Molecular Phylogeny of Laetiporus and Other Brown Rot Polypore Genera in North America
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Molecular Phylogeny of Laetiporus and Other Brown Rot Polypore Genera in North America
Mycologia, 100(3), 2008, pp. 417–430. DOI: 10.3852/07-124R2 # 2008 by The Mycological Society of America, Lawrence, KS 66044-8897 Molecular phylogeny of Laetiporus and other brown rot polypore genera in North America Daniel L. Lindner1 Key words: evolution, Fungi, Macrohyporia, Mark T. Banik Polyporaceae, Poria, root rot, sulfur shelf, Wolfiporia U.S.D.A. Forest Service, Madison Field Office of the extensa Northern Research Station, Center for Forest Mycology Research, One Gifford Pinchot Drive, Madison, Wisconsin 53726 INTRODUCTION The genera Laetiporus Murrill, Leptoporus Que´l., Phaeolus (Pat.) Pat., Pycnoporellus Murrill and Wolfi- Abstract: Phylogenetic relationships were investigat- poria Ryvarden & Gilb. contain species that possess ed among North American species of Laetiporus, simple septate hyphae, cause brown rots and produce Leptoporus, Phaeolus, Pycnoporellus and Wolfiporia annual, polyporoid fruiting bodies with hyaline using ITS, nuclear large subunit and mitochondrial spores. These shared morphological and physiologi- small subunit rDNA sequences. Members of these cal characters have been considered important in genera have poroid hymenophores, simple septate traditional polypore taxonomy (e.g. Gilbertson and hyphae and cause brown rots in a variety of substrates. Ryvarden 1986, Gilbertson and Ryvarden 1987, Analyses indicate that Laetiporus and Wolfiporia are Ryvarden 1991). However recent molecular work not monophyletic. All North American Laetiporus indicates that Laetiporus, Phaeolus and Pycnoporellus species formed a well supported monophyletic group fall within the ‘‘Antrodia clade’’ of true polypores (the ‘‘core Laetiporus clade’’ or Laetiporus s.s.) with identified by Hibbett and Donoghue (2001) while the exception of L. persicinus, which showed little Leptoporus and Wolfiporia fall respectively within the affinity for any genus for which sequence data are ‘‘phlebioid’’ and ‘‘core polyporoid’’ clades of true available. -
Basidiomycota) in Finland
Mycosphere 7 (3): 333–357(2016) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/7/3/7 Copyright © Guizhou Academy of Agricultural Sciences Extensions of known geographic distribution of aphyllophoroid fungi (Basidiomycota) in Finland Kunttu P1, Kulju M2, Kekki T3, Pennanen J4, Savola K5, Helo T6 and Kotiranta H7 1University of Eastern Finland, School of Forest Sciences, P.O. Box 111, FI-80101 Joensuu, Finland 2Biodiversity Unit P.O. Box 3000, FI-90014 University of Oulu, Finland 3Jyväskylä University Museum, Natural History Section, P.O. BOX 35, FI-40014 University of Jyväskylä, Finland 4Pentbyntie 1 A 2, FI-10300 Karjaa, Finland 5The Finnish Association for Nature Conservation, Itälahdenkatu 22 b A, FI-00210 Helsinki, Finland 6Erätie 13 C 19, FI-87200 Kajaani, Finland 7Finnish Environment Institute, P.O. Box 140, FI-00251 Helsinki, Finland Kunttu P, Kulju M, Kekki T, Pennanen J, Savola K, Helo T, Kotiranta H 2016 – Extensions of known geographic distribution of aphyllophoroid fungi (Basidiomycota) in Finland. Mycosphere 7(3), 333–357, Doi 10.5943/mycosphere/7/3/7 Abstract This article contributes the knowledge of Finnish aphyllophoroid funga with nationally or regionally new species, and records of rare species. Ceriporia bresadolae, Clavaria tenuipes and Renatobasidium notabile are presented as new aphyllophoroid species to Finland. Ceriporia bresadolae and R. notabile are globally rare species. The records of Ceriporia aurantiocarnescens, Crustomyces subabruptus, Sistotrema autumnale, Trechispora elongata, and Trechispora silvae- ryae are the second in Finland. New records (or localities) are provided for 33 species with no more than 10 records in Finland. In addition, 76 records of aphyllophoroid species are reported as new to some subzones of the boreal vegetation zone in Finland. -
A Phylogenetic Overview of the Antrodia Clade (Basidiomycota, Polyporales)
Mycologia, 105(6), 2013, pp. 1391–1411. DOI: 10.3852/13-051 # 2013 by The Mycological Society of America, Lawrence, KS 66044-8897 A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales) Beatriz Ortiz-Santana1 phylogenetic studies also have recognized the genera Daniel L. Lindner Amylocystis, Dacryobolus, Melanoporia, Pycnoporellus, US Forest Service, Northern Research Station, Center for Sarcoporia and Wolfiporia as part of the antrodia clade Forest Mycology Research, One Gifford Pinchot Drive, (SY Kim and Jung 2000, 2001; Binder and Hibbett Madison, Wisconsin 53726 2002; Hibbett and Binder 2002; SY Kim et al. 2003; Otto Miettinen Binder et al. 2005), while the genera Antrodia, Botanical Museum, University of Helsinki, PO Box 7, Daedalea, Fomitopsis, Laetiporus and Sparassis have 00014, Helsinki, Finland received attention in regard to species delimitation (SY Kim et al. 2001, 2003; KM Kim et al. 2005, 2007; Alfredo Justo Desjardin et al. 2004; Wang et al. 2004; Wu et al. 2004; David S. Hibbett Dai et al. 2006; Blanco-Dios et al. 2006; Chiu 2007; Clark University, Biology Department, 950 Main Street, Worcester, Massachusetts 01610 Lindner and Banik 2008; Yu et al. 2010; Banik et al. 2010, 2012; Garcia-Sandoval et al. 2011; Lindner et al. 2011; Rajchenberg et al. 2011; Zhou and Wei 2012; Abstract: Phylogenetic relationships among mem- Bernicchia et al. 2012; Spirin et al. 2012, 2013). These bers of the antrodia clade were investigated with studies also established that some of the genera are molecular data from two nuclear ribosomal DNA not monophyletic and several modifications have regions, LSU and ITS. A total of 123 species been proposed: the segregation of Antrodia s.l. -
Biocatalytic Potential of Native Basidiomycetes from Colombia for Flavour/Aroma Production
molecules Article Biocatalytic Potential of Native Basidiomycetes from Colombia for Flavour/Aroma Production David A. Jaramillo 1 , María J. Méndez 1 , Gabriela Vargas 1 , Elena E. Stashenko 2 , Aída-M. Vasco-Palacios 3 , Andrés Ceballos 1 and Nelson H. Caicedo 1,* 1 Department of Biochemical Engineering, Universidad Icesi, Calle 18 No. 122–135 Pance, Cali 760031, Colombia; [email protected] (D.A.J.); [email protected] (M.J.M.); [email protected] (G.V.); [email protected] (A.C.) 2 Universidad Industrial de Santander. Chromatography and Mass Spectrometry Center, Calle 9 Carrera 27, Bucaramanga 680002, Colombia; [email protected] 3 Grupo de Microbiología Ambiental—BioMicro, Escuela de Microbiología, Universidad de Antioquia, UdeA, Calle 70 No. 52–21, Medellín 050010, Colombia; [email protected] * Correspondence: [email protected]; Tel.: +573187548041 Academic Editor: Francisco Leon Received: 31 July 2020; Accepted: 15 September 2020; Published: 22 September 2020 Abstract: Aromas and flavours can be produced from fungi by either de novo synthesis or biotransformation processes. Herein, the biocatalytic potential of seven basidiomycete species from Colombia fungal strains isolated as endophytes or basidioma was evaluated. Ganoderma webenarium, Ganoderma chocoense, and Ganoderma stipitatum were the most potent strains capable of decolourizing β,β-carotene as evidence of their potential as biocatalysts for de novo aroma synthesis. Since a species’ biocatalytic potential cannot solely be determined via qualitative screening using β,β-carotene biotransformation processes, we focused on using α-pinene biotransformation with mycelium as a measure of catalytic potential. Here, two strains of Trametes elegans—namely, the endophytic (ET-06) and basidioma (EBB-046) strains—were screened. -
Mushrumors the Newsletter of the Northwest Mushroomers Association Volume 20 Issue 3 September - November 2009
MushRumors The Newsletter of the Northwest Mushroomers Association Volume 20 Issue 3 September - November 2009 2009 Mushroom Season Blasts into October with a Flourish A Surprising Turnout at the Annual Fall Show by Our Fungal Friends, and a Visit by David Arora Highlighted this Extraordinary Year for the Northwest Mushroomers On the heels of a year where the weather in Northwest Washington could be described as anything but nor- mal, to the surprise of many, include yours truly, it was actually a good year for mushrooms and the Northwest Mushroomers Association shined again at our traditional fall exhibit. The members, as well as the mushrooms, rose to the occasion, despite brutal conditions for collecting which included a sideways driving rain (which we photo by Pam Anderson thought had come too late), and even a thunderstorm, as we prepared to gather for the greatly anticipated sorting of our catch at the hallowed Bloedel Donovan Community Building. I wondered, not without some trepidation, about what fungi would actually show up for this years’ event. Buck McAdoo, Dick Morrison, and I had spent several harrowing hours some- what lost in the woods off the South Pass Road in a torrential downpour, all the while being filmed for posterity by Buck’s step-son, Travis, a videographer creating a documentary about mushrooming. I had to wonder about the resolve of our mem- bers to go forth in such conditions in or- In This Issue: Fabulous first impressions: Marjorie Hooks der to find the mush- David Arora Visits Bellingham crafted another artwork for the centerpiece. -
A Preliminary Checklist of Arizona Macrofungi
A PRELIMINARY CHECKLIST OF ARIZONA MACROFUNGI Scott T. Bates School of Life Sciences Arizona State University PO Box 874601 Tempe, AZ 85287-4601 ABSTRACT A checklist of 1290 species of nonlichenized ascomycetaceous, basidiomycetaceous, and zygomycetaceous macrofungi is presented for the state of Arizona. The checklist was compiled from records of Arizona fungi in scientific publications or herbarium databases. Additional records were obtained from a physical search of herbarium specimens in the University of Arizona’s Robert L. Gilbertson Mycological Herbarium and of the author’s personal herbarium. This publication represents the first comprehensive checklist of macrofungi for Arizona. In all probability, the checklist is far from complete as new species await discovery and some of the species listed are in need of taxonomic revision. The data presented here serve as a baseline for future studies related to fungal biodiversity in Arizona and can contribute to state or national inventories of biota. INTRODUCTION Arizona is a state noted for the diversity of its biotic communities (Brown 1994). Boreal forests found at high altitudes, the ‘Sky Islands’ prevalent in the southern parts of the state, and ponderosa pine (Pinus ponderosa P.& C. Lawson) forests that are widespread in Arizona, all provide rich habitats that sustain numerous species of macrofungi. Even xeric biomes, such as desertscrub and semidesert- grasslands, support a unique mycota, which include rare species such as Itajahya galericulata A. Møller (Long & Stouffer 1943b, Fig. 2c). Although checklists for some groups of fungi present in the state have been published previously (e.g., Gilbertson & Budington 1970, Gilbertson et al. 1974, Gilbertson & Bigelow 1998, Fogel & States 2002), this checklist represents the first comprehensive listing of all macrofungi in the kingdom Eumycota (Fungi) that are known from Arizona. -
9B Taxonomy to Genus
Fungus and Lichen Genera in the NEMF Database Taxonomic hierarchy: phyllum > class (-etes) > order (-ales) > family (-ceae) > genus. Total number of genera in the database: 526 Anamorphic fungi (see p. 4), which are disseminated by propagules not formed from cells where meiosis has occurred, are presently not grouped by class, order, etc. Most propagules can be referred to as "conidia," but some are derived from unspecialized vegetative mycelium. A significant number are correlated with fungal states that produce spores derived from cells where meiosis has, or is assumed to have, occurred. These are, where known, members of the ascomycetes or basidiomycetes. However, in many cases, they are still undescribed, unrecognized or poorly known. (Explanation paraphrased from "Dictionary of the Fungi, 9th Edition.") Principal authority for this taxonomy is the Dictionary of the Fungi and its online database, www.indexfungorum.org. For lichens, see Lecanoromycetes on p. 3. Basidiomycota Aegerita Poria Macrolepiota Grandinia Poronidulus Melanophyllum Agaricomycetes Hyphoderma Postia Amanitaceae Cantharellales Meripilaceae Pycnoporellus Amanita Cantharellaceae Abortiporus Skeletocutis Bolbitiaceae Cantharellus Antrodia Trichaptum Agrocybe Craterellus Grifola Tyromyces Bolbitius Clavulinaceae Meripilus Sistotremataceae Conocybe Clavulina Physisporinus Trechispora Hebeloma Hydnaceae Meruliaceae Sparassidaceae Panaeolina Hydnum Climacodon Sparassis Clavariaceae Polyporales Gloeoporus Steccherinaceae Clavaria Albatrellaceae Hyphodermopsis Antrodiella -
In Brazil: a New Species and a New Record
The genus Laetiporus (Basidiomycota) in Brazil: a new species and a new record Ricardo Matheus Pires (1), Viviana Motato-Vásquez (1) & Adriana de Mello Gugliotta (1) (1) Avenida Miguel Stefano, 3687. Núcleo de Pesquisa em Micologia, Instituto de Botânica, São Paulo-SP. Corresponding author: [email protected] Abstract: Laetiporus squalidus is described as a the taxon currently known in North America as L. new species; it is distinguished by effused- sulphureus (cluster E) and other ten individual, all reflexed basidioma with numerous small and collected exclusively from eucalypts, grouped into a broadly attached pilei, cream to pale brown well-supported cluster with L. gilbertsonii Burds. when fresh to light ochraceous after dry upper (cluster F). Surprisingly, a second taxon (cluster C) surface and ellipsoid to broadly ellipsoid included 49 individual of Laetiporus with a host range basidiospores. Phylogenetic analysis with ITS and and distribution exclusively from Europe did not nLSU regions corroborate the position and group with any of the Laetiporus species defined identity of this species. Furthermore, L. from North America by Lindner & Banik (2008). gilbertsonii, a Pan-American species, is recorded This discovery calls into doubt the propriety to for first time from Brazil, based on ITS region and use the European name L. sulphureus for the taxon a more accurate analysis of morphological occurring in North America. Further morphological characteristics. studies of macro- and microscopic traits and a more Key words: mycodiversity, neotropical, details knowledge of host range and distribution of polypores, xylophilous fungi both taxon occurring in America (cluster F) and Europe (cluster C) is necessary before a definition of INTRODUCTION L. -
On Fennoscandian Polypores 7. the Genus Pycnoporellus
Karstenia 20: 1-15. 1980 On Fennoscandian polypores 7. The genus Pycnoporellus TUOMO NIEMELA NIEMELA, T. 1980: On Fennoscandian polypores 7. The genus Pycnoporellus. - Karstenia 20: 1-15. Descriptions are given of the two species of Pycnoporellus occurring in Fennoscandia, P. alboluteus (Ell. & Ev.) Kotl. & Pouz. and P. fulgens (Fr.) Donk. Their distributions in North Europe are mapped, and their world distributions reviewed. Their ecology, phenology, host relationships, and cultural and microscopical characters are discussed. Great variability exists in the microscopical characters of both species. P. alboluteus is very rare in North Europe, where it has been recorded from only two localities in northern Finland, on Picea abies and once on Alnus incana. P. fulgens is rare and south-eastern in distribution, being known from four Swedish localities and several localities in southern Finland and the adjacent U.S.S.R., mostly on Picea abies, but also on Pinus sylvestris, Populus tremula and Betula. Study of the types indicates that the names frpex woronowii Bres. and Lenzites sepiaria var. dentifera Peck are synonymous with P. alboluteus, and that Ochroporus lithuanicus BYonski (type selected), Polyporus aurantiacus Peck and P. fibrillosus Karst. are synonymous with P. fulgens. The taxonomic position of the genus Pycnopore/lus is discussed. Tuomo Niemela, Department of Botany, University of Helsinki, Unioninkatu 44, SF - 00170 Helsinki 17, Finland. Introduction Materials and methods The genus Pycnoporellus Murrill comprises two The descriptions are based on the specimens deposited in the species in Europe, both rather rare inhabitants of old herbaria GB, H, HFR, OULU, S, TUR, UPS, and the spruce-dominated forests. -
Edital 8 2019 Fungos Web.Pdf
where a brownish viscous mass is distributed. This viscous mass exudes Detalhes Técnicos Technical Details EDITAL an unpleasant odor that attracts insects to the dispersion of spores. The Edital nº 8 Stamp issue N. 8 species occurs in several tropical and subtropical countries and is generally Fotos: Larissa Trierveiler Pereira Photos: Larissa Trierveiler Pereira 8/2019 e Vitor Xavier de Lima, Ricardo and Vitor Xavier de Lima, Ricardo found on the ground in pasture areas. Matheus Pires e Marcelo Pinto Matheus Pires and Marcelo Pinto Geastrum violaceum Rick Marcelli - Instituto de Botânica Marcelli - Botanical Institute Emissão Postal Especial Classification: Basidiomycota, Agaricomycetes, Geastrales, Arte-finalização: Daniel Effi/Correios Art finishing: Daniel Effi/Correios Processo de Impressão: ofsete Print system: offset Série Mercosul: Diversidade de Geastraceae. Popular name in Brazil: Violet-Earth-Star Papel: cuchê gomado Paper: gummed chalky paper This beautiful earth-star fungus has purple to violet rays. They are Folha com 24 selos (4 sextilhas) Sheet with 20 stamps (4 sets of six) FUNGOS small basidiomes, of 1 to 3 cm, and grow in the soil of the forests, among Valor facial: R$ 1,60 Facial value: R$ 1.60 Tiragem: 240.000 selos (40.000 de Issue: 240,000 stamps (40,000 of the plant litter. In Brazil, it is found in Atlantic Forest areas. The species was cada) each) Special Postal Issue Mercosul Series: Diversity of Fungi first discovered in the region of São Leopoldo (Rio Grande do Sul state) Área de desenho: 30 x 40mm e 40x30 Design area: 30 x 40mm and 40x30 Dimensão do selo: 30 x 40mm e 40x30 Stamp dimensions: 30 x 40mm and in the early twentieth century, but today it is also known in Argentina, Picotagem: 12 x 11,5 e 11,5 x 12 40x30 Paraguay and Mexico. -
Polyporales, Basidiomycota), a New Polypore Species and Genus from Finland
Ann. Bot. Fennici 54: 159–167 ISSN 0003-3847 (print) ISSN 1797-2442 (online) Helsinki 18 April 2017 © Finnish Zoological and Botanical Publishing Board 2017 Caudicicola gracilis (Polyporales, Basidiomycota), a new polypore species and genus from Finland Heikki Kotiranta1,*, Matti Kulju2 & Otto Miettinen3 1) Finnish Environment Institute, Natural Environment Centre, P.O. Box 140, FI-00251 Helsinki, Finland (*corresponding author’s e-mail: [email protected]) 2) Biodiversity Unit, P.O. Box 3000, FI-90014 University of Oulu, Finland 3) Finnish Museum of Natural History, Botanical Museum, P.O. Box 7, FI-00014 University of Helsinki, Finland Received 10 Jan. 2017, final version received 23 Mar. 2017, accepted 27 Mar. 2017 Kotiranta H., Kulju M. & Miettinen O. 2017: Caudicicola gracilis (Polyporales, Basidiomycota), a new polypore species and genus from Finland. — Ann. Bot. Fennici 54: 159–167. A new monotypic polypore genus, Caudicicola Miettinen, Kotir. & Kulju, is described for the new species C. gracilis Kotir., Kulju & Miettinen. The species was collected in central Finland from Picea abies and Pinus sylvestris stumps, where it grew on undersides of stumps and roots. Caudicicola gracilis is characterized by very fragile basidiocarps, monomitic hyphal structure with clamps, short and wide tramal cells, smooth ellipsoid spores, basidia with long sterigmata and conidiogenous areas in the margins of the basidiocarp producing verrucose, slightly thick-walled conidia. The genus belongs to the residual polyporoid clade of the Polyporales in the vicinity of Steccherinaceae, but has no known close relatives. Introduction sis taxicola, Pycnoporellus fulgens and its suc- cessional predecessor Fomitopsis pinicola, and The species described here was found when deciduous tree trunks had such seldom collected Heino Kulju, the brother of the second author, species as Athelopsis glaucina (on Salix) and was making a forest road for tractors. -
Polypore Diversity in North America with an Annotated Checklist
Mycol Progress (2016) 15:771–790 DOI 10.1007/s11557-016-1207-7 ORIGINAL ARTICLE Polypore diversity in North America with an annotated checklist Li-Wei Zhou1 & Karen K. Nakasone2 & Harold H. Burdsall Jr.2 & James Ginns3 & Josef Vlasák4 & Otto Miettinen5 & Viacheslav Spirin5 & Tuomo Niemelä 5 & Hai-Sheng Yuan1 & Shuang-Hui He6 & Bao-Kai Cui6 & Jia-Hui Xing6 & Yu-Cheng Dai6 Received: 20 May 2016 /Accepted: 9 June 2016 /Published online: 30 June 2016 # German Mycological Society and Springer-Verlag Berlin Heidelberg 2016 Abstract Profound changes to the taxonomy and classifica- 11 orders, while six other species from three genera have tion of polypores have occurred since the advent of molecular uncertain taxonomic position at the order level. Three orders, phylogenetics in the 1990s. The last major monograph of viz. Polyporales, Hymenochaetales and Russulales, accom- North American polypores was published by Gilbertson and modate most of polypore species (93.7 %) and genera Ryvarden in 1986–1987. In the intervening 30 years, new (88.8 %). We hope that this updated checklist will inspire species, new combinations, and new records of polypores future studies in the polypore mycota of North America and were reported from North America. As a result, an updated contribute to the diversity and systematics of polypores checklist of North American polypores is needed to reflect the worldwide. polypore diversity in there. We recognize 492 species of polypores from 146 genera in North America. Of these, 232 Keywords Basidiomycota . Phylogeny . Taxonomy . species are unchanged from Gilbertson and Ryvarden’smono- Wood-decaying fungus graph, and 175 species required name or authority changes.