The Life of Apteronotus Rostratus in the Wild
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CRISPR/Cas9 Genome Editing in Weakly Electric Fish
Journal of Visualized Experiments www.jove.com Video Article Silencing the Spark: CRISPR/Cas9 Genome Editing in Weakly Electric Fish Savvas J. Constantinou1, Linh Nguyen2, Frank Kirschbaum2, Vielka L. Salazar3, Jason R. Gallant1 1 Department of Integrative Biology, Michigan State University 2 Faculty of Life Sciences, Unit of Biology and Ecology of Fishes, Humboldt University 3 Department of Biology, Cape Breton University Correspondence to: Jason R. Gallant at [email protected] URL: https://www.jove.com/video/60253 DOI: doi:10.3791/60253 Keywords: Biology, Issue 152, CRISPR/Cas9, electric fish, single cell microinjection, scn4aa, electric organ discharge, genome modification, mormyrid, gymnotiform Date Published: 10/27/2019 Citation: Constantinou, S.J., Nguyen, L., Kirschbaum, F., Salazar, V.L., Gallant, J.R. Silencing the Spark: CRISPR/Cas9 Genome Editing in Weakly Electric Fish. J. Vis. Exp. (152), e60253, doi:10.3791/60253 (2019). Abstract Electroreception and electrogenesis have changed in the evolutionary history of vertebrates. There is a striking degree of convergence in these independently derived phenotypes, which share a common genetic architecture. This is perhaps best exemplified by the numerous convergent features of gymnotiforms and mormyrids, two species-rich teleost clades that produce and detect weak electric fields and are called weakly electric fish. In the 50 years since the discovery that weakly electric fish use electricity to sense their surroundings and communicate, a growing community of scientists has gained tremendous insights into evolution of development, systems and circuits neuroscience, cellular physiology, ecology, evolutionary biology, and behavior. More recently, there has been a proliferation of genomic resources for electric fish. -
§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
2017 JMIH Program Book Web Version 6-26-17.Pub
Organizing Societies American Elasmobranch Society 33rd Annual Meeting President: Dean Grubbs Treasurer: Cathy Walsh Secretary: Jennifer Wyffels Editor and Webmaster: David Shiffman Immediate Past President: Chris Lowe American Society of Ichthyologists and Herpetologists 97th Annual Meeting President: Carole Baldwin President Elect: Brian Crother Past President: Maureen A. Donnelly Prior Past President: Larry G. Allen Treasurer: F. Douglas Martin Secretary: Prosanta Chakrabarty Editor: Christopher Beachy Herpetologists’ League 75th Annual Meeting President: David M. Green Immediate Past President: James Spotila Vice-President: David Sever Treasurer: Laurie Mauger Secretary: Renata Platenburg Publications Secretary: Ken Cabarle Communications Secretary: Wendy Palin Herpetologica Editor: Stephen Mullin Herpetological Monographs Editor: Michael Harvey Society for the Study of Amphibians and Reptiles 60th Annual Meeting President: Richard Shine President-Elect: Marty Crump Immediate Past-President: Aaron Bauer Secretary: Marion R. Preest Treasurer: Kim Lovich Publications Secretary: Cari-Ann Hickerson Thank you to our generous sponsor We would like to thank the following: Local Hosts David Hillis, University of Texas at Austin, LHC Chair Dean Hendrickson, University of Texas at Austin Becca Tarvin, University of Texas at Austin Anne Chambers, University of Texas at Austin Christopher Peterson, University of Texas at Austin Volunteers We wish to thank the following volunteers who have helped make the Joint Meeting of Ichthyologists and Herpetologists -
REVIEW Electric Fish: New Insights Into Conserved Processes of Adult Tissue Regeneration
2478 The Journal of Experimental Biology 216, 2478-2486 © 2013. Published by The Company of Biologists Ltd doi:10.1242/jeb.082396 REVIEW Electric fish: new insights into conserved processes of adult tissue regeneration Graciela A. Unguez Department of Biology, New Mexico State University, Las Cruces, NM 88003, USA [email protected] Summary Biology is replete with examples of regeneration, the process that allows animals to replace or repair cells, tissues and organs. As on land, vertebrates in aquatic environments experience the occurrence of injury with varying frequency and to different degrees. Studies demonstrate that ray-finned fishes possess a very high capacity to regenerate different tissues and organs when they are adults. Among fishes that exhibit robust regenerative capacities are the neotropical electric fishes of South America (Teleostei: Gymnotiformes). Specifically, adult gymnotiform electric fishes can regenerate injured brain and spinal cord tissues and restore amputated body parts repeatedly. We have begun to identify some aspects of the cellular and molecular mechanisms of tail regeneration in the weakly electric fish Sternopygus macrurus (long-tailed knifefish) with a focus on regeneration of skeletal muscle and the muscle-derived electric organ. Application of in vivo microinjection techniques and generation of myogenic stem cell markers are beginning to overcome some of the challenges owing to the limitations of working with non-genetic animal models with extensive regenerative capacity. This review highlights some aspects of tail regeneration in S. macrurus and discusses the advantages of using gymnotiform electric fishes to investigate the cellular and molecular mechanisms that produce new cells during regeneration in adult vertebrates. -
The Effect of Endocannabinoids on Carbachol Induced Contractions in the Rat Uterus 2008 REU Animal Behavior Abstract
The Effect of Endocannabinoids on Carbachol Induced Contractions in the Rat Uterus 2008 REU Animal Behavior Abstract Gilda Bobele Kinsey Institute and the Center for the Integrative Study of Animal Behavior Indiana University, Bloomington, IN Interest in endogenous cannabinoids has been generated by the well-document analgesic properties of exogenous cannabinoids, most familiarly Δ9-tetrahydrocannabinol. The endocannabinoid pathway is a complex signaling system involving CB1 and CB2 G- protein coupled receptors, which are activated by lipid ligands. Previous research has delineated the roles of both receptors in analgesia and nociception by using knockout mice and genetic studies in combination with pain model tests, but - due to pain tolerance differences in the strains of rat used and variation in pain models - previous tests on the properties of the CB1 and CB2 receptors have been conflicting. Regardless, regulation of the endocannabinoid pathway has the potential to regulate pain response and treat pain disorders. Part of the established endocannabinoid system involves a calcium-dependent transacylase-catalyzed enzymatic phosphorylation and hydrolysis that produces of N- acylethanolamines. Endocannabinoids such as anandamide have been shown to antagonize the spontaneous contractility of muscarinic smooth muscle ileum tissue, repressing the observed amplitude of contractions in a concentration-dependent fashion. Contractions in uterine and other smooth muscle tissue are stimulated by the parasympathetic nervous system’s release of acetylcholine, and thus an organ bath experiment was used to manipulate the pathway and observe resulting contractions. Tissue harvested from rats determined to be in estrus of a regularly proceeding cycle was dissected into four samples and mounted in buffer solution at 32 degrees Celsius. -
The Cyphomyrus Myers 1960 (Osteoglossiformes: Mormyridae) of the Lufira Basin (Upper Lualaba: DR Congo): a Generic Reassignment and the Description of a New Species
Received: 9 January 2019 Accepted: 15 December 2019 DOI: 10.1111/jfb.14237 SPECIAL ISSUE REGULAR PAPER FISH The Cyphomyrus Myers 1960 (Osteoglossiformes: Mormyridae) of the Lufira basin (Upper Lualaba: DR Congo): A generic reassignment and the description of a new species Christian Mukweze Mulelenu1,2,3,4 | Bauchet Katemo Manda2,3,4 | Eva Decru3,4 | Auguste Chocha Manda2 | Emmanuel Vreven3,4 1Département de Zootechnie, Faculté des Sciences Agronomiques, Université de Abstract Kolwezi, Kolwezi, Democratic Republic of the Within a comparative morphological framework, Hippopotamyrus aelsbroecki, only Congo known from the holotype originating from Lubumbashi, most probably the Lubumbashi 2Département de Gestion des Ressources Naturelles Renouvelables, Unité de recherche River, a left bank subaffluent of the Luapula River, is reallocated to the genus en Biodiversité et Exploitation durable des Cyphomyrus. This transfer is motivated by the fact that H. aelsbroecki possesses a Zones Humides, Université de Lubumbashi, Lubumbashi, Democratic Republic of the rounded or vaulted predorsal profile, an insertion of the dorsal fin far anterior to the Congo level of the insertion of the anal fin, and a compact, laterally compressed and deep 3Vertebrate Section, Ichthyology, Royal Museum for Central Africa, Tervuren, Belgium body. In addition, a new species of Cyphomyrus is described from the Lufira basin, 4Laboratory of Biodiversity and Evolutionary Cyphomyrus lufirae. Cyphomyrus lufirae was collected in large parts of the Middle Lufira, Genomics, KU Leuven, Leuven, Belgium upstream of the Kyubo Falls and just downstream of these falls in the lower Lufira and Correspondence its nearby left bank affluent, the Luvilombo River. The new species is distinguished Emmanuel Vreven, Curator of Fishes from all its congeners, that is, firstly, from C. -
Department of Biology (Pdf)
Department of Biology 26 Summary The Department of Biology at the University of Louisiana at Lafayette took its current form in the late 1980s, with the merger of the Biology and Microbiology Departments. In Spring of 2019, the department has 28 professorial faculty members, 6 emeritus faculty members, and 7 instructors. Almost all professorial faculty members are active in research and serve as graduate faculty. Our graduate programs are also supported by 8 adjunct faculty members; their affiliations include the United States Geological Survey, the National Oceanographic and Atmospheric Administration, and the Smithsonian Institution. In this report, we summarize research accomplishments of our departmental faculty since 2013. The report is focused on our research strengths; however, faculty members have also been awarded considerable honors and funding for educational activities. We also briefly summarize the growth and size of our degree programs. Grant Productivity From 2013 through 2018, the Department of Biology has secured over 16 million dollars of new research funding (the total number of dollars associated with these grants, which are often multi- institutional, is considerably higher). Publications The faculty has a strong record of publication, with 279 papers published in peer-reviewed journals in the last 5 years. An additional 30 papers were published in conference proceedings or other edited volumes. Other Accomplishments Other notable accomplishments between 2013 and 2018 include faculty authorship of five books and edited volumes. Faculty members have served as editors, associate editors, or editorial board members for 21 different journals or as members of 34 society boards or grant review panels. They presented 107 of presentations as keynote addresses or invited seminars. -
Convergent Evolution of Weakly Electric Fishes from Floodplain Habitats in Africa and South America
Environmental Biology of Fishes 49: 175–186, 1997. 1997 Kluwer Academic Publishers. Printed in the Netherlands. Convergent evolution of weakly electric fishes from floodplain habitats in Africa and South America Kirk O. Winemiller & Alphonse Adite Department of Wildlife and Fisheries Sciences, Texas A&M University, College Station, TX 77843, U.S.A. Received 19.7.1995 Accepted 27.5.1996 Key words: diet, electrogenesis, electroreception, foraging, morphology, niche, Venezuela, Zambia Synopsis An assemblage of seven gymnotiform fishes in Venezuela was compared with an assemblage of six mormyri- form fishes in Zambia to test the assumption of convergent evolution in the two groups of very distantly related, weakly electric, noctournal fishes. Both assemblages occur in strongly seasonal floodplain habitats, but the upper Zambezi floodplain in Zambia covers a much larger area. The two assemblages had broad diet overlap but relatively narrow overlap of morphological attributes associated with feeding. The gymnotiform assemblage had greater morphological variation, but mormyriforms had more dietary variation. There was ample evidence of evolutionary convergence based on both morphology and diet, and this was despite the fact that species pairwise morphological similarity and dietary similarity were uncorrelated in this dataset. For the most part, the two groups have diversified in a convergent fashion within the confines of their broader niche as nocturnal invertebrate feeders. Both assemblages contain midwater planktivores, microphagous vegetation- dwellers, macrophagous benthic foragers, and long-snouted benthic probers. The gymnotiform assemblage has one piscivore, a niche not represented in the upper Zambezi mormyriform assemblage, but present in the form of Mormyrops deliciousus in the lower Zambezi and many other regions of Africa. -
The Air-Breathing Behaviour of Brevimyrus Niger (Osteoglossomorpha, Mormyridae)
Journal of Fish Biology (2007) 71, 279–283 doi:10.1111/j.1095-8649.2007.01473.x, available onlineathttp://www.blackwell-synergy.com The air-breathing behaviour of Brevimyrus niger (Osteoglossomorpha, Mormyridae) T. MORITZ* AND K. E. LINSENMAIR Lehrstuhl fur¨ Tiero¨kologie und Tropenbiologie, Theodor-Boveri-Institut, Universita¨t Wurzburg,¨ Am Hubland, 97074 Wurzburg,¨ Germany (Received 2 May 2006, Accepted 6 February 2007) Brevimyrus niger is reported to breathe atmospheric air, confirming previous documenta- tion of air breathing in this species. Air is taken up by rising to the water surface and gulping, or permanently resting just below the surface, depending on the environmental conditions. # 2007 The Authors Journal compilation # 2007 The Fisheries Society of the British Isles Key words: elephantfishes; Osteoglossomorpha; weakly electric fish. The Mormyridae consists of 201 weakly electric fishes endemic to Africa (Nelson, 2006). They belong to the Osteoglossomorpha among which air-breathing behaviour is known from several families. All genera of the Osteoglossidae are able to breathe atmospheric air utilizing their swimbladder as a respiratory organ, i.e. Heterotis niloticus (Cuvier) (Luling,¨ 1977), Arapaima gigas (Schinz) (Luling,¨ 1964, 1977). Similarly, Pantodon buchholzi Peters (Schwarz, 1969), which is the only member of the Pantodontidae, and the members of the Notopteridae (Graham, 1997) are air-breathers. A close relative to the mormyrids, Gymnarchus niloticus Cuvier, the only member of the Gymnarchidae, is also well known to breathe air (Hyrtl, 1856; Bertyl, 1958). In the remaining two families within the Osteoglossomorpha air breathing has never been reported from the Hiodontidae (Graham, 1997) and only for a single species, Brevimyrus niger (Gunther),¨ within the Mormyridae (Benech & Lek, 1981; Bigorne, 2003). -
A Review of the Systematic Biology of Fossil and Living Bony-Tongue Fishes, Osteoglossomorpha (Actinopterygii: Teleostei)
Neotropical Ichthyology, 16(3): e180031, 2018 Journal homepage: www.scielo.br/ni DOI: 10.1590/1982-0224-20180031 Published online: 11 October 2018 (ISSN 1982-0224) Copyright © 2018 Sociedade Brasileira de Ictiologia Printed: 30 September 2018 (ISSN 1679-6225) Review article A review of the systematic biology of fossil and living bony-tongue fishes, Osteoglossomorpha (Actinopterygii: Teleostei) Eric J. Hilton1 and Sébastien Lavoué2,3 The bony-tongue fishes, Osteoglossomorpha, have been the focus of a great deal of morphological, systematic, and evolutio- nary study, due in part to their basal position among extant teleostean fishes. This group includes the mooneyes (Hiodontidae), knifefishes (Notopteridae), the abu (Gymnarchidae), elephantfishes (Mormyridae), arawanas and pirarucu (Osteoglossidae), and the African butterfly fish (Pantodontidae). This morphologically heterogeneous group also has a long and diverse fossil record, including taxa from all continents and both freshwater and marine deposits. The phylogenetic relationships among most extant osteoglossomorph families are widely agreed upon. However, there is still much to discover about the systematic biology of these fishes, particularly with regard to the phylogenetic affinities of several fossil taxa, within Mormyridae, and the position of Pantodon. In this paper we review the state of knowledge for osteoglossomorph fishes. We first provide an overview of the diversity of Osteoglossomorpha, and then discuss studies of the phylogeny of Osteoglossomorpha from both morphological and molecular perspectives, as well as biogeographic analyses of the group. Finally, we offer our perspectives on future needs for research on the systematic biology of Osteoglossomorpha. Keywords: Biogeography, Osteoglossidae, Paleontology, Phylogeny, Taxonomy. Os peixes da Superordem Osteoglossomorpha têm sido foco de inúmeros estudos sobre a morfologia, sistemática e evo- lução, particularmente devido à sua posição basal dentre os peixes teleósteos. -
Curriculum Vitae
Zakon, H.H. 1 CURRICULUM VITAE Harold H. Zakon Section of Neurobiology phone: (512)-471-0194, -3440 The University of Texas fax: (512)-471-9651 Austin, TX 78712 E-mail: [email protected] EDUCATION 1981-1983: Postdoctoral fellow, Scripps Institution of Oceanography, University of California, San Diego, Lab. of Dr. T.H. Bullock. 1974-1981: Ph.D. in Neurobiology and Behavior, Cornell University, Ithaca, NY. 1968-1972: B. S. with High Honors, Marlboro College, Marlboro, VT. PROFESSIONAL EXPERIENCE 2001-- Adjunct Professor, Marine Biological Laboratory, Woods Hole, MA. 1999-2006 Chairman, Section of Neurobiology, The University of Texas at Austin. 1998-- Professor, Section of Neurobiology, The University of Texas, Austin. 1994-1998 Professor, Dept. of Zoology, The University of Texas, Austin. 1988-1993: Assoc. Professor, Dept. of Zoology, The University of Texas, Austin. 1983-1988: Assist. Professor, Dept. of Zoology, The University of Texas, Austin. 1981-1983: Postdoctoral fellow at The University of California, San Diego, Calif. 1974-1981: Teaching and Research Assist., Graduate Program at Cornell. 1972-1974: Research Assist., Dept. Psychiatric Research, Harvard Medical School, Cambridge, MA. PROFESSIONAL SOCIETIES Society for Neuroscience; International Society for Neuroethology; Association for Research in Otolaryngology; American Association for the Advancement of Science; International Brain Research Organization, Society for Behavioral Neuroendocrinology. PROFESSIONAL SERVICE Reviewer for: Animal Behavior; Brain, Behavior & Evolution; Brain Research; Comparative Physiology & Biochemistry; BMC Neuroscience; Current Biology; General & Comparative Endocrinology; FEBS Letters; Genes, Brain & Behavior; Hearing Research; Hormones and Behavior; J. Biological Chemistry.; J. Comparative Neurology; J. Comparative Physiology A; J. Experimental Biology; J. Molecular Evolution; J. Neurobiology; J. Neurophysiology; J. -
Resolving Deep Nodes in an Ancient Radiation of Neotropical Fishes in The
Resolving Deep Nodes in an Ancient Radiation of Neotropical Fishes in the Presence of Conflicting Signals from Incomplete Lineage Sorting SUPPLEMENTARY MATERIAL Table S1. Concordance factors and their 95% CI for the most frequent bipartitios in the concordance tree inferred from the Bayesian concordance analysis in BUCKy with values of α=1, 5, 10 and ∞. Bipartition α=1 α=5 α=10 α=∞ Gymnotiformes|… 0.961 (0.954-0.970) 0.961 (0.951-0.970) 0.96 (0.951-0.967) 0.848 (0.826-0.872) Apteronotidae|… 0.981 (0.973-0.989) 0.979 (0.970-0.986) 0.981 (0.973-0.989) 0.937 (0.918-0.954) Sternopygidae|… 0.558 (0.527-0.601) 0.565 (0.541-0.590) 0.571 (0.541-0.598) 0.347 (0.315-0.380) Pulseoidea|… 0.386 (0.353-0.435) 0.402 (0.372-0.438) 0.398 (0.353-0.440) 0.34 (0.304-0.375) Gymnotidae|… 0.29 (0.242-0.342) 0.277 (0.245-0.312) 0.285 (0.236-0.326) 0.157 (0.128-0.188) Rhamphichthyoidea|… 0.908 (0.886-0.924) 0.903 (0.872-0.924) 0.908 (0.886-0.924) 0.719 (0.690-0.747) Pulseoidea|… 0.386 (0.353-0.435) 0.402 (0.372-0.438) 0.398 (0.353-0.440) 0.34 (0.304-0.375) Table S2. Bootstrap support values recovered for the major nodes of the Gymnotiformes species tree inferred in ASTRAL-II for each one of the filtered and non-filtered datasets.