Development and Growth of the Pectoral
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Osteichthyes: Sarcopterygii) Apex Predator from the Eifelian-Aged Dundee Formation of Ontario, Canada
Canadian Journal of Earth Sciences A large onychodontiform (Osteichthyes: Sarcopterygii) apex predator from the Eifelian-aged Dundee Formation of Ontario, Canada. Journal: Canadian Journal of Earth Sciences Manuscript ID cjes-2016-0119.R3 Manuscript Type: Article Date Submitted by the Author: 04-Dec-2016 Complete List of Authors: Mann, Arjan; Carleton University, Earth Sciences; University of Toronto Faculty of ArtsDraft and Science, Earth Sciences Rudkin, David; Royal Ontario Museum Evans, David C.; Royal Ontario Museum, Natural History; University of Toronto, Ecology and Evolutionary Biology Laflamme, Marc; University of Toronto - Mississauga, Chemical and Physical Sciences Keyword: Sarcopterygii, Onychodontiformes, Body size, Middle Devonian, Eifelian https://mc06.manuscriptcentral.com/cjes-pubs Page 1 of 34 Canadian Journal of Earth Sciences A large onychodontiform (Osteichthyes: Sarcopterygii) apex predator from the Eifelian- aged Dundee Formation of Ontario, Canada. Arjan Mann 1,2*, David Rudkin 1,2 , David C. Evans 2,3 , and Marc Laflamme 1 1, Department of Earth Sciences, University of Toronto, 22 Russell Street, Toronto, Ontario, M5S 3B1, Canada, [email protected], [email protected] 2, Department of Palaeobiology, Royal Ontario Museum, 100 Queen’s Park, Toronto, Ontario, Canada M5S 2C6 3, Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks Street, Toronto, Ontario, Canada M5S 3B2 *Corresponding author (e-mail: [email protected] ca). https://mc06.manuscriptcentral.com/cjes-pubs Canadian Journal of Earth Sciences Page 2 of 34 Abstract The Devonian marine strata of southwestern Ontario, Canada have been well documented geologically, but their vertebrate fossils are poorly studied. Here we report a new onychodontiform (Osteichthyes, Sarcopterygii) Onychodus eriensis n. -
Cambridge University Press 978-1-107-17944-8 — Evolution And
Cambridge University Press 978-1-107-17944-8 — Evolution and Development of Fishes Edited by Zerina Johanson , Charlie Underwood , Martha Richter Index More Information Index abaxial muscle,33 Alizarin red, 110 arandaspids, 5, 61–62 abdominal muscles, 212 Alizarin red S whole mount staining, 127 Arandaspis, 5, 61, 69, 147 ability to repair fractures, 129 Allenypterus, 253 arcocentra, 192 Acanthodes, 14, 79, 83, 89–90, 104, 105–107, allometric growth, 129 Arctic char, 130 123, 152, 152, 156, 213, 221, 226 alveolar bone, 134 arcualia, 4, 49, 115, 146, 191, 206 Acanthodians, 3, 7, 13–15, 18, 23, 29, 63–65, Alx, 36, 47 areolar calcification, 114 68–69, 75, 79, 82, 84, 87–89, 91, 99, 102, Amdeh Formation, 61 areolar cartilage, 192 104–106, 114, 123, 148–149, 152–153, ameloblasts, 134 areolar mineralisation, 113 156, 160, 189, 192, 195, 198–199, 207, Amia, 154, 185, 190, 193, 258 Areyongalepis,7,64–65 213, 217–218, 220 ammocoete, 30, 40, 51, 56–57, 176, 206, 208, Argentina, 60–61, 67 Acanthodiformes, 14, 68 218 armoured agnathans, 150 Acanthodii, 152 amphiaspids, 5, 27 Arthrodira, 12, 24, 26, 28, 74, 82–84, 86, 194, Acanthomorpha, 20 amphibians, 1, 20, 150, 172, 180–182, 245, 248, 209, 222 Acanthostega, 22, 155–156, 255–258, 260 255–256 arthrodires, 7, 11–13, 22, 28, 71–72, 74–75, Acanthothoraci, 24, 74, 83 amphioxus, 49, 54–55, 124, 145, 155, 157, 159, 80–84, 152, 192, 207, 209, 212–213, 215, Acanthothoracida, 11 206, 224, 243–244, 249–250 219–220 acanthothoracids, 7, 12, 74, 81–82, 211, 215, Amphioxus, 120 Ascl,36 219 Amphystylic, 148 Asiaceratodus,21 -
Constraints on the Timescale of Animal Evolutionary History
Palaeontologia Electronica palaeo-electronica.org Constraints on the timescale of animal evolutionary history Michael J. Benton, Philip C.J. Donoghue, Robert J. Asher, Matt Friedman, Thomas J. Near, and Jakob Vinther ABSTRACT Dating the tree of life is a core endeavor in evolutionary biology. Rates of evolution are fundamental to nearly every evolutionary model and process. Rates need dates. There is much debate on the most appropriate and reasonable ways in which to date the tree of life, and recent work has highlighted some confusions and complexities that can be avoided. Whether phylogenetic trees are dated after they have been estab- lished, or as part of the process of tree finding, practitioners need to know which cali- brations to use. We emphasize the importance of identifying crown (not stem) fossils, levels of confidence in their attribution to the crown, current chronostratigraphic preci- sion, the primacy of the host geological formation and asymmetric confidence intervals. Here we present calibrations for 88 key nodes across the phylogeny of animals, rang- ing from the root of Metazoa to the last common ancestor of Homo sapiens. Close attention to detail is constantly required: for example, the classic bird-mammal date (base of crown Amniota) has often been given as 310-315 Ma; the 2014 international time scale indicates a minimum age of 318 Ma. Michael J. Benton. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Philip C.J. Donoghue. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Robert J. -
I Ecomorphological Change in Lobe-Finned Fishes (Sarcopterygii
Ecomorphological change in lobe-finned fishes (Sarcopterygii): disparity and rates by Bryan H. Juarez A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science (Ecology and Evolutionary Biology) in the University of Michigan 2015 Master’s Thesis Committee: Assistant Professor Lauren C. Sallan, University of Pennsylvania, Co-Chair Assistant Professor Daniel L. Rabosky, Co-Chair Associate Research Scientist Miriam L. Zelditch i © Bryan H. Juarez 2015 ii ACKNOWLEDGEMENTS I would like to thank the Rabosky Lab, David W. Bapst, Graeme T. Lloyd and Zerina Johanson for helpful discussions on methodology, Lauren C. Sallan, Miriam L. Zelditch and Daniel L. Rabosky for their dedicated guidance on this study and the London Natural History Museum for courteously providing me with access to specimens. iii TABLE OF CONTENTS ACKNOWLEDGEMENTS ii LIST OF FIGURES iv LIST OF APPENDICES v ABSTRACT vi SECTION I. Introduction 1 II. Methods 4 III. Results 9 IV. Discussion 16 V. Conclusion 20 VI. Future Directions 21 APPENDICES 23 REFERENCES 62 iv LIST OF TABLES AND FIGURES TABLE/FIGURE II. Cranial PC-reduced data 6 II. Post-cranial PC-reduced data 6 III. PC1 and PC2 Cranial and Post-cranial Morphospaces 11-12 III. Cranial Disparity Through Time 13 III. Post-cranial Disparity Through Time 14 III. Cranial/Post-cranial Disparity Through Time 15 v LIST OF APPENDICES APPENDIX A. Aquatic and Semi-aquatic Lobe-fins 24 B. Species Used In Analysis 34 C. Cranial and Post-Cranial Landmarks 37 D. PC3 and PC4 Cranial and Post-cranial Morphospaces 38 E. PC1 PC2 Cranial Morphospaces 39 1-2. -
Universidade Do Estado Do Rio De Janeiro Centro Biomédico Instituto De Biologia Roberto Alcântara Gomes
Universidade do Estado do Rio de Janeiro Centro Biomédico Instituto de Biologia Roberto Alcântara Gomes Raphael Miguel da Silva Biogeografia Histórica de Celacantos (Sarcopterygii: Actinistia) Rio de Janeiro 2016 Raphael Miguel da Silva Biogeografia Histórica de Celacantos (Sarcopterygii: Actinistia) Tese apresentada, como requisito parcial para obtenção do título de Doutor, ao Programa de Pós-graduação em Ecologia e Evolução, da Universidade do Estado do Rio de Janeiro. Orientadora: Prof.a Dra. Valéria Gallo da Silva Rio de Janeiro 2016 CATALOGAÇÃO NA FONTE UERJ / REDE SIRIUS / BIBLIOTECA CTC-A SS586XXX Silva, Raphael Miguel da. Biogeografia histórica de Celacantos (Sarcopterygii: Actinistia) / Raphael Miguel da Silva. - 2016. 271 f. : il. Orientador: Valéria Gallo da Silva. Tese (Doutorado em Ecologia e Evolução) - Universidade do Estado do Rio de Janeiro, Instituto de Biologia Roberto Alcântara Gomes. 1. Biologia marinha - Teses. 2. Peixe – Teses. I. Silva, Valéria Gallo. II. Universidade do Estado do Rio de Janeiro. Instituto de Biologia Roberto Alcântara Gomes. III. Título. CDU 504.4 Autorizo para fins acadêmicos e científicos, a reprodução total ou parcial desta tese, desde que citada a fonte. ___________________________ ________________________ Assinatura Data Raphael Miguel da Silva Biogeografia Histórica de Celacantos (Sarcopterygii: Actinistia) Tese apresentada, como requisito parcial para obtenção do título de Doutor, ao Programa de Pós-graduação em Ecologia e Evolução, da Universidade do Estado do Rio de Janeiro. Aprovada em 15 de fevereiro de 2016. Orientadora: Prof.a Dra. Valéria Gallo da Silva Instituto de Biologia Roberto Alcantara Gomes - UERJ Banca Examinadora: ____________________________________________ Prof. Dr. Paulo Marques Machado Brito Instituto de Biologia Roberto Alcantara Gomes - UERJ ____________________________________________ Prof.ª Dra. -
The Salmon, the Lungfish (Or the Coelacanth) and the Cow: a Revival?
Zootaxa 3750 (3): 265–276 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Editorial ZOOTAXA Copyright © 2013 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3750.3.6 http://zoobank.org/urn:lsid:zoobank.org:pub:0B8E53D4-9832-4672-9180-CE979AEBDA76 The salmon, the lungfish (or the coelacanth) and the cow: a revival? FLÁVIO A. BOCKMANN1,3, MARCELO R. DE CARVALHO2 & MURILO DE CARVALHO2 1Dept. Biologia, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo. Av. dos Bandeirantes 3900, 14040-901 Ribeirão Preto, SP. Brazil. E-mail: [email protected] 2Dept. Zoologia, Instituto de Biociências, Universidade de São Paulo. R. Matão 14, Travessa 14, no. 101, 05508-900 São Paulo, SP. Brazil. E-mails: [email protected] (MRC); [email protected] (MC) 3Programa de Pós-Graduação em Biologia Comparada, FFCLRP, Universidade de São Paul. Av. dos Bandeirantes 3900, 14040-901 Ribeirão Preto, SP. Brazil. In the late 1970s, intense and sometimes acrimonious discussions between the recently established phylogeneticists/cladists and the proponents of the long-standing ‘gradistic’ school of systematics transcended specialized periodicals to reach a significantly wider audience through the journal Nature (Halstead, 1978, 1981; Gardiner et al., 1979; Halstead et al., 1979). As is well known, cladistis ‘won’ the debate by showing convincingly that mere similarity or ‘adaptive levels’ were not decisive measures to establish kinship. The essay ‘The salmon, the lungfish and the cow: a reply’ by Gardiner et al. (1979) epitomized that debate, deliberating to a wider audience the foundations of the cladistic paradigm, advocating that shared derived characters (homologies) support a sister- group relationship between the lungfish and cow exclusive of the salmon (see also Rosen et al., 1981; Forey et al., 1991). -
Early Gnathostome Phylogeny Revisited: Multiple Method Consensus
RESEARCH ARTICLE Early Gnathostome Phylogeny Revisited: Multiple Method Consensus Tuo Qiao1, Benedict King2, John A. Long2, Per E. Ahlberg3, Min Zhu1* 1 Key Laboratory of Vertebrate Evolution and Human Origins of Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, China, 2 School of Biological Sciences, Flinders University, Adelaide, South Australia, Australia, 3 Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, NorbyvaÈgen, Uppsala, Sweden * [email protected] a11111 Abstract A series of recent studies recovered consistent phylogenetic scenarios of jawed verte- brates, such as the paraphyly of placoderms with respect to crown gnathostomes, and anti- archs as the sister group of all other jawed vertebrates. However, some of the phylogenetic OPEN ACCESS relationships within the group have remained controversial, such as the positions of Ente- Citation: Qiao T, King B, Long JA, Ahlberg PE, Zhu lognathus, ptyctodontids, and the Guiyu-lineage that comprises Guiyu, Psarolepis and M (2016) Early Gnathostome Phylogeny Revisited: Achoania. The revision of the dataset in a recent study reveals a modified phylogenetic Multiple Method Consensus. PLoS ONE 11(9): hypothesis, which shows that some of these phylogenetic conflicts were sourced from a e0163157. doi:10.1371/journal.pone.0163157 few inadvertent miscodings. The interrelationships of early gnathostomes are addressed Editor: Hector Escriva, Laboratoire Arago, FRANCE based on a combined new dataset with 103 taxa and 335 characters, which is the most Received: May 2, 2016 comprehensive morphological dataset constructed to date. This dataset is investigated in a Accepted: September 2, 2016 phylogenetic context using maximum parsimony (MP), Bayesian inference (BI) and maxi- Published: September 20, 2016 mum likelihood (ML) approaches in an attempt to explore the consensus and incongruence between the hypotheses of early gnathostome interrelationships recovered from different Copyright: 2016 Qiao et al. -
The Origin and Diversification of Osteichthyans and Sarcopterygians: Rare Chinese Fossil Findings Advance Research on Key Issues of Evolution
Vol.24 No.2 2010 Paleoichthyology The Origin and Diversification of Osteichthyans and Sarcopterygians: Rare Chinese Fossil Findings Advance Research on Key Issues of Evolution YU Xiaobo1, 2 ZHU Min1* and ZHAO Wenjin1 1 Key Laboratory of Evolutionary Systematics of Vertebrates, Institute of Vertebrate Paleontology and Paleoanthropology (IVPP), CAS, Beijing 100044, China 2 Department of Biological Sciences, Kean University, Union, New Jersey 07083, USA iving organisms represent into a hierarchical (or “set-within- chimaeras) with 970 living species, only 1% of all the biota that set”) pattern of groupings on the and the long-extinct placoderms and Lhas ever existed on earth. family tree, with members of each acanthodians. Within osteichthyans, All organisms, living or extinct, new group united by a common the actinopterygian lineage (with are related to each other by sharing ancestor and characterized by novel 26,981 living species) includes common ancestors at different levels, biological features. For instance, sturgeons, gars, teleosts and their like twigs and branches connected within vertebrates, gnathostomes (or relatives, while the sarcopterygian to each other at different nodes on jawed vertebrates) arose as a new lineage (with 26,742 living species) the great tree of life. One major task group when they acquired jaws as includes lungfishes, coelacanths for paleontologists and evolutionary novel features, which set them apart (Latimeria), their extinct relatives as biologists is to find out how the from jawless agnathans (lampreys, well as all land-dwelling tetrapods diverse groups of organisms arose hagfishes and their relatives). Within (amphibians, reptiles, birds, and and how they are related to each gnathostomes, four major groups mammals) (Fig.1). -
Lower Jaw Character Transitions Among Major Sarcopterygian Groups – a Survey Based on New Materials from Yunnan, China
Recent Advances in the Origin and Early Radiation of Vertebrates G. Arratia, M. V. H. Wilson & R. Cloutier (eds.): pp. 271-286, 8 figs. © 2004 by Verlag Dr. Friedrich Pfeil, München, Germany – ISBN 3-89937-052-X Lower jaw character transitions among major sarcopterygian groups – a survey based on new materials from Yunnan, China Min ZHU & Xiaobo YU Abstract The lower jaw materials of stem-group sarcopterygian Achoania and an indeterminable form with certain onycho- dont features are described for the first time from the Lower Devonian of Yunnan, China. In addition, new observations on lower jaw features in Psarolepis and Styloichthys from Yunnan are reported to expand or amend previous descriptions. The lower jaw features of Achoania corroborate the phylogenetic position of Achoania originally derived from features of the anterior cranial portion. Comparison with available onychodont lower jaws suggests that the indeterminable form from Yunnan and Langdenia from northern Vietnam may represent lower jaw materials of basal onychodonts in the Lockhovian fauna of South China. The lower jaw features of basal sarcopterygian groups, when mapped onto our previous cladogram (ZHU & YU 2002), suggest two major changes in lower jaw character transitions leading from the condition in basal actinopterygians to the condition in dipnomorphs and tetrapodomorphs. The first major change is represented by the occurrence in Psarolepis of a parasymphysial dental plate bearing a tooth whorl with fangs, five coronoids with precoronoid and intercoronoid fossae, and a prearticular extending forward and covering the area mesial to the coronoid series. The second major change is the occurrence of the 3-coronoid condition in Styloichthys, dipnomorphs and tetrapodomorphs. -
SCIENCE CHINA Cranial Morphology of the Silurian Sarcopterygian Guiyu Oneiros (Gnathostomata: Osteichthyes)
SCIENCE CHINA Earth Sciences • RESEARCH PAPER • December 2010 Vol.53 No.12: 1836–1848 doi: 10.1007/s11430-010-4089-6 Cranial morphology of the Silurian sarcopterygian Guiyu oneiros (Gnathostomata: Osteichthyes) QIAO Tuo1,2 & ZHU Min1* 1 Key Laboratory of Evolutionary Systematics of Vertebrates, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing 100044, China; 2 Graduate School of Chinese Academy of Sciences, Beijing 100049, China Received April 6, 2010; accepted July 13, 2010 Cranial morphological features of the stem-group sarcopterygian Guiyu oneiros Zhu et al., 2009 provided here include the dermal bone pattern and anatomical details of the ethmosphenoid. Based on those features, we restored, for the first time, the skull roof bone pattern in the Guiyu clade that comprises Psarolepis and Achoania. Comparisons with Onychodus, Achoania, coelacanths, and actinopterygians show that the posterior nostril enclosed by the preorbital or the preorbital process is shared by actinopterygians and sarcopterygians, and the lachrymals in sarcopterygians and actinopterygians are not homologous. The endocranium closely resembles that of Psarolepis, Achoania and Onychodus; however, the attachment area of the vomer pos- sesses irregular ridges and grooves as in Youngolepis and Diabolepis. The orbito-nasal canal is positioned mesial to the nasal capsule as in Youngolepis and porolepiforms. The position of the hypophysial canal at the same level or slightly anterior to the ethmoid articulation represents a synapmorphy of the Guiyu clade. The large attachment area of the basicranial muscle indi- cates the presence of a well-developed intracranial joint in Guiyu. Sarcopterygii, Osteichthyes, Cranial morphology, homology, Silurian, China Citation: Qiao T, Zhu M. -
Sarcopterygii, Tetrapodomorpha)
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 421 Morphology, Taxonomy and Interrelationships of Tristichopterid Fishes (Sarcopterygii, Tetrapodomorpha) DANIEL SNITTING ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6214 UPPSALA ISBN 978-91-554-7153-8 2008 urn:nbn:se:uu:diva-8625 ! " ! #$ #%% &'$ ( ( ( ) * + , * - * #%% * . + / ( + " 0- + 1* ! * 2#* $2 * * /-3 45 646$$265$&6 * + 0- + 1 ( ( (* + ( ( , ( , , ( ( * 7 , ( ( 8 , ( ( (( 9* + ( , 9 , (, :( ( * / ( ( ( * + ( , , , * ; ( , ( ( + * + ( * ! ( , + ( , * + ( , 6, ( ( , ( < , , : * + , , < , , ( * ! ( * - + + + ! " # $ %& ' !()*+,- = - #%% /-- 8$68#2 /-3 45 646$$265$&6 ' ''' 6 8#$ 0 '>> **> ? @ ' ''' 6 8#$1 Et ignotas animum dimittit in artes. -Ovid, Metamorphoses VIII, 118 Trust your mechanic. -Dead Kennedys List of papers This thesis is based on the following papers, which will be referred to in the text by their Roman numerals: I Snitting, D. A redescription of the anatomy of Spodichthys buetleri Jarvik, 1985 (Sarcopterygii, Tetrapodomorpha) from -
Earliest Known Coelacanth Skull Extends the Range of Anatomically Modern Coelacanths to the Early Devonian
ARTICLE Received 9 Jan 2012 | Accepted 29 Feb 2012 | Published 10 Apr 2012 DOI: 10.1038/ncomms1764 Earliest known coelacanth skull extends the range of anatomically modern coelacanths to the Early Devonian Min Zhu1, Xiaobo Yu1,2, Jing Lu1, Tuo Qiao1, Wenjin Zhao1 & Liantao Jia1 Coelacanths are known for their evolutionary conservatism, and the body plan seen in Latimeria can be traced to late Middle Devonian Diplocercides, Holopterygius and presumably Euporosteus. However, the group’s early history is unclear because of an incomplete fossil record. Until now, the only Early Devonian coelacanth is an isolated dentary (Eoactinistia) from Australia, whose position within the coelacanths is unknown. Here we report the earliest known coelacanth skull (Euporosteus yunnanensis sp. nov.) from the Early Devonian (late Pragian) of Yunnan, China. Resolved by maximum parsimony, maximum likelihood and Bayesian analyses as crownward of Diplocercides or as its sister taxon, the new form extends the chronological range of anatomically modern coelacanths by about 17 Myr. The finding lends support to the possibility that Eoactinistia is also an anatomically modern coelacanth, and provides a more refined reference point for studying the rapid early diversification and subsequent evolutionary conservatism of the coelacanths. 1 Key Laboratory of Evolutionary Systematics of Vertebrates, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Xiwaidajie 142, PO Box 643, Beijing 100044, China. 2 Department of Biological Sciences, Kean University, Union, New Jersey, USA. Correspondence and requests for materials should be addressed to M.Z. (email: [email protected]). NATURE COMMUNICATIONS | 3:772 | DOI: 10.1038/ncomms1764 | www.nature.com/naturecommunications © 2012 Macmillan Publishers Limited.