A Monograph of Otidea (Pyronemataceae, Pezizomycetes)
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Chorioactidaceae: a New Family in the Pezizales (Ascomycota) with Four Genera
mycological research 112 (2008) 513–527 journal homepage: www.elsevier.com/locate/mycres Chorioactidaceae: a new family in the Pezizales (Ascomycota) with four genera Donald H. PFISTER*, Caroline SLATER, Karen HANSENy Harvard University Herbaria – Farlow Herbarium of Cryptogamic Botany, Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Avenue, Cambridge, MA 02138, USA article info abstract Article history: Molecular phylogenetic and comparative morphological studies provide evidence for the Received 15 June 2007 recognition of a new family, Chorioactidaceae, in the Pezizales. Four genera are placed in Received in revised form the family: Chorioactis, Desmazierella, Neournula, and Wolfina. Based on parsimony, like- 1 November 2007 lihood, and Bayesian analyses of LSU, SSU, and RPB2 sequence data, Chorioactidaceae repre- Accepted 29 November 2007 sents a sister clade to the Sarcosomataceae, to which some of these taxa were previously Corresponding Editor: referred. Morphologically these genera are similar in pigmentation, excipular construction, H. Thorsten Lumbsch and asci, which mostly have terminal opercula and rounded, sometimes forked, bases without croziers. Ascospores have cyanophilic walls or cyanophilic surface ornamentation Keywords: in the form of ridges or warts. So far as is known the ascospores and the cells of the LSU paraphyses of all species are multinucleate. The six species recognized in these four genera RPB2 all have limited geographical distributions in the northern hemisphere. Sarcoscyphaceae ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Sarcosomataceae SSU Introduction indicated a relationship of these taxa to the Sarcosomataceae and discussed the group as the Chorioactis clade. Only six spe- The Pezizales, operculate cup-fungi, have been put on rela- cies are assigned to these genera, most of which are infre- tively stable phylogenetic footing as summarized by Hansen quently collected. -
Biological Diversity
From the Editors’ Desk….. Biodiversity, which is defined as the variety and variability among living organisms and the ecological complexes in which they occur, is measured at three levels – the gene, the species, and the ecosystem. Forest is a key element of our terrestrial ecological systems. They comprise tree- dominated vegetative associations with an innate complexity, inherent diversity, and serve as a renewable resource base as well as habitat for a myriad of life forms. Forests render numerous goods and services, and maintain life-support systems so essential for life on earth. India in its geographical area includes 1.8% of forest area according to the Forest Survey of India (2000). The forests cover an actual area of 63.73 million ha (19.39%) and consist of 37.74 million ha of dense forests, 25.51 million ha of open forest and 0.487 million ha of mangroves, apart from 5.19 million ha of scrub and comprises 16 major forest groups (MoEF, 2002). India has a rich and varied heritage of biodiversity covering ten biogeographical zones, the trans-Himalayan, the Himalayan, the Indian desert, the semi-arid zone(s), the Western Ghats, the Deccan Peninsula, the Gangetic Plain, North-East India, and the islands and coasts (Rodgers; Panwar and Mathur, 2000). India is rich at all levels of biodiversity and is one of the 12 megadiversity countries in the world. India’s wide range of climatic and topographical features has resulted in a high level of ecosystem diversity encompassing forests, wetlands, grasslands, deserts, coastal and marine ecosystems, each with a unique assemblage of species (MoEF, 2002). -
CZECH MYCOLOGY Publication of the Czech Scientific Society for Mycology
CZECH MYCOLOGY Publication of the Czech Scientific Society for Mycology Volume 54 March 2003 Number 3-4 Taxonomic revision of the genus Cheilymenia - 7. A reassessment of the sections Paracheilymeniae and Raripilosae. J i ř í M o r a v e c r / -• P. O. Box 17/A, CZ-679 04 Adamov-1, Czech Republic Moravec J . (2003): Taxonomic revision of the genus Cheilymenia - 7. A reassessment of the sections Paracheilymeniae and Raripilosae. - Czech Mycol. 54: 113-133 Two of the sections of the genus Cheilymenia Boud., sect. Paracheilymeniae, and sect. Raripilosae, originally proposed in the infrageneric arrangement published in Moravec (1990) were reassessed. The section Paracheilymeniae is newly subdivided into three series: ser. Paracheilymeniae (introduced in detail in Moravec 1992), ser. Raripilosae (Moravec 1990) stat. n. (originally the separate section Raripilosae) and the here newly proposed monotypical ser. Glabrae ser. n. Two species of the ser. Raripilosae, Cheilymenia raripila (W. Phillips) Dennis, Cheilymenia coprogena (Berk, et Broome) Rifai and the type species of the new ser. Glabrae ser. n., Cheilymenia bohemica (Velen.) J. Moravec, are treated in details. All the taxa are illustrated with line drawings, photographs and SEM photomicrographs. Examination of the type material [K(M)] has revealed that Lasiobolus dubius Starbáck is a later synonym of Cheilymenia raripila. Key words: Cheilymenia, section Paracheilymeniae, series Paracheilymeniae, series R ari pilosae, series Glabrae ser. n., section Micropilosae, taxonomic revision, Discomycetes: Pezizales, Pyronemataceae. Moravec J . (2003): Taxonomická revize rodu Cheilymenia - 7. Nové hodnocení sekcí Paracheilymeniae a Raripilosae. - Czech Mycol. 54: 113-133 Jsou přehodnoceny dvě ze sekcí rodu Cheilymenia Boud., sect. -
The Ascomycota
Papers and Proceedings of the Royal Society of Tasmania, Volume 139, 2005 49 A PRELIMINARY CENSUS OF THE MACROFUNGI OF MT WELLINGTON, TASMANIA – THE ASCOMYCOTA by Genevieve M. Gates and David A. Ratkowsky (with one appendix) Gates, G. M. & Ratkowsky, D. A. 2005 (16:xii): A preliminary census of the macrofungi of Mt Wellington, Tasmania – the Ascomycota. Papers and Proceedings of the Royal Society of Tasmania 139: 49–52. ISSN 0080-4703. School of Plant Science, University of Tasmania, Private Bag 55, Hobart, Tasmania 7001, Australia (GMG*); School of Agricultural Science, University of Tasmania, Private Bag 54, Hobart, Tasmania 7001, Australia (DAR). *Author for correspondence. This work continues the process of documenting the macrofungi of Mt Wellington. Two earlier publications were concerned with the gilled and non-gilled Basidiomycota, respectively, excluding the sequestrate species. The present work deals with the non-sequestrate Ascomycota, of which 42 species were found on Mt Wellington. Key Words: Macrofungi, Mt Wellington (Tasmania), Ascomycota, cup fungi, disc fungi. INTRODUCTION For the purposes of this survey, all Ascomycota having a conspicuous fruiting body were considered, excluding Two earlier papers in the preliminary documentation of the endophytes. Material collected during forays was described macrofungi of Mt Wellington, Tasmania, were confined macroscopically shortly after collection, and examined to the ‘agarics’ (gilled fungi) and the non-gilled species, microscopically to obtain details such as the size of the -
Scutellinia Crinita
© Demetrio Merino Alcántara [email protected] Condiciones de uso Scutellinia crinita (Bull.) Lambotte, Mém. Soc. roy. Sci. Liège, Série 2 14: 301 (prepr.) (1887) [1888] Pyronemataceae, Pezizales, Pezizomycetidae, Pezizomycetes, Pezizomycotina, Ascomycota, Fungi ≡ Aleurina crinita (Bull.) Sacc. & P. Syd., Syll. fung. (Abellini) 16: 739 (1902) = Ciliaria crinita (Bull.) Boud., Hist. Class. Discom. Eur. (Paris): 62 (1907) = Humaria crinita (Bull.) Quél., Enchir. fung. (Paris): 285 (1886) = Lachnea cervorum Velen., Monogr. Discom. Bohem. (Prague): 308 (1934) = Lachnea crinita (Bull.) Gillet, Les Discomycètes 3: 75 (1880) = Lachnea crinita (Bull.) Rehm, in Winter, Rabenh. Krypt.-Fl., Edn 2 (Leipzig) 1.3(lief. 44): 1065 (1895) [1896] = Lachnea setosa f. cervorum (Velen.) Svrček, Acta Mus. Nat. Prag. 4B(no. 6 (bot. no. 1)): 47 (1948) = Peziza crinita Bull., Herb. Fr. (Paris) 9: tab. 416, fig. 2 (1789) = Peziza crinita subsp. chermesina Pers., Mycol. eur. (Erlanga) 1: 256 (1822) = Peziza crinita Bull., Herb. Fr. (Paris) 9: tab. 416, fig. 2 (1789) subsp. crinita = Phaeopezia crinita (Bull.) Sacc., Syll. fung. (Abellini) 8: 474 (1889) = Scutellinia cervorum (Velen.) Svrček, Česká Mykol. 25(2): 83 (1971) = Scutellinia crinita (Bull.) Lambotte, Mém. Soc. roy. Sci. Liège, Série 2 14: 301 (prepr.) (1887) [1888] var. crinita = Scutellinia crinita var. discreta (Kullman & Raitv.) Matočec & Krisai, in Matočec, Krisai-Greilhuber & Scheuer, Öst. Z. Pilzk. 14: 328 (2005) = Scutellinia scutellata var. cervorum (Velen.) Le Gal, Bull. trimest. Soc. mycol. Fr. 82: 317 (1966) = Scutellinia scutellata var. discreta Kullman & Raitv., in Kullman, Scripta Mycol., Tartu 10: 100 (1982) = Scutellinia setosa f. cervorum (Velen.) Svrček, Česká Mykol. 16: 108 (1962) = Trichaleuris crinita (Bull.) Clem., Gen. fung. -
Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
A Synopsis of the Saddle Fungi (Helvella: Ascomycota) in Europe – Species Delimitation, Taxonomy and Typification
Persoonia 39, 2017: 201–253 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2017.39.09 A synopsis of the saddle fungi (Helvella: Ascomycota) in Europe – species delimitation, taxonomy and typification I. Skrede1,*, T. Carlsen1, T. Schumacher1 Key words Abstract Helvella is a widespread, speciose genus of large apothecial ascomycetes (Pezizomycete: Pezizales) that are found in terrestrial biomes of the Northern and Southern Hemispheres. This study represents a beginning on molecular phylogeny assessing species limits and applying correct names for Helvella species based on type material and specimens in the Pezizales university herbaria (fungaria) of Copenhagen (C), Harvard (FH) and Oslo (O). We use morphology and phylogenetic systematics evidence from four loci – heat shock protein 90 (hsp), translation elongation factor alpha (tef), RNA polymerase II (rpb2) and the nuclear large subunit ribosomal DNA (LSU) – to assess species boundaries in an expanded sample of Helvella specimens from Europe. We combine the morphological and phylogenetic information from 55 Helvella species from Europe with a small sample of Helvella species from other regions of the world. Little intraspecific variation was detected within the species using these molecular markers; hsp and rpb2 markers provided useful barcodes for species delimitation in this genus, while LSU provided more variable resolution among the pertinent species. We discuss typification issues and identify molecular characteristics for 55 European Helvella species, designate neo- and epitypes for 30 species, and describe seven Helvella species new to science, i.e., H. alpicola, H. alpina, H. carnosa, H. danica, H. nannfeldtii, H. pubescens and H. -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
Orbilia Ultrastructure, Character Evolution and Phylogeny of Pezizomycotina
Mycologia, 104(2), 2012, pp. 462–476. DOI: 10.3852/11-213 # 2012 by The Mycological Society of America, Lawrence, KS 66044-8897 Orbilia ultrastructure, character evolution and phylogeny of Pezizomycotina T.K. Arun Kumar1 INTRODUCTION Department of Plant Biology, University of Minnesota, St Paul, Minnesota 55108 Ascomycota is a monophyletic phylum (Lutzoni et al. 2004, James et al. 2006, Spatafora et al. 2006, Hibbett Rosanne Healy et al. 2007) comprising three subphyla, Taphrinomy- Department of Plant Biology, University of Minnesota, cotina, Saccharomycotina and Pezizomycotina (Su- St Paul, Minnesota 55108 giyama et al. 2006, Hibbett et al. 2007). Taphrinomy- Joseph W. Spatafora cotina, according to the current classification (Hibbett Department of Botany and Plant Pathology, Oregon et al. 2007), consists of four classes, Neolectomycetes, State University, Corvallis, Oregon 97331 Pneumocystidiomycetes, Schizosaccharomycetes, Ta- phrinomycetes, and an unplaced genus, Saitoella, Meredith Blackwell whose members are ecologically and morphologically Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 highly diverse (Sugiyama et al. 2006). Soil Clone Group 1, poorly known from geographically wide- David J. McLaughlin spread environmental samples and a single culture, Department of Plant Biology, University of Minnesota, was suggested as a fourth subphylum (Porter et al. St Paul, Minnesota 55108 2008). More recently however the group has been described as a new class of Taphrinomycotina, Archae- orhizomycetes (Rosling et al. 2011), based primarily on Abstract: Molecular phylogenetic analyses indicate information from rRNA sequences. The mode of that the monophyletic classes Orbiliomycetes and sexual reproduction in Taphrinomycotina is ascogen- Pezizomycetes are among the earliest diverging ous without the formation of ascogenous hyphae, and branches of Pezizomycotina, the largest subphylum except for the enigmatic, apothecium-producing of the Ascomycota. -
Species of Hypomyces and Nectria Occurring on Discomycetes Author(S): Clark T
Species of Hypomyces and Nectria Occurring on Discomycetes Author(s): Clark T. Rogerson and Gary J. Samuels Source: Mycologia, Vol. 77, No. 5 (Sep. - Oct., 1985), pp. 763-783 Published by: Taylor & Francis, Ltd. Stable URL: http://www.jstor.org/stable/3793285 Accessed: 09-08-2017 17:28 UTC REFERENCES Linked references are available on JSTOR for this article: http://www.jstor.org/stable/3793285?seq=1&cid=pdf-reference#references_tab_contents You may need to log in to JSTOR to access the linked references. JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at http://about.jstor.org/terms Taylor & Francis, Ltd. is collaborating with JSTOR to digitize, preserve and extend access to Mycologia This content downloaded from 93.56.160.3 on Wed, 09 Aug 2017 17:28:22 UTC All use subject to http://about.jstor.org/terms Mycologia, 77(5), 1985, pp. 763-783. ? 1985, by The New York Botanical Garden, Bronx, NY 10458 SPECIES OF HYPOMYCES AND NECTRIA OCCURRING ON DISCOMYCETES Clark T. Rogerson The New York Botanical Garden, Bronx, New York 10458 AND Gary J. Samuels Plant Diseases Division, DSIR, Private Bag, Auckland, New Zealand ABSTRACT Hypomyces papulasporae (synanamorphs = Papulaspora sp., Sibirina sp.), H. papula- sporae var. -
Spor E Pr I N Ts
SPOR E PR I N TS BULLETIN OF THE PUGET SOUND MYCOLOGICAL SOCIETY Number 503 June 2014 WOULD A ROSY GOMPHIDIUS BY ANY OTHER NAME SMELL AS SWEET? Rebellion against dual-naming system gains Many fungi are shape-shifters seemingly designed momentum but still faces a few hurdles to defy human efforts at categorization. The same species, sometimes the same individual, can reproduce by Susan Milius two ways: sexually, by mixing genes with a partner of Science News April 18, 2014 the same species, or asexually, by cloning to produce To a visitor walking down, down, down the white genetically identical offspring. cinder block stairwell and through metal doors into the The problem is that reproductive modes can take basement, Building 010A takes on the hushed, mile- entirely different anatomical forms. A species that long-beige-corridor feel of some secret government looks like a miniature corn dog when it is reproducing installation in a blockbuster movie. sexually might look like fuzzy white twigs when it is in Biologist Shannon Dominick wears a striped sweater cloning mode. A gray smudge on a sunflower seed head as she strolls through this Fort Knox of fungus, merrily might just be the asexually reproducing counterpart of discussing certain specimens in the vaults that are a tiny satellite dish-shaped thing. commonly called “dog vomit fungi.” When many of these pairs were discovered, sometimes This basement on the campus of the Agricultural decades apart, sometimes growing right next to each Research Service in Beltsville, Md., holds the second other, it was difficult or impossible to demonstrate that largest fungus collection in the world, with at least one they were the same thing. -
Geopora Sumneriana
© Demetrio Merino Alcántara [email protected] Condiciones de uso Geopora sumneriana (Cooke) M. Torre, An. Inst. bot. A.J. Cavanilles 32(2): 96 (1976) Pyronemataceae, Pezizales, Pezizomycetidae, Pezizomycetes, Pezizomycotina, Ascomycota, Fungi = Lachnea lanuginosa (Bull.) Gillet, Champignons de France, Discom.(3): 78 (1880) [1879] ≡ Lachnea sumneri (Berk.) W. Phillips ex Sacc., Syll. fung. (Abellini) 19: 1017 (1910) ≡ Lachnea sumneriana (Cooke) W. Phillips, Man. Brit. Discomyc. (London): 213 (1887) = Peziza lanuginosa Bull., Herb. Fr. 9: tab. 396:2 (1789) = Peziza lanuginosa Bull., Herb. Fr. 9: tab. 396:2 (1789) var. lanuginosa ≡ Peziza lanuginosa var. sumneri Berk., Ann. Mag. nat. Hist., Ser. 3 18: 125 (1866) ≡ Peziza sumneri (Berk.) Berk. ≡ Peziza sumneriana Cooke, Mycogr., Vol. 1. Discom. (London): fig. 111 (1876) = Sarcoscypha lanuginosa (Bull.) Cooke, Mycogr., Vol. 1. Discom. (London): 178 (1877) ≡ Sarcosphaera sumneriana (Cooke) Lindau, 1: 182 (1897) ≡ Sepultaria sumneri (Berk.) Boud., Hist. Class. Discom. Eur. (Paris): 59 (1907) ≡ Sepultaria sumneri var. calvescens Grélet, Bull. Soc. bot. Centre-Ouest, Nouv. sér. 8: 27 (1939) ≡ Sepultaria sumneri (Berk.) Boud., Hist. Class. Discom. Eur. (Paris): 59 (1907) var. sumneri ≡ Sepultaria sumneriana (Cooke) Massee, Brit. Fung.-Fl. (London) 4: 391 (1895) Material estudiado: Jaén, Santa Elena, La Aliseda, 30S VH4842, 660 m, en suelo bajo Cedrus atlantica, 6-IV-2009, leg. Dianora Estrada y Demetrio Merino, JA-CUSSTA: 7896. Jaén, Santa Elena, La Aliseda, 30S VH4842, 660 m, en suelo bajo Cedrus atlantica, 31-III-2014, leg. Dianora Estrada y Demetrio Merino, JA-CUSSTA: 7884. Marruecos, Chefchaouen, Plaza España, 30S UD0590, 1.728 m, en suelo bajo Cedrus atlantica, 14-IV-2014, leg. Concha Moren- te, Dianora Estrada, Tomás Illescas, Demetrio Merino y miembros de la asociación Mairei de Algeciras, JA-CUSSTA: 7897.