The Species of Alseuosmia (Alseuosmiaceae)
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Toward a Resolution of Campanulid Phylogeny, with Special Reference to the Placement of Dipsacales
TAXON 57 (1) • February 2008: 53–65 Winkworth & al. • Campanulid phylogeny MOLECULAR PHYLOGENETICS Toward a resolution of Campanulid phylogeny, with special reference to the placement of Dipsacales Richard C. Winkworth1,2, Johannes Lundberg3 & Michael J. Donoghue4 1 Departamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Caixa Postal 11461–CEP 05422-970, São Paulo, SP, Brazil. [email protected] (author for correspondence) 2 Current address: School of Biology, Chemistry, and Environmental Sciences, University of the South Pacific, Private Bag, Laucala Campus, Suva, Fiji 3 Department of Phanerogamic Botany, The Swedish Museum of Natural History, Box 50007, 104 05 Stockholm, Sweden 4 Department of Ecology & Evolutionary Biology and Peabody Museum of Natural History, Yale University, P.O. Box 208106, New Haven, Connecticut 06520-8106, U.S.A. Broad-scale phylogenetic analyses of the angiosperms and of the Asteridae have failed to confidently resolve relationships among the major lineages of the campanulid Asteridae (i.e., the euasterid II of APG II, 2003). To address this problem we assembled presently available sequences for a core set of 50 taxa, representing the diver- sity of the four largest lineages (Apiales, Aquifoliales, Asterales, Dipsacales) as well as the smaller “unplaced” groups (e.g., Bruniaceae, Paracryphiaceae, Columelliaceae). We constructed four data matrices for phylogenetic analysis: a chloroplast coding matrix (atpB, matK, ndhF, rbcL), a chloroplast non-coding matrix (rps16 intron, trnT-F region, trnV-atpE IGS), a combined chloroplast dataset (all seven chloroplast regions), and a combined genome matrix (seven chloroplast regions plus 18S and 26S rDNA). Bayesian analyses of these datasets using mixed substitution models produced often well-resolved and supported trees. -
The New Zealand Rain Forest: a Comparison with Tropical Rain Forest! J
The New Zealand Rain Forest: A Comparison with Tropical Rain Forest! J. W. DAWSON2 and B. V. SNEDDON2 ABSTRACT: The structure of and growth forms and habits exhibited by the New Zealand rain forest are described and compared with those of lowland tropical rain forest. Theories relating to the frequent regeneration failure of the forest dominants are outlined. The floristic affinities of the forest type are discussed and it is suggested that two main elements can be recognized-lowland tropical and montane tropical. It is concluded that the New Zealand rain forest is comparable to lowland tropical rain forest in structure and in range of special growth forms and habits. It chiefly differs in its lower stature, fewer species, and smaller leaves. The floristic similarity between the present forest and forest floras of the Tertiary in New Zealand suggest that the former may be a floristically reduced derivative of the latter. PART 1 OF THIS PAPER describes the structure The approximate number of species of seed and growth forms of the New Zealand rain plants in these forests is 240. From north to forest as exemplified by a forest in the far north. south there is an overall decrease in number of In Part 2, theories relating to the regeneration species. At about 38°S a number of species, of the dominant trees in the New Zealand rain mostly trees and shrubs, drop out or become forest generally are reviewed briefly, and their restricted to coastal sites, but it is not until about relevance to the situation in the study forest is 42°S, in the South Island, that many of the con considered. -
Framework for Assessing the Susceptibility of Management Areas to Deer Impacts
Framework for assessing the susceptibility of management areas to deer impacts SCIENCE FOR CONSERVATION 213 D.M. Forsyth, D.A. Coomes, G. Nugent Published by Department of Conservation P.O. Box 10-420 Wellington, New Zealand Science for Conservation is a scientific monograph series presenting research funded by New Zealand Department of Conservation (DOC). Manuscripts are internally and externally peer-reviewed; resulting publications are considered part of the formal international scientific literature. Titles are listed in the DOC Science Publishing catalogue on the departmental website http:// www.doc.govt.nz and printed copies can be purchased from [email protected] © Copyright January 2003, New Zealand Department of Conservation ISSN 1173–2946 ISBN 0–478–22347–1 This report was prepared for publication by DOC Science Publishing, Science & Research Unit; editing by Geoff Gregory and layout by Ruth Munro. Publication was approved by the Manager, Science & Research Unit, Science Technology and Information Services, Department of Conservation, Wellington. CONTENTS Abstract 5 1. Introduction 6 2. Sources of information 6 2.1 Ecology and impacts of deer: theoretical and empirical models 6 2.2 Diet preferences 6 2.3 Forest types most affected by deer 7 2.4 Guidelines for deer management 8 3. Main findings 9 3.1 Ecology of deer in New Zealand 9 3.2 Mathematical and conceptual models of plant–ungulate interactions 10 3.2.1 Density-dependence of animal populations 10 3.2.2 Annual variation in food availability 11 3.2.3 Annual -
Bio 308-Course Guide
COURSE GUIDE BIO 308 BIOGEOGRAPHY Course Team Dr. Kelechi L. Njoku (Course Developer/Writer) Professor A. Adebanjo (Programme Leader)- NOUN Abiodun E. Adams (Course Coordinator)-NOUN NATIONAL OPEN UNIVERSITY OF NIGERIA BIO 308 COURSE GUIDE National Open University of Nigeria Headquarters 14/16 Ahmadu Bello Way Victoria Island Lagos Abuja Office No. 5 Dar es Salaam Street Off Aminu Kano Crescent Wuse II, Abuja e-mail: [email protected] URL: www.nou.edu.ng Published by National Open University of Nigeria Printed 2013 ISBN: 978-058-434-X All Rights Reserved Printed by: ii BIO 308 COURSE GUIDE CONTENTS PAGE Introduction ……………………………………......................... iv What you will Learn from this Course …………………............ iv Course Aims ……………………………………………............ iv Course Objectives …………………………………………....... iv Working through this Course …………………………….......... v Course Materials ………………………………………….......... v Study Units ………………………………………………......... v Textbooks and References ………………………………........... vi Assessment ……………………………………………….......... vi End of Course Examination and Grading..................................... vi Course Marking Scheme................................................................ vii Presentation Schedule.................................................................... vii Tutor-Marked Assignment ……………………………….......... vii Tutors and Tutorials....................................................................... viii iii BIO 308 COURSE GUIDE INTRODUCTION BIO 308: Biogeography is a one-semester, 2 credit- hour course in Biology. It is a 300 level, second semester undergraduate course offered to students admitted in the School of Science and Technology, School of Education who are offering Biology or related programmes. The course guide tells you briefly what the course is all about, what course materials you will be using and how you can work your way through these materials. It gives you some guidance on your Tutor- Marked Assignments. There are Self-Assessment Exercises within the body of a unit and/or at the end of each unit. -
Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
Breeding Systems and Reproduction of Indigenous Shrubs in Fragmented
Copyright is owned by the Author of the thesis. Permission is given for a copy to be downloaded by an individual for the purpose of research and private study only. The thesis may not be reproduced elsewhere without the permission of the Author. Breeding systems and reproduction of indigenous shrubs in fragmented ecosystems A thesis submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy III Plant Ecology at Massey University by Merilyn F Merrett .. � ... : -- �. � Massey University Palrnerston North, New Zealand 2006 Abstract Sixteen native shrub species with various breeding systems and pollination syndromes were investigated in geographically separated populations to determine breeding systems, reproductive success, population structure, and habitat characteristics. Of the sixteen species, seven are hermaphroditic, seven dioecious, and two gynodioecious. Two of the dioecious species are cryptically dioecious, producing what appear to be perfect, hermaphroditic flowers,but that functionas either male or female. One of the study species, Raukauaanomalus, was thought to be dioecious, but proved to be hermaphroditic. Teucridium parvifolium, was thought to be hermaphroditic, but some populations are gynodioecious. There was variation in self-compatibility among the fo ur AIseuosmia species; two are self-compatible and two are self-incompatible. Self incompatibility was consistent amongst individuals only in A. quercifolia at both study sites, whereas individuals in A. macrophylia ranged from highly self-incompatible to self-compatible amongst fo ur study sites. The remainder of the hermaphroditic study species are self-compatible. Five of the species appear to have dual pollination syndromes, e.g., bird-moth, wind-insect, wind-animal. High levels of pollen limitation were identified in three species at fo ur of the 34 study sites. -
(OUV) of the Wet Tropics of Queensland World Heritage Area
Handout 2 Natural Heritage Criteria and the Attributes of Outstanding Universal Value (OUV) of the Wet Tropics of Queensland World Heritage Area The notes that follow were derived by deconstructing the original 1988 nomination document to identify the specific themes and attributes which have been recognised as contributing to the Outstanding Universal Value of the Wet Tropics. The notes also provide brief statements of justification for the specific examples provided in the nomination documentation. Steve Goosem, December 2012 Natural Heritage Criteria: (1) Outstanding examples representing the major stages in the earth’s evolutionary history Values: refers to the surviving taxa that are representative of eight ‘stages’ in the evolutionary history of the earth. Relict species and lineages are the elements of this World Heritage value. Attribute of OUV (a) The Age of the Pteridophytes Significance One of the most significant evolutionary events on this planet was the adaptation in the Palaeozoic Era of plants to life on the land. The earliest known (plant) forms were from the Silurian Period more than 400 million years ago. These were spore-producing plants which reached their greatest development 100 million years later during the Carboniferous Period. This stage of the earth’s evolutionary history, involving the proliferation of club mosses (lycopods) and ferns is commonly described as the Age of the Pteridophytes. The range of primitive relict genera representative of the major and most ancient evolutionary groups of pteridophytes occurring in the Wet Tropics is equalled only in the more extensive New Guinea rainforests that were once continuous with those of the listed area. -
Descriptions of Some Mature Kauri Forests of New Zealand, By
DESCRIPTIONS OF SOME MATURE KAURI FORESTS OF NEW ZEALAND by Moinuddin Ahmed and John Ogden Department of Botany, University of Auckland, Private Bag 92019, Auckland ABSTRACT A quantitative sampling of 25 mature kauri stands, throughout the species natural limits, was carried out. Each kauri stand is described in terms of its phytosociological attributes (frequency, density and basal area) for kauri and associated canopy and subcanopy species. A species list of plants under 10cm dbh is also given with their relative frequencies in each stand. In all stands kauri comprises most of the basal area. It is associated with 10 different co-dominant species. However, most of the forests have a similar species composition. It is suggested that all these kauri forest samples belong to one overall association. INTRODUCTION The vegetation of various kauri forests has been described by Adam (1889), Cockayne (1908, 1928), Cranwell and Moore (1936), Sexton (1941), Anon (1949) and more recently Barton (1972), Anon (1980) and Ecroyd (1982). A quantitative description of some kauri forests was given by Palmer (1982), Ogden (1983) and Wardle (1984). However, due to extensive past disturbance and milling, most of the above accounts do not describe the natural forest state. Observations on the population dynamics of mature kauri forests were presented by Ahmed and Ogden (1987) and Ogden et al. (1987) while multivariate analyses were performed by Ahmed (1988). However, no comprehensive attempt has yet been made to analyse mature undisturbed kauri forest stands in relation to their species composition. Kauri forests have a restricted distribution in the North Island. Among these remnants, there are few, if any, truly untouched sites. -
Phylogeny and Phylogenetic Nomenclature of the Campanulidae Based on an Expanded Sample of Genes and Taxa
Systematic Botany (2010), 35(2): pp. 425–441 © Copyright 2010 by the American Society of Plant Taxonomists Phylogeny and Phylogenetic Nomenclature of the Campanulidae based on an Expanded Sample of Genes and Taxa David C. Tank 1,2,3 and Michael J. Donoghue 1 1 Peabody Museum of Natural History & Department of Ecology & Evolutionary Biology, Yale University, P. O. Box 208106, New Haven, Connecticut 06520 U. S. A. 2 Department of Forest Resources & Stillinger Herbarium, College of Natural Resources, University of Idaho, P. O. Box 441133, Moscow, Idaho 83844-1133 U. S. A. 3 Author for correspondence ( [email protected] ) Communicating Editor: Javier Francisco-Ortega Abstract— Previous attempts to resolve relationships among the primary lineages of Campanulidae (e.g. Apiales, Asterales, Dipsacales) have mostly been unconvincing, and the placement of a number of smaller groups (e.g. Bruniaceae, Columelliaceae, Escalloniaceae) remains uncertain. Here we build on a recent analysis of an incomplete data set that was assembled from the literature for a set of 50 campanulid taxa. To this data set we first added newly generated DNA sequence data for the same set of genes and taxa. Second, we sequenced three additional cpDNA coding regions (ca. 8,000 bp) for the same set of 50 campanulid taxa. Finally, we assembled the most comprehensive sample of cam- panulid diversity to date, including ca. 17,000 bp of cpDNA for 122 campanulid taxa and five outgroups. Simply filling in missing data in the 50-taxon data set (rendering it 94% complete) resulted in a topology that was similar to earlier studies, but with little additional resolution or confidence. -
Review of the Sporoderm Ultrastructure of Members of the Asterales S
ISSN 0031-0301, Paleontological Journal, 2006, Vol. 40, Suppl. 5, pp. S656–S663. © Pleiades Publishing, Inc., 2006. Review of the Sporoderm Ultrastructure of Members of the Asterales S. V. Polevova Biological Faculty, Moscow State University, Leninskie gory 1, Moscow, 119992 Russia e-mail: [email protected] Received March 23, 2006 Abstract—Palynomorphological characteristics of the order Asterales are discussed. Particular attention is paid to the pollen morphology of basal families of this group and to that of problematic taxa that are considered as sister groups to the group under study. Ultrastructurally similar sporoderms of several families, including (1) Asteraceae, Calyceraceae, and Goodeniaceae; (2) Campanulaceae, Phellinaceae, and Menyanthaceae; (3) Rousseaceae, Abrophyllaceae, and Columelliaceae, are described. Pollen grains of Alseuosmiaceae and Stylidiaceae show unique ultrastructural features of the exine. DOI: 10.1134/S0031030106110128 Key words: Asterales, pollen grains, ultrastructure, phylogenetic systematics. INTRODUCTION MATERIAL AND METHODS At different times, concepts of the group of Aster- Pollen grains of 18 members of 12 families were aceae and its relatives has been considered to include studied. The material was received from the herbarium different families. These variants concerned a distinct of Komarov Botanical Institution of the Russian Acad- circle of taxa. Thus, the system of Takhatajan (1997) emy of Sciences, St. Petersburg. included the subclass Asteridae with 14 families; the (1) Family Goodeniaceae: Brunonia australis system of Thorne (2000) included the suborder Astera- R. Brown and Dampiera eriocephala Vriese. nae with nine families. (2) Family Columelliaceae: Columellia sericea Recently, relationships of Asteraceae have been sig- F.A. Humbolt, A.J.A. Bonpland et C.S. -
Early Evolution of the Angiosperm Clade Asteraceae in the Cretaceous of Antarctica
Early evolution of the angiosperm clade Asteraceae in the Cretaceous of Antarctica Viviana D. Barredaa,1,2, Luis Palazzesia,b,1, Maria C. Telleríac, Eduardo B. Oliverod, J. Ian Rainee, and Félix Forestb aDivisión Paleobotánica, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia,” Consejo Nacional de Investigaciones Cientificas y Técnicas, Buenos Aires C1405DJR, Argentina; bJodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, United Kingdom; cLaboratorio de Sistemática y Biología Evolutiva, Museo de La Plata, La Plata B1900FWA, Argentina; dCentro Austral de Investigaciones Científicas, Consejo Nacional de Investigaciones Cientificas y Técnicas, 9410 Ushuaia, Tierra del Fuego, Argentina; and eDepartment of Palaeontology, GNS Science, Lower Hutt 5040, New Zealand Edited by Michael J. Donoghue, Yale University, New Haven, CT, and approved July 15, 2015 (received for review December 10, 2014) The Asteraceae (sunflowers and daisies) are the most diverse Here we report fossil pollen evidence from exposed Campanian/ family of flowering plants. Despite their prominent role in extant Maastrichtian sediments from the Antarctic Peninsula (Fig. 1, Fig. S1, terrestrial ecosystems, the early evolutionary history of this family and SI Materials and Methods, Fossiliferous Localities)(7)thatradi- remains poorly understood. Here we report the discovery of a cally changes our understanding of the early evolution of Asteraceae. number of fossil pollen grains preserved in dinosaur-bearing deposits from the Late Cretaceous of Antarctica that drastically pushes back Results and Discussion the timing of assumed origin of the family. Reliably dated to ∼76–66 The pollen grains reported here and discovered in the Late Cre- Mya, these specimens are about 20 million years older than previ- taceous of Antarctica are tricolporate, microechinate, with long ously known records for the Asteraceae. -
Phylogenetics of Asterids Based on 3 Coding and 3 Non-Coding Chloroplast DNA Markers and the Utility of Non-Coding DNA at Higher Taxonomic Levels
MOLECULAR PHYLOGENETICS AND EVOLUTION Molecular Phylogenetics and Evolution 24 (2002) 274–301 www.academicpress.com Phylogenetics of asterids based on 3 coding and 3 non-coding chloroplast DNA markers and the utility of non-coding DNA at higher taxonomic levels Birgitta Bremer,a,e,* Kaare Bremer,a Nahid Heidari,a Per Erixon,a Richard G. Olmstead,b Arne A. Anderberg,c Mari Kaallersj€ oo,€ d and Edit Barkhordariana a Department of Systematic Botany, Evolutionary Biology Centre, Norbyva€gen 18D, SE-752 36 Uppsala, Sweden b Department of Botany, University of Washington, P.O. Box 355325, Seattle, WA, USA c Department of Phanerogamic Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden d Laboratory for Molecular Systematics, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden e The Bergius Foundation at the Royal Swedish Academy of Sciences, P.O. Box 50017, SE-104 05 Stockholm, Sweden Received 25 September 2001; received in revised form 4 February 2002 Abstract Asterids comprise 1/4–1/3 of all flowering plants and are classified in 10 orders and >100 families. The phylogeny of asterids is here explored with jackknife parsimony analysis of chloroplast DNA from 132 genera representing 103 families and all higher groups of asterids. Six different markers were used, three of the markers represent protein coding genes, rbcL, ndhF, and matK, and three other represent non-coding DNA; a region including trnL exons and the intron and intergenic spacers between trnT (UGU) to trnF (GAA); another region including trnV exons and intron, trnM and intergenic spacers between trnV (UAC) and atpE, and the rps16 intron.