCN2 1.018095129 0.908 0.504 1.39E-72 C5 ATRAID 0.421049741 0.784 0.329 1.39E-72 C5 HNMT 0.316081765 0.688 0.26 5.17E-72 C5 SQSTM1 0.683575218 0.937 0.586 5.53E-72 C5 DUSP23 0.333857904 0.7 0.275 1.14E-71 C5 BTF3 0.578922521 0.948 0.611 1.29E-71 C5 MAGOH 0.327736418 0.709 0.276 1.30E-71 C5 PMVK 0.299823873 0.709 0.275 1.59E-71 C5 TMEM97 0.414848864 0.683 0.264 1.98E-71 C5 CNN3 0.264677203 0.378 0.087 2.53E-71 C5 ABHD14B 0.369482188 0.725 0.297 2.73E-71 C5 SDHB 0.374561571 0.688 0.279 3.89E-71 C5 DPP7 0.307634357 0.777 0.309 3.98E-71 C5 SLMO2 0.370681489 0.683 0.276 2.00E-70 C5 HNRNPF 0.495586543 0.84 0.407 2.00E-70 C5 CTSA 0.372940379 0.798 0.357 3.63E-70 C5 TMED10 0.459527187 0.854 0.398 4.10E-70 C5 TAF9 0.331153778 0.697 0.276 5.11E-70 C5 RAMP1 0.368531469 0.533 0.161 5.60E-70 C5 SSR3 0.456564879 0.85 0.389 6.42E-70 C5 DRAM2 0.30732445 0.582 0.206 7.43E-70 C5 ITPA 0.337803575 0.735 0.301 1.23E-69 C5 NSMCE1 0.263703126 0.601 0.209 1.24E-69 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

DPM2 0.30639761 0.692 0.27 1.31E-69 C5 MANBAL 0.253797677 0.538 0.176 1.59E-69 C5 SMDT1 0.39416737 0.812 0.376 1.84E-69 C5 ERP44 0.43438731 0.728 0.307 3.11E-69 C5 ACTG1 0.737203156 0.998 0.857 4.17E-69 C5 C14orf1 0.347965294 0.641 0.236 6.36E-69 C5 HAX1 0.335312043 0.688 0.277 1.60E-68 C5 TMX2 0.327909916 0.61 0.224 1.77E-68 C5 HTATIP2 0.404289483 0.77 0.336 2.01E-68 C5 CHCHD3 0.276952214 0.533 0.177 3.63E-68 C5 ENO1 0.638086935 0.92 0.572 4.23E-68 C5 UROS 0.267124593 0.54 0.182 1.24E-67 C5 MRPS33 0.355459021 0.749 0.318 1.35E-67 C5 MED30 0.273047972 0.601 0.211 3.68E-67 C5 REEP5 0.323446098 0.711 0.29 3.70E-67 C5 CHCHD1 0.29788581 0.697 0.28 3.92E-67 C5 DPM1 0.312028 0.615 0.227 7.35E-67 C5 HMGN2 0.602898855 0.876 0.447 1.30E-66 C5 EIF3F 0.499367643 0.866 0.416 2.10E-66 C5 MRPL13 0.405038034 0.791 0.331 3.05E-66 C5 PSMA3 0.468334336 0.793 0.362 4.13E-66 C5 CYB5B 0.422591144 0.643 0.256 5.10E-66 C5 CAPZB 0.405173855 0.786 0.373 7.00E-66 C5 TCEB1 0.476227926 0.862 0.427 7.98E-66 C5 EEF1B2 0.551862072 0.984 0.752 9.69E-66 C5 SDHD 0.347506827 0.709 0.292 1.00E-65 C5 NDUFA5 0.319675985 0.742 0.311 4.54E-65 C5 DERL1 0.285139903 0.606 0.225 6.05E-65 C5 MPC2 0.456143701 0.864 0.415 6.94E-65 C5 RNF114 0.383330362 0.664 0.279 9.93E-65 C5 PABPC1 0.524244652 0.998 0.799 1.07E-64 C5 POLR2F 0.303360306 0.7 0.281 1.52E-64 C5 NDUFC2 0.483410691 0.908 0.485 2.04E-64 C5 AIG1 0.260904036 0.488 0.157 3.25E-64 C5 TCEA1 0.356205301 0.791 0.351 4.45E-64 C5 POLR1D 0.423470957 0.836 0.414 4.71E-64 C5 TSTD1 0.404417362 0.838 0.394 1.41E-63 C5 ZNF593 0.365982388 0.789 0.364 1.68E-63 C5 DCTPP1 0.327003928 0.725 0.295 1.93E-63 C5 MRPS25 0.271014659 0.662 0.253 5.10E-63 C5 FAM204A 0.252033713 0.561 0.2 7.82E-63 C5 NPM1 0.568904019 0.937 0.572 9.33E-63 C5 HSPA8 0.605138493 0.934 0.568 1.32E-62 C5 ESD 0.356382509 0.728 0.296 2.35E-62 C5 ADCK3 0.250907394 0.542 0.185 2.65E-62 C5 PPAP2C 0.429465652 0.777 0.373 4.14E-62 C5 APOA1BP 0.313722619 0.725 0.305 5.07E-62 C5 NPC2 0.489159852 0.913 0.481 1.06E-61 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

ZNF706 0.51083112 0.901 0.491 1.99E-61 C5 ENY2 0.450616798 0.92 0.531 3.83E-61 C5 ZNF511 0.299625903 0.552 0.2 7.87E-61 C5 NUDC 0.379544478 0.786 0.368 2.07E-60 C5 C9orf142 0.339418446 0.775 0.349 2.53E-60 C5 MYC 0.342632759 0.671 0.264 2.78E-60 C5 LSM3 0.38940311 0.796 0.368 6.15E-60 C5 PSAP 0.427910726 0.911 0.509 6.86E-60 C5 SCCPDH 0.281513363 0.594 0.224 8.61E-60 C5 ILF2 0.35766125 0.718 0.302 8.84E-60 C5 ATP6V0E1 0.432493847 0.859 0.44 1.09E-59 C5 CHMP4C 0.301087183 0.669 0.277 1.29E-59 C5 NFIA 0.250143675 0.507 0.168 1.48E-59 C5 PARK7 0.448654503 0.859 0.439 1.95E-59 C5 TXN2 0.311663281 0.77 0.355 2.23E-59 C5 APEX1 0.391013515 0.784 0.356 3.06E-59 C5 CCT7 0.363215403 0.73 0.312 9.76E-59 C5 ARPC4 0.294000542 0.681 0.287 9.88E-59 C5 CNBP 0.444102935 0.843 0.404 1.25E-58 C5 YIF1A 0.376853395 0.803 0.359 1.30E-58 C5 NSFL1C 0.277121604 0.646 0.262 1.33E-58 C5 PFDN2 0.446248095 0.836 0.421 2.05E-58 C5 HIGD2A 0.366410394 0.817 0.397 2.23E-58 C5 TMEM9B 0.283216634 0.57 0.219 2.32E-58 C5 NOB1 0.30805733 0.61 0.241 3.46E-58 C5 ARPC1A 0.390097958 0.796 0.365 6.29E-58 C5 SELM 0.369765969 0.472 0.157 7.05E-58 C5 GDI2 0.351859615 0.728 0.321 8.27E-58 C5 GS1-251I9.4 0.290068401 0.751 0.342 1.84E-57 C5 ATP5C1 0.49692243 0.831 0.419 2.13E-57 C5 GNB2L1 0.448245643 0.995 0.861 2.55E-57 C5 NDUFAB1 0.415176259 0.869 0.419 4.95E-57 C5 TSPAN15 0.252508787 0.615 0.243 5.56E-57 C5 DAP3 0.274592725 0.676 0.284 5.88E-57 C5 ALG5 0.314828091 0.674 0.277 8.58E-57 C5 MGST3 0.592561783 0.908 0.533 8.59E-57 C5 MRPL41 0.448687774 0.932 0.551 2.46E-56 C5 MRPL48 0.254884347 0.577 0.22 2.51E-56 C5 TMEM219 0.335448873 0.831 0.401 2.75E-56 C5 PRR15L 0.343388308 0.697 0.299 5.05E-56 C5 SAR1A 0.31765106 0.624 0.259 8.50E-56 C5 PYURF 0.264669164 0.681 0.281 1.07E-55 C5 WASF2 0.317081132 0.707 0.308 1.63E-55 C5 ACP1 0.365250988 0.843 0.402 1.94E-55 C5 SERBP1 0.454566922 0.923 0.552 2.17E-55 C5 MEAF6 0.250719901 0.678 0.273 3.41E-55 C5 KIF5B 0.508449205 0.803 0.42 1.11E-54 C5 CCT3 0.411282422 0.864 0.434 1.63E-54 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

JTB 0.458989656 0.911 0.513 2.69E-54 C5 GABARAPL2 0.331719802 0.782 0.352 2.72E-54 C5 YTHDF2 0.26498706 0.622 0.255 9.85E-54 C5 TMED9 0.354611461 0.775 0.374 1.19E-53 C5 FAM162A 0.381935909 0.808 0.403 1.85E-53 C5 SH3YL1 0.357058946 0.775 0.352 6.75E-53 C5 CHCHD7 0.281259905 0.756 0.346 6.76E-53 C5 ATP5H 0.44306098 0.913 0.508 9.77E-53 C5 TPI1 0.500937522 0.967 0.69 1.33E-52 C5 ADRM1 0.361372679 0.784 0.387 1.98E-52 C5 NDUFA8 0.351952549 0.674 0.307 2.37E-52 C5 SYPL1 0.299488902 0.716 0.32 2.66E-52 C5 CYBA 0.413988333 0.984 0.774 3.39E-52 C5 SEC61B 0.475812464 0.927 0.523 4.38E-52 C5 MRPL11 0.29512817 0.678 0.294 6.06E-52 C5 AHCY 0.311338772 0.648 0.282 7.44E-52 C5 APH1A 0.318123123 0.763 0.35 1.17E-51 C5 MGST1 0.400339742 0.822 0.368 2.02E-51 C5 GSTA1 0.409893666 0.589 0.229 2.34E-51 C5 PHB2 0.328950255 0.763 0.357 2.86E-51 C5 COPZ1 0.290356417 0.669 0.295 3.01E-51 C5 PSMD3 0.264105632 0.664 0.288 6.55E-51 C5 SNRPB 0.463440821 0.899 0.494 8.44E-51 C5 MRP63 0.345677752 0.862 0.456 1.53E-50 C5 CMPK1 0.410283794 0.84 0.425 1.90E-50 C5 PHPT1 0.373777752 0.908 0.521 1.92E-50 C5 NDUFA10 0.285676806 0.73 0.34 2.36E-50 C5 PPP1R1B 0.377823861 0.826 0.411 2.38E-50 C5 C6orf48 0.295927266 0.735 0.337 2.90E-50 C5 LEPROT 0.253699103 0.519 0.202 3.22E-50 C5 POMP 0.444472805 0.908 0.506 3.28E-50 C5 CDC42 0.447263551 0.857 0.474 3.44E-50 C5 SAP18 0.387163199 0.92 0.542 3.45E-50 C5 ERGIC3 0.405274094 0.885 0.498 3.75E-50 C5 TOMM20 0.42031847 0.85 0.462 4.20E-50 C5 C9orf16 0.410966465 0.934 0.572 5.67E-50 C5 HMGN3 0.284565756 0.65 0.277 5.95E-50 C5 SF3B14 0.409297957 0.847 0.442 7.08E-50 C5 RPN2 0.399400262 0.808 0.404 9.49E-50 C5 UBE2I 0.293311538 0.756 0.352 1.10E-49 C5 CLNS1A 0.290705937 0.714 0.307 1.36E-49 C5 CPNE3 0.29719504 0.674 0.294 1.60E-49 C5 MRPS26 0.25179851 0.711 0.32 1.90E-49 C5 MRPS34 0.333963545 0.843 0.43 3.52E-49 C5 ARRDC1 0.262912186 0.695 0.314 4.99E-49 C5 COA4 0.316688416 0.779 0.374 6.25E-49 C5 LINC00493 0.305576748 0.859 0.435 7.49E-49 C5 SIVA1 0.322291358 0.761 0.36 9.85E-49 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

CD47 0.349230172 0.681 0.305 1.38E-48 C5 ANXA4 0.488147165 0.911 0.522 1.38E-48 C5 FKBP4 0.269842494 0.669 0.295 1.45E-48 C5 MLF2 0.306011105 0.718 0.339 9.78E-48 C5 OSTC 0.328086521 0.763 0.353 1.14E-47 C5 HINT1 0.420635068 0.958 0.634 1.88E-47 C5 LACTB2 0.278612118 0.65 0.29 3.01E-47 C5 IMP4 0.255632582 0.671 0.308 3.96E-47 C5 MRPL50 0.258929564 0.61 0.258 4.00E-47 C5 VDAC1 0.42671572 0.899 0.504 1.09E-46 C5 TMEM141 0.321609754 0.824 0.427 3.10E-46 C5 EBNA1BP2 0.279573437 0.662 0.297 3.13E-46 C5 NAP1L1 0.347247552 0.601 0.261 8.02E-46 C5 DDX21 0.361150806 0.894 0.527 1.22E-45 C5 NDUFA6 0.299968779 0.8 0.41 1.31E-45 C5 AP2M1 0.3447242 0.735 0.368 1.66E-45 C5 MRFAP1 0.265324324 0.714 0.324 1.85E-45 C5 EIF6 0.397918271 0.904 0.505 2.01E-45 C5 NUTF2 0.298417845 0.735 0.343 3.65E-45 C5 RAB25 0.354557834 0.822 0.408 5.24E-45 C5 DPY30 0.253179687 0.746 0.345 6.02E-45 C5 COX8A 0.450080672 0.972 0.701 1.17E-44 C5 SLC3A2 0.369458422 0.69 0.32 1.21E-44 C5 LYPLA1 0.276649354 0.697 0.323 1.31E-44 C5 EIF5 0.313864722 0.862 0.455 6.38E-44 C5 UBE2N 0.255213586 0.575 0.247 6.71E-44 C5 PSMB7 0.375672704 0.822 0.43 1.71E-43 C5 SRPRB 0.256021784 0.587 0.254 2.26E-43 C5 TMEM14B 0.276225446 0.791 0.368 2.27E-43 C5 NHP2L1 0.341660548 0.869 0.47 3.42E-43 C5 EIF3A 0.361932743 0.824 0.447 6.92E-43 C5 COA3 0.334988137 0.805 0.413 7.64E-43 C5 CALM2 0.448727972 0.96 0.68 1.04E-42 C5 HIGD1A 0.262413932 0.66 0.316 1.86E-42 C5 HM13 0.261969269 0.716 0.345 2.00E-42 C5 PTGES3 0.343023905 0.84 0.436 3.09E-42 C5 SUCLG1 0.293085948 0.735 0.356 7.72E-42 C5 DECR1 0.283908761 0.744 0.345 1.13E-41 C5 HSPA1A 0.40614706 0.791 0.415 1.36E-41 C5 C8orf59 0.375155345 0.871 0.477 2.34E-41 C5 NME1 0.338816609 0.775 0.377 2.38E-41 C5 C14orf166 0.340850911 0.819 0.424 3.07E-41 C5 TPD52 0.436702174 0.885 0.532 9.44E-41 C5 EIF3K 0.375256026 0.951 0.59 2.92E-40 C5 C10orf10 0.292472935 0.35 0.108 3.51E-40 C5 RSL24D1 0.260785021 0.751 0.357 5.37E-40 C5 C14orf2 0.333945542 0.972 0.703 6.07E-40 C5 PGAM1 0.29221893 0.695 0.343 6.08E-40 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

PTMA 0.370959981 1 0.958 9.93E-40 C5 AUP1 0.297816528 0.843 0.459 1.17E-39 C5 ANXA11 0.39530443 0.84 0.488 1.43E-39 C5 IDH2 0.341009684 0.805 0.407 2.11E-39 C5 CCNI 0.28527423 0.815 0.426 3.86E-39 C5 SNRPE 0.341705054 0.873 0.459 1.06E-38 C5 SSBP1 0.302760786 0.805 0.423 1.68E-38 C5 CIRBP 0.296194011 0.845 0.471 2.76E-38 C5 CKLF 0.257054466 0.617 0.285 4.59E-38 C5 RAD21 0.258722673 0.742 0.364 1.32E-37 C5 MANF 0.395522212 0.697 0.349 6.05E-37 C5 RPL37A 0.270480871 1 0.983 1.84E-35 C5 RPL27A 0.273652886 1 0.989 3.94E-35 C5 SNRPD1 0.322112798 0.89 0.492 6.10E-35 C5 SEC11A 0.264727046 0.805 0.385 7.26E-35 C5 RPL23A 0.277515712 1 0.943 7.81E-35 C5 PHB 0.309475288 0.815 0.47 2.09E-34 C5 DYNLRB1 0.251225493 0.829 0.456 4.45E-34 C5 PSMB3 0.294341443 0.904 0.492 5.20E-34 C5 SKP1 0.295971548 0.904 0.525 7.01E-34 C5 NDUFA4 0.361459193 0.977 0.689 4.43E-33 C5 H3F3A 0.331096505 0.995 0.815 6.08E-32 C5 KRTCAP2 0.252446722 0.885 0.498 1.59E-30 C5 PSMB1 0.272775946 0.871 0.464 5.77E-30 C5 YWHAZ 0.338866811 0.96 0.645 1.17E-29 C5 SLC25A5 0.314176 0.93 0.564 1.56E-29 C5 HSBP1 0.259600315 0.864 0.48 1.64E-29 C5 STMN1 0.373057507 0.462 0.203 3.24E-29 C5 SDF2L1 0.312839315 0.683 0.375 4.58E-29 C5 LAMTOR4 0.256415961 0.904 0.574 1.50E-27 C5 COMMD6 0.265453028 0.925 0.564 2.48E-27 C5 COX5A 0.325219773 0.951 0.629 7.87E-27 C5 PEBP1 0.317877207 0.932 0.635 8.90E-27 C5 HMGB1 0.307429385 0.979 0.711 1.60E-26 C5 CYCS 0.322740024 0.915 0.601 5.55E-26 C5 H2AFZ 0.339250759 0.739 0.418 1.51E-24 C5 IFI27 0.342840075 0.988 0.82 3.82E-24 C5 SLC25A3 0.340644592 0.908 0.586 4.90E-24 C5 HNRNPA1 0.300112485 0.977 0.725 7.51E-24 C5 CYC1 0.251663082 0.923 0.627 1.64E-23 C5 USMG5 0.29034595 0.946 0.701 3.08E-23 C5 REG1A 0.943285772 0.423 0.197 1.28E-22 C5 TSPAN8 0.3695604 0.972 0.772 2.95E-22 C5 DBI 0.282827706 0.939 0.656 4.12E-22 C5 TUBB4B 0.380931049 0.873 0.599 6.83E-21 C5 GDF15 0.25147878 0.655 0.367 1.61E-20 C5 CALR 0.272886416 0.911 0.645 2.71E-16 C5 HSPA5 0.256147182 0.824 0.535 5.99E-15 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368 BMJ Publishing Group Limited (BMJ) disclaims all liability and responsibility arising from any reliance Supplemental material placed on this supplemental material which has been supplied by the author(s) Gut

FOS 0.448309938 0.897 0.802 1.43E-13 C5 KLF6 0.258128887 0.789 0.615 1.13E-05 C5

Zhang M, et al. Gut 2021; 70:1–12. doi: 10.1136/gutjnl-2019-320368