A Survey of the Elymus L. Sl Species Complex
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Who's Related to Whom?
149 Who’s related to whom? Recent results from molecular systematic studies Elizabeth A Kellogg Similarities among model systems can lead to generalizations systematist’s question-why are there so many different about plants, but understanding the differences requires kinds of organisms? Studies of the evolution of develop- systematic data. Molecular phylogenetic analyses produce ment demand that the investigator go beyond the model results similar to traditional classifications in the grasses system and learn the pattern of variation in its relatives (Poaceae), and relationships among the cereal crops [3*]. This requires a reasonable assessment of the relatives’ are quite clear. Chloroplast-based phylogenies for the identity. Solanaceae show that tomato is best considered as a species of Solarium, closely related to potatoes. Traditional Knowledge of plant relationships has increased rapidly classifications in the Brassicaceae are misleading with in the past decade, reflecting partly the development regard to true phylogenetic relationships and data are only of molecular systematics. It has been known for some now beginning to clarify the situation. Molecular data are time that plant classifications do not reflect phylogeny also being used to revise our view of relationships among accurately, even though both phylogeny and classification flowering plant families. Phylogenetic data are critical for are hierarchical. The hierarchy of classification was interpreting hypotheses of the evolution of development. imposed in the late 18th century, well before ideas of descent with modification (evolution) were prevalent [4]. These pre-evolutionary groups were then re-interpreted in Address an evolutionary context, and were assumed to be products Harvard University Herbaria, 22 Divinity Avenue Cambridge, MA of evolution, rather than man-made artefacts. -
Evolutionary Consequences of Dioecy in Angiosperms: the Effects of Breeding System on Speciation and Extinction Rates
EVOLUTIONARY CONSEQUENCES OF DIOECY IN ANGIOSPERMS: THE EFFECTS OF BREEDING SYSTEM ON SPECIATION AND EXTINCTION RATES by JANA C. HEILBUTH B.Sc, Simon Fraser University, 1996 A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in THE FACULTY OF GRADUATE STUDIES (Department of Zoology) We accept this thesis as conforming to the required standard THE UNIVERSITY OF BRITISH COLUMBIA July 2001 © Jana Heilbuth, 2001 Wednesday, April 25, 2001 UBC Special Collections - Thesis Authorisation Form Page: 1 In presenting this thesis in partial fulfilment of the requirements for an advanced degree at the University of British Columbia, I agree that the Library shall make it freely available for reference and study. I further agree that permission for extensive copying of this thesis for scholarly purposes may be granted by the head of my department or by his or her representatives. It is understood that copying or publication of this thesis for financial gain shall not be allowed without my written permission. The University of British Columbia Vancouver, Canada http://www.library.ubc.ca/spcoll/thesauth.html ABSTRACT Dioecy, the breeding system with male and female function on separate individuals, may affect the ability of a lineage to avoid extinction or speciate. Dioecy is a rare breeding system among the angiosperms (approximately 6% of all flowering plants) while hermaphroditism (having male and female function present within each flower) is predominant. Dioecious angiosperms may be rare because the transitions to dioecy have been recent or because dioecious angiosperms experience decreased diversification rates (speciation minus extinction) compared to plants with other breeding systems. -
Large Trees, Supertrees and the Grass Phylogeny
LARGE TREES, SUPERTREES AND THE GRASS PHYLOGENY Thesis submitted to the University of Dublin, Trinity College for the Degree of Doctor of Philosophy (Ph.D.) by Nicolas Salamin Department of Botany University of Dublin, Trinity College 2002 Research conducted under the supervision of Dr. Trevor R. Hodkinson Department of Botany, University of Dublin, Trinity College Dr. Vincent Savolainen Jodrell Laboratory, Molecular Systematics Section, Royal Botanic Gardens, Kew, London DECLARATION I thereby certify that this thesis has not been submitted as an exercise for a degree at any other University. This thesis contains research based on my own work, except where otherwise stated. I grant full permission to the Library of Trinity College to lend or copy this thesis upon request. SIGNED: ACKNOWLEDGMENTS I wish to thank Trevor Hodkinson and Vincent Savolainen for all the encouragement they gave me during the last three years. They provided very useful advice on scientific papers, presentation lectures and all aspects of the supervision of this thesis. It has been a great experience to work in Ireland, and I am especially grateful to Trevor for the warm welcome and all the help he gave me, at work or outside work, since the beginning of this Ph.D. in the Botany Department. I will always remember his patience and kindness to me at this time. I am also grateful to Vincent for his help and warm welcome during the different periods of time I stayed in London, but especially for all he did for me since my B.Sc. at the University of Lausanne. I wish also to thank Prof. -
A Survey of the Elymus L. S. L. Species Complex (Triticeae, Poaceae) in Italy: Taxa and Nothotaxa, New Combinations and Identification Key
Natural History Sciences. Atti Soc. it. Sci. nat. Museo civ. Stor. nat. Milano, 5 (2): 57-64, 2018 DOI: 10.4081/nhs.2018.392 A survey of the Elymus L. s. l. species complex (Triticeae, Poaceae) in Italy: taxa and nothotaxa, new combinations and identification key Enrico Banfi Abstract - Elymus s. l. is a critical topic on which only a little INTRODUCTION light has begun to be made regarding phylogenetic reticulation, Elymus L. s. l. is one of the most debated topic among genome evolution and consistency of genera. In Italy, Elymus s. l. officially includes ten species (nine native, one alien) and some genera within the tribe Triticeae (Poaceae), with represen- well-established and widespread hybrids generally not treated as tatives spread all over the world. It has been the subject little or nothing is known of them. In this paper fourteen species of basic studies (Löve A., 1984; Dewey, 1984) that have (with two subspecies) and six hybrids are taken into account and opened important horizons not only in the field of agroge- the following seven new combinations are proposed: Thinopyrum netic research, but also and especially on systematics and acutum (DC.) Banfi, Thinopyrum corsicum (Hack.) Banfi, Thi- taxonomy. However, the still rather coarse knowledge of nopyrum intermedium (Host) Barkworth & Dewey subsp. pouzolzii (Godr.) Banfi, Thinopyrum obtusiflorum (DC.) Banfi, Thinopyrum the genomes and the lack of a satisfactory interpretation ×duvalii (Loret) Banfi, ×Thinoelymus drucei (Stace) Banfi, ×Thi- of their role in the highly reticulate phylogeny of Triticeae noelymus mucronatus (Opiz) Banfi. Some observations are pro- for a long time discouraged taxonomists to clarify species vided for each subject and a key to species, subspecies and hybrids relationships within Elymus s. -
Phylogeny of Elymus Ststhh Allotetraploids Based on Three Nuclear Genes
Reticulate Evolutionary History of a Complex Group of Grasses: Phylogeny of Elymus StStHH Allotetraploids Based on Three Nuclear Genes Roberta J. Mason-Gamer*, Melissa M. Burns¤a, Marianna Naum¤b Department of Biological Sciences, The University of Illinois at Chicago, Chicago, Illinois, United States of America Abstract Background: Elymus (Poaceae) is a large genus of polyploid species in the wheat tribe Triticeae. It is polyphyletic, exhibiting many distinct allopolyploid genome combinations, and its history might be further complicated by introgression and lineage sorting. We focus on a subset of Elymus species with a tetraploid genome complement derived from Pseudoroegneria (genome St) and Hordeum (H). We confirm the species’ allopolyploidy, identify possible genome donors, and pinpoint instances of apparent introgression or incomplete lineage sorting. Methodology/Principal Findings: We sequenced portions of three unlinked nuclear genes—phosphoenolpyruvate carboxylase, b-amylase, and granule-bound starch synthase I—from 27 individuals, representing 14 Eurasian and North American StStHH Elymus species. Elymus sequences were combined with existing data from monogenomic representatives of the tribe, and gene trees were estimated separately for each data set using maximum likelihood. Trees were examined for evidence of allopolyploidy and additional reticulate patterns. All trees confirm the StStHH genome configuration of the Elymus species. They suggest that the StStHH group originated in North America, and do not support separate North American and European origins. Our results point to North American Pseudoroegneria and Hordeum species as potential genome donors to Elymus. Diploid P. spicata is a prospective St-genome donor, though conflict among trees involving P. spicata and the Eurasian P. -
Orthoptera: Acrididae)
Contributions to the nutritional ecology of the endangered grasshopper Chorthippus pullus (Philippi 1830) (Orthoptera: Acrididae) Diplomarbeit der Philosophisch-naturwissenschaftlichen Fakultät der Universität Bern vorgelegt von Annik Steiner 2006 Leiter der Arbeit: Prof. Dr. Jürg Zettel Zoologisches Institut, Abteilung Synökologie, Bern Table of contents Abstract..................................................................................................................................... 1 Zusammenfassung.................................................................................................................... 2 1 Introduction ...................................................................................................................... 3 2 Material and Methods...................................................................................................... 5 2.1 Study area................................................................................................................... 5 2.2 Survey of vegetation and ground cover...................................................................... 5 2.3 Faeces collection ........................................................................................................ 6 2.4 Faecal analysis............................................................................................................ 7 2.5 Feeding experiments .................................................................................................. 8 2.6 Mandibular morphology............................................................................................ -
Historical Review and Prospect of Taxonomy of Tribe Triticeae Dumortier (Poaceae)
Breeding Science 59: 513–518 (2009) Review Historical review and prospect of taxonomy of tribe Triticeae Dumortier (Poaceae) Chi Yen* and Jun Liang Yang Triticeae Research Institute, Sichuan Agricultural University, Chengdu 611130, Sichuan, The People’s Republic of China The tribe Triticeae is a taxon in the Poaceae that includes several important cereal crops and forage grasses. All its species, including those that are not used for cereals or forage, are potential sources of genes for crop and forage improvement so they all have high economic value. Taxonomic treatments, including those of the Triticeae, are the basis for identification. They are often designed to reflect phylogenetic relationships and provide a guide for germplasm utilization. Traditional taxonomic treatments of the Triticeae were based on comparative morphology and geography. Morphological characters are phenotypes of an organism, resulting from interactions between or among dominant genes and environmental factors. Morphology cannot reflect recessive inheritance. Similar environmental conditions may result in morphological convergence in distantly related taxa and different environmental conditions in morphological divergence of closely related taxa. Con- sequently, traditional morphological taxonomy may result in misclassification. Cytogenetic and/or molecular genomic analysis may reveal such mistakes. On the basis of recent genomic investigations of the Triticeae, we have recognized 30 genera in this tribe. The taxonomic changes and genomic constitution of these genera are presented in this paper. Key Words: Triticeae, genera, genomic constitution, phylogenetic relationships. Introduction Linnaeus (1753) later named them Aegilops ovata and Ae. triuncialis, respectively. These names are, however, al- The tribe Triticeae is a taxon in the Poaceae that includes ways attributed to Linnaeus because, ever since acceptance several important cereal crops and forage grasses. -
CEETO Sustainable Tourism Action Plan
SUSTAINABLE TOURISM ACTION PLAN • High Modenese Apennine Regional Park • Nirano’s Mud Volcanoes Natural Reserve D.T2.2.3 – Emilia-Romagna Region (PP01) – Ver.2.3 Central Emilia Parks Managing Authority 05/2019 Table of Contents 1. Introduction .................................................................................................... 3 2. Protected Areas managed by the Central Emilia Authority .......................................... 4 3. Demographic setting of the areas ......................................................................... 8 4. Protected Areas involved in CEETO Project ............................................................. 9 4.1. High Modenese Apennine Regional Park ............................................................. 9 4.1.1. Flora and Fauna .................................................................................... 11 4.1.2. Pratignano Lake .................................................................................... 12 4.1.3. Santo Lake ........................................................................................... 13 4.2. Salse di Nirano Nature Reserve ...................................................................... 14 4.2.1. Flora and Fauna .................................................................................... 16 5. Strategy ........................................................................................................ 19 5.1. Vision for sustainable tourism ...................................................................... -
Evolutionary Dynamics of the Pgk1 Gene in the Polyploid Genus Kengyilia (Triticeae: Poaceae) and Its Diploid Relatives
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by PubMed Central Evolutionary Dynamics of the Pgk1 Gene in the Polyploid Genus Kengyilia (Triticeae: Poaceae) and Its Diploid Relatives Xing Fan1,2., Li-Na Sha1., Jian Zeng3, Hou-Yang Kang1, Hai-Qin Zhang1, Xiao-Li Wang4, Li Zhang4, Rui- Wu Yang4, Chun-Bang Ding4, You-Liang Zheng1,2, Yong-Hong Zhou1,2* 1 Triticeae Research Institute, Sichuan Agricultural University, Sichuan, People’s Republic of China, 2 Key Laboratory of Crop Genetic Resources and Improvement, Ministry of Education, Sichuan Agricultural University, Sichuan, People’s Republic of China, 3 College of Resources and Environment, Sichuan Agricultural University, Sichuan, People’s Republic of China, 4 Department of Biology and Science, Sichuan Agricultural University, Sichuan, People’s Republic of China Abstract The level and pattern of nucleotide variation in duplicate gene provide important information on the evolutionary history of polyploids and divergent process between homoeologous loci within lineages. Kengyilia is a group of allohexaploid species with the StYP genomic constitutions in the wheat tribe. To investigate the evolutionary dynamics of the Pgk1 gene in Kengyilia and its diploid relatives, three copies of Pgk1 homoeologues were isolated from all sampled hexaploid Kengyilia species and analyzed with the Pgk1 sequences from 47 diploid taxa representing 18 basic genomes in Triticeae. Sequence diversity patterns and genealogical analysis suggested that (1) Kengyilia species -
Morphological Identification of Genomic Genera in the Triticeae
Breeding Science 59: 561–570 (2009) Morphological identification of genomic genera in the Triticeae Mary E. Barkworth*1), D. Richard Cutler2), Jeffrey S. Rollo1), Surrey W.L. Jacobs3) and Abdur Rashid4) 1) Intermountain Herbarium, Department of Biology, Utah State University, Logan, Utah 84322-5305, USA 2) Department of Mathematics and Statistics, Utah State University, Logan, Utah 84322-3900, USA 3) National Herbarium of New South Wales, Mrs Macquarries Road, Sydney, N.S.W. 2000, Australia 4) University of Peshawar Botanic Garden, University of Peshawar, Peshawar, Northwest Frontier Province, Pakistan Our goal was to determine whether the genomic groups of perennial species Triticeae having solitary spikelets could be identified morphologically and, if so, to construct identification keys that could be used for this purpose. If so, it would strengthen the argument for recognizing such groups as genera. We conducted Dis- criminant and Random Forest® analyses of 61 characters scored on 218 herbarium specimens representing 13 genomic groups. In addition, we closely examined some additional characters that came to our attention, evaluating our findings on specimens not scored for the two kinds of analysis. Random Forest® analysis was almost always more successful in distinguishing the genomic groups, whether separating all 13 groups or a subset of the 13. The results suggest that it is usually possible to identify the genomic group to which a spec- imen of perennial Triticeae with solitary spikelets belongs on the basis of its morphology but that doing so will require examination of characters that have not been considered particularly important in the past. Among these are the length of the middle inflorescence internodes, the width of the palea tip, and the morphology of the glumes. -
Urbanizing Flora of Portland, Oregon, 1806-2008
URBANIZING FLORA OF PORTLAND, OREGON, 1806-2008 John A. Christy, Angela Kimpo, Vernon Marttala, Philip K. Gaddis, Nancy L. Christy Occasional Paper 3 of the Native Plant Society of Oregon 2009 Recommended citation: Christy, J.A., A. Kimpo, V. Marttala, P.K. Gaddis & N.L. Christy. 2009. Urbanizing flora of Portland, Oregon, 1806-2008. Native Plant Society of Oregon Occasional Paper 3: 1-319. © Native Plant Society of Oregon and John A. Christy Second printing with corrections and additions, December 2009 ISSN: 1523-8520 Design and layout: John A. Christy and Diane Bland. Printing by Lazerquick. Dedication This Occasional Paper is dedicated to the memory of Scott D. Sundberg, whose vision and perseverance in launching the Oregon Flora Project made our job immensely easier to complete. It is also dedicated to Martin W. Gorman, who compiled the first list of Portland's flora in 1916 and who inspired us to do it again 90 years later. Acknowledgments We wish to acknowledge all the botanists, past and present, who have collected in the Portland-Vancouver area and provided us the foundation for our study. We salute them and thank them for their efforts. We extend heartfelt thanks to the many people who helped make this project possible. Rhoda Love and the board of directors of the Native Plant Society of Oregon (NPSO) exhibited infinite patience over the 5-year life of this project. Rhoda Love (NPSO) secured the funds needed to print this Occasional Paper. Katy Weil (Metro) and Deborah Lev (City of Portland) obtained funding for a draft printing for their agencies in June 2009. -
Synonymique De La Flore De Suisse Synonymie-Index Der Schweizer Flora Indice Sinonimico Della Flora Della Svizzera
Documenta Floristicae Helvetiae N° 2 Index synonymique de la Flore de Suisse et territoires limitrophes (ISFS) Synonymie-Index der Schweizer Flora und der angrenzenden Gebiete (SISF) Indice sinonimico della Flora della Svizzera e territori limitrofi (ISFS) D. Aeschimann & C. Heitz avec la collaboration de – in Zusammenarbeit mit – con la collaborazione di C. Latour, P. Perret & B. Bäumler 2ème édition – 2te Auflage – 2da edizione Genève 2005 Abréviations Statut des noms latins Ouvrages de référence aggr. = [lat.: aggregatum], agrégat 1. Les noms Acceptés, retenus par les auteurs de l’ISFS. Ils Referenzwerke auct. = [lat.: auctorum], des auteurs figurent en gras (ex.: Sparganium angustifolium Michx.). Opere di riferimento s.l. = [lat.: sensu lato], au sens large 2. Les noms Synonymes, qui sont en italiques (ex.: Sparganium AB = Aeschimann, D. & H. M. Burdet (2005). Flore de la s.str. = [lat.: sensu stricto], au sens strict minimum Wallr.). Suisse et des territoires limitrophes. Le Nouveau Binz. subsp. = [lat.: subspecies], sous-espèce 3. Les noms appliqués à des taxons Inclus, qui correspondent Ed. 3. Haupt, Berne. var. = [lat.: varietas], variété à des entités taxonomiques étroites, incluses dans un taxon Ξ = xénophyte plus large au nom le plus souvent accepté. Ils sont cités en BH = Binz, A. & Ch. Heitz (1990). Schul- und Exkursions- X = pas présent en Suisse gras et italiques (ex.: Sparganium erectum subsp. oocarpum flora für die Schweiz. Ed. 19. Schwabe, Basel. ? = présence en Suisse douteuse, ou sporadique (Čelak.) Domin). FH = Lauber, K. & G. Wagner (2001). Flora Helvetica. 4. Les noms en Regroupant plusieurs autres. Ils figurent en Explications complètes aux pp. 5-6. Ed.