A Checklist of Spionidae of South Africa
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New Insights in the Biogeographical Distributions of Two Spionidae (Annelida) from the NE Atlantic and Mediterranean French Coasts
Zoosymposia 19: 173–184 (2020) ISSN 1178-9905 (print edition) https://www.mapress.com/j/zs ZOOSYMPOSIA Copyright © 2020 · Magnolia Press ISSN 1178-9913 (online edition) https://doi.org/10.11646/zoosymposia.19.1.18 http://zoobank.org/urn:lsid:zoobank.org:pub:7CF4D06E-47F9-48C5-9703-5CECFD9C1491 New insights in the biogeographical distributions of two Spionidae (Annelida) from the NE Atlantic and Mediterranean French coasts JÉRÔME JOURDE1,5*, NICOLAS LAVESQUE2,7, CÉLINE LABRUNE3,10, JEAN-MICHEL AMOUR- OUX3,12, PAULO BONIFÁCIO3,11, SUZIE HUMBERT2,8, BASTIEN LAMARQUE2,9, PIERRE-GUY SAURIAU1,6 & KARIN MEIßNER4,13 1La Rochelle Université, CNRS, UMR 7266 LIENSs, 2 rue Olympe de Gouges 17000 La Rochelle, France 2Université de Bordeaux, CNRS, UMR 5805 EPOC, Station Marine d’Arcachon, 2 rue du Professeur Jolyet, 33120 Arcachon, France 3Sorbonne Université, CNRS, UMR LECOB 8222, Laboratoire d’Ecogéochimie des Environnements Benthiques, Observatoire Océanologique de Banyuls, Avenue Pierre Fabre, 66650 Banyuls-sur-Mer, France 4Senckenberg Forschungsinstitute und Naturmuseen (SFN), Deutsches Zentrum für Marine Biodiversitätsforschung, Biozentrum Grindel, Martin-Luther-King-Platz 3, D-20146 Hamburg, Germany 5 [email protected], https://orcid.org/0000-0001-7260-8419 6 [email protected], https://orcid.org/0000-0002-5360-8728 7 [email protected], https://orcid.org/0000-0001-5701-2393 8 [email protected], https://orcid.org/0000-0003-4254-3567 9 [email protected], https://orcid.org/0000-0002-1418-9049 10 [email protected], -
A Comprehensive Wetland Program for Fringing Salt Marshes in the Ory K River, Maine Pamela A
University of New England DUNE: DigitalUNE Environmental Studies Faculty Publications Environmental Studies Department 5-31-2007 A Comprehensive Wetland Program For Fringing Salt Marshes In The orY k River, Maine Pamela A. Morgan University of New England, [email protected] Jeremy Miller Wells National Estuarine Research Reserve Christopher Cayce Dalton Wells National Estuarine Research Reserve Michele Dionne Wells National Estuarine Research Reserve Follow this and additional works at: http://dune.une.edu/env_facpubs Part of the Environmental Health and Protection Commons, Environmental Indicators and Impact Assessment Commons, Environmental Monitoring Commons, Marine Biology Commons, Plant Sciences Commons, and the Systems Biology Commons Recommended Citation Morgan, Pamela A.; Miller, Jeremy; Dalton, Christopher Cayce; and Dionne, Michele, "A Comprehensive Wetland Program For Fringing Salt Marshes In The orkY River, Maine" (2007). Environmental Studies Faculty Publications. Paper 3. http://dune.une.edu/env_facpubs/3 This Article is brought to you for free and open access by the Environmental Studies Department at DUNE: DigitalUNE. It has been accepted for inclusion in Environmental Studies Faculty Publications by an authorized administrator of DUNE: DigitalUNE. For more information, please contact [email protected]. A Comprehensive Wetland Program for Fringing Salt Marshes in the York River, Maine A Final Report Submitted to the Environmental Protection Agency by: Dr. Pamela Morgan1 Jeremy Miller2 Christopher Cayce Dalton2,3 Dr. Michele Dionne2 1 University of New England Department of Environmental Studies 11 Hills Beach Road, Biddeford ME 04009 2 Wells National Estuarine Research Reserve 342 Laudholm Farm Road, Wells ME 04090 3 Town of York 186 York Street, York ME 03909 May 31, 2007 Contents Executive Summary ........................................................................................................5 Introduction ................................................................................................................. -
Catálogo Das Espécies De Annelida Polychaeta Do Brasil
CATÁLOGO DAS ESPÉCIES DE ANNELIDA POLYCHAETA DO BRASIL A. Cecília Z. Amaral Silvana A. Henriques Nallin Tatiana Menchini Steiner Depto. Zoologia, Inst. Biologia, UNICAMP, CP 6109, 13083-970, Campinas, SP, Brasil. E-mail: [email protected]; [email protected] Esta compilação das espécies de poliquetas do Brasil é dedicada a todos aqueles que em algum momento tiveram o privilégio de admirar a beleza e avaliar a importância que este grupo representa para a ciência. A.C.Z.A. Este trabalho deve ser citado como: AMARAL, A.C.Z., NALLIN, S.A.H. & STEINER, T.M. 2006. Catálogo das espécies de Annelida Polychaeta do Brasil. http://www.ib.unicamp.br/destaques\biota\bentos_marinho\prod_cien\texto_poli.pdf (consultado em ... ). Campinas 2006 INTRODUÇÃO Os primeiros registros de poliquetas do Brasil foram publicados por Müller (1858), que descreveu treze novas espécies marinhas da Ilha de Santa Catarina, e por Kinberg (1865, 1910) com algumas espécies coletadas pela expedição “Eugenies” ao largo da costa brasileira. A edição de 1910 é excelente e apresenta pranchas de primoroso trabalho gráfico. Hartman (1948) publicou uma revisão destas espécies descritas por Kinberg entre os anos de 1865 e 1910, tornando-se um importante trabalho taxonômico, que contém minuciosa e bem documentada descrição e discussão de muitas dessas espécies. Hansen (1882), a partir de material proveniente, principalmente, da região do Rio de Janeiro, descreveu 42 espécies de poliquetas colecionadas por Edouard Joseph L.M. van Beneden durante uma viagem ao Brasil e à Argentina. Os trabalhos de Friedrich (1950) e Tebble (1960), com material procedente do Atlântico Sul, devem ser os mais conhecidos. -
Mitochondrial Genomes of Two Polydora
www.nature.com/scientificreports OPEN Mitochondrial genomes of two Polydora (Spionidae) species provide further evidence that mitochondrial architecture in the Sedentaria (Annelida) is not conserved Lingtong Ye1*, Tuo Yao1, Jie Lu1, Jingzhe Jiang1 & Changming Bai2 Contrary to the early evidence, which indicated that the mitochondrial architecture in one of the two major annelida clades, Sedentaria, is relatively conserved, a handful of relatively recent studies found evidence that some species exhibit elevated rates of mitochondrial architecture evolution. We sequenced complete mitogenomes belonging to two congeneric shell-boring Spionidae species that cause considerable economic losses in the commercial marine mollusk aquaculture: Polydora brevipalpa and Polydora websteri. The two mitogenomes exhibited very similar architecture. In comparison to other sedentarians, they exhibited some standard features, including all genes encoded on the same strand, uncommon but not unique duplicated trnM gene, as well as a number of unique features. Their comparatively large size (17,673 bp) can be attributed to four non-coding regions larger than 500 bp. We identifed an unusually large (putative) overlap of 14 bases between nad2 and cox1 genes in both species. Importantly, the two species exhibited completely rearranged gene orders in comparison to all other available mitogenomes. Along with Serpulidae and Sabellidae, Polydora is the third identifed sedentarian lineage that exhibits disproportionally elevated rates of mitogenomic architecture rearrangements. Selection analyses indicate that these three lineages also exhibited relaxed purifying selection pressures. Abbreviations NCR Non-coding region PCG Protein-coding gene Metazoan mitochondrial genomes (mitogenomes) usually encode the set of 37 genes, comprising 2 rRNAs, 22 tRNAs, and 13 proteins, encoded on both genomic strands. -
FAU Institutional Repository
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©1984 Elsevier B.V. This manuscript is an author version with the final publication available at http://www.sciencedirect.com/science/journal/00220981 and may be cited as: Wilson, W. H., Jr. (1984). Non‐overlapping distributions of spionid polychaetes: the relative importance of habitat and competition. Journal of Experimental Marine Biology and Ecology, 75(2), 119‐127. doi:10.1016/0022‐0981(84)90176‐X J. Exp. Mar. Bioi. Ecol., 1984, Vol. 75, pp. 119-127 119 Elsevier JEM 217 NON-OVERLAPPING DISTRIBUTIONS OF SPIONID POLYCHAETES: THE RELATIVE IMPORTANCE OF HABITAT AND COMPETITIONI W. HERBERT WILSON, JR. Harbor Branch Institution, Inc .. R.R. 1, Box 196, Fort Pierce, FL 33450. U.S.A. Abstract: The spionid polychaetes, Pygospio elegans Claparede, Pseudopolydora kempi (Southern), and Rhynchospio arenincola Hartman are found in False Bay, Washington. Two species, Pygospio elegans and Pseudopolydora kempi, co-occur in the high intertidal zone. The third species Rhynchospio arenincola occurs only in low intertidal areas. Reciprocal transplant experiments were used to test the importance of intraspecific density, interspecific density, and habitat on the survivorship of experimental animals. For all three species, only habitat had a significant effect. Individuals of each species survived better in experimental containers in their native habitat, regardless of the heterospecific and conspecific densities used in the experiments. The physical stresses associated with the prolonged exposure of the high intertidal site are experimentally shown to result in Rhynchospio mortality. From these experiments, habitat type is the only significant factor tested which can explain the observed distributions; the presence of confamilials has no detected effect on the survivorship of any species, suggesting that competition does not serve to maintain the patterns of distribution. -
Baltic Sea Genetic Biodiversity: Current Knowledge Relating to Conservation Management
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Brage IMR Received: 21 August 2016 Revised: 26 January 2017 Accepted: 16 February 2017 DOI: 10.1002/aqc.2771 REVIEW ARTICLE Baltic Sea genetic biodiversity: Current knowledge relating to conservation management Lovisa Wennerström1* | Eeva Jansson1,2* | Linda Laikre1 1 Department of Zoology, Stockholm University, SE‐106 91 Stockholm, Sweden Abstract 2 Institute of Marine Research, Bergen, 1. The Baltic Sea has a rare type of brackish water environment which harbours unique genetic Norway lineages of many species. The area is highly influenced by anthropogenic activities and is affected Correspondence by eutrophication, climate change, habitat modifications, fishing and stocking. Effective genetic Lovisa Wennerström, Department of Zoology, management of species in the Baltic Sea is highly warranted in order to maximize their potential SE‐106 91 Stockholm, Sweden. for survival, but shortcomings in this respect have been documented. Lack of knowledge is one Email: [email protected] reason managers give for why they do not regard genetic diversity in management. Funding information Swedish Research Council Formas (LL); The 2. Here, the current knowledge of population genetic patterns of species in the Baltic Sea is BONUS BAMBI Project supported by BONUS reviewed and summarized with special focus on how the information can be used in (Art 185), funded jointly by the European management. The extent to which marine protected areas (MPAs) protect genetic diversity Union and the Swedish Research Council Formas (LL); Swedish Cultural Foundation in is also investigated in a case study of four key species. -
(Polychaeta) of the Gulf
STUDIES ON THE FAUNA OF CURAÇAO AND OTHER CARIBBEAN ISLANDS: No. 129. Spionidae (Polychaeta) of the Gulf of Mexico and the Caribbean Sea by Nancy Marie Foster (Dunbarton College, Washington, D.C.) page figures INTRODUCTION History 3 Acknowledgements 5 Genera] Taxonomic Characters of the Spionidae (PI. 1-2) . 5 Development 11 Ecology and Distribution 12 Methods and Materials 14 Family Diagnosis 14 Key to Spionid Genera of the Gulf of Mexico and Caribbean Sea 15 TAXONOMIC SECTION Polydora 18 1—12 — commensalis Andrews 20 1-12 — ligni Webster 22 13-21 — plena Berkeley & Berkeley 24 22-29 — websteri Hartman 26 30-36 Pygospio 28 — elegans Claparfede 29 37-47 Spio 32 — 35 pettiboneae sp. n 48-56 Scolecolepides 37 — viridis (Verrill) 37 57-65 Spiophanes 40 — bombyx (Claparede) 40 66-75 — wigleyi Pettibone 43 76-85 Malacoceros 47 — vanderhorsti (Augener) 48 86-92 — indicus (Fauvel) 50 93-99 — glutaeus (Ehlers) 53 100-111 — in 57 112-117 flatus sp. n 2 Scolelepis j 58 — squamata (Miilleri 59 118-131 — texana sp. n 63 132-142 Aonides 65 — mayaguezensis Foster 66 143-154 Laonice 69 — cirrata (Sars, 69 155-160 Dispio 72 — uncinata Hartman 73 161-174 Prionospio 79 — steenstrupi Malmgren 84 175-185 — cristata sp. n 87 186-199 — heterobranchia Moore 89 199-212 Apoprionospio 93 — pygmaea (Hartman; 94 213-225 — dayi Foster 97 226-236 Paraprionospio 100 — pinnata (Ehlers) 102 237-261 Aquilaspio 105 Minuspio 106 — cirri fera (Wir6n) 108 262-275 Streblospio 112 — benedicti Webster 112 276-283 ZOOGEOGRAPHY 116 284-285 DISCUSSION OF TAXONOMIC CHARACTERS 118 LITERATURE CITED 121 INTRODUCTION HISTORY Although there have been several collections of polychaetous annelids from the Gulf of Mexico and Caribbean few Sea, very spionids have been included in the published species lists. -
Pygospio Elegans
Protistology 10 (4), 148–157 (2016) Protistology Metchnikovella dogieli sp. n. (Microsporidia: Metch- nikovellida), a parasite of archigregarines Selenidium sp. from polychaetes Pygospio elegans Gita G. Paskerova1, Ekaterina V. Frolova1, Magdaléna Kováčiková2, Tatiana S. Panfilkina1, Yelisei S. Mesentsev1, Alexey V. Smirnov1 and Elena S. Nassonova1,3 1 Department of Invertebrate Zoology, St Petersburg State University, Universitetskaya nab. 7/9, 199034 St Petersburg, Russian Federation 2 Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 61137 Brno, Czech Republic 3 Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Ave. 4, 194064 St Petersburg, Russian Federation | Submitted November 21, 2016 | Accepted December 10, 2016 | Summary Cysts and free spores of a metchnikovellid microsporidium were found in several specimens of an archigregarine Selenidium sp. isolated from polychaetes Pygospio elegans. Samples were collected at the littoral area of the Kandalaksha Bay of the White Sea in the year 2016. We examined this material with high-quality light optics in stained and live preparations. The structure of cysts and the host range suggest that this species belongs to the genus Metchnikovella Caullery et Mesnil, 1897. The length of the cysts varied from 9.5 to 34 µm (av. 23.8 µm); the width of the cysts was 4.8–9.2 µm (av. 8.2 µm). The number of cyst-bound spores varied from 7 to 18. Cyst-bound spores were oval or ovoid and arranged in two or three rows. The length of the spores was 2.2–3.0 µm (av. 2.6 µm); the width was 1.4–2.9 µm (av. -
(Scolelepis) Daphoinos (Annelida: Polychaeta: Spionidae) in South Korea
Anim. Syst. Evol. Divers. Vol. 37, No. 3: 229-234, July 2021 https://doi.org/10.5635/ASED.2021.37.3.007 Short communication First Record of Scolelepis (Scolelepis) daphoinos (Annelida: Polychaeta: Spionidae) in South Korea Geon Hyeok Lee, Gi-Sik Min* Department of Biological Sciences, Inha University, Incheon 22212, Korea ABSTRACT Scolelepis (Scolelepis) daphoinos is newly reported in Korean fauna. This species can be distinguished from its congeners by the following characteristics: the presence of reddish pigment patches on the posterior part of the prostomium, notopodial postchaetal lamellae that are partially fused to the branchiae, and the presence of only the bidentate hooded hooks. The morphological diagnosis and photographs of S. (S.) daphoinos are provided. The partial mitochondrial cytochrome c oxidase subunit I (COI), 16S ribosomal DNA (16S rDNA), and the nuclear 18S ribosomal DNA (18S rDNA) sequences from Korean specimens of S. (S.) daphoinos were determined. Species identification was supported by a comparison of DNA barcode sequences of COI and 16S rDNA with morphological examination from the specimens of type locality, China. Keywords: Scolelepis (Scolelepis) daphoinos, COI, 16S rDNA, 18S rDNA, Korea INTRODUCTION Yoon, 2016; Lee et al., 2018). The sequences of mitochondrial cytochrome c oxidase sub- The genus Scolelepis Blainville, 1828 is one of the largest unit I (COI), 16S ribosomal DNA (16S rDNA), and the nucle- groups of spionid polychaetes commonly found on soft bot- ar 18S ribosomal DNA (18S rDNA) have been used as DNA toms in intertidal to deep-sea waters (Sikorski and Pavlova, barcode markers for the molecular identification of spionid 2015). Members of this genus are taxonomically defined by polychaetes (Radashevsky and Pankova, 2013; Sato-Okoshi a distally pointed prostomium, the presence of branchiae and Abe, 2013). -
Polydora (Polychaeta: Spionidae) Species from Taiwan Vasily I
Zoological Studies 39(3): 203-217 (2000) Polydora (Polychaeta: Spionidae) Species from Taiwan Vasily I. Radashevsky1,2 and Hwey-Lian Hsieh2,* 1Institute of Marine Biology, Russian Academy of Sciences, Vladivostok 690041, Russia 2Institute of Zoology, Academia Sinica, Taipei, Taiwan 115, R.O.C. (Accepted March 7, 2000) Vasily I. Radashevsky and Hwey-Lian Hsieh (2000) Polydora (Polychaeta: Spionidae) species from Taiwan. Zoological Studies 39(3): 203-217. This report discusses 5 species of the genus Polydora (Polychaeta: Spionidae) from the shallow waters of Taiwan and off mainland China. These include P. cf. agassizi Claparède, 1869, P. cornuta Bosc, 1802, and 3 new species: P. fusca, P. triglanda, and P. villosa. Polydora cf. agassizi inhabits mud tubes on the surface of a horseshoe crab; P. cornuta and P. fusca inhabit mud tubes on soft bottoms while P. villosa bores into skeletons of living corals. Polydora triglanda is both a shell-borer and a tube- dweller, and no morphological differences were found between individuals from the 2 habitats. Five species are described and illustrated, and a key is provided for their identification. Polydora species with black bands on the palps, median antenna on the caruncle, and needlelike spines on the posterior notopodia are reviewed, and their morphological characteristics are compared. Key words: Spionid polychaete, Polydora, Systematics, Morphology. Spionid polychaetes from Taiwan have not yet been the subject of systematic study and to date only parentheses after the museum abbreviation and re- 1 species, Pseudopolydora diopatra Hsieh, is de- gistration number. scribed from the region (Hsieh 1992). In recent stud- ies on macrobenthic communities, a large number of SYSTEMATIC ACCOUNT spionids was collected along the western coast of Taiwan and from Kinmen Island, located just off Key to identification of Polydora species from Taiwan mainland China (Fig. -
1 Metagenetic Analysis of 2018 and 2019 Plankton Samples from Prince
Metagenetic Analysis of 2018 and 2019 Plankton Samples from Prince William Sound, Alaska. Report to Prince William Sound Regional Citizens’ Advisory Council (PWSRCAC) From Molecular Ecology Laboratory Moss Landing Marine Laboratory Dr. Jonathan Geller Melinda Wheelock Martin Guo Any opinions expressed in this PWSRCAC-commissioned report are not necessarily those of PWSRCAC. April 13, 2020 ABSTRACT This report describes the methods and findings of the metagenetic analysis of plankton samples from the waters of Prince William Sound (PWS), Alaska, taken in May of 2018 and 2019. The study was done to identify zooplankton, in particular the larvae of benthic non-indigenous species (NIS). Plankton samples, collected by the Prince William Sound Science Center (PWSSC), were analyzed by the Molecular Ecology Laboratory at the Moss Landing Marine Laboratories. The samples were taken from five stations in Port Valdez and nearby in PWS. DNA was extracted from bulk plankton and a portion of the mitochondrial Cytochrome c oxidase subunit 1 gene (the most commonly used DNA barcode for animals) was amplified by polymerase chain reaction (PCR). Products of PCR were sequenced using Illumina reagents and MiSeq instrument. In 2018, 257 operational taxonomic units (OTU; an approximation of biological species) were found and 60 were identified to species. In 2019, 523 OTU were found and 126 were identified to species. Most OTU had no reference sequence and therefore could not be identified. Most identified species were crustaceans and mollusks, and none were non-native. Certain species typical of fouling communities, such as Porifera (sponges) and Bryozoa (moss animals) were scarce. Larvae of many species in these phyla are poorly dispersing, such that they will be found in abundance only in close proximity to adult populations. -
Polychaete Worms Definitions and Keys to the Orders, Families and Genera
THE POLYCHAETE WORMS DEFINITIONS AND KEYS TO THE ORDERS, FAMILIES AND GENERA THE POLYCHAETE WORMS Definitions and Keys to the Orders, Families and Genera By Kristian Fauchald NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY In Conjunction With THE ALLAN HANCOCK FOUNDATION UNIVERSITY OF SOUTHERN CALIFORNIA Science Series 28 February 3, 1977 TABLE OF CONTENTS PREFACE vii ACKNOWLEDGMENTS ix INTRODUCTION 1 CHARACTERS USED TO DEFINE HIGHER TAXA 2 CLASSIFICATION OF POLYCHAETES 7 ORDERS OF POLYCHAETES 9 KEY TO FAMILIES 9 ORDER ORBINIIDA 14 ORDER CTENODRILIDA 19 ORDER PSAMMODRILIDA 20 ORDER COSSURIDA 21 ORDER SPIONIDA 21 ORDER CAPITELLIDA 31 ORDER OPHELIIDA 41 ORDER PHYLLODOCIDA 45 ORDER AMPHINOMIDA 100 ORDER SPINTHERIDA 103 ORDER EUNICIDA 104 ORDER STERNASPIDA 114 ORDER OWENIIDA 114 ORDER FLABELLIGERIDA 115 ORDER FAUVELIOPSIDA 117 ORDER TEREBELLIDA 118 ORDER SABELLIDA 135 FIVE "ARCHIANNELIDAN" FAMILIES 152 GLOSSARY 156 LITERATURE CITED 161 INDEX 180 Preface THE STUDY of polychaetes used to be a leisurely I apologize to my fellow polychaete workers for occupation, practised calmly and slowly, and introducing a complex superstructure in a group which the presence of these worms hardly ever pene- so far has been remarkably innocent of such frills. A trated the consciousness of any but the small group great number of very sound partial schemes have been of invertebrate zoologists and phylogenetlcists inter- suggested from time to time. These have been only ested in annulated creatures. This is hardly the case partially considered. The discussion is complex enough any longer. without the inclusion of speculations as to how each Studies of marine benthos have demonstrated that author would have completed his or her scheme, pro- these animals may be wholly dominant both in num- vided that he or she had had the evidence and inclina- bers of species and in numbers of specimens.