Reduced Axonal Localization of a Caps2 Splice Variant Impairs Axonal Release of BDNF and Causes Autistic-Like Behavior in Mice

Total Page:16

File Type:pdf, Size:1020Kb

Reduced Axonal Localization of a Caps2 Splice Variant Impairs Axonal Release of BDNF and Causes Autistic-Like Behavior in Mice Reduced axonal localization of a Caps2 splice variant impairs axonal release of BDNF and causes autistic-like behavior in mice Tetsushi Sadakataa,b,1, Yo Shinodab,c, Megumi Okaa, Yukiko Sekinec, Yumi Satoc, Chihiro Sarutac, Hideki Miwad, Mika Tanakae, Shigeyoshi Itoharae, and Teiichi Furuichib,c,1 aAdvanced Scientific Research Leaders Development Unit, Gunma University, Maebashi, Gunma 371-8511, Japan; bJapan Science and Technology Agency (JST)/Core Research for Evolutional Science and Technology (CREST), Kawaguchi, Saitama 332-0012, Japan; cDepartment of Applied Biological Science, Tokyo University of Science, Noda, Chiba 278-8510, Japan; dDepartment of Genetic and Behavioral Neuroscience, Gunma University Graduate School of Medicine, Maebashi, Gunma 371-8511, Japan; and eLaboratory for Behavioral Genetics, RIKEN Brain Science Institute, Wako, Saitama 351-0198, Japan Edited* by Masao Ito, RIKEN Brain Science Institute, Wako, Japan, and approved October 30, 2012 (received for review June 14, 2012) + Ca2 -dependent activator protein for secretion 2 (CAPS2 or CADPS2) BDNF secretion, affecting proper brain circuit development and/ potently promotes the release of brain-derived neurotrophic factor or function, and thereby contributing to an increased susceptibility (BDNF). A rare splicing form of CAPS2 with deletion of exon3 (dex3) to autism. Our results suggest that disturbance of the alternative was identified to be overrepresented in some patients with autism. splicing patterns of Caps2 can directly affect normal brain de- Here, we generated Caps2-dex3miceandverified a severe impair- velopment and function and could contribute to a genetic back- ment in axonal Caps2-dex3 localization, contributing to a reduction ground of autism susceptibility. in BDNF release from axons. In addition, circuit connectivity, mea- sured by spine and interneuron density, was diminished globally. Results The collective effect of reduced axonal BDNF release during devel- Generation of a Mouse Line Expressing Exon 3-Skipped Caps2 (dex3). opment was a striking and selective repertoire of deficits in social- To clarify the in vivo effect of Caps2 exon 3 skipping, we used and anxiety-related behaviors. Together, these findings represent a Cre/loxP system to generate a mouse line carrying a deletion of a unique mouse model of a molecular mechanism linking BDNF- exon 3 (which encodes 111 amino acids) of the Caps2 gene, NEUROSCIENCE mediated coordination of brain development to autism-related which expresses the exon 3-skipped Caps2 (Caps2-dex3) protein. behaviors and patient genotype. A conditional Caps2-dex3 allele was generated by gene targeting in embryonic stem cells (Fig. S1A). The resultant homozygotes, psychiatry | mental disorder | dense-core vesicle | exocytosis Δ Δ called Caps2 ex3/ ex3 mice, produced a Caps2-immunoreactive protein with a slightly lower molecular weight than that of wild 2+ Δ Δ a -dependent activator protein for secretion 2 (CAPS2 or types (Fig. S1B). The Caps2 ex3/ ex3 mice in standard breeding CCADPS2) is a member of the CAPS protein family that reg- cages exhibited no differences in life expectancy from control fi Δex3/Δex3 ulates the traf cking of dense-core vesicles by binding both mice, and both male and female Caps2 mice had normal – phosphoinositides and dense-core vesicles (1 5). We initially reproductive ability. identified mouse Caps2 as a potent factor promoting the release of brain-derived neurotrophic factor (BDNF) during cerebellar de- Dex3 Mice Show a Severe Reduction in Caps2 Immunoreactivity in the velopment (6, 7). Our subsequent knockout mouse study showed Projection Areas of Caps2-Expressing Neurons. We first examined that Caps2 not only plays a role in neuronal development of the the intracellular localization of dex3 protein in vivo using an anti- cerebrum and hippocampus as well as the cerebellum, but that it is Caps2 antibody. In the cerebellum, wild-type Caps2 protein was also associated with social interaction, anxiety, and maternal and mostly localized in the granule cell axons (parallel fibers) circadian behaviors in mice (7, 8). We also showed that the ex- extending into the molecular layer (Fig. 1 A and C), whereas dex3 CAPS2 pression of an exon 3-skipped (or -spliced out) form of protein was not localized in the axons and instead accumulated in CAPS2 (designated -dex3) (8), which is now known to be a rare the cell somas in the internal granule cell layer (Fig. 1 B and D). In alternative splicing variant (9, 10), is increased in a subgroup of the cerebrum of wild-type mice, diffuse signal was widely distrib- patients with autism and is not properly localized in axons (8). uted over the cortical layers, and intense signals were observed in Thus, neurons overexpressing dex3 may fail to coordinate local the soma of a subset of interneurons scattered throughout layers BDNF release from axons properly (8, 9), resulting in improper E Caps2Δex3/Δex3 CAPS2 II/III and V (Fig. 1 ). Interestingly, in mice, the brain development and function. The human gene locus diffuse signal was almost absent and mostly localized to cell somas (7q31.32) is intriguingly located within the autism susceptibility – in layer V, in addition to some intense signaling seen in inter- locus 1 (AUTS1) (11) on chromosome 7q31 q33, one of several neurons in layers II/III and V (Fig. 1F). This supported our hy- susceptibility loci for autism (12). Moreover, an association of pothesis that full-length Caps2 protein [exon3-plus; the dominant CAPS2 with autism has been suggested recently, not only by the form in mouse (27) and human (8) brains] can be transported into presence of copy number variations in the CAPS2 gene in autistic axons, whereas dex3 protein (exon3-minus) cannot (8). patients (13–15), but also by decreased transcription of CAPS2 in the brains of people with autism (16). Thus, clarifying the bi- ological significance of dex3 expression is an important step in Author contributions: T.S. and T.F. designed research; T.S., Y. Shinoda, M.O., Y. Sekine, elucidating the association of CAPS2 with brain circuit de- Y. Sato, and C.S. performed research; T.S., Y. Shinoda, H.M., M.T., and S.I. analyzed data; velopment and behaviors related to autism. and T.S. and T.F. wrote the paper. The potential molecular risk factors for autism susceptibility The authors declare no conflict of interest. – have been increasingly reported (17 26) but are poorly charac- *This Direct Submission article had a prearranged editor. terized in animal models. In this report, we generated a mouse 1To whom correspondence may be addressed. E-mail: [email protected] or sadakata-1024@ model expressing dex3 and analyzed the cellular and autistic-like umin.ac.jp. behavioral phenotypes of dex3 mice. Our results support the in- This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10. volvement of the rare dex3 form of Caps2 in defective axonal 1073/pnas.1210055109/-/DCSupplemental. www.pnas.org/cgi/doi/10.1073/pnas.1210055109 PNAS Early Edition | 1of6 Downloaded by guest on September 30, 2021 Fig. 1. Distribution of Caps2 immunoreactivity in the Δ Δ Caps2 ex3/ ex3 mouse cerebellum and neocortex. (A and B) Δ Δ Sagittal sections of P21 wild-type (A) and Caps2 ex3/ ex3 (B) cerebellum were immunolabeled with an anti-Caps2 antibody. (Scale bars, 300 μm.) (C and D) Sagittal sections of P21 wild- type (C)andCaps2Δex3/Δex3 (D) cerebella were immunolabeled with anti-Caps2 antibody. Immunosignal intensity of red dot- ted lines is shown by black lines in the graphs. Signal intensity from the other three images is shown in colored lines. M, molecular layer; P, Purkinje cell layer; I, internal granular layer. (Scale bars, 50 μm.) (E and F) Sagittal sections of P21 wild-type (E) and Caps2Δex3/Δex3 (F) neocortex were immunolabeled with an anti-Caps2 antibody. II/III, IV, and V represent cortical layers II/III, IV, and V, respectively. Areas outlined by dotted squares are shown in Insets. (Scale bars, 100 μm.) In the wild-type mouse hippocampus, Caps2 protein was depolarization-induced) BDNF–GFP release from transfected expressed in dentate gyrus (DG) granule cells and cornu neurons was evaluated by immunostaining with an anti-GFP ammonis region 1 (CA1) pyramidal neurons in addition to antibody before cell permeabilization and by counting immu- a subset of interneurons scattered in the DG and CA1 regions nopositive puncta on axons (Fig. 2O), as previously reported (28), as shown in Fig. S2A. The latter immunosignal was strong (29–31). The number of cell-surface (i.e., released) BDNF–GFP in the cell soma, whereas Caps2 expressed in DG granule cells puncta in KCl-stimulated cells was normalized to that in unsti- Δ Δ was localized in axons of the stratum lucidum. In Caps2 ex3/ ex3 mulated control cells. A graded increase in KCl concentration hippocampus, diffuse signal of the stratum lucidum was almost revealed an activity (depolarization)-dependent release of Δ Δ diminished, as shown in Fig. S2 B, D, and E. BDNF–GFP from the axons of wild-type but not Caps2 ex3/ ex3 cells (Fig. 2P). These results showed that regulated release of Δ Δ Decreased Axonal Localization of BDNF in dex3 Neurons. We ana- BDNF was impaired in the axons of Caps2 ex3/ ex3 neurons. lyzed the effect of dex3 expression on the axonal localization of BDNF immunoreactivity using primary-cultured hippocampal Deficits in Hippocampal and Cortical Interneurons and Dendritic Δ Δ calbindin-positive granule cells from wild-type and Caps2 ex3/ ex3 Spines in dex3 Mice. There is a report showing disrupted archi- mice. In wild-type neurons (Fig. 2 A–C), Caps2-immunopositive tecture in the gamma-aminobutyric acid (GABA)ergic in- puncta were localized in the axon, as shown by colocalization with terneuron circuit of the neocortex in autism (32). It was also Δ Δ the axonal marker Tau. However, in Caps2 ex3/ ex3 neurons, shown that differentiation of a subset of neocortical parvalbu- Caps2-positive puncta were decreased in the axons (Fig.
Recommended publications
  • Primate Specific Retrotransposons, Svas, in the Evolution of Networks That Alter Brain Function
    Title: Primate specific retrotransposons, SVAs, in the evolution of networks that alter brain function. Olga Vasieva1*, Sultan Cetiner1, Abigail Savage2, Gerald G. Schumann3, Vivien J Bubb2, John P Quinn2*, 1 Institute of Integrative Biology, University of Liverpool, Liverpool, L69 7ZB, U.K 2 Department of Molecular and Clinical Pharmacology, Institute of Translational Medicine, The University of Liverpool, Liverpool L69 3BX, UK 3 Division of Medical Biotechnology, Paul-Ehrlich-Institut, Langen, D-63225 Germany *. Corresponding author Olga Vasieva: Institute of Integrative Biology, Department of Comparative genomics, University of Liverpool, Liverpool, L69 7ZB, [email protected] ; Tel: (+44) 151 795 4456; FAX:(+44) 151 795 4406 John Quinn: Department of Molecular and Clinical Pharmacology, Institute of Translational Medicine, The University of Liverpool, Liverpool L69 3BX, UK, [email protected]; Tel: (+44) 151 794 5498. Key words: SVA, trans-mobilisation, behaviour, brain, evolution, psychiatric disorders 1 Abstract The hominid-specific non-LTR retrotransposon termed SINE–VNTR–Alu (SVA) is the youngest of the transposable elements in the human genome. The propagation of the most ancient SVA type A took place about 13.5 Myrs ago, and the youngest SVA types appeared in the human genome after the chimpanzee divergence. Functional enrichment analysis of genes associated with SVA insertions demonstrated their strong link to multiple ontological categories attributed to brain function and the disorders. SVA types that expanded their presence in the human genome at different stages of hominoid life history were also associated with progressively evolving behavioural features that indicated a potential impact of SVA propagation on a cognitive ability of a modern human.
    [Show full text]
  • Accurate Breakpoint Mapping in Apparently Balanced Translocation Families with Discordant Phenotypes Using Whole Genome Mate-Pair Sequencing
    Accurate Breakpoint Mapping in Apparently Balanced Translocation Families with Discordant Phenotypes Using Whole Genome Mate-Pair Sequencing Aristidou, Constantia; Koufaris, Costas; Theodosiou, Athina; Bak, Mads; Mehrjouy, Mana M; Behjati, Farkhondeh; Tanteles, George; Christophidou-Anastasiadou, Violetta; Tommerup, Niels; Sismani, Carolina Published in: PLOS ONE DOI: 10.1371/journal.pone.0169935 Publication date: 2017 Document version Publisher's PDF, also known as Version of record Document license: CC BY Citation for published version (APA): Aristidou, C., Koufaris, C., Theodosiou, A., Bak, M., Mehrjouy, M. M., Behjati, F., Tanteles, G., Christophidou- Anastasiadou, V., Tommerup, N., & Sismani, C. (2017). Accurate Breakpoint Mapping in Apparently Balanced Translocation Families with Discordant Phenotypes Using Whole Genome Mate-Pair Sequencing. PLOS ONE, 12(1), [e0169935]. https://doi.org/10.1371/journal.pone.0169935 Download date: 29. sep.. 2021 RESEARCH ARTICLE Accurate Breakpoint Mapping in Apparently Balanced Translocation Families with Discordant Phenotypes Using Whole Genome Mate-Pair Sequencing Constantia Aristidou1,2, Costas Koufaris1, Athina Theodosiou1, Mads Bak3, Mana M. Mehrjouy3, Farkhondeh Behjati4, George Tanteles5, Violetta Christophidou- Anastasiadou6, Niels Tommerup3, Carolina Sismani1,2* a1111111111 a1111111111 1 Department of Cytogenetics and Genomics, The Cyprus Institute of Neurology and Genetics, Nicosia, Cyprus, 2 The Cyprus School of Molecular Medicine, The Cyprus Institute of Neurology and Genetics, a1111111111
    [Show full text]
  • Identification of Potential Key Genes and Pathway Linked with Sporadic Creutzfeldt-Jakob Disease Based on Integrated Bioinformatics Analyses
    medRxiv preprint doi: https://doi.org/10.1101/2020.12.21.20248688; this version posted December 24, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission. Identification of potential key genes and pathway linked with sporadic Creutzfeldt-Jakob disease based on integrated bioinformatics analyses Basavaraj Vastrad1, Chanabasayya Vastrad*2 , Iranna Kotturshetti 1. Department of Biochemistry, Basaveshwar College of Pharmacy, Gadag, Karnataka 582103, India. 2. Biostatistics and Bioinformatics, Chanabasava Nilaya, Bharthinagar, Dharwad 580001, Karanataka, India. 3. Department of Ayurveda, Rajiv Gandhi Education Society`s Ayurvedic Medical College, Ron, Karnataka 562209, India. * Chanabasayya Vastrad [email protected] Ph: +919480073398 Chanabasava Nilaya, Bharthinagar, Dharwad 580001 , Karanataka, India NOTE: This preprint reports new research that has not been certified by peer review and should not be used to guide clinical practice. medRxiv preprint doi: https://doi.org/10.1101/2020.12.21.20248688; this version posted December 24, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission. Abstract Sporadic Creutzfeldt-Jakob disease (sCJD) is neurodegenerative disease also called prion disease linked with poor prognosis. The aim of the current study was to illuminate the underlying molecular mechanisms of sCJD. The mRNA microarray dataset GSE124571 was downloaded from the Gene Expression Omnibus database. Differentially expressed genes (DEGs) were screened.
    [Show full text]
  • REVIEW ARTICLE the Genetics of Autism
    REVIEW ARTICLE The Genetics of Autism Rebecca Muhle, BA*; Stephanie V. Trentacoste, BA*; and Isabelle Rapin, MD‡ ABSTRACT. Autism is a complex, behaviorally de- tribution of a few well characterized X-linked disorders, fined, static disorder of the immature brain that is of male-to-male transmission in a number of families rules great concern to the practicing pediatrician because of an out X-linkage as the prevailing mode of inheritance. The astonishing 556% reported increase in pediatric preva- recurrence rate in siblings of affected children is ϳ2% to lence between 1991 and 1997, to a prevalence higher than 8%, much higher than the prevalence rate in the general that of spina bifida, cancer, or Down syndrome. This population but much lower than in single-gene diseases. jump is probably attributable to heightened awareness Twin studies reported 60% concordance for classic au- and changing diagnostic criteria rather than to new en- tism in monozygotic (MZ) twins versus 0 in dizygotic vironmental influences. Autism is not a disease but a (DZ) twins, the higher MZ concordance attesting to ge- syndrome with multiple nongenetic and genetic causes. netic inheritance as the predominant causative agent. By autism (the autistic spectrum disorders [ASDs]), we Reevaluation for a broader autistic phenotype that in- mean the wide spectrum of developmental disorders cluded communication and social disorders increased characterized by impairments in 3 behavioral domains: 1) concordance remarkably from 60% to 92% in MZ twins social interaction; 2) language, communication, and and from 0% to 10% in DZ pairs. This suggests that imaginative play; and 3) range of interests and activities.
    [Show full text]
  • CADPS2 (NM 001009571) Human Tagged ORF Clone – RC220606
    OriGene Technologies, Inc. 9620 Medical Center Drive, Ste 200 Rockville, MD 20850, US Phone: +1-888-267-4436 [email protected] EU: [email protected] CN: [email protected] Product datasheet for RC220606 CADPS2 (NM_001009571) Human Tagged ORF Clone Product data: Product Type: Expression Plasmids Product Name: CADPS2 (NM_001009571) Human Tagged ORF Clone Tag: Myc-DDK Symbol: CADPS2 Synonyms: CAPS2 Vector: pCMV6-Entry (PS100001) E. coli Selection: Kanamycin (25 ug/mL) Cell Selection: Neomycin ORF Nucleotide >RC220606 representing NM_001009571 Sequence: Red=Cloning site Blue=ORF Green=Tags(s) TTTTGTAATACGACTCACTATAGGGCGGCCGGGAATTCGTCGACTGGATCCGGTACCGAGGAGATCTGCC GCCGCGATCGCC ATGCTGGACCCGTCTTCCAGCGAAGAGGAGTCGGACGAGGGGCTGGAAGAGGAAAGCCGCGATGTGCTGG TGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGGCGGCGGGACGCGCCGGGGCG CGCGGGCGGCGGCGGCGCGGCCAGATCTGTGAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACGAG CCCCAGCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCGCCTGCAGCTCTACGTCTTCGTCGTGAGGT GCATCGCGTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCCCGGAGGCAGCAGAAGCTTAACAAACA ACAGTTGCAGTTACTGAAAGAACGGTTCCAGGCCTTCCTCAATGGGGAAACCCAAATTGTAGCTGACGAA GCATTTTGCAACGCAGTTCGGAGTTATTATGAGGTTTTTCTAAAGAGTGACCGAGTGGCCAGAATGGTAC AGAGTGGAGGGTGTTCTGCTAATGACTTCAGAGAAGTATTTAAGAAAAACATAGAAAAACGTGTGCGGAG TTTGCCAGAAATAGATGGCTTGAGCAAAGAGACAGTGTTGAGCTCATGGATAGCCAAATATGATGCCATT TACAGAGGTGAAGAGGACTTGTGCAAACAGCCAAATAGAATGGCCCTAAGTGCAGTGTCTGAACTTATTC TGAGCAAGGAACAACTCTATGAAATGTTTCAGCAGATTCTGGGTATTAAAAAACTGGAACACCAGCTCCT TTATAATGCATGTCAGCTGGATAACGCAGATGAACAAGCAGCCCAGATCAGAAGGGAACTTGATGGCCGG CTGCAATTGGCAGATAAAATGGCAAAGGAAAGAAAATTCCCCAAATTTATAGCAAAAGATATGGAGAATA
    [Show full text]
  • Impaired Secretion of Brain-Derived Neurotrophic Factor and Neuropsy- Chiatric Diseases Naoki Adachi and Hiroshi Kunugi*
    The Open Neuroscience Journal, 2008, 2, 59-64 59 Open Access Impaired Secretion of Brain-Derived Neurotrophic Factor and Neuropsy- chiatric Diseases Naoki Adachi and Hiroshi Kunugi* Department of Mental Disorder Research, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Tokyo 187-8502, 4-1-1, Ogawahigashi, Tokyo, 187-8502, Japan Abstract: Recent studies have elucidated mechanisms of brain-derived neurotrophic factor (BDNF) secretion, and im- paired secretion of BDNF may be involved in the pathogenesis of several neuropsychiatric diseases. The huntingtin gene, for example, has been shown to regulate vesicular transport of BDNF, which may play a role in the neurodegeneration present in Huntington's disease. In animal studies, mice lacking calcium-dependent activator protein for secretion 2 (CADPS2), which is involved in the activity-dependent release of BDNF, showed several phenotypes including autistic behavior. A single nucleotide polymorphism that results in an amino-acid change (Val66Met) in the BDNF gene has been shown to cause a decline in the function of BDNF vesicular sorting and has been reported to be associated with behavioral and intermediate phenotypes (e.g., episodic memory) in humans. In this review, we introduce recent progress in the mo- lecular mechanisms of BDNF secretion and discuss its possible role in the pathophysiology and treatment of neuropsy- chiatric diseases. INTRODUCTION of transmembrane receptor proteins: the tyrosine kinase Trk (tropomyosin-related kinase) receptors and the low affinity Brain-derived neurotrophic factor (BDNF), a member of common neurotrophin receptor (p75NTR). Neurotrophins the neurotrophin family, has been implicated in a broad are expressed in a precursor form (pro-neurotrophins) and range of processes that are important for neuronal survival are proteolytically processed to a mature form.
    [Show full text]
  • Advances in Autism Genetics: on the Threshold of a New Neurobiology
    REVIEWS Advances in autism genetics: on the threshold of a new neurobiology Brett S. Abrahams and Daniel H. Geschwind Abstract | Autism is a heterogeneous syndrome defined by impairments in three core domains: social interaction, language and range of interests. Recent work has led to the identification of several autism susceptibility genes and an increased appreciation of the contribution of de novo and inherited copy number variation. Promising strategies are also being applied to identify common genetic risk variants. Systems biology approaches, including array-based expression profiling, are poised to provide additional insights into this group of disorders, in which heterogeneity, both genetic and phenotypic, is emerging as a dominant theme. Gene association studies Autistic disorder is the most severe end of a group of into the ASDs. This work, in concert with important A set of methods that is used neurodevelopmental disorders referred to as autism technical advances, made it possible to carry out the to determine the correlation spectrum disorders (ASDs), all of which share the com- first candidate gene association studies and resequenc- (positive or negative) between mon feature of dysfunctional reciprocal social interac- ing efforts in the late 1990s. Whole-genome linkage a defined genetic variant and a studies phenotype of interest. tion. A meta-analysis of ASD prevalence rates suggests followed, and were used to identify additional that approximately 37 in 10,000 individuals are affected1. loci of potential interest. Although
    [Show full text]
  • Molecular Mechanisms: Mutations Make Medley of Symptoms
    Spectrum | Autism Research News https://www.spectrumnews.org NEWS Molecular mechanisms: Mutations make medley of symptoms BY JESSICA WRIGHT 23 JANUARY 2013 Protein placement: A mutation in the autism-linked gene CAPS2 causes the protein (right) to accumulate in the cell bodies of neurons instead of travelling down their long projections. Two mutations in CAPS2, an autism-linked protein that promotes neuronal signaling, lead to different autism-like behaviors in mice, according to two studies published in the past two months1, 2. Both mutations have been seen in individuals with autism. CAPS2, also known as CADPS2, promotes the release of chemical messengers at neuronal junctions. These messengers include the growth factor brain-derived neurotrophic factor (BDNF), which has been linked to autism. The CAPS2 gene is within the 7q31, or AUTS1, chromosomal region. One copy of this region is sometimes missing in people with autism. A 2007 study found another autism-linked mutation in CAPS2 called CAPS2-dex3. This mutation leads to a version of the protein that lacks 111 amino acids3. The protein accumulates in the cell bodies of neurons instead of travelling down their long projections. Mice lacking both copies of CAPS2 are less likely than controls to interact with other mice and are more anxious, according to that study. The mice also have altered sleeping patterns and impaired BDNF signaling. 1 / 2 Spectrum | Autism Research News https://www.spectrumnews.org In the first new study, published in the January issue of FEBS Letters, the same team engineered mice lacking only one copy of CAPS2, which better mimics the AUTS1 deletion seen in people.
    [Show full text]
  • An Integrative Analysis of Non-Coding Regulatory DNA Variations Associated with Autism Spectrum Disorder
    Molecular Psychiatry (2019) 24:1707–1719 https://doi.org/10.1038/s41380-018-0049-x ARTICLE An integrative analysis of non-coding regulatory DNA variations associated with autism spectrum disorder 1,2 2,3,4 2 2 1 Sarah M. Williams ● Joon Yong An ● Janette Edson ● Michelle Watts ● Valentine Murigneux ● 5,6 7 8 1 Andrew J. O. Whitehouse ● Colin J. Jackson ● Mark A. Bellgrove ● Alexandre S. Cristino ● Charles Claudianos 2,9 Received: 15 October 2016 / Revised: 16 January 2018 / Accepted: 19 February 2018 / Published online: 27 April 2018 © The Author(s) 2018. This article is published with open access Abstract A number of genetic studies have identified rare protein-coding DNA variations associated with autism spectrum disorder (ASD), a neurodevelopmental disorder with significant genetic etiology and heterogeneity. In contrast, the contributions of functional, regulatory genetic variations that occur in the extensive non-protein-coding regions of the genome remain poorly understood. Here we developed a genome-wide analysis to identify the rare single nucleotide variants (SNVs) that occur in non-coding regions and determined the regulatory function and evolutionary conservation of these variants. Using publicly fi 1234567890();,: 1234567890();,: available datasets and computational predictions, we identi ed SNVs within putative regulatory regions in promoters, transcription factor binding sites, and microRNA genes and their target sites. Overall, we found that the regulatory variants in ASD cases were enriched in ASD-risk genes and genes involved in fetal neurodevelopment. As with previously reported coding mutations, we found an enrichment of the regulatory variants associated with dysregulation of neurodevelopmental and synaptic signaling pathways.
    [Show full text]
  • The Role of Neurotrophic Factors in Autism T Nickl-Jockschat and TM Michel Department of Psychiatry and Psychotherapy, RWTH Aachen University, Aachen, Germany
    Molecular Psychiatry (2011) 16, 478–490 & 2011 Macmillan Publishers Limited All rights reserved 1359-4184/11 www.nature.com/mp FEATURE REVIEW The role of neurotrophic factors in autism T Nickl-Jockschat and TM Michel Department of Psychiatry and Psychotherapy, RWTH Aachen University, Aachen, Germany Autism spectrum disorders (ASDs) are pervasive developmental disorders that frequently involve a triad of deficits in social skills, communication and language. For the underlying neurobiology of these symptoms, disturbances in neuronal development and synaptic plasticity have been discussed. The physiological development, regulation and survival of specific neuronal populations shaping neuronal plasticity require the so-called ‘neurotrophic factors’ (NTFs). These regulate cellular proliferation, migration, differentiation and integrity, which are also affected in ASD. Therefore, NTFs have gained increasing attention in ASD research. This review provides an overview and explores the key role of NTFs in the aetiology of ASD. We have also included evidence derived from neurochemical investigations, gene association studies and animal models. By focussing on the role of NTFs in ASD, we intend to further elucidate the puzzling aetiology of these conditions. Molecular Psychiatry (2011) 16, 478–490; doi:10.1038/mp.2010.103; published online 12 October 2010 Keywords: autism; autism spectrum disorders; BDNF; genes; neurotrophic factors; NT-3 Introduction Although the aetiology of ASD is still not fully understood, twin and adoption studies suggest a Approximately one child per 145 babies born in the strong genetic role in the manifestation of the United States will be diagnosed with some form of disorder.8–11 Monozygotic twins show concordance autism spectrum disorder (ASD) throughout their rates of approximately 70–90%, whereas they are only 1 lifespan according to new estimates.
    [Show full text]
  • Novel Neuroprotective Loci Modulating Ischemic Stroke Volume in Wild-Derived Inbred Mouse Strains
    | INVESTIGATION Novel Neuroprotective Loci Modulating Ischemic Stroke Volume in Wild-Derived Inbred Mouse Strains Han Kyu Lee,* Samuel J. Widmayer,† Min-Nung Huang,‡ David L. Aylor,† and Douglas A. Marchuk*,1 *Department of Molecular Genetics and Microbiology and ‡Division of Cardiology, Department of Medicine, Duke University Medical Center, Durham, North Carolina 27710, and †Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695 ORCID IDs: 0000-0002-0876-7404 (H.K.L.); 0000-0002-1200-4768 (S.J.W.); 0000-0002-7589-3734 (M.-N.H.); 0000-0001-6065-4039 (D.L.A.); 0000-0002-3110-6671 (D.A.M.) ABSTRACT To identify genes involved in cerebral infarction, we have employed a forward genetic approach in inbred mouse strains, using quantitative trait loci (QTL) mapping for cerebral infarct volume after middle cerebral artery occlusion. We had previously observed that infarct volume is inversely correlated with cerebral collateral vessel density in most strains. In this study, we expanded the pool of allelic variation among classical inbred mouse strains by utilizing the eight founder strains of the Collaborative Cross and found a wild-derived strain, WSB/EiJ, that breaks this general rule that collateral vessel density inversely correlates with infarct volume. WSB/ EiJ and another wild-derived strain, CAST/EiJ, show the highest collateral vessel densities of any inbred strain, but infarct volume of WSB/EiJ mice is 8.7-fold larger than that of CAST/EiJ mice. QTL mapping between these strains identified four new neuroprotective loci modulating cerebral infarct volume while not affecting collateral vessel phenotypes. To identify causative variants in genes, we surveyed nonsynonymous coding SNPs between CAST/EiJ and WSB/EiJ and found 96 genes harboring coding SNPs predicted to be damaging and mapping within one of the four intervals.
    [Show full text]
  • Table S1. 103 Ferroptosis-Related Genes Retrieved from the Genecards
    Table S1. 103 ferroptosis-related genes retrieved from the GeneCards. Gene Symbol Description Category GPX4 Glutathione Peroxidase 4 Protein Coding AIFM2 Apoptosis Inducing Factor Mitochondria Associated 2 Protein Coding TP53 Tumor Protein P53 Protein Coding ACSL4 Acyl-CoA Synthetase Long Chain Family Member 4 Protein Coding SLC7A11 Solute Carrier Family 7 Member 11 Protein Coding VDAC2 Voltage Dependent Anion Channel 2 Protein Coding VDAC3 Voltage Dependent Anion Channel 3 Protein Coding ATG5 Autophagy Related 5 Protein Coding ATG7 Autophagy Related 7 Protein Coding NCOA4 Nuclear Receptor Coactivator 4 Protein Coding HMOX1 Heme Oxygenase 1 Protein Coding SLC3A2 Solute Carrier Family 3 Member 2 Protein Coding ALOX15 Arachidonate 15-Lipoxygenase Protein Coding BECN1 Beclin 1 Protein Coding PRKAA1 Protein Kinase AMP-Activated Catalytic Subunit Alpha 1 Protein Coding SAT1 Spermidine/Spermine N1-Acetyltransferase 1 Protein Coding NF2 Neurofibromin 2 Protein Coding YAP1 Yes1 Associated Transcriptional Regulator Protein Coding FTH1 Ferritin Heavy Chain 1 Protein Coding TF Transferrin Protein Coding TFRC Transferrin Receptor Protein Coding FTL Ferritin Light Chain Protein Coding CYBB Cytochrome B-245 Beta Chain Protein Coding GSS Glutathione Synthetase Protein Coding CP Ceruloplasmin Protein Coding PRNP Prion Protein Protein Coding SLC11A2 Solute Carrier Family 11 Member 2 Protein Coding SLC40A1 Solute Carrier Family 40 Member 1 Protein Coding STEAP3 STEAP3 Metalloreductase Protein Coding ACSL1 Acyl-CoA Synthetase Long Chain Family Member 1 Protein
    [Show full text]