Evidence for Poecilogony in Pygospio Elegans (Polychaeta: Spionidae)
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A Comprehensive Wetland Program for Fringing Salt Marshes in the Ory K River, Maine Pamela A
University of New England DUNE: DigitalUNE Environmental Studies Faculty Publications Environmental Studies Department 5-31-2007 A Comprehensive Wetland Program For Fringing Salt Marshes In The orY k River, Maine Pamela A. Morgan University of New England, [email protected] Jeremy Miller Wells National Estuarine Research Reserve Christopher Cayce Dalton Wells National Estuarine Research Reserve Michele Dionne Wells National Estuarine Research Reserve Follow this and additional works at: http://dune.une.edu/env_facpubs Part of the Environmental Health and Protection Commons, Environmental Indicators and Impact Assessment Commons, Environmental Monitoring Commons, Marine Biology Commons, Plant Sciences Commons, and the Systems Biology Commons Recommended Citation Morgan, Pamela A.; Miller, Jeremy; Dalton, Christopher Cayce; and Dionne, Michele, "A Comprehensive Wetland Program For Fringing Salt Marshes In The orkY River, Maine" (2007). Environmental Studies Faculty Publications. Paper 3. http://dune.une.edu/env_facpubs/3 This Article is brought to you for free and open access by the Environmental Studies Department at DUNE: DigitalUNE. It has been accepted for inclusion in Environmental Studies Faculty Publications by an authorized administrator of DUNE: DigitalUNE. For more information, please contact [email protected]. A Comprehensive Wetland Program for Fringing Salt Marshes in the York River, Maine A Final Report Submitted to the Environmental Protection Agency by: Dr. Pamela Morgan1 Jeremy Miller2 Christopher Cayce Dalton2,3 Dr. Michele Dionne2 1 University of New England Department of Environmental Studies 11 Hills Beach Road, Biddeford ME 04009 2 Wells National Estuarine Research Reserve 342 Laudholm Farm Road, Wells ME 04090 3 Town of York 186 York Street, York ME 03909 May 31, 2007 Contents Executive Summary ........................................................................................................5 Introduction ................................................................................................................. -
Mitochondrial Genomes of Two Polydora
www.nature.com/scientificreports OPEN Mitochondrial genomes of two Polydora (Spionidae) species provide further evidence that mitochondrial architecture in the Sedentaria (Annelida) is not conserved Lingtong Ye1*, Tuo Yao1, Jie Lu1, Jingzhe Jiang1 & Changming Bai2 Contrary to the early evidence, which indicated that the mitochondrial architecture in one of the two major annelida clades, Sedentaria, is relatively conserved, a handful of relatively recent studies found evidence that some species exhibit elevated rates of mitochondrial architecture evolution. We sequenced complete mitogenomes belonging to two congeneric shell-boring Spionidae species that cause considerable economic losses in the commercial marine mollusk aquaculture: Polydora brevipalpa and Polydora websteri. The two mitogenomes exhibited very similar architecture. In comparison to other sedentarians, they exhibited some standard features, including all genes encoded on the same strand, uncommon but not unique duplicated trnM gene, as well as a number of unique features. Their comparatively large size (17,673 bp) can be attributed to four non-coding regions larger than 500 bp. We identifed an unusually large (putative) overlap of 14 bases between nad2 and cox1 genes in both species. Importantly, the two species exhibited completely rearranged gene orders in comparison to all other available mitogenomes. Along with Serpulidae and Sabellidae, Polydora is the third identifed sedentarian lineage that exhibits disproportionally elevated rates of mitogenomic architecture rearrangements. Selection analyses indicate that these three lineages also exhibited relaxed purifying selection pressures. Abbreviations NCR Non-coding region PCG Protein-coding gene Metazoan mitochondrial genomes (mitogenomes) usually encode the set of 37 genes, comprising 2 rRNAs, 22 tRNAs, and 13 proteins, encoded on both genomic strands. -
FAU Institutional Repository
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©1984 Elsevier B.V. This manuscript is an author version with the final publication available at http://www.sciencedirect.com/science/journal/00220981 and may be cited as: Wilson, W. H., Jr. (1984). Non‐overlapping distributions of spionid polychaetes: the relative importance of habitat and competition. Journal of Experimental Marine Biology and Ecology, 75(2), 119‐127. doi:10.1016/0022‐0981(84)90176‐X J. Exp. Mar. Bioi. Ecol., 1984, Vol. 75, pp. 119-127 119 Elsevier JEM 217 NON-OVERLAPPING DISTRIBUTIONS OF SPIONID POLYCHAETES: THE RELATIVE IMPORTANCE OF HABITAT AND COMPETITIONI W. HERBERT WILSON, JR. Harbor Branch Institution, Inc .. R.R. 1, Box 196, Fort Pierce, FL 33450. U.S.A. Abstract: The spionid polychaetes, Pygospio elegans Claparede, Pseudopolydora kempi (Southern), and Rhynchospio arenincola Hartman are found in False Bay, Washington. Two species, Pygospio elegans and Pseudopolydora kempi, co-occur in the high intertidal zone. The third species Rhynchospio arenincola occurs only in low intertidal areas. Reciprocal transplant experiments were used to test the importance of intraspecific density, interspecific density, and habitat on the survivorship of experimental animals. For all three species, only habitat had a significant effect. Individuals of each species survived better in experimental containers in their native habitat, regardless of the heterospecific and conspecific densities used in the experiments. The physical stresses associated with the prolonged exposure of the high intertidal site are experimentally shown to result in Rhynchospio mortality. From these experiments, habitat type is the only significant factor tested which can explain the observed distributions; the presence of confamilials has no detected effect on the survivorship of any species, suggesting that competition does not serve to maintain the patterns of distribution. -
Baltic Sea Genetic Biodiversity: Current Knowledge Relating to Conservation Management
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Brage IMR Received: 21 August 2016 Revised: 26 January 2017 Accepted: 16 February 2017 DOI: 10.1002/aqc.2771 REVIEW ARTICLE Baltic Sea genetic biodiversity: Current knowledge relating to conservation management Lovisa Wennerström1* | Eeva Jansson1,2* | Linda Laikre1 1 Department of Zoology, Stockholm University, SE‐106 91 Stockholm, Sweden Abstract 2 Institute of Marine Research, Bergen, 1. The Baltic Sea has a rare type of brackish water environment which harbours unique genetic Norway lineages of many species. The area is highly influenced by anthropogenic activities and is affected Correspondence by eutrophication, climate change, habitat modifications, fishing and stocking. Effective genetic Lovisa Wennerström, Department of Zoology, management of species in the Baltic Sea is highly warranted in order to maximize their potential SE‐106 91 Stockholm, Sweden. for survival, but shortcomings in this respect have been documented. Lack of knowledge is one Email: [email protected] reason managers give for why they do not regard genetic diversity in management. Funding information Swedish Research Council Formas (LL); The 2. Here, the current knowledge of population genetic patterns of species in the Baltic Sea is BONUS BAMBI Project supported by BONUS reviewed and summarized with special focus on how the information can be used in (Art 185), funded jointly by the European management. The extent to which marine protected areas (MPAs) protect genetic diversity Union and the Swedish Research Council Formas (LL); Swedish Cultural Foundation in is also investigated in a case study of four key species. -
Pygospio Elegans
Protistology 10 (4), 148–157 (2016) Protistology Metchnikovella dogieli sp. n. (Microsporidia: Metch- nikovellida), a parasite of archigregarines Selenidium sp. from polychaetes Pygospio elegans Gita G. Paskerova1, Ekaterina V. Frolova1, Magdaléna Kováčiková2, Tatiana S. Panfilkina1, Yelisei S. Mesentsev1, Alexey V. Smirnov1 and Elena S. Nassonova1,3 1 Department of Invertebrate Zoology, St Petersburg State University, Universitetskaya nab. 7/9, 199034 St Petersburg, Russian Federation 2 Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 61137 Brno, Czech Republic 3 Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Ave. 4, 194064 St Petersburg, Russian Federation | Submitted November 21, 2016 | Accepted December 10, 2016 | Summary Cysts and free spores of a metchnikovellid microsporidium were found in several specimens of an archigregarine Selenidium sp. isolated from polychaetes Pygospio elegans. Samples were collected at the littoral area of the Kandalaksha Bay of the White Sea in the year 2016. We examined this material with high-quality light optics in stained and live preparations. The structure of cysts and the host range suggest that this species belongs to the genus Metchnikovella Caullery et Mesnil, 1897. The length of the cysts varied from 9.5 to 34 µm (av. 23.8 µm); the width of the cysts was 4.8–9.2 µm (av. 8.2 µm). The number of cyst-bound spores varied from 7 to 18. Cyst-bound spores were oval or ovoid and arranged in two or three rows. The length of the spores was 2.2–3.0 µm (av. 2.6 µm); the width was 1.4–2.9 µm (av. -
Benthic Macroinvertebrate Sampling
Benthic Macroinvertebrate Sampling Norton Basin, Little Bay, Grass Hassock Channel, and the Raunt Submitted to: The Port Authority of New York and New Jersey New York State Department of Environmental Conservation Submitted by: Barry A. Vittor & Associates, Inc. Kingston, NY February 2003 TABLE OF CONTENTS 1.0 INTRODUCTION...............................................................................................1 2.0 STUDY AREA......................................................................................................3 2.1 Norton Basin........................................................................................................ 3 2.2 Little Bay ............................................................................................................. 3 2.3 Reference Areas.................................................................................................... 3 2.3.1 The Raunt .................................................................................................... 3 2.3.2 Grass Hassock Channel ............................................................................... 4 3.0 METHODS..........................................................................................................4 3.1 Benthic Grab Sampling......................................................................................... 4 4.0 RESULTS.............................................................................................................7 4.1 Benthic Macroinvertebrates................................................................................ -
FAU Institutional Repository
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©1980 Springer. This manuscript is an author version with the final publication available at http://www.springerlink.com and may be cited as: Eckelbarger, K. J. (1980). An ultrastructural study of oogenesis in Streblospio benedicti (Spionidae), with remarks on diversity of vitellogenic mechanisms in Polychaeta. Zoomorphologie, 94(3), 241‐263. doi:10.1007/BF00998204 euLO ~ \ Zoomorphologie 94,241 -263 (1980) Zoomorphologie © by Springer-Verlag 1980 An Ultrastructural Study of Oogenesis in Streblospio benedicti (Spionidae) , with Remarks on Diversity of Vitellogenic Mechanisms in Polychaeta Kevin J. Eckelbarger* Harbor Branch Foundation, Inc.,RR I, Boxl96,Fort Pierce, Fla. 33450, USA . Summary. The ultrastructural features of oogenesis were examined in the spionid polychaete Streblospio benedicti. Paired ovaries are attached to the genital blood vessels extending into the coe lomic space from the circumintes tinal sinus. The genital blood vessel wall is composed of flattened, peritoneal cells, large follicle cells and developing oocytes. Vitellogenesis occurs while the oocytes are attached to the blood vessel wall. Two morphologically distinguishable types of yolk are synthesized. Type I is synthesized first by an autosynthetic process apparently involving pinocytosis and the conjoined efforts of the Golgi complex and rough endoplasmic reticulum. Type II yolk appears later through a heterosynthetic process involving the infolding of the oolemma and the sequestering of materials from the blood vessel lumen by endocytosis. During this process, blood pigment molecules appear to be incorporated into endocytotic pits, vesicles and eventually the forming yolk body. -
Polydora (Polychaeta: Spionidae) Species from Taiwan Vasily I
Zoological Studies 39(3): 203-217 (2000) Polydora (Polychaeta: Spionidae) Species from Taiwan Vasily I. Radashevsky1,2 and Hwey-Lian Hsieh2,* 1Institute of Marine Biology, Russian Academy of Sciences, Vladivostok 690041, Russia 2Institute of Zoology, Academia Sinica, Taipei, Taiwan 115, R.O.C. (Accepted March 7, 2000) Vasily I. Radashevsky and Hwey-Lian Hsieh (2000) Polydora (Polychaeta: Spionidae) species from Taiwan. Zoological Studies 39(3): 203-217. This report discusses 5 species of the genus Polydora (Polychaeta: Spionidae) from the shallow waters of Taiwan and off mainland China. These include P. cf. agassizi Claparède, 1869, P. cornuta Bosc, 1802, and 3 new species: P. fusca, P. triglanda, and P. villosa. Polydora cf. agassizi inhabits mud tubes on the surface of a horseshoe crab; P. cornuta and P. fusca inhabit mud tubes on soft bottoms while P. villosa bores into skeletons of living corals. Polydora triglanda is both a shell-borer and a tube- dweller, and no morphological differences were found between individuals from the 2 habitats. Five species are described and illustrated, and a key is provided for their identification. Polydora species with black bands on the palps, median antenna on the caruncle, and needlelike spines on the posterior notopodia are reviewed, and their morphological characteristics are compared. Key words: Spionid polychaete, Polydora, Systematics, Morphology. Spionid polychaetes from Taiwan have not yet been the subject of systematic study and to date only parentheses after the museum abbreviation and re- 1 species, Pseudopolydora diopatra Hsieh, is de- gistration number. scribed from the region (Hsieh 1992). In recent stud- ies on macrobenthic communities, a large number of SYSTEMATIC ACCOUNT spionids was collected along the western coast of Taiwan and from Kinmen Island, located just off Key to identification of Polydora species from Taiwan mainland China (Fig. -
The Genome of the Poecilogonous Annelid Streblospio Benedicti Christina Zakas1, Nathan D
bioRxiv preprint doi: https://doi.org/10.1101/2021.04.15.440069; this version posted April 16, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. The genome of the poecilogonous annelid Streblospio benedicti Christina Zakas1, Nathan D. Harry1, Elizabeth H. Scholl2 and Matthew V. Rockman3 1Department of Genetics, North Carolina State University, Raleigh, NC, USA 2Bioinformatics Research Center, North Carolina State University, Raleigh, NC, USA 3Department of Biology and Center for Genomics & Systems Biology, New York University, New York, NY, USA [email protected] [email protected] Abstract Streblospio benedicti is a common marine annelid that has become an important model for developmental evolution. It is the only known example of poecilogony, where two distinct developmental modes occur within a single species, that is due to a heritable difference in egg size. The dimorphic developmental programs and life-histories exhibited in this species depend on differences within the genome, making it an optimal model for understanding the genomic basis of developmental divergence. Studies using S. benedicti have begun to uncover the genetic and genomic principles that underlie developmental uncoupling, but until now they have been limited by the lack of availability of genomic tools. Here we present an annotated chromosomal-level genome assembly of S. benedicti generated from a combination of Illumina reads, Nanopore long reads, Chicago and Hi-C chromatin interaction sequencing, and a genetic map from experimental crosses. At 701.4 Mb, the S. benedicti genome is the largest annelid genome to date that has been assembled to chromosomal scaffolds, yet it does not show evidence of extensive gene family expansion, but rather longer intergenic regions. -
Polychaete Worms Definitions and Keys to the Orders, Families and Genera
THE POLYCHAETE WORMS DEFINITIONS AND KEYS TO THE ORDERS, FAMILIES AND GENERA THE POLYCHAETE WORMS Definitions and Keys to the Orders, Families and Genera By Kristian Fauchald NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY In Conjunction With THE ALLAN HANCOCK FOUNDATION UNIVERSITY OF SOUTHERN CALIFORNIA Science Series 28 February 3, 1977 TABLE OF CONTENTS PREFACE vii ACKNOWLEDGMENTS ix INTRODUCTION 1 CHARACTERS USED TO DEFINE HIGHER TAXA 2 CLASSIFICATION OF POLYCHAETES 7 ORDERS OF POLYCHAETES 9 KEY TO FAMILIES 9 ORDER ORBINIIDA 14 ORDER CTENODRILIDA 19 ORDER PSAMMODRILIDA 20 ORDER COSSURIDA 21 ORDER SPIONIDA 21 ORDER CAPITELLIDA 31 ORDER OPHELIIDA 41 ORDER PHYLLODOCIDA 45 ORDER AMPHINOMIDA 100 ORDER SPINTHERIDA 103 ORDER EUNICIDA 104 ORDER STERNASPIDA 114 ORDER OWENIIDA 114 ORDER FLABELLIGERIDA 115 ORDER FAUVELIOPSIDA 117 ORDER TEREBELLIDA 118 ORDER SABELLIDA 135 FIVE "ARCHIANNELIDAN" FAMILIES 152 GLOSSARY 156 LITERATURE CITED 161 INDEX 180 Preface THE STUDY of polychaetes used to be a leisurely I apologize to my fellow polychaete workers for occupation, practised calmly and slowly, and introducing a complex superstructure in a group which the presence of these worms hardly ever pene- so far has been remarkably innocent of such frills. A trated the consciousness of any but the small group great number of very sound partial schemes have been of invertebrate zoologists and phylogenetlcists inter- suggested from time to time. These have been only ested in annulated creatures. This is hardly the case partially considered. The discussion is complex enough any longer. without the inclusion of speculations as to how each Studies of marine benthos have demonstrated that author would have completed his or her scheme, pro- these animals may be wholly dominant both in num- vided that he or she had had the evidence and inclina- bers of species and in numbers of specimens. -
SPECIAL PUBLICATION 6 the Effects of Marine Debris Caused by the Great Japan Tsunami of 2011
PICES SPECIAL PUBLICATION 6 The Effects of Marine Debris Caused by the Great Japan Tsunami of 2011 Editors: Cathryn Clarke Murray, Thomas W. Therriault, Hideaki Maki, and Nancy Wallace Authors: Stephen Ambagis, Rebecca Barnard, Alexander Bychkov, Deborah A. Carlton, James T. Carlton, Miguel Castrence, Andrew Chang, John W. Chapman, Anne Chung, Kristine Davidson, Ruth DiMaria, Jonathan B. Geller, Reva Gillman, Jan Hafner, Gayle I. Hansen, Takeaki Hanyuda, Stacey Havard, Hirofumi Hinata, Vanessa Hodes, Atsuhiko Isobe, Shin’ichiro Kako, Masafumi Kamachi, Tomoya Kataoka, Hisatsugu Kato, Hiroshi Kawai, Erica Keppel, Kristen Larson, Lauran Liggan, Sandra Lindstrom, Sherry Lippiatt, Katrina Lohan, Amy MacFadyen, Hideaki Maki, Michelle Marraffini, Nikolai Maximenko, Megan I. McCuller, Amber Meadows, Jessica A. Miller, Kirsten Moy, Cathryn Clarke Murray, Brian Neilson, Jocelyn C. Nelson, Katherine Newcomer, Michio Otani, Gregory M. Ruiz, Danielle Scriven, Brian P. Steves, Thomas W. Therriault, Brianna Tracy, Nancy C. Treneman, Nancy Wallace, and Taichi Yonezawa. Technical Editor: Rosalie Rutka Please cite this publication as: The views expressed in this volume are those of the participating scientists. Contributions were edited for Clarke Murray, C., Therriault, T.W., Maki, H., and Wallace, N. brevity, relevance, language, and style and any errors that [Eds.] 2019. The Effects of Marine Debris Caused by the were introduced were done so inadvertently. Great Japan Tsunami of 2011, PICES Special Publication 6, 278 pp. Published by: Project Designer: North Pacific Marine Science Organization (PICES) Lori Waters, Waters Biomedical Communications c/o Institute of Ocean Sciences Victoria, BC, Canada P.O. Box 6000, Sidney, BC, Canada V8L 4B2 Feedback: www.pices.int Comments on this volume are welcome and can be sent This publication is based on a report submitted to the via email to: [email protected] Ministry of the Environment, Government of Japan, in June 2017. -
An Annotated Checklist of the Marine Macroinvertebrates of Alaska David T
NOAA Professional Paper NMFS 19 An annotated checklist of the marine macroinvertebrates of Alaska David T. Drumm • Katherine P. Maslenikov Robert Van Syoc • James W. Orr • Robert R. Lauth Duane E. Stevenson • Theodore W. Pietsch November 2016 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Kathryn D. Sullivan Scientific Editor* Administrator Richard Langton National Marine National Marine Fisheries Service Fisheries Service Northeast Fisheries Science Center Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Office of Science and Technology Economics and Social Analysis Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is pub- lished by the Scientific Publications Of- *Bruce Mundy (PIFSC) was Scientific Editor during the fice, National Marine Fisheries Service, scientific editing and preparation of this report. NOAA, 7600 Sand Point Way NE, Seattle, WA 98115. The Secretary of Commerce has The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original determined that the publication of research reports, taxonomic keys, species synopses, flora and fauna studies, and data- this series is necessary in the transac- intensive reports on investigations in fishery science, engineering, and economics. tion of the public business required by law of this Department.