bioRxiv preprint doi: https://doi.org/10.1101/2020.02.05.935759. this version posted February 7, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. It is made available under a CC-BY 4.0 International license. Manuscript submitted to Hippocampus Transcriptome analysis of hippocampal subfields identifies gene expression profiles associated with long-term active place avoidance memory Rayna M. Harris1†, Hsin-Yi Kao2‡, Juan Marcos Alarcón3, André A. Fenton2,3, Hans A. Hofmann1 *For correspondence:
[email protected] (RMH) 1Deptartment Integrative Biology; Institute for Cell and Molecular Biology, The 2 Present address: †Department of University of Texas at Austin; Center for Neural Science; Neuroscience Institute at the Neurobiology, Physiology and New York University Langone Medical Center, New York University; 3Dept. of Pathology; Behavior, University of California, Davis; ‡Neurology Department, The Robert F. Furchgott Center for Neural and Behavioral Science, SUNY Downstate University of Michigan, Ann Arbor Health Sciences University Abstract The hippocampus plays a critical role in storing and retrieving spatial information. By targeting the dorsal hippocampus and manipulating specific "candidate" molecules using pharmacological and genetic manipulations, we have previously discovered that long-term active place avoidance memory requires transient activation of particular molecules in dorsal hippocampus. These molecules include amongst others, the persistent kinases Ca-calmodulin kinase II (CaMKII) and the atypical protein kinase C isoform PKC / for acquisition of the conditioned behavior, whereas persistent activation of the other atypical PKC, protein kinase M zeta (PKM ) is necessary for maintaining the memory for at least a month. It nonetheless remains unclear what other molecules and their interactions maintain active place avoidance long-term memory, and the candidate molecule approach is both impractical and inadequate to identify new candidates since there are so many to survey.