Copepoda, Cyclopoida, Clausidiidae) from Korea
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The Plankton Lifeform Extraction Tool: a Digital Tool to Increase The
Discussions https://doi.org/10.5194/essd-2021-171 Earth System Preprint. Discussion started: 21 July 2021 Science c Author(s) 2021. CC BY 4.0 License. Open Access Open Data The Plankton Lifeform Extraction Tool: A digital tool to increase the discoverability and usability of plankton time-series data Clare Ostle1*, Kevin Paxman1, Carolyn A. Graves2, Mathew Arnold1, Felipe Artigas3, Angus Atkinson4, Anaïs Aubert5, Malcolm Baptie6, Beth Bear7, Jacob Bedford8, Michael Best9, Eileen 5 Bresnan10, Rachel Brittain1, Derek Broughton1, Alexandre Budria5,11, Kathryn Cook12, Michelle Devlin7, George Graham1, Nick Halliday1, Pierre Hélaouët1, Marie Johansen13, David G. Johns1, Dan Lear1, Margarita Machairopoulou10, April McKinney14, Adam Mellor14, Alex Milligan7, Sophie Pitois7, Isabelle Rombouts5, Cordula Scherer15, Paul Tett16, Claire Widdicombe4, and Abigail McQuatters-Gollop8 1 10 The Marine Biological Association (MBA), The Laboratory, Citadel Hill, Plymouth, PL1 2PB, UK. 2 Centre for Environment Fisheries and Aquacu∑lture Science (Cefas), Weymouth, UK. 3 Université du Littoral Côte d’Opale, Université de Lille, CNRS UMR 8187 LOG, Laboratoire d’Océanologie et de Géosciences, Wimereux, France. 4 Plymouth Marine Laboratory, Prospect Place, Plymouth, PL1 3DH, UK. 5 15 Muséum National d’Histoire Naturelle (MNHN), CRESCO, 38 UMS Patrinat, Dinard, France. 6 Scottish Environment Protection Agency, Angus Smith Building, Maxim 6, Parklands Avenue, Eurocentral, Holytown, North Lanarkshire ML1 4WQ, UK. 7 Centre for Environment Fisheries and Aquaculture Science (Cefas), Lowestoft, UK. 8 Marine Conservation Research Group, University of Plymouth, Drake Circus, Plymouth, PL4 8AA, UK. 9 20 The Environment Agency, Kingfisher House, Goldhay Way, Peterborough, PE4 6HL, UK. 10 Marine Scotland Science, Marine Laboratory, 375 Victoria Road, Aberdeen, AB11 9DB, UK. -
Diversity and Life-Cycle Analysis of Pacific Ocean Zooplankton by Video Microscopy and DNA Barcoding: Crustacea
Journal of Aquaculture & Marine Biology Research Article Open Access Diversity and life-cycle analysis of Pacific Ocean zooplankton by video microscopy and DNA barcoding: Crustacea Abstract Volume 10 Issue 3 - 2021 Determining the DNA sequencing of a small element in the mitochondrial DNA (DNA Peter Bryant,1 Timothy Arehart2 barcoding) makes it possible to easily identify individuals of different larval stages of 1Department of Developmental and Cell Biology, University of marine crustaceans without the need for laboratory rearing. It can also be used to construct California, USA taxonomic trees, although it is not yet clear to what extent this barcode-based taxonomy 2Crystal Cove Conservancy, Newport Coast, CA, USA reflects more traditional morphological or molecular taxonomy. Collections of zooplankton were made using conventional plankton nets in Newport Bay and the Pacific Ocean near Correspondence: Peter Bryant, Department of Newport Beach, California (Lat. 33.628342, Long. -117.927933) between May 2013 and Developmental and Cell Biology, University of California, USA, January 2020, and individual crustacean specimens were documented by video microscopy. Email Adult crustaceans were collected from solid substrates in the same areas. Specimens were preserved in ethanol and sent to the Canadian Centre for DNA Barcoding at the Received: June 03, 2021 | Published: July 26, 2021 University of Guelph, Ontario, Canada for sequencing of the COI DNA barcode. From 1042 specimens, 544 COI sequences were obtained falling into 199 Barcode Identification Numbers (BINs), of which 76 correspond to recognized species. For 15 species of decapods (Loxorhynchus grandis, Pelia tumida, Pugettia dalli, Metacarcinus anthonyi, Metacarcinus gracilis, Pachygrapsus crassipes, Pleuroncodes planipes, Lophopanopeus sp., Pinnixa franciscana, Pinnixa tubicola, Pagurus longicarpus, Petrolisthes cabrilloi, Portunus xantusii, Hemigrapsus oregonensis, Heptacarpus brevirostris), DNA barcoding allowed the matching of different life-cycle stages (zoea, megalops, adult). -
A New Species of Clausidiidae (Copepoda, Poecilostomatoida) Associated with the Bivalve Ruditapes Philippinarum in Korea
Cah. Biol. Mar. (1996)37: 1-6 A new species of Clausidiidae (Copepoda, Poecilostomatoida) associated with the bivalve Ruditapes philippinarum in Korea Il-Hoi KIM(1) AND Jan H. STOCK(2) (1)Department of Biology, Kangreung National University, Kangreung, 210-702, South Korea (2)c/o Institute of Systematics and Population Biology, University of Amsterdam, P.O.Box 94766, 1090 GT Amsterdam, The Netherlands Abstract : A small-sized clausidiid copepod was found associated with the commercially important bivalve, Ruditapes phi- lippinarum, from a Korean coastal lagoon. Since it resembles morphologically a European form known as Hersiliodes late- ricius, it is attributed to a new species, H. exiguus n. sp., of the same genus. The uneasy distinction between the genera Hersiliodes and the very similar Hemicyclops is discussed. Résumé : Un Copépode de petite taille a été découvert associé à un bivalve commercialement important, Ruditapes philip- pinarum, provenant d'un lagon côtier coréen. Parce qu'il ressemble morphologiquement à une forme européenne connue comme Hersiliodes latericius, il a été attribué au même genre, avec le nom d'espèce H. exiguus n. sp. La distinction délica- te entre les genres Hersiliodes et Hemicyclops, très similaires l'un de l'autre, est discutée. Keywords : Copepoda Clausidiidae, Hersiliodes exiguus n. sp., Hemicyclops, Ruditapes, Korea Introduction and 1 S (paratypes, partially dissected). Holotype, allotype The short-necked clam, Ruditapes philippinarum and 4 paratypes preserved in Zoölogisch Museum (Adams & Reeve, 1850) is an edible and commercially Amsterdam (cat. no. ZMA Co. 201.813), 2 9 and 1 3 kept important bivalve, originally inhabiting southeast Asian and by I.-H. -
Host Selection of the Symbiotic Copepod Clausidium Dissimile in Two Sympatric Populations of Ghost Shrimp
MARINE ECOLOGY PROGRESS SERIES Vol. 256: 151–159, 2003 Published July 17 Mar Ecol Prog Ser Host selection of the symbiotic copepod Clausidium dissimile in two sympatric populations of ghost shrimp J. L. Corsetti1, K. M. Strasser 2,* 1Department of Biology, University of Tampa, 401 W Kennedy Blvd., Tampa, Florida 33606, USA 2Biological Sciences Department, Ferris State University, 820 Campus Drive, ASC 2004, Big Rapids, Michigan 49307, USA ABSTRACT: Ghost shrimp, Lepidophthalmus louisianensis (Schmitt 1935) and Sergio trilobata (Biffar 1970) are 2 common burrowing decapod crustaceans in Tampa Bay, Florida, which affect the benthic community through bioturbation. The burrow also plays a crucial role in determining benthic com- munity structure, since it may house several symbionts, one of which is the copepod Clausidium dis- simile Wilson, 1921. This study was conducted to investigate factors that affect the density of C. dis- simile on ghost shrimp specimens both in the field and in the laboratory. Collections of L. louisianensis and S. trilobata were made over a 15 mo period to determine the prevalence of C. dis- simile in the field. Analysis of monthly field data showed that host shrimp (p = 0.0001), and sampling month (p = 0.0310) were significantly correlated with the host-size adjusted density of the symbiont C. dissimile, with more copepods preferring specimens of S. trilobata over L. louisianensis. Although host sex did not have a significant effect on host-size adjusted copepod density, percentage preva- lence of copepods was significantly higher for females than males in S. trilobata (p < 0.0001). Labora- tory experiments supported observations from the field in that C. -
Life History of the Copepod Hemicyclops Spinulosus (Poecilostomatoida, Clausidiidae) Associated with Crab Burrows with Notes On
Plankton Benthos Res 3(4): 189–201, 2008 Plankton & Benthos Research © The Plankton Society of Japan Life history of the copepod Hemicyclops spinulosus (Poecilostomatoida, Clausidiidae) associated with crab burrows with notes on male polymorphism and precopulatory mate guarding HIROSHI ITOH1 &SHUHEI NISHIDA2* 1 Suidosha Co. Ltd, 8–11–11 Ikuta, Tama, Kawasaki 214–0038, Japan 2 Ocean Research Institute, University of Tokyo, 1–15–1 Minamidai, Nakano, Tokyo 164–8639, Japan Received 9 January 2008; Accepted 30 May 2008 Abstract: A 25-month field survey was conducted to investigate the life cycle and seasonal population fluctuations in the poecilostomatoid copepod Hemicyclops spinulosus in the burrows of the ocypodid crab Macrophthalmus japonicus in the mud-flats of the Tama-River estuary, central Japan. On the basis of sample collections in the water column and from the crab burrows, it was confirmed that H. spinulosus is planktonic during the naupliar stages and settles on the bottom during the first copepodid stage to inhabit the burrows. Furthermore, the copepods’ reproduction took place mainly during early summer to autumn with a successive decrease from autumn to winter. A supplementary observation on the burrows of the polychaete Tylorrhynchus heterochaetus suggested that these burrows are another important habi- tat of H. spinulosus. There were additional discoveries of male polymorphism and precopulatory mate guarding behav- ior by males, suggesting an adaptation in the reproductive strategy of this copepod to their narrow habitat spaces and low population densities, in contrast to the congeneric species H. gomsoensis, which co-occurs in the estuary but attains much larger population sizes and is associated with hosts having much larger burrow spaces. -
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources http://www.dnr.sc.gov/marine/sertc/ Southeastern Regional Taxonomic Center Invertebrate Literature Library (updated 9 May 2012, 4056 entries) (1958-1959). Proceedings of the salt marsh conference held at the Marine Institute of the University of Georgia, Apollo Island, Georgia March 25-28, 1958. Salt Marsh Conference, The Marine Institute, University of Georgia, Sapelo Island, Georgia, Marine Institute of the University of Georgia. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Caprellidea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Gammaridea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1981). Stomatopods. FAO species identification sheets for fishery purposes. Eastern Central Atlantic; fishing areas 34,47 (in part).Canada Funds-in Trust. Ottawa, Department of Fisheries and Oceans Canada, by arrangement with the Food and Agriculture Organization of the United Nations, vols. 1-7. W. Fischer, G. Bianchi and W. B. Scott. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume II. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume III. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. -
Brooding in Cocculiniform Limpets (Gastropoda) and Familial Distinctiveness of the Nucellicolidae (Copepoda): Misconceptions Reviewed from a Chitonophilid Perspective
Biological Journal of the Linnean Society, 2002, 75, 187-217. With 16 figures Brooding in cocculiniform limpets (Gastropoda) and familial distinctiveness of the Nucellicolidae (Copepoda): misconceptions reviewed from a chitonophilid perspective RONY HUYS FLS1*, PABLO J. LÓPEZ-GONZÁLEZ2, ELISA ROLDÁN3 a n d ÁNGEL A. LUQUE3 1Department of Zoology, The Natural History Museum, Cromwell Road, London SW7 5BD, UK 2Departamento de Fisiología y Zoología, Facultad de Biología, Universidad de Sevilla, Reina Mercedes, 6,41012 Sevilla, Spain 3Laboratorio de Biología Marina, Departamento de Biología, Universidad Autónoma, 28049 Madrid, Spain Received 21 January 2001; accepted for publication 16 August 2001 Nauplii, copepodids and adults of a new mesoparasitic genus and species of Chitonophilidae,Lepetellicola brescia nii, are described from the palliai cavity of a deepwater cocculiniform limpet,Lepetella sierrai, collected in the Bay of Biscay and Gulf of Cádiz. Re-examination of the type material of the recently established Nucellicolidae revealed several important observational errors in the original description, such as the oversight of the rootlet system in the adult female and misinterpretations of the tagmosis and antennulary segmentation in the late copepodid. Lamb et al.’s (1996) criteria used to justify the familial distinctiveness of the Nucellicolidae are all invalid. The family is relegated to a junior synonym of the Chitonophilidae on the basis of overwhelming support provided by copepodid and adult morphology. The impact of heterochrony on the body plan of adults and developmental stages is discussed. Phylogenetic analysis supports a basal dichotomy dividing the Chitonophilidae into a mesoparasitic clade, utilizing exclusively polyplacophoran hosts, and a sisterclade grouping genera associated with chitons, prosobranch gas tropods and cocculiniform limpets. -
Title Studies on the Phylogenetic Implications of Ontogenetic
Studies on the Phylogenetic Implications of Ontogenetic Title Features in the Poecilostome Nauplii (Copepoda : Cyclopoida) Author(s) Izawa, Kunihiko PUBLICATIONS OF THE SETO MARINE BIOLOGICAL Citation LABORATORY (1987), 32(4-6): 151-217 Issue Date 1987-12-26 URL http://hdl.handle.net/2433/176145 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University Studies on the Phylogenetic Implications of Ontogenetic Features in the Poecilostome Nauplii (Copepoda: Cyclopoida) By Kunihiko Izawa Faculty ofBioresources, Mie University, Tsu, Mie 514, Japan With Text-figures 1-17 and Tables 1-3 Introduction The Copepoda includes a number of species that are parasitic or semi-parasitic onjin various aquatic animals (see Wilson, 1932). They live in association with par ticular hosts and exhibit various reductive tendencies (Gotto, 1979; Kabata, 1979). The reductive tendencies often appear as simplification and/or reduction of adult appendages, which have been considered as important key characters in their tax onomy and phylogeny (notably Wilson, op. cit.; Kabata, op. cit.). Larval morpholo gy has not been taken into taxonomic and phylogenetic consideration. This is par ticularly unfortunate when dealing with the poecilostome Cyclopoida, which include many species with transformed adults. Our knowledge on the ontogeny of the Copepoda have been accumulated through the efforts of many workers (see refer ences), but still it covers only a small part of the Copepoda. History of study on the nauplii of parasitic copepods goes back to the 1830's, as seen in the description of a nauplius of Lernaea (see Nordmann, 1832). I have been studying the ontogeny of the parasitic and semi-parasitic Copepoda since 1969 and have reported larval stages of various species (Izawa, 1969; 1973; 1975; 1986a, b). -
Phylum Arthrop0da: Crustacea
Chapter 17 Phylum Arthrop0da: Crustacea Alan W. Harveyy Joel W. Martin and Regina Wetzer INTRODUCTION planktivorous at some point in their pelagic life. Lecithotrophy is commonly associated with abbreviated Ruppert and Barnes (1996: 682) begin their introduc development, and in lecithotrophic species, at least tion to the subphylum Crustacea with the observation some of the cephalic appendages are often reduced or that "... crustacean diversity is so great that a descrip absent (Figures 17.2C-E) (Rabalais and Gore, 1985). tion of a ^typical' form is impossible," and this is as true In those taxa with planktonic larvae and benthic of the larvae as it is of the adults. Furthermore, larval adults, there is usually a morphologically distinct tran development is known for only a small percentage of sitional phase that settles out of the plankton and species in five of the six recognized classes of crustaceans, metamorphoses into the benthic post-larval phase and not at all for the class Remipedia, which suggests (Figures 17.9-12). Competent larvae use a wide variety that biologists have only begun to sample the existing of chemical and tactical cues to evaluate potential set diversity of crustacean larval types. Thus, the present tlement sites (Figure 17.11F), and are commonly able to chapter is in no way an exhaustive review of the fasci delay metamorphosis in the absence of such cues nating larval forms present in the Crustacea. It is meant (Figure 17.11H) (Crisp, 1974; Harvey, 1996; O'Connor to be, instead, merely a glimpse of larval diversity in the and Judge, 1999). -
Zoologische Mededelingen Uitgegeven Door Het
ZOOLOGISCHE MEDEDELINGEN UITGEGEVEN DOOR HET RIJKSMUSEUM VAN NATUURLIJKE HISTORIE TE LEIDEN (MINISTERIE VAN CULTUUR, RECREATIE EN MAATSCHAPPELIJK WERK) Deel 41 no. 13 27 juli 1966 HEMICYCLOPS THALASSIUS NOV. SPEC. (COPEPODA, CYCLOPOIDA) FROM MARDEL PLATA, WITH REVISIONARY NOTES ON THE FAMILY CLAUSIDIIDAE by W. VERVOORT Rijksmuseum van Natuurlijke Historie, Leiden, the Netherlands and FERNANDO RAMIREZ Instituto de Biologia marina, Mar del Plata, Argentina INTRODUCTION The discovery of a new species of Hemicyclops, found pelagically in Argentine coastal waters, has made it necessary for us to summarize the descriptions of the species of Hemicyclops Boeck, 1872. In the course of our investigation, the results of which are laid down is this paper, it became necessary to construct a new key for the identification of the genera of Clausidiidae, which will be presented below. We have thought it advisable to state very briefly the position of the genera, basing ourselves mainly on the recent review of this family by Bocquet & Stock (1957). We refrain, at the present stage, from presenting diagnoses of all genera. Many species are commensals or parasites of Invertebrates and the number of known species has considerably increased during the last years, a process which seems far from having come to an end at the present moment. The con- ceptions of generic units, therefore, are very likely to be unstable for some time to come. CLAUSIDIIDAE Embleton, 1901 The family name Clausidiidae has been suggested by Embleton (1901, 213) to replace the older name Hersiliidae Canu (1888: 792), the pre- occupied name of the type genus, Hersilia Philippi (1839: 128), being replaced by Clausidium Kossmann (1874: 11). -
Diagnostic Report’ to Guide Improvements to the Regular Reporting Process on the State of the Black Sea Environment
Commission on the Protection of the Black Sea Against Pollution Permanent Secretariat Final ‘Diagnostic Report’ to guide improvements to the regular reporting process on the state of the Black Sea environment Date: 03 th August 2010 1 List of Contents EXECUTIVE SUMMARY................................................................................................................................................ 7 ITRODUCTIO............................................................................................................................................................12 SECTIO I: BSIMAP AD BSIS ..................................................................................................................................16 SECTIO II: MOITORIG, DATA FLOWS TO THE BSC AD IDICATORS: ACHIEVEMETS AD THE BOTTLEECKS..............................................................................................................................................................27 II.1. MONITORING ..............................................................................................................................................27 II.1.1. Regional monitoring ..........................................................................................................................27 II.1.2. ational monitoring systems – status quo, gaps in data collected.....................................................29 II.1.2.1. Bulgaria...................................................................................................................................................... -
Crustacea, Poecilostomatoida, Clausidiidae
STUDIES ON THE NATURAL HISTORY OF THE CARIBBEAN REGION: Vol. 71, 1992 A new species of Hemicyclops (Crustacea, Copepoda, Poecilostomatoida, Clausidiidae) associated with hermit crabs in Curaçao by Jan H. Stock Abstract A STOCK, J. H. 1992. new species of Hemicyclops (Crustacea, Copepoda, Poecilostoma- toida, Clausidiidae) associated with hermit crabs in Curaçao. Stud. Nat. Hist. Caribbean Re- gion 71, Amsterdam 1992: 69-78. is described from the infralittoral of Hemicyclops geminatusn. sp. upper zone Curaçao (An- Calcinus tilles). It is a regular associate ofthree species ofhermit crabs: tibicen,Paguristes grayi, and Dardanus The be twin of columnaris venosus. new taxon appears to a species Hemicyclops HUMES, 1984, an associate of a stony coral off the Pacific coast of Panamá. words: hermit Curaçao. Key Hemicyclops geminatus n. sp., Copepoda, crabs, INTRODUCTION At present the genus Hemicyclops Boeck, 1873 (poecilostomatous Copepoda ofthe family Clausidiidae) counts 29 species. In a review of the genus, VER- VOORT & RAMIREZ (1966) consider 23 species as valid, thus neither22 (HUMES 1984; BOXSHALL & HUMES 1987), nor 27 (Ho & KIM 1990), nor 25 (Ho & KIM 1991). Moreover, VERVOORT & RAMIREZ list a number ofdubious taxa, based onjuveniles or imperfectly described. Since this review, the following to 1973, species have been added the genus: H. perinsignis Humes, H. • InstituteofTaxonomic Zoology, University ofAmsterdam, P.O. Box 4766, 1009 AT Amsterdam, The Netherlands. 70 JAN H. STOCK columnaris Humes, 1984, H. mortoni Boxshall & Humes, 1987, H. ctenidis Ho & Kim, 1990,H. gomsoensis Ho & Kim, 1991, and H. saxatilis Ho & Kim, 1991. These species have been recovered from various invertebrates, orhave been found in burrows ofvarious invertebrates and are possibly associated with the polychaete or crustacean occupants.