Pneumonia Due to Pandoraea Apista After Evacuation of Traumatic Intracranial Hematomas:A Case Report and Literature Review

Total Page:16

File Type:pdf, Size:1020Kb

Pneumonia Due to Pandoraea Apista After Evacuation of Traumatic Intracranial Hematomas:A Case Report and Literature Review Lin et al. BMC Infectious Diseases (2019) 19:869 https://doi.org/10.1186/s12879-019-4420-6 CASE REPORT Open Access Pneumonia due to Pandoraea Apista after evacuation of traumatic intracranial hematomas:a case report and literature review Chuanzhong Lin1,2, Ning Luo1, Qiang Xu2, Jianjun Zhang3, Mengting Cai4, Guanhao Zheng5 and Ping Yang2* Abstract Background: Pandoraea species is a newly described genus, which is multidrug resistant and difficult to identify. Clinical isolates are mostly cultured from cystic fibrosis (CF) patients. CF is a rare disease in China, which makes Pandoraea a total stranger to Chinese physicians. Pandoraea genus is reported as an emerging pathogen in CF patients in most cases. However, there are few pieces of evidence that confirm Pandoraea can be more virulent in non-CF patients. The pathogenicity of Pandoraea genus is poorly understood, as well as its treatment. The incidence of Pandoraea induced infection in non-CF patients may be underestimated and it’s important to identify and understand these organisms. Case presentation: We report a 44-years-old man who suffered from pneumonia and died eventually. Before his condition deteriorated, a Gram-negative bacilli was cultured from his sputum and identified as Pandoraea Apista by matrix-assisted laser desorption ionization–time-of-flight mass spectrometry (MALDI-TOF MS). Conclusion: Pandoraea spp. is an emerging opportunistic pathogen. The incidences of Pandoraea related infection in non-CF patients may be underestimated due to the difficulty of identification. All strains of Pandoraea show multi-drug resistance and highly variable susceptibility. To better treatment, species-level identification and antibiotic susceptibility test are necessary. Keywords: Pandoraea Apista, Brain trauma, Pneumonia, Pathogenicity, Susceptibility Background of antibiotics, which makes the treatment of Pandoraea Pandoraea species were first described by Coenye et al. related infections more complicated. Pandoraea is rarely in 2000 [1], which had been isolated from both environ- found in non-CF patients, due to different lung environ- mental and human clinical samples, mostly from cystic ments and misidentification. We report a case of pneumo- fibrosis (CF) patients. They may contribute to the lung nia caused by Pandoraea Apista after the evacuation of function decline in CF patients. Some of these organisms traumatic intracranial hematomas and review the available are capable of causing bacteremia in both CF and non-CF literature concerning Pandoraea species to a better patients. And yet, with limited evidence presented, the understanding. pathogenicity of Pandoraea remains poorly understood. Besides, it is difficult to differentiate Pandoraea species from some other species, such as Burkholderia or Ralsto- Case presentation nia [2]. Furthermore, these bacteria are resistant to a lot A 44-year-old man was transferred to the emergency in- tensive care unit (EICU) of The First Affiliated Hospital of Zhejiang University, Hangzhou, China, on November * Correspondence: [email protected] 25, 2018, due to multiple injuries and coma after a brain 2Department of Pharmacy, The First Affiliated Hospital of Medicine School, Zhejiang University, Hangzhou, China injury. Five days earlier, he accidentally fell from a height Full list of author information is available at the end of the article of about 7 m and immediately fell into a coma. Removal © The Author(s). 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. Lin et al. BMC Infectious Diseases (2019) 19:869 Page 2 of 9 of traumatic intracranial hematoma and decompressive hsCRP was 194.4 mg/L. CT scan (Fig. 2) confirmed new craniectomy were performed on November 20, 2018, infections in his right lung. The sputum culture result was and November 24, 2018. And antimicrobial treatment reconsidered, and the microbiologist of our hospital con- had been given before he was admitted to our hospital. firmed that Pandoraea Apista was the only germ grow in On the day of admission, physical examination showed the media. After a review of some case report concerning a low-grade fever of 37.6 °C, a blood pressure of 165/79 Pandoraea species, meropenem was altered by imipenem mmHg and a Glasgow Coma Score of 1 + T + 1. Labora- (1 g IV, 6 hourly) on day 12. Nonetheless, his condition tory examination detected an elevated white blood cell got worse and the relatives of him asked for a “Do Not At- count (17.1 × 10E9/L with 90.6% neutrophils) and hyper- tempt Resuscitation”. He died on day 14 with cardiac re- sensitive C-reactive protein (hsCRP) of 209.70 mg/L. spiratory arrest and multiple organ failure. Procalcitonin (PCT) was 0.38 ng/ml in the meantime. With tracheal intubation and ventilator-assisted ventila- Discussion and conclusion tion were given, blood gas values were as follows: pO2, The timeline of our case-patient is summarized in Table 1. 117 mmHg; pCO2, 31.4 mmHg. After two sets of blood Pandoraea species is a strange genus to both clinicians culture were taken, an antibiotic regimen included mer- and microbiologists in China. It is reasonable to believe openem (2 g IV, 8 hourly) and vancomycin (1million IU that Pandoraea apista might not the responsible pathogen IV 12 hourly) was given. A lung computed tomography at the time of admission. But the using of broad-spectrum (CT) scan was performed on day 3 (Fig. 1) and found antibiotics promoted the growth of Pandoraea apista, patchy consolidation in left inferior lobar. It was consid- which lead to the right pneumonia and a worsening con- ered as traumatic wet lung and/or lung infection. On dition of this patient. To better understand Pandoraea day 7, blood culture showed no bacteria growth, the species and its pathogenicity, we present a review from lit- hsCRP decreased to 6.7 mg/L, PCT was 0.12 ng/ml, but erature reported before November 31, 2018. the white blood cells were still elevated (12.3 × 10E9/L with 89.5% neutrophils). A large amount of Gram- Microbiology, distribution, and identification negative rod from the sputum specimen taken at day 5, Pandoraea species belongs to the β-subclass of the Pro- which identified as Pandoraea Apista by MALDI-TOF teobacteria, which contains a group of Gram-negative MS, was reported at day 8, with no antimicrobial suscep- bacilli that are aerobic or facultative anaerobic (e.g. P. tibility test results. The antibiotic regimen remained un- pnomenusa reported by Ambrose et al. [3]), do not form changed because of lack of knowledge about this genus spores, do not reduce nitrate, do not ferment lactose, and and the infection of this patient seemed to be getting rely on flagellar movement. Growth is observed at 30 °C better. However, hsCRP and PCT increased progressively and 37 °C. Catalase activity is variable [4], along with lack after that. It became more and more difficult to maintain of saccharolytic activity, and mostly are o-nitrophenyl-β- his blood pressure and oxygen saturation. On day 11, the D-galactopyranoside (ONPG) negative [1, 2]. Fig. 1 Lung CT scan on November 27, 2018. Lung CT taken on day 3 shows patchy consolidation in left inferior lobar Lin et al. BMC Infectious Diseases (2019) 19:869 Page 3 of 9 Fig. 2 Lung CT scan on January 4, 2019. Lung CT taken on day 11 shows patchy consolidation in both lungs It presently comprises five species that have been iso- acid analysis may be useful [1, 2], and yet cellular fatty lated from human clinical specimens (P. apista, P. pulmo- acid-deficient isolate has been reported [15]. Genus- nicola, P. pnomenusa, P. sputorum, and P. norimbergensis) specific PCR assays and the sequences of 16S rRNA [1, 32] [1], five named non-clinical species (P. thiooxydans [5],P. and gyrB [33] genes have proven to be reliable but may oxalativorans [6], P. faecigallinarum [6],P.vervacti[6], have some limitation in differentiating the Pandoraea spe- and P. terrae [4]) that have been isolated only from non- cies [15, 29]. More recently, several studies have reported clinical origin and at least four unnamed genomospecies good results in using MALDI-TOF MS for the identifica- [1, 7]. The main sources of Pandoraea species in the envir- tion of Pandoraea species [16–18, 20]. MALDI-TOF MS onment including soil, animal feces, water, and even pow- is a quick, easy and practical, high throughput analytic dered milk [8]. The clinical species were mainly isolated method that relies on a comparison between the mass from respiratory specimens of cystic fibrosis (CF) patients spectrum of the isolate and the mass spectra in available [1, 3, 7, 9–24]. To date, cases of Pandoraea species caused databases. But Pandoraea species are rare in clinical iso- colonization or infection have been reported all over the lates. With less information contributed by Pandoraea world, including USA [1, 7, 12, 25], Denmark [1, 10, 26], species in the database used might limit the discriminatory Germany [13], France [18, 19], Ireland [26], Argentina [20, power of this method. Misidentification in strains-level 24], Spain [16, 17, 27, 28], Australia [3, 14, 15], Canada [1], has been reported [3]. MALDI-TOF MS is a promising UK [1, 9, 22], China [29], Belgium [1], Brazil [1], Sweden [1] approach, but more specific information is needed to up- (See at Fig. 3). Most cases occurred in Europe, America, date its database for accurate confirmation of bacteria that and Australia, which was consistent with the epidemiology is less common.
Recommended publications
  • Comparative Genomics of Pandoraea, a Genus Enriched in Xenobiotic Biodegradation and Metabolism
    fmicb-10-02556 November 4, 2019 Time: 15:40 # 1 ORIGINAL RESEARCH published: 06 November 2019 doi: 10.3389/fmicb.2019.02556 Comparative Genomics of Pandoraea, a Genus Enriched in Xenobiotic Biodegradation and Metabolism Charlotte Peeters1, Evelien De Canck1, Margo Cnockaert1, Evie De Brandt1, Cindy Snauwaert2, Bart Verheyde1, Eliza Depoorter1, Theodore Spilker3, John J. LiPuma3 and Peter Vandamme1,2* 1 Laboratory of Microbiology, Department of Biochemistry and Microbiology, Faculty of Sciences, Ghent University, Ghent, Belgium, 2 BCCM/LMG Bacteria Collection, Department of Biochemistry and Microbiology, Faculty of Sciences, Ghent Edited by: University, Ghent, Belgium, 3 Department of Pediatrics, University of Michigan Medical School, Ann Arbor, MI, United States Iain Sutcliffe, Northumbria University, United Kingdom Comparative analysis of partial gyrB, recA, and gltB gene sequences of 84 Pandoraea Reviewed by: reference strains and field isolates revealed several clusters that included no taxonomic Martin W. Hahn, reference strains. The gyrB, recA, and gltB phylogenetic trees were used to select 27 University of Innsbruck, Austria Stephanus Nicolaas Venter, strains for whole-genome sequence analysis and for a comparative genomics study that University of Pretoria, South Africa also included 41 publicly available Pandoraea genome sequences. The phylogenomic Aharon Oren, The Hebrew University of Jerusalem, analyses included a Genome BLAST Distance Phylogeny approach to calculate pairwise Israel digital DNA–DNA hybridization values and their
    [Show full text]
  • Genomic and Proteomic Analysis of Lignin Degrading and Polyhydroxyalkanoate Accumulating Β‑Proteobacterium Pandoraea Sp
    Kumar et al. Biotechnol Biofuels (2018) 11:154 https://doi.org/10.1186/s13068-018-1148-2 Biotechnology for Biofuels RESEARCH Open Access Genomic and proteomic analysis of lignin degrading and polyhydroxyalkanoate accumulating β‑proteobacterium Pandoraea sp. ISTKB Madan Kumar1, Sandhya Verma2, Rajesh Kumar Gazara2, Manish Kumar1, Ashok Pandey3, Praveen Kumar Verma2* and Indu Shekhar Thakur1* Abstract Background: Lignin is a major component of plant biomass and is recalcitrant to degradation due to its complex and heterogeneous aromatic structure. The biomass-based research mainly focuses on polysaccharides component of biomass and lignin is discarded as waste with very limited usage. The sustainability and success of plant polysac- charide-based biorefnery can be possible if lignin is utilized in improved ways and with minimal waste generation. Discovering new microbial strains and understanding their enzyme system for lignin degradation are necessary for its conversion into fuel and chemicals. The Pandoraea sp. ISTKB was previously characterized for lignin degradation and successfully applied for pretreatment of sugarcane bagasse and polyhydroxyalkanoate (PHA) production. In this study, genomic analysis and proteomics on aromatic polymer kraft lignin and vanillic acid are performed to fnd the impor- tant enzymes for polymer utilization. Results: Genomic analysis of Pandoraea sp. ISTKB revealed the presence of strong lignin degradation machinery and identifed various candidate genes responsible for lignin degradation and PHA production.
    [Show full text]
  • Host–Symbiont Specificity Determined by Microbe–Microbe Competition in an Insect
    Host–symbiont specificity determined by microbe– microbe competition in an insect gut Hideomi Itoha,1, Seonghan Jangb,1, Kazutaka Takeshitac, Tsubasa Ohbayashid, Naomi Ohnishie,2, Xian-Ying Mengf, Yasuo Mitania, and Yoshitomo Kikuchia,b,g,3 aBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology, Hokkaido Center, 062-8517 Sapporo, Japan; bGraduate School of Agriculture, Hokkaido University, 060-8589 Sapporo, Japan; cFaculty of Bioresource Sciences, Akita Prefectural University, 010-0195 Akita, Japan; dInstitute for Integrative Biology of the Cell, UMR 9198, CNRS, Commissariat à l’Energie Atomique et aux Énergies Alternatives (CEA), Université Paris-Sud, 91198 Gif-sur-Yvette, France; eResearch Center for Zoonosis Control, Hokkaido University, 001-0020 Sapporo, Japan; fBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba Center, 305-8566 Tsukuba, Japan; and gComputational Bio Big Data Open Innovation Laboratory, National Institute of Advanced Industrial Science and Technology, 062-8517 Sapporo, Japan Edited by Joan E. Strassmann, Washington University in St. Louis, St. Louis, MO, and approved September 30, 2019 (received for review July 18, 2019) Despite the omnipresence of specific host–symbiont associations microbe competition on the evolution and stabilization of host– with acquisition of the microbial symbiont from the environment, symbiont specificity is very scarce. little is known about how the specificity of the interaction evolved The bean bug Riptortus pedestris (Heteroptera: Alydidae) is and is maintained. The bean bug Riptortus pedestris acquires a associated with a Burkholderia symbiont that is confined in specific bacterial symbiont of the genus Burkholderia from environ- symbiosis-specific crypts located in the posterior midgut region Burkholderia mental soil and harbors it in midgut crypts.
    [Show full text]
  • P1761 Paper Poster Session Microbial Pathogenesis and Virulence
    P1761 Paper Poster Session Microbial pathogenesis and virulence The Burkholderia contaminans operon participates in switching on the biofilm formation Olga Voronina1, Marina Kunda*1, Natalia Ruzhova1, Andrey Semenov1, Yulia Romanova1 1N.F. Gamaleya Research Center for Epidemiology and Microbiology, Ministry of Health of Russia, Moscow, Russian Federation Background: Burkholderia cepacia complex (Bcc) bacteria - opportunistic pathogens causing nosocomial infections, are especially dangerous for cystic fibrosis patients. Biofilm formation (BF) helps Bcc to escape the antimicrobial agents’ effect and complicates the Bcc eradication. The two component signal (TCS) transduction systems are in charge of the BF. The purpose of our investigation was the most important TCS determination. Material/methods: High biofilm producer (HBP) clinical strain B. contaminans GIMC4509:Bct370 and lacking biofilm production (LBP) B. contaminans strain GIMC4587:Bct370-19 were used. Last one was obtained Romanova et al. by insertion modification of clinical strain with plasposon pTnMod-RKm. The strains were analyzed by Whole-genome sequencing and Liquid Chromatography Mass Spectrometry (LC-MC). 454 Sequencing System Software V 2.7 (Roche), RAST, BioCyc Database Collection, InterPro, MaxQuant were used for genome assembling, annotation, operons prediction, proteins’ domains detection and proteins after MC identification. Operons sequences were deposited in GenBank under the accession numbers KP288491, KP288492. Results: There are 37 two component transcriptional regulators (TCTR) genes in B. contaminans or B. lata genomes. Most of them are located with sensor signal transduction histidine kinase genes in operon one after the other. We found out four components operon, in which gene of peptidoglycan binding protein with FecR domain was embedded between the TCTR and kinase genes.
    [Show full text]
  • Quorum Sensing Activity in Pandoraea Pnomenusa RB38
    Sensors 2014, 14, 10177-10186; doi:10.3390/s140610177 OPEN ACCESS sensors ISSN 1424-8220 www.mdpi.com/journal/sensors Article Quorum Sensing Activity in Pandoraea pnomenusa RB38 Robson Ee, Yan-Lue Lim, Lin-Xin Kin, Wai-Fong Yin and Kok-Gan Chan * Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur 50603, Malaysia; E-Mails: [email protected] (R.E.); [email protected] (Y.-L.L.); [email protected] (L.-X.K.); [email protected] (W.-F.Y.) * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +60-37967-5162; Fax: +60-37967-4509. Received: 5 March 2014; in revised form: 25 May 2014 / Accepted: 28 May 2014 / Published: 10 June 2014 Abstract: Strain RB38 was recovered from a former dumping area in Malaysia. MALDI-TOF mass spectrometry and genomic analysis identified strain RB-38 as Pandoraea pnomenusa. Various biosensors confirmed its quorum sensing properties. High resolution triple quadrupole liquid chromatography–mass spectrometry analysis was subsequently used to characterize the N-acyl homoserine lactone production profile of P. pnomenusa strain RB38, which validated that this isolate produced N-octanoyl homoserine lactone as a quorum sensing molecule. This is the first report of the production of N-octanoyl homoserine lactone by P. pnomenusa strain RB38. Keywords: matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF); mass spectrometry (MS); cell-to cell communication; triple quodruopole liquid chromatography mass spectrometry (LC-MS/MS); N-octanoyl homoserine lactone (C8-HSL) 1. Introduction Pandoraea is a Gram-negative rod shape proteobacteria of the Burkholderiaceae family that is often isolated from sputa of cystic fibrosis patients and soil [1].
    [Show full text]
  • Virulence of an Emerging Respiratory Pathogen, Genus Pandoraea, in Vivo and Its Interactions with Lung Epithelial Cells
    Technological University Dublin ARROW@TU Dublin Articles School of Science and Computing 2010-11 Virulence of an Emerging Respiratory Pathogen, Genus Pandoraea, In Vivo and its Interactions with Lung Epithelial Cells Gillian Herbert Institute of Technology Tallaght Anne Costello Technological University Dublin, [email protected] Lydia Fabunmi Technological University Dublin, [email protected] See next page for additional authors Follow this and additional works at: https://arrow.tudublin.ie/ittsciart Part of the Biochemistry Commons, Cell Biology Commons, Microbiology Commons, and the Molecular Biology Commons Recommended Citation Herbert, G., Costello, A., Fabunmi, L., Schaffer, K., Caraher, E., Callaghan, M. and McClean, M. Virulence of an emerging respiratory pathogen, genus Pandoraea, in vivo and its interactions with lung epithelial cells. Letters in Applied Microbiology 02/2010; 50(5):500- DOI 10.1099/jmm.0.022657-0 This Article is brought to you for free and open access by the School of Science and Computing at ARROW@TU Dublin. It has been accepted for inclusion in Articles by an authorized administrator of ARROW@TU Dublin. For more information, please contact [email protected], [email protected]. This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 4.0 License Funder: PRTLI Cycle 4 & PRDSP1 Authors Gillian Herbert, Anne Costello, Lydia Fabunmi, Kirsten Schaffer, Kevin Kavanagh, Emma M. Caraher, Máire Callaghan, and Siobhan McClean This article is available at ARROW@TU Dublin: https://arrow.tudublin.ie/ittsciart/26 1 Pathogenicity and Virulence 2 Virulence of emerging respiratory pathogen, genus Pandoraea, in vivo 3 and its interactions with lung epithelial cells.
    [Show full text]
  • Genome of Ca. Pandoraea Novymonadis, an Endosymbiotic Bacterium of the Trypanosomatid Novymonas Esmeraldas
    fmicb-08-01940 September 30, 2017 Time: 16:0 # 1 ORIGINAL RESEARCH published: 04 October 2017 doi: 10.3389/fmicb.2017.01940 Genome of Ca. Pandoraea novymonadis, an Endosymbiotic Bacterium of the Trypanosomatid Novymonas esmeraldas Alexei Y. Kostygov1,2†, Anzhelika Butenko1,3†, Anna Nenarokova3,4, Daria Tashyreva3, Pavel Flegontov1,3,5, Julius Lukeš3,4 and Vyacheslav Yurchenko1,3,6* 1 Life Science Research Centre, Faculty of Science, University of Ostrava, Ostrava, Czechia, 2 Zoological Institute of the Russian Academy of Sciences, St. Petersburg, Russia, 3 Biology Centre, Institute of Parasitology, Czech Academy of Sciences, Ceskéˇ Budejovice,ˇ Czechia, 4 Faculty of Sciences, University of South Bohemia, Ceskéˇ Budejovice,ˇ Czechia, 5 Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia, 6 Institute of Environmental Technologies, Faculty of Science, University of Ostrava, Ostrava, Czechia We have sequenced, annotated, and analyzed the genome of Ca. Pandoraea novymonadis, a recently described bacterial endosymbiont of the trypanosomatid Novymonas esmeraldas. When compared with genomes of its free-living relatives, it Edited by: has all the hallmarks of the endosymbionts’ genomes, such as significantly reduced João Marcelo Pereira Alves, University of São Paulo, Brazil size, extensive gene loss, low GC content, numerous gene rearrangements, and Reviewed by: low codon usage bias. In addition, Ca. P. novymonadis lacks mobile elements, Zhao-Rong Lun, has a strikingly low number of pseudogenes, and almost all genes are single Sun Yat-sen University, China Vera Tai, copied. This suggests that it already passed the intensive period of host adaptation, University of Western Ontario, Canada which still can be observed in the genome of Polynucleobacter necessarius, a *Correspondence: certainly recent endosymbiont.
    [Show full text]
  • Pandoraea Apista Bacteremia in a COVID-Positive Man: a Rare Coinfection Case Report from North India
    Published online: 2021-06-28 THIEME 192 Case Pandoraea Report apistain a COVID Patient Singh et al. Pandoraea apista Bacteremia in a COVID-Positive Man: A Rare Coinfection Case Report from North India Sweta Singh1 Chinmoy Sahu1 , Sangram Singh Patel1 Atul Garg1 Ujjala Ghoshal1 1Department of Microbiology, Sanjay Gandhi Post Graduate Address for correspondence Chinmoy Sahu, MD (Microbiology) Institute of Medical Sciences, Lucknow, Uttar Pradesh, India Department of Microbiology, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Raebareli Road, Lucknow, Uttar Pradesh 226014, India (e-mail: [email protected]). J Lab Physicians 2021;13:192–194. Abstract Pandoraea apista is a novel gram-negative bacillus usually isolated from respiratory specimens of cystic fibrosis patients. Few cases of bacteremia have also been reported due to this rare pathogen. Emergence of multidrug-resistant isolates of this bacillus is of grave concern. Here, we report a very interesting and unusual case of Pandoraea Keywords apista bacteremia in a coronavirus disease (COVID)–positive elderly diabetic man suf- ► Pandoraea apista fering from pneumonia. Prompt isolation and antibiotic sensitivity testing guided the ► bacillus patient’s treatment and yielded favorable outcome. The need of automated methods ► cystic fibrosis for identification and sensitivity testing limits the reporting of this rare but important ► bacteremia pathogen in hospital settings. Detailed research work and studies are needed in this ► COVID direction to better understand this pathogen and its clinical manifestations for better ► pneumonia patient outcome. Introduction report a case of bacteremia caused by Pandoraea apista in a COVID-positive elderly man suffering from pneumonia. Pandoraea species is a newly emerging multidrug-resistant pathogen usually isolated from cystic fibrosis (CF) patients.
    [Show full text]
  • Epidemic Spread of Pandoraea Pulmonicola in a Cystic Fibrosis Center
    Degand et al. BMC Infectious Diseases (2015) 15:583 DOI 10.1186/s12879-015-1327-8 RESEARCH ARTICLE Open Access Epidemic spread of Pandoraea pulmonicola in a cystic fibrosis center Nicolas Degand1†, Romain Lotte1,2,3*†, Célia Decondé Le Butor1, Christine Segonds4, Michelle Thouverez5, Agnès Ferroni6, Christine Vallier7, Laurent Mély7 and Jacqueline Carrère8 Abstract Background: Pandoraea spp. are recently discovered bacteria, mainly recovered from cystic fibrosis (CF) patients, but their epidemiology and clinical significance are not well known. We describe an epidemic spread of Pandoraea pulmonicola from 2009 in our CF center, involving 6 out of 243 CF patients. Methods: Bacterial identification used amplified ribosomal DNA restriction analysis (ARDRA), MALDI-TOF mass spectrometry (MALDI-TOF MS) and 16S rDNA gene sequencing. The clonal link between strains was assessed with pulsed field gel electrophoresis (PFGE) using XbaI. Clinical data were gathered for all patients. Results: The index case was chronically colonized since 2000. The main hypothesis for this bacterial spread was a droplet cross-transmission, due to preventive measures not being strictly followed. Antibiotic susceptibility testing revealed resistance to beta-lactams, ciprofloxacin and colistin. However, there was susceptibility to trimethoprim-sulfamethoxazole. All patients were chronically colonized with Pseudomonas aeruginosa, and the acquisition of P. pulmonicola resulted in chronic colonization in all patients. Three patients died, and two patients remained clinically stable, whereas one patient had a decline in lung function. Conclusions: This study, which is the first to describe an epidemic spread of P. pulmonicola, notes the potential transmissibility of this bacterial species and the need for infection control measures. Keywords: Pandoraea pulmonicola, Epidemic, Cystic fibrosis Background soil, sea, and drinking water [5, 6].
    [Show full text]
  • Virulence of an Emerging Respiratory Pathogen, Genus Pandoraea, in Vivo and Its Interactions with Lung Epithelial Cells
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by MURAL - Maynooth University Research Archive Library Journal of Medical Microbiology (2011), 60, 289–299 DOI 10.1099/jmm.0.022657-0 Virulence of an emerging respiratory pathogen, genus Pandoraea, in vivo and its interactions with lung epithelial cells Anne Costello,1,2 Gillian Herbert,1 Lydia Fabunmi,1 Kirsten Schaffer,3 Kevin A. Kavanagh,4 Emma M. Caraher,1,2 Ma´ire Callaghan1,2 and Siobha´n McClean1,2 Correspondence 1Centre of Microbial Host Interactions, ITT Dublin, Tallaght, Dublin 24, Ireland Siobha´n McClean 2Centre of Applied Science for Health, ITT Dublin, Tallaght, Dublin 24, Ireland [email protected] 3Department of Microbiology, St Vincent’s University Hospital, Elm Park, Dublin, Ireland 4Department of Biology, National University of Ireland, Maynooth, Co. Kildare, Ireland Pandoraea species have emerged as opportunistic pathogens among cystic fibrosis (CF) and non-CF patients. Pandoraea pulmonicola is the predominant Pandoraea species among Irish CF patients. The objective of this study was to investigate the pathogenicity and potential mechanisms of virulence of Irish P. pulmonicola isolates and strains from other Pandoraea species. Three patients from whom the P. pulmonicola isolates were isolated have since died. The in vivo virulence of these and other Pandoraea strains was examined by determining the ability to kill Galleria mellonella larvae. The P. pulmonicola strains generally were the most virulent of the species tested, with three showing a comparable or greater level of virulence in vivo relative to another CF pathogen, Burkholderia cenocepacia, whilst strains from two other species, Pandoraea apista and Pandoraea pnomenusa, were considerably less virulent.
    [Show full text]
  • Identification of Pseudomonas Species and Other Non-Glucose Fermenters
    UK Standards for Microbiology Investigations Identification of Pseudomonas species and other Non- Glucose Fermenters Issued by the Standards Unit, Microbiology Services, PHE Bacteriology – Identification | ID 17 | Issue no: 3 | Issue date: 13.04.15 | Page: 1 of 41 © Crown copyright 2015 Identification of Pseudomonas species and other Non-Glucose Fermenters Acknowledgments UK Standards for Microbiology Investigations (SMIs) are developed under the auspices of Public Health England (PHE) working in partnership with the National Health Service (NHS), Public Health Wales and with the professional organisations whose logos are displayed below and listed on the website https://www.gov.uk/uk- standards-for-microbiology-investigations-smi-quality-and-consistency-in-clinical- laboratories. SMIs are developed, reviewed and revised by various working groups which are overseen by a steering committee (see https://www.gov.uk/government/groups/standards-for-microbiology-investigations- steering-committee). The contributions of many individuals in clinical, specialist and reference laboratories who have provided information and comments during the development of this document are acknowledged. We are grateful to the Medical Editors for editing the medical content. For further information please contact us at: Standards Unit Microbiology Services Public Health England 61 Colindale Avenue London NW9 5EQ E-mail: [email protected] Website: https://www.gov.uk/uk-standards-for-microbiology-investigations-smi-quality- and-consistency-in-clinical-laboratories
    [Show full text]
  • Endosymbiont Capture, a Repeated Process of Endosymbiont Transfer with Replacement in Trypanosomatids Angomonas Spp
    pathogens Article Endosymbiont Capture, a Repeated Process of Endosymbiont Transfer with Replacement in Trypanosomatids Angomonas spp. Tomáš Skalický 1,† , João M. P. Alves 2,† , Anderson C. Morais 2, Jana Režnarová 3, Anzhelika Butenko 1,3, Julius Lukeš 1,4 , Myrna G. Serrano 5, Gregory A. Buck 5, Marta M. G. Teixeira 2, Erney P. Camargo 2, Mandy Sanders 6, James A. Cotton 6 , Vyacheslav Yurchenko 3,7 and Alexei Y. Kostygov 3,8,* 1 Institute of Parasitology, Biology Centre, Czech Academy of Sciences, 370 05 Ceskˇ é Budˇejovice(Budweis), Czech Republic; [email protected] (T.S.); [email protected] (A.B.); [email protected] (J.L.) 2 Department of Parasitology, Institute of Biomedical Sciences, University of São Paulo, São Paulo 05508-000, Brazil; [email protected] (J.M.P.A.); [email protected] (A.C.M.); [email protected] (M.M.G.T.); [email protected] (E.P.C.) 3 Life Science Research Centre, Faculty of Science, University of Ostrava, 710 00 Ostrava, Czech Republic; [email protected] (J.R.); [email protected] (V.Y.) 4 Faculty of Sciences, University of South Bohemia, 370 05 Ceskˇ é Budˇejovice(Budweis), Czech Republic 5 Department of Microbiology and Immunology, Virginia Commonwealth University, Richmond, VA 23298-0678, USA; [email protected] (M.G.S.); [email protected] (G.A.B.) 6 Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SA, UK; [email protected] (M.S.); [email protected] (J.A.C.) 7 Martsinovsky Institute of Medical Parasitology, Sechenov University, 119435 Moscow, Russia Citation: Skalický, T.; Alves, J.M.P.; 8 Zoological Institute of the Russian Academy of Sciences, 199034 St.
    [Show full text]