Chemical Bonding: the Journey from Miniature Hooks to Density Functional Theory
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Brief Guide to the Nomenclature of Organic Chemistry
1 Brief Guide to the Nomenclature of Table 1: Components of the substitutive name Organic Chemistry (4S,5E)-4,6-dichlorohept-5-en-2-one for K.-H. Hellwich (Germany), R. M. Hartshorn (New Zealand), CH3 Cl O A. Yerin (Russia), T. Damhus (Denmark), A. T. Hutton (South 4 2 Africa). E-mail: [email protected] Sponsoring body: Cl 6 CH 5 3 IUPAC Division of Chemical Nomenclature and Structure suffix for principal hept(a) parent (heptane) one Representation. characteristic group en(e) unsaturation ending chloro substituent prefix 1 INTRODUCTION di multiplicative prefix S E stereodescriptors CHEMISTRY The universal adoption of an agreed nomenclature is a key tool for 2 4 5 6 locants ( ) enclosing marks efficient communication in the chemical sciences, in industry and Multiplicative prefixes (Table 2) are used when more than one for regulations associated with import/export or health and safety. fragment of a particular kind is present in a structure. Which kind of REPRESENTATION The International Union of Pure and Applied Chemistry (IUPAC) multiplicative prefix is used depends on the complexity of the provides recommendations on many aspects of nomenclature.1 The APPLIED corresponding fragment – e.g. trichloro, but tris(chloromethyl). basics of organic nomenclature are summarized here, and there are companion documents on the nomenclature of inorganic2 and Table 2: Multiplicative prefixes for simple/complicated entities polymer3 chemistry, with hyperlinks to original documents. An No. Simple Complicated No. Simple Complicated AND overall -
Institution: University of Nottingham Unit of Assessment: Uoa 8 (Chemistry) A
Environment template (REF5) Institution: University of Nottingham Unit of Assessment: UoA 8 (Chemistry) a. Overview: The School is returning 42 category A researchers (100% of eligible staff), including 25 Professors (two FRSs$), 8 Associate Professors, 4 Lecturers and 5 fixed-term Research Fellows (denoted*). Our research, impact and industry engagement has attracted international recognition in the following overlapping thematic areas: • Theoretical and Computational Chemistry: Besley, Bichoutskaia, Hirst, Robinson*, Teale*, Wheatley. • Molecular Structure and Spectroscopy: George, Jones, Powis, Reid, Sarre, Stace$, Wright. • Chemical and Structural Biology: Dowden, Oldham, Searle, Soultanas, Thomas. • Sustainable Synthesis and Catalysis: Denton, Hayes, Kays, Lam, Licence, Liddle, Lygo, McMaster, Moody, Moses, Poliakoff $, Stockman, Woodward. • Functional Materials and Nanosciences: Blake, Champness, Gibson*, Gimenez-Lopez*, Howdle, Khlobystov, Mokaya, Schröder, Titman, Walsh, Yang*. b. Research strategy b1: Achievement of strategic aims stated in RAE2008: 1. Achieving a Sustainable Research Environment. Our aims since 2008 have been to strengthen our research at the interfaces between Chemistry and other physical sciences, the life sciences and engineering. We have built upon our strong research base and have ensured the sustainability and vitality of our environment by the strategic allocation of resources, major investments in instrumentation and infrastructure to provide world-class facilities (see d), and by nurturing Early Career Researchers (ECRs, see c1). The School has exploited new research opportunities and driven national research priorities by engagement in EPSRC Portfolio Shaping, membership of SATs and boards of UK facilities (see e3). We have strengthened our knowledge exchange activities with industry (see e2) and the public to increase research impact, and have built critical mass in research and training (see e1). -
Courses of Study for Generic Elective 'B
COURSES OF STUDY FOR GENERIC ELECTIVE 'B. Sc, HODs' PROGRAMME IN "CHEMISTRY" GENERIC ELECTIVE All Four Generic Papers (One paper to be studied in each semester) of Chemistry to be studied by the Students of Other than Chemistry Honours. SEM- I Generic Elective Papers (GE-l) (Minor-Chemistry) (any four) for other Departments/ Disciplines: (Credit: 06 each) GE: ATOMIC STRUCTURE, BONDING, GENERAL ORGANIC CHEMISTRY & ALIPHATIC HYDROCARBONS (Credits: Theory-04, Practicals-02) Theory: 60 Lectures Section A: Inorganic Chemistry-I (30 Periods) Atomic Structure: Review of Bohr's theory and its limitations, dual behaviour of matter and radiation, de Broglie's relation, Heisenberg Uncertainty principle. Hydrogen atom spectra. Need of a new approach to Atomic structure. What is Quantum mechanics? Time independent Schrodinger equation and meaning of various terms in it. Significance of !fl and !fl2, Schrodinger equation for hydrogen atom. Radial and angular parts of the hydogenic wavefunctions (atomic orbitals) and their variations for Is, 2s, 2p, 3s, 3p and 3d orbitals (Only graphical representation). Radial and angular nodes and their significance. Radial distribution functions and the concept of the most probable distance with special reference to Is and 2s atomic orbitals. Significance of quantum numbers, orbital angular momentum and quantum numbers m I and m«. Shapes of s, p and d atomic orbitals, nodal planes. Discovery of spin, spin quantum number (s) and magnetic spin quantum number (ms). Rules for filling electrons in various orbitals, Electronic configurations of the atoms. Stability of half-filled and completely filled orbitals, concept of exchange energy. Relative energies of atomic orbitals, Anomalous electronic configurations. -
Topological Analysis of the Metal-Metal Bond: a Tutorial Review Christine Lepetit, Pierre Fau, Katia Fajerwerg, Myrtil L
Topological analysis of the metal-metal bond: A tutorial review Christine Lepetit, Pierre Fau, Katia Fajerwerg, Myrtil L. Kahn, Bernard Silvi To cite this version: Christine Lepetit, Pierre Fau, Katia Fajerwerg, Myrtil L. Kahn, Bernard Silvi. Topological analysis of the metal-metal bond: A tutorial review. Coordination Chemistry Reviews, Elsevier, 2017, 345, pp.150-181. 10.1016/j.ccr.2017.04.009. hal-01540328 HAL Id: hal-01540328 https://hal.sorbonne-universite.fr/hal-01540328 Submitted on 16 Jun 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Topological analysis of the metal-metal bond: a tutorial review Christine Lepetita,b, Pierre Faua,b, Katia Fajerwerga,b, MyrtilL. Kahn a,b, Bernard Silvic,∗ aCNRS, LCC (Laboratoire de Chimie de Coordination), 205, route de Narbonne, BP 44099, F-31077 Toulouse Cedex 4, France. bUniversité de Toulouse, UPS, INPT, F-31077 Toulouse Cedex 4, i France cSorbonne Universités, UPMC, Univ Paris 06, UMR 7616, Laboratoire de Chimie Théorique, case courrier 137, 4 place Jussieu, F-75005 Paris, France Abstract This contribution explains how the topological methods of analysis of the electron density and related functions such as the electron localization function (ELF) and the electron localizability indicator (ELI-D) enable the theoretical characterization of various metal-metal (M-M) bonds (multiple M-M bonds, dative M-M bonds). -
(T = C/Si/Ge): the Uniqueness of Carbon Bonds in Tetrel Bonds
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 13 September 2018 doi:10.20944/preprints201809.0228.v1 Inter/intramolecular Bonds in TH5+ (T = C/Si/Ge): The Uniqueness of Carbon bonds in Tetrel Bonds Sharon Priya Gnanasekar and Elangannan Arunan* Department of Inorganic and Physical Chemistry Indian Institute of Science, Bangalore. 560012 INDIA * Email: [email protected] Abstract Atoms in Molecules (AIM), Natural Bond Orbital (NBO), and normal coordinate analysis have been carried out at the global minimum structures of TH5+ (T = C/Si/Ge). All these analyses lead to a consistent structure for these three protonated TH4 molecules. The CH5+ has a structure with three short and two long C-H covalent bonds and no H-H bond. Hence, the popular characterization of protonated methane as a weakly bound CH3+ and H2 is inconsistent with these results. However, SiH5+ and GeH5+ are both indeed a complex formed between TH3+ and H2 stabilized by a tetrel bond, with the H2 being the tetrel bond acceptor. The three-center-two-electron bond (3c-2e) in CH5+ has an open structure, which can be characterized as a V-type 3c-2e bond and that found in SiH5+ and GeH5+ is a T-type 3c-2e bond. This difference could be understood based on the typical C-H, Si-H, Ge-H and H-H bond energies. Moreover, this structural difference observed in TH5+ can explain the trend in proton affinity of TH4. Carbon is selective in forming a ‘tetrel bond’ and when it does, it might be worthwhile to highlight it as a ‘carbon bond’. -
Rutherford's Nuclear World: the Story of the Discovery of the Nuc
Rutherford's Nuclear World: The Story of the Discovery of the Nuc... http://www.aip.org/history/exhibits/rutherford/sections/atop-physic... HOME SECTIONS CREDITS EXHIBIT HALL ABOUT US rutherford's explore the atom learn more more history of learn about aip's nuclear world with rutherford about this site physics exhibits history programs Atop the Physics Wave ShareShareShareShareShareMore 9 RUTHERFORD BACK IN CAMBRIDGE, 1919–1937 Sections ← Prev 1 2 3 4 5 Next → In 1962, John Cockcroft (1897–1967) reflected back on the “Miraculous Year” ( Annus mirabilis ) of 1932 in the Cavendish Laboratory: “One month it was the neutron, another month the transmutation of the light elements; in another the creation of radiation of matter in the form of pairs of positive and negative electrons was made visible to us by Professor Blackett's cloud chamber, with its tracks curled some to the left and some to the right by powerful magnetic fields.” Rutherford reigned over the Cavendish Lab from 1919 until his death in 1937. The Cavendish Lab in the 1920s and 30s is often cited as the beginning of modern “big science.” Dozens of researchers worked in teams on interrelated problems. Yet much of the work there used simple, inexpensive devices — the sort of thing Rutherford is famous for. And the lab had many competitors: in Paris, Berlin, and even in the U.S. Rutherford became Cavendish Professor and director of the Cavendish Laboratory in 1919, following the It is tempting to simplify a complicated story. Rutherford directed the Cavendish Lab footsteps of J.J. Thomson. Rutherford died in 1937, having led a first wave of discovery of the atom. -
New 78 Covers
NATIONAL ACADEMY OF SCIENCES ROBERT SANDERSON MULLIKEN 1896–1986 A Biographical Memoir by R. STEPHEN BERRY Biographical Memoirs, VOLUME 78 PUBLISHED 2000 BY THE NATIONAL ACADEMY PRESS WASHINGTON, D.C. Photo credit: Photo by Harris & Ewing, Washington, D.C. ROBERT SANDERSON MULLIKEN June 7, 1896-October 31, 1986 BY R. STEPHEN BERRY OBERT S. MULLIKEN WAS a quiet, soft-spoken man, yet so R single-minded and determined in his devotion to under- standing molecules that he came to be called “Mr. Molecule.” If any single person’s ideas and teachings dominated the development of our understanding of molecular structure and spectra, it surely was Robert Mulliken. From the begin- ning of his career as an independent scientist in the mid- 1920s until he published his last scientific papers in the early 1980s, he guided an entire field through his penetrat- ing solutions of outstanding puzzles, his identification (or discovery) and analysis of the new major problems ripe for study, and his creation of a school—the Laboratory of Molecular Structure and Spectroscopy or LMSS at the University of Chicago, during its existence the most impor- tant center in the world for the study of molecules. Robert’s background led him naturally into academic sci- ence. He was born in Newburyport, Massachusetts, in a house built by his great-grandfather in about 1798. His father, Samuel Parsons Mulliken, was a professor of chemistry at MIT, which made him a daily commuter between Newburyport and Boston. Samuel Mulliken and his child- hood friend and later MIT colleague Arthur A. Noyes were 3 4 BIOGRAPHICAL MEMOIRS strong influences stirring Robert’s interests in science. -
Curriculum Vitae Daniel M
CURRICULUM VITAE DANIEL M. NEUMARK Personal: Born March 27, 1955; Chicago, Illinois Degrees: Ph.D., Physical Chemistry, University of California, Berkeley 1984 Thesis Advisor: Professor Yuan T. Lee Thesis Title: High Resolution Reactive Scattering M.A., Chemistry, Harvard University, 1977 B.A., Chemistry and Physics, Harvard University, 1977 (with highest honors) Honors and Awards: Peter Debye Award in Physical Chemistry, American Chemical Society, 2019 Bourke Award, Royal Society of Chemistry, 2018 Member, National Academy of Sciences, 2015 Fellow, Royal Society of Chemistry, 2013 Chemical Dynamics Award, Royal Society of Chemistry, 2013 Herbert P. Broida Prize, American Physical Society, 2013 Fellow, American Chemical Society, 2010 Dudley R. Herschbach Medal, 2009 Irving Langmuir Award in Chemical Physics, American Chemical Society, 2008 William F. Meggers Award, Optical Society of America, 2005 Visiting Röentgen Professor, University of Würzburg, 2002 Bomem-Michelson Award, 2002 ACS Nobel Laureate Signature Award, 2001 (with Martin Zanni) Fellow of American Academy of Arts and Sciences, 2000 Miller Research Professorship, UC Berkeley, 1999 - 2000 Alexander von Humboldt Senior Scientist, 1997 Fellow, American Association for the Advancement of Science, 1994 Invited Professor, University of Paris-Sud, Orsay, France, 1993 Fellow, American Physical Society, 1993 Camille and Henry Dreyfus Teacher-Scholar Award, 1991 Alfred P. Sloan Fellowship, 1989 National Science Foundation Presidential Young Investigator Award, 1988 Office of Naval Research -
Is There an Acid Strong Enough to Dissolve Glass? – Superacids
ARTICLE Is there an acid strong enough to dissolve glass? – Superacids For anybody who watched cartoons growing up, the word unit is based on how acids behave in water, however as acid probably springs to mind images of gaping holes being very strong acids react extremely violently in water this burnt into the floor by a spill, and liquid that would dissolve scale cannot be used for the pure ‘common’ acids (nitric, anything you drop into it. The reality of the acids you hydrochloric and sulphuric) or anything stronger than them. encounter in schools, and most undergrad university Instead, a different unit, the Hammett acidity function (H0), courses is somewhat underwhelming – sure they will react is often preferred when discussing superacids. with chemicals, but, if handled safely, where’s the drama? A superacid can be defined as any compound with an People don’t realise that these extraordinarily strong acids acidity greater than 100% pure sulphuric acid, which has a do exist, they’re just rarely seen outside of research labs Hammett acidity function (H0) of −12 [1]. Modern definitions due to their extreme potency. These acids are capable of define a superacid as a medium in which the chemical dissolving almost anything – wax, rocks, metals (even potential of protons is higher than it is in pure sulphuric acid platinum), and yes, even glass. [2]. Considering that pure sulphuric acid is highly corrosive, you can be certain that anything more acidic than that is What are Superacids? going to be powerful. What are superacids? Its all in the name – super acids are intensely strong acids. -
Chapter 4, Lesson 5: Energy Levels, Electrons, and Ionic Bonding
Chapter 4, Lesson 5: Energy Levels, Electrons, and Ionic Bonding Key Concepts • The attractions between the protons and electrons of atoms can cause an electron to move completely from one atom to the other. • When an atom loses or gains an electron, it is called an ion. • The atom that loses an electron becomes a positive ion. • The atom that gains an electron becomes a negative ion. • A positive and negative ion attract each other and form an ionic bond. Summary Students will look at animations and make drawings of the ionic bonding of sodium chloride (NaCl). Students will see that both ionic and covalent bonding start with the attractions of pro- tons and electrons between different atoms. But in ionic bonding, electrons are transferred from one atom to the other and not shared like in covalent bonding. Students will use Styrofoam balls to make models of the ionic bonding in sodium chloride (salt). Objective Students will be able to explain the process of the formation of ions and ionic bonds. Evaluation The activity sheet will serve as the “Evaluate” component of each 5-E lesson plan. The activity sheets are formative assessments of student progress and understanding. A more formal summa- tive assessment is included at the end of each chapter. Safety Be sure you and the students wear properly fitting goggles. Materials for Each Group • Black paper • Salt • Cup with salt from evaporated saltwater • Magnifier • Permanent marker Materials for Each Student • 2 small Styrofoam balls • 2 large Styrofoam balls • 2 toothpicks ©2016 American Chemical Society Middle School Chemistry - www.middleschoolchemistry.com 337 Note: In an ionically bonded substance such as NaCl, the smallest ratio of positive and negative ions bonded together is called a “formula unit” rather than a “molecule.” Technically speaking, the term “molecule” refers to two or more atoms that are bonded together covalently, not ioni- cally. -
Pauling-Linus.Pdf
NATIONAL ACADEMY OF SCIENCES L I N U S C A R L P A U L I N G 1901—1994 A Biographical Memoir by J A C K D. D UNITZ Any opinions expressed in this memoir are those of the author(s) and do not necessarily reflect the views of the National Academy of Sciences. Biographical Memoir COPYRIGHT 1997 NATIONAL ACADEMIES PRESS WASHINGTON D.C. LINUS CARL PAULING February 28, 1901–August 19, 1994 BY JACK D. DUNITZ INUS CARL PAULING was born in Portland, Oregon, on LFebruary 28, 1901, and died at his ranch at Big Sur, California, on August 19, 1994. In 1922 he married Ava Helen Miller (died 1981), who bore him four children: Linus Carl, Peter Jeffress, Linda Helen (Kamb), and Edward Crellin. Pauling is widely considered the greatest chemist of this century. Most scientists create a niche for themselves, an area where they feel secure, but Pauling had an enormously wide range of scientific interests: quantum mechanics, crys- tallography, mineralogy, structural chemistry, anesthesia, immunology, medicine, evolution. In all these fields and especially in the border regions between them, he saw where the problems lay, and, backed by his speedy assimilation of the essential facts and by his prodigious memory, he made distinctive and decisive contributions. He is best known, perhaps, for his insights into chemical bonding, for the discovery of the principal elements of protein secondary structure, the alpha-helix and the beta-sheet, and for the first identification of a molecular disease (sickle-cell ane- mia), but there are a multitude of other important contri- This biographical memoir was prepared for publication by both The Royal Society of London and the National Academy of Sciences of the United States of America. -
Constraint Closure Drove Major Transitions in the Origins of Life
entropy Article Constraint Closure Drove Major Transitions in the Origins of Life Niles E. Lehman 1 and Stuart. A. Kauffman 2,* 1 Edac Research, 1879 Camino Cruz Blanca, Santa Fe, NM 87505, USA; [email protected] 2 Institute for Systems Biology, Seattle, WA 98109, USA * Correspondence: [email protected] Abstract: Life is an epiphenomenon for which origins are of tremendous interest to explain. We provide a framework for doing so based on the thermodynamic concept of work cycles. These cycles can create their own closure events, and thereby provide a mechanism for engendering novelty. We note that three significant such events led to life as we know it on Earth: (1) the advent of collective autocatalytic sets (CASs) of small molecules; (2) the advent of CASs of reproducing informational polymers; and (3) the advent of CASs of polymerase replicases. Each step could occur only when the boundary conditions of the system fostered constraints that fundamentally changed the phase space. With the realization that these successive events are required for innovative forms of life, we may now be able to focus more clearly on the question of life’s abundance in the universe. Keywords: origins of life; constraint closure; RNA world; novelty; autocatalytic sets 1. Introduction The plausibility of life in the universe is a hotly debated topic. As of today, life is only known to exist on Earth. Thus, it may have been a singular event, an infrequent event, or a common event, albeit one that has thus far evaded our detection outside our own planet. Herein, we will not attempt to argue for any particular frequency of life.