Supplementary Text Pyrophilous Fungal Taxa Identified in Burned
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Chorioactidaceae: a New Family in the Pezizales (Ascomycota) with Four Genera
mycological research 112 (2008) 513–527 journal homepage: www.elsevier.com/locate/mycres Chorioactidaceae: a new family in the Pezizales (Ascomycota) with four genera Donald H. PFISTER*, Caroline SLATER, Karen HANSENy Harvard University Herbaria – Farlow Herbarium of Cryptogamic Botany, Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Avenue, Cambridge, MA 02138, USA article info abstract Article history: Molecular phylogenetic and comparative morphological studies provide evidence for the Received 15 June 2007 recognition of a new family, Chorioactidaceae, in the Pezizales. Four genera are placed in Received in revised form the family: Chorioactis, Desmazierella, Neournula, and Wolfina. Based on parsimony, like- 1 November 2007 lihood, and Bayesian analyses of LSU, SSU, and RPB2 sequence data, Chorioactidaceae repre- Accepted 29 November 2007 sents a sister clade to the Sarcosomataceae, to which some of these taxa were previously Corresponding Editor: referred. Morphologically these genera are similar in pigmentation, excipular construction, H. Thorsten Lumbsch and asci, which mostly have terminal opercula and rounded, sometimes forked, bases without croziers. Ascospores have cyanophilic walls or cyanophilic surface ornamentation Keywords: in the form of ridges or warts. So far as is known the ascospores and the cells of the LSU paraphyses of all species are multinucleate. The six species recognized in these four genera RPB2 all have limited geographical distributions in the northern hemisphere. Sarcoscyphaceae ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Sarcosomataceae SSU Introduction indicated a relationship of these taxa to the Sarcosomataceae and discussed the group as the Chorioactis clade. Only six spe- The Pezizales, operculate cup-fungi, have been put on rela- cies are assigned to these genera, most of which are infre- tively stable phylogenetic footing as summarized by Hansen quently collected. -
Biological Diversity
From the Editors’ Desk….. Biodiversity, which is defined as the variety and variability among living organisms and the ecological complexes in which they occur, is measured at three levels – the gene, the species, and the ecosystem. Forest is a key element of our terrestrial ecological systems. They comprise tree- dominated vegetative associations with an innate complexity, inherent diversity, and serve as a renewable resource base as well as habitat for a myriad of life forms. Forests render numerous goods and services, and maintain life-support systems so essential for life on earth. India in its geographical area includes 1.8% of forest area according to the Forest Survey of India (2000). The forests cover an actual area of 63.73 million ha (19.39%) and consist of 37.74 million ha of dense forests, 25.51 million ha of open forest and 0.487 million ha of mangroves, apart from 5.19 million ha of scrub and comprises 16 major forest groups (MoEF, 2002). India has a rich and varied heritage of biodiversity covering ten biogeographical zones, the trans-Himalayan, the Himalayan, the Indian desert, the semi-arid zone(s), the Western Ghats, the Deccan Peninsula, the Gangetic Plain, North-East India, and the islands and coasts (Rodgers; Panwar and Mathur, 2000). India is rich at all levels of biodiversity and is one of the 12 megadiversity countries in the world. India’s wide range of climatic and topographical features has resulted in a high level of ecosystem diversity encompassing forests, wetlands, grasslands, deserts, coastal and marine ecosystems, each with a unique assemblage of species (MoEF, 2002). -
MYCOTAXON Volume 89(2), Pp
MYCOTAXON Volume 89(2), pp. 277-281 April-June 2004 A note on some morphological features of Chorioactis geaster (Pezizales, Ascomycota) DONALD H. PFISTER dpfi[email protected] Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Ave., Cambridge, MA 02138, USA Shuichi Kur ogi Miyazaki Museum, 2-4-4 Jingu, Miyazaki City 7880-0053, Japan Abstract–A study of Chorioactis geaster (Sarcosomataceae) has shown the presence of several unreported or unconfirmed characters for this unusual and rare operculate discomycete. The ascospores are ornamented, they mature more or less simultaneously in all asci of a single ascoma, and asci have a thin hyphal base. The species is compared with species of the genera Cookeina and Microstoma (Sarcoscyphaceae) that also have this character. SEM shows open asci have a two-layered opercular region confirming TEM reports of differentiated wall layering in this region of the ascus. These features are discussed and the isolated systematic position of Chorioactis suggested by previous studies is confirmed. Key words–Ascus morphology, ascospore maturation, spore ornamentation Introduction Recently we showed that Chorioactis geaster (Peck) Kupfer ex Eckblad populations in Japan and North America represent distinct but closely related lineages. Molecular clock estimates suggest that they have probably been separate for at least 19 million years (Peterson et al. 2004). In the course of that study we examined a number of collections and determined that morphologically we could not distinguish the North American and Japanese collections. Our detailed studies, however, uncovered morphological features of the species that had not been noted previously. These observations are reported here. -
(With (Otidiaceae). Annellospores, The
PERSOONIA Published by the Rijksherbarium, Leiden Volume Part 6, 4, pp. 405-414 (1972) Imperfect states and the taxonomy of the Pezizales J.W. Paden Department of Biology, University of Victoria Victoria, B. C., Canada (With Plates 20-22) Certainly only a relatively few species of the Pezizales have been studied in culture. I that this will efforts in this direction. hope paper stimulatemore A few patterns are emerging from those species that have been cultured and have produced conidia but more information is needed. Botryoblasto- and found in cultures of spores ( Oedocephalum Ostracoderma) are frequently Peziza and Iodophanus (Pezizaceae). Aleurospores are known in Peziza but also in other like known in genera. Botrytis- imperfect states are Trichophaea (Otidiaceae). Sympodulosporous imperfect states are known in several families (Sarcoscyphaceae, Sarcosomataceae, Aleuriaceae, Morchellaceae) embracing both suborders. Conoplea is definitely tied in with Urnula and Plectania, Nodulosporium with Geopyxis, and Costantinella with Morchella. Certain types of conidia are not presently known in the Pezizales. Phialo- and few other have spores, porospores, annellospores, blastospores a types not been reported. The absence of phialospores is of special interest since these are common in the Helotiales. The absence of conidia in certain e. Helvellaceae and Theleboleaceae also be of groups, g. may significance, and would aid in delimiting these taxa. At the species level critical com- of taxonomic and parison imperfect states may help clarify problems supplement other data in distinguishing between closely related species. Plectania and of where such Peziza, perhaps Sarcoscypha are examples genera studies valuable. might prove One of the Pezizales in need of in culture large group desparate study are the few of these have been cultured. -
Forest Ecology and Management Do Fungi Have a Role As Soil Stabilizers
Forest Ecology and Management 257 (2009) 1063-1069 Contents lists available at ScienceDirect Forest Ecology and Management ELSEVIER journal homepage: www.elsevier.com/locate/foreco Full length article Do fungi have a role as soil stabilizers and remediators after forest fire? Andrew W. Claridge a,b,*, James M. Trappe c,d, Karen Hansen e a Department of Environment and Climate Change, Parks and Wildlife Group, Planning and Performance Unit, Southern Branch, P.O. Box 733, Queanbeyan, New South Wales 2620, Australia b School of Physical, Environmental and Mathematical Sciences, University of New South Wales, Australian Defence Force Academy, Northcott Drive, Canberra, Australian Capital Territory 2600, Australia C Department of Forest Science, Oregon State University, Corvallis, OR 97331-5752, United States dCSIRO Sustainable Ecosystems, P.O. Box 284, Canberra, Australian Capital Territory 2601, Australia e Fungal Herbarium, The Swedish Museum of Natural History, Box 50007, Stockholm 104 OS, Sweden ARTICLE INFO ABSTRACT Article history: The functional roles of fungi in recovery of forest ecosystems after fire remain poorly documented. We Received 22 September 2008 observed macrofungi soon after fire at two widely separated sites, one in the Pacific Northwest United Received in revised form 6 November 2008 States and the other in southeastern mainland Australia. The range of species on-site was compared Accepted 11 November 2008 against macrofungi reported after the volcanic eruption at Mount St. Helens, also in the Pacific Northwest. Each of the three sites shared species, particularly representatives of the genus Anthracobia. Keywords: Soon after disturbance, we noted extensive mycelial mats and masses of fruit-bodies of this genus, Postfire recovery Erosion control particularly at heavily impacted microsites. -
Peziza Euchroa Assigned to the Genus Rhodotarzetta After 150 Years
Peziza euchroa assigned to the genus Rhodotarzetta after 150 years Ron BRONCKERS Abstract: In 2008 type specimens of Peziza euchroa were examined by Benkert, resulting in the combination Anthracobia euchroa. In the course of a recent investigation, questions arose and the original descriptions of P. euchroa were consulted. It became clear that P. euchroa in fact does not belong to the genus Anthracobia or any of the other genera to which it was previously assigned. P. euchroa is conspecific with Rhodotarzetta Ascomycete.org, 11 (4) : 141–144 rosea in every respect and the new combination Rhodotarzetta euchroa is proposed. Mise en ligne le 29/06/2019 Keywords: Ascomycota, Pezizales, Pyronemataceae, pyrophilous fungi, Rhodotarzetta rosea. 10.25664/ART-0267 Introduction Description of Peziza euchroa In the course of a study on the pyrophilous species Anthracobia the Finnish mycologist P.A. Karsten (Fig. 1) found this species in macrocystis (Cooke) Boud. (BronCKerS, in prep.), a literature exami- 1869. He first published it in 1870 under the name “Peziza euchlora nation was conducted. BenKert (2008) investigated the identity of Karst. exs. 817” and a year later as “Peziza euchroa Karst. exs. 816”, the Peziza euchroa P. Karst., regarded as an older name for A. macrocystis, latter most likely a correction of a lapsus calami, which later led to and combined it as Anthracobia euchroa (P. Karst.) Benkert. His article ambiguity regarding the labelling of his exsiccata (BenKert, 2008) in raised several questions and the original descriptions of P. euchroa the herbaria of Helsinki (H) and Stockholm (S). His species descrip- by KArSten (1870, 1871) were compared. -
Dinaric Karst Poljes Nature Conservation and Rural Development
DINARIC KARST POLJES NATURE CONSERVATION AND RURAL DEVELOPMENT Edited by: Peter Sackl, Stefan Ferger, Nermina Sarajlić, Dražen Kotrošan & Goran Topić Sarajevo, 2019 Contents I. Preface 5 Dinaric karst poljes – Jewels of the Western Balkans Tobias Salathé 6 Dinaric karst poljes – a look into the future Dražen Kotrošan & Nermina Sarajlić II. Karst poljes as wetlands of national and international importance - Worskhop proceedings and projects results 9 Spatial protection of Livanjsko polje in the framework of the UNEP/GEF project: Achieving biodiversity conservation through creation, effective management and spatial designation of protected areas and capacity building Maja Jaćimovska 17 The role of local breeds for the preservation of the ecosystems of karst pasture areas Gordan Šubara, Ida Štoka & Ante Ivanković 27 Dinaric karst poljes and their importance for mycobiota Neven Matočec, Nedim Jukić, Nihad Omerović & Ivana Kušan 51 Birds of Pešter karst polje Slobodan Puzović, Vladan Vučković, Nikola Stojnić, Goran Sekulić, Miloš Radaković, Nenad Dučić, Brano Rudić, Milan Ružić, Dimitrije Radišić, Bratislav Grubač, Marko Šćiban & Marko Raković 87 Results of two years of research of the bird fauna of Popovo polje Aleksandar Vukanović 93 Analysis of the occurrence of Lesser Kestrel (Falco naumanni) and Red-footed Falcon (Falco vespertinus) in the karst poljes of Bosnia and Herzegovina in the 2012-2017 period Goran Topić, Biljana Topić, Dražen Kotrošan, Mirko Šarac & Josip Vekić 113 Northern Lapwing (Vanellus vanellus) in the karst poljes of Bosnia -
Complete References List
Aanen, D. K. & T. W. Kuyper (1999). Intercompatibility tests in the Hebeloma crustuliniforme complex in northwestern Europe. Mycologia 91: 783-795. Aanen, D. K., T. W. Kuyper, T. Boekhout & R. F. Hoekstra (2000). Phylogenetic relationships in the genus Hebeloma based on ITS1 and 2 sequences, with special emphasis on the Hebeloma crustuliniforme complex. Mycologia 92: 269-281. Aanen, D. K. & T. W. Kuyper (2004). A comparison of the application of a biological and phenetic species concept in the Hebeloma crustuliniforme complex within a phylogenetic framework. Persoonia 18: 285-316. Abbott, S. O. & Currah, R. S. (1997). The Helvellaceae: Systematic revision and occurrence in northern and northwestern North America. Mycotaxon 62: 1-125. Abesha, E., G. Caetano-Anollés & K. Høiland (2003). Population genetics and spatial structure of the fairy ring fungus Marasmius oreades in a Norwegian sand dune ecosystem. Mycologia 95: 1021-1031. Abraham, S. P. & A. R. Loeblich III (1995). Gymnopilus palmicola a lignicolous Basidiomycete, growing on the adventitious roots of the palm sabal palmetto in Texas. Principes 39: 84-88. Abrar, S., S. Swapna & M. Krishnappa (2012). Development and morphology of Lysurus cruciatus--an addition to the Indian mycobiota. Mycotaxon 122: 217-282. Accioly, T., R. H. S. F. Cruz, N. M. Assis, N. K. Ishikawa, K. Hosaka, M. P. Martín & I. G. Baseia (2018). Amazonian bird's nest fungi (Basidiomycota): Current knowledge and novelties on Cyathus species. Mycoscience 59: 331-342. Acharya, K., P. Pradhan, N. Chakraborty, A. K. Dutta, S. Saha, S. Sarkar & S. Giri (2010). Two species of Lysurus Fr.: addition to the macrofungi of West Bengal. -
Supporting References for Nelson & Ellis
Supplemental Data for Nelson & Ellis (2018) The citations below were used to create Figures 1 & 2 in Nelson, G., & Ellis, S. (2018). The History and Impact of Digitization and Digital Data Mobilization on Biodiversity Research. Publication title by year, author (at least one ADBC funded author or not), and data portal used. This list includes papers that cite the ADBC program, iDigBio, TCNs/PENs, or any of the data portals that received ADBC funds at some point. Publications were coded as "referencing" ADBC if the authors did not use portal data or resources; it includes publications where data was deposited or archived in the portal as well as those that mention ADBC initiatives. Scroll to the bottom of the document for a key regarding authors (e.g., TCNs) and portals. Citation Year Author Portal used Portal or ADBC Program was referenced, but data from the portal not used Acevedo-Charry, O. A., & Coral-Jaramillo, B. (2017). Annotations on the 2017 Other Vertnet; distribution of Doliornis remseni (Cotingidae ) and Buthraupis macaulaylibrary wetmorei (Thraupidae ). Colombian Ornithology, 16, eNB04-1 http://asociacioncolombianadeornitologia.org/wp- content/uploads/2017/11/1412.pdf [Accessed 4 Apr. 2018] Adams, A. J., Pessier, A. P., & Briggs, C. J. (2017). Rapid extirpation of a 2017 Other VertNet North American frog coincides with an increase in fungal pathogen prevalence: Historical analysis and implications for reintroduction. Ecology and Evolution, 7, (23), 10216-10232. Adams, R. P. (2017). Multiple evidences of past evolution are hidden in 2017 Other SEINet nrDNA of Juniperus arizonica and J. coahuilensis populations in the trans-Pecos, Texas region. -
Two New Genus Records for Turkish Mycota
MYCOTAXON Volume 111, pp. 477–480 January–March 2010 Two new genus records for Turkish mycota Yusuf Uzun1, Kenan Demirel1, Abdullah Kaya2* & Fahrettin Gücin3 *[email protected] 1Yüzüncü Yıl University, Science & Arts Faculty TR 65080, Van Turkey 2Adıyaman University, Education Faculty TR 02040, Adıyaman Turkey 3Fatih University Science & Arts Faculty TR 34500, Istanbul Turkey Abstract — The genera Geopyxis (Pyronemataceae) and Asterophora (Lyophyllaceae) are recorded from Turkey for the first time, based on collections of Geopyxis carbonaria and Asterophora lycoperdoides. Short descriptions and photographs of the taxa are provided. Key words —Ascomycota, Basidiomycota, biodiversity, macrofungi Introduction Geopyxis carbonaria (Pyronemataceae) is an abundant post-fire discomycete in coniferous forests. This fleshy mushroom has a complex life cycle and is mycorrhizal on deep roots of members of the Pinaceae, and fruits only when the trees die (Vrålstad et al. 1998). Since it often fruits prolifically after wildfires, it has also been considered to be a possible indicator of imminent morel fruiting (Obst & Brown 2000). Asterophora lycoperdoides (Lyophyllaceae) is a relatively rare basidiomycete that parasitizes other mushrooms in the family Russulaceae, especially Russula nigricans and Russula densifolia. It usually fruits after the host has blackened and begun to decay (Kuo 2006). The fungus generally reproduces asexually by brown powdery chlamydospores formed on the cap surface; its gills, which are often absent or deformed, produce sexual basidiospores only infrequently (Roody 2003). According to checklists (Sesli & Denchev 2009) and recently published data (Solak et al. 2009, Kaya 2009), neither of the above taxa have previously been recorded from Turkey. The study aims to contribute to the macromycota of Turkey. -
Ecology and Management of Morels Harvested from the Forests of Western North America
United States Department of Ecology and Management of Agriculture Morels Harvested From the Forests Forest Service of Western North America Pacific Northwest Research Station David Pilz, Rebecca McLain, Susan Alexander, Luis Villarreal-Ruiz, General Technical Shannon Berch, Tricia L. Wurtz, Catherine G. Parks, Erika McFarlane, Report PNW-GTR-710 Blaze Baker, Randy Molina, and Jane E. Smith March 2007 Authors David Pilz is an affiliate faculty member, Department of Forest Science, Oregon State University, 321 Richardson Hall, Corvallis, OR 97331-5752; Rebecca McLain is a senior policy analyst, Institute for Culture and Ecology, P.O. Box 6688, Port- land, OR 97228-6688; Susan Alexander is the regional economist, U.S. Depart- ment of Agriculture, Forest Service, Alaska Region, P.O. Box 21628, Juneau, AK 99802-1628; Luis Villarreal-Ruiz is an associate professor and researcher, Colegio de Postgraduados, Postgrado en Recursos Genéticos y Productividad-Genética, Montecillo Campus, Km. 36.5 Carr., México-Texcoco 56230, Estado de México; Shannon Berch is a forest soils ecologist, British Columbia Ministry of Forests, P.O. Box 9536 Stn. Prov. Govt., Victoria, BC V8W9C4, Canada; Tricia L. Wurtz is a research ecologist, U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station, Boreal Ecology Cooperative Research Unit, Box 756780, University of Alaska, Fairbanks, AK 99775-6780; Catherine G. Parks is a research plant ecologist, U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station, Forestry and Range Sciences Laboratory, 1401 Gekeler Lane, La Grande, OR 97850-3368; Erika McFarlane is an independent contractor, 5801 28th Ave. NW, Seattle, WA 98107; Blaze Baker is a botanist, U.S. -
A Monograph of Otidea (Pyronemataceae, Pezizomycetes)
Persoonia 35, 2015: 166–229 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158515X688000 A monograph of Otidea (Pyronemataceae, Pezizomycetes) I. Olariaga1, N. Van Vooren2, M. Carbone3, K. Hansen1 Key words Abstract The easily recognised genus Otidea is subjected to numerous problems in species identification. A number of old names have undergone various interpretations, materials from different continents have not been compared and Flavoscypha misidentifications occur commonly. In this context, Otidea is monographed, based on our multiple gene phylogenies ITS assessing species boundaries and comparative morphological characters (see Hansen & Olariaga 2015). All names ITS1 minisatellites combined in or synonymised with Otidea are dealt with. Thirty-three species are treated, with full descriptions and LSU colour illustrations provided for 25 of these. Five new species are described, viz. O. borealis, O. brunneo parva, O. ore- Otideopsis gonensis, O. pseudoleporina and O. subformicarum. Otidea cantharella var. minor and O. onotica var. brevispora resinous exudates are elevated to species rank. Otideopsis kaushalii is combined in the genus Otidea. A key to the species of Otidea is given. An LSU dataset containing 167 sequences (with 44 newly generated in this study) is analysed to place collections and determine whether the named Otidea sequences in GenBank were identified correctly. Fourty-nine new ITS sequences were generated in this study. The ITS region is too variable to align across Otidea, but had low intraspecific variation and it aided in species identifications. Thirty type collections were studied, and ITS and LSU sequences are provided for 12 of these. A neotype is designated for O.