Bio 209 Course Title: Chordates
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Morocco SD 2017 Trip Report
Morocco 9th - 18th March 2017 Desert Sparrow is surely one of the best looking and most sought after of all the sparrows Tour Leader: Lisle Gwynn All photos in this report were taken by Lisle Gwynn on this tour Species depicted in photographs are named in BOLD RED www.tropicalbirding.com +1-409-515-9110 [email protected] Introduction Morocco is a fascinating destination, and one that many world birders have neglected for too long. It is increasingly becoming a go-to country for European birders in Spring, and offers some of the most exciting birding in the Western Palearctic biogeographic region. Not only does it offer a chance to see Afro-European migration at its peak, but it also offers a plethora of exciting and special endemic and near-endemic species at its core. Add to this the fact that throughout the tour we have excellent accommodation and some of the best food available anywhere in the world (in my opinion), it all goes toward making Morocco a must-visit location for any birder branching out into the world. It is also currently by far the safest North African country to visit, with little crime and none of the problems that plague the rest of the region, and therefore presents a comfortable and safe opportunity to experience North Africa. This year’s tour followed our tried and tested route, starting in the manic city of Marrakesh at a serene hotel amongst the craziness, a quick departure to the idyllic Ourika Valley and the high snow-capped peaks of Oukameiden and the high Atlas Mountains, before descending to the stony desert around Boumalne Dades and the ochre-cast dunes of the Sahara at Erg Chebbi. -
500 Natural Sciences and Mathematics
500 500 Natural sciences and mathematics Natural sciences: sciences that deal with matter and energy, or with objects and processes observable in nature Class here interdisciplinary works on natural and applied sciences Class natural history in 508. Class scientific principles of a subject with the subject, plus notation 01 from Table 1, e.g., scientific principles of photography 770.1 For government policy on science, see 338.9; for applied sciences, see 600 See Manual at 231.7 vs. 213, 500, 576.8; also at 338.9 vs. 352.7, 500; also at 500 vs. 001 SUMMARY 500.2–.8 [Physical sciences, space sciences, groups of people] 501–509 Standard subdivisions and natural history 510 Mathematics 520 Astronomy and allied sciences 530 Physics 540 Chemistry and allied sciences 550 Earth sciences 560 Paleontology 570 Biology 580 Plants 590 Animals .2 Physical sciences For astronomy and allied sciences, see 520; for physics, see 530; for chemistry and allied sciences, see 540; for earth sciences, see 550 .5 Space sciences For astronomy, see 520; for earth sciences in other worlds, see 550. For space sciences aspects of a specific subject, see the subject, plus notation 091 from Table 1, e.g., chemical reactions in space 541.390919 See Manual at 520 vs. 500.5, 523.1, 530.1, 919.9 .8 Groups of people Add to base number 500.8 the numbers following —08 in notation 081–089 from Table 1, e.g., women in science 500.82 501 Philosophy and theory Class scientific method as a general research technique in 001.4; class scientific method applied in the natural sciences in 507.2 502 Miscellany 577 502 Dewey Decimal Classification 502 .8 Auxiliary techniques and procedures; apparatus, equipment, materials Including microscopy; microscopes; interdisciplinary works on microscopy Class stereology with compound microscopes, stereology with electron microscopes in 502; class interdisciplinary works on photomicrography in 778.3 For manufacture of microscopes, see 681. -
Australian Diurnal Raptors and Airports
Australian diurnal raptors and airports Photo: John Barkla, BirdLife Australia William Steele Australasian Raptor Association BirdLife Australia Australian Aviation Wildlife Hazard Group Forum Brisbane, 25 July 2013 So what is a raptor? Small to very large birds of prey. Diurnal, predatory or scavenging birds. Sharp, hooked bills and large powerful feet with talons. Order Falconiformes: 27 species on Australian list. Family Falconidae – falcons/ kestrels Family Accipitridae – eagles, hawks, kites, osprey Falcons and kestrels Brown Falcon Black Falcon Grey Falcon Nankeen Kestrel Australian Hobby Peregrine Falcon Falcons and Kestrels – conservation status Common Name EPBC Qld WA SA FFG Vic NSW Tas NT Nankeen Kestrel Brown Falcon Australian Hobby Grey Falcon NT RA Listed CR VUL VUL Black Falcon EN Peregrine Falcon RA Hawks and eagles ‐ Osprey Osprey Hawks and eagles – Endemic hawks Red Goshawk female Hawks and eagles – Sparrowhawks/ goshawks Brown Goshawk Photo: Rik Brown Hawks and eagles – Elanus kites Black‐shouldered Kite Letter‐winged Kite ~ 300 g Hover hunters Rodent specialists LWK can be crepuscular Hawks and eagles ‐ eagles Photo: Herald Sun. Hawks and eagles ‐ eagles Large ‐ • Wedge‐tailed Eagle (~ 4 kg) • Little Eagle (< 1 kg) • White‐bellied Sea‐Eagle (< 4 kg) • Gurney’s Eagle Scavengers of carrion, in addition to hunters Fortunately, mostly solitary although some multiple strikes on aircraft Hawks and eagles –large kites Black Kite Whistling Kite Brahminy Kite Frequently scavenge Large at ~ 600 to 800 g BK and WK flock and so high risk to aircraft Photo: Jill Holdsworth Identification Beruldsen, G (1995) Raptor Identification. Privately published by author, Kenmore Hills, Queensland, pp. 18‐19, 26‐27, 36‐37. -
Vertebrates, Overview
VERTEBRATES, OVERVIEW Carl Gans* and Christopher J. Bell† *Department of Integrative Biology, University of Texas at Austin and †Department of Geological Sciences, University of Texas at Austin I. Introduction neurectoderm An embryonic tissue that gives rise to II. General Vertebrate Characteristics the central tube of the nervous system. III. Early Chordate and Vertebrate History notochord A stiff, flexible, longitudinal rod running IV. Vertebrate Classification along the middorsal portion of the chordate body. V. Definitions and Diagnoses of Major Chordate It is situated dorsal to the coelom and ventral to the Groups central tube of the nervous system. pharynx The anterior portion of the alimentary canal, characterized by lateral buds that provide skeletal GLOSSARY support for the gill region. tuberculum interglenoideum An anterior projection of chordate A member of the group Chordata. The the first (cervical) vertebra in salamanders. The tu- Chordata includes the most recent common ancestor berculum interglenoideum bears articular facets that of tunicates and cephalochordates and all of that insert into the foramen magnum of the skull and ancestor’s descendants. Tunicates, lancelets, hag- provide additional articulation points between the fishes, and vertebrates are all chordates. skull and the vertebral column. ectoderm An embryonic tissue that provides the future outside layer of the animal. ectothermy A method of body temperature control in which the animal utilizes external sources for gaining VERTEBRATES INCLUDE ALL the fishes, amphibians, and giving up heat, thus achieving temperature con- reptiles, birds, and mammals. These animals are united trol without affecting metabolic rate. in a more inclusive group, the Chordata, that includes endothermy A method of body temperature control in the closest living relatives of vertebrates, the hagfishes, which the animal modifies its metabolic rate to lancelets, and tunicates. -
Cross-Temporal Analysis of Genetic Diversity in the Endangered Medium Tree Finch (Camarhynchus Pauper) and Closely Related Darwin’S Finches
Cross-Temporal Analysis of Genetic Diversity in the Endangered Medium Tree Finch (Camarhynchus pauper) and Closely Related Darwin’s Finches By Colleen Metzger B.S., Juniata College, 2009 A thesis submitted to the Graduate School of the University of Cincinnati Department of Biological Sciences In partial fulfillment of the requirements For the degree of Master of Science Committee Chair: Kenneth Petren, Ph.D. November 2012 Abstract Natural history collections can provide a direct view of past genotypes, which allows greater insight into evolutionary processes that are relevant for conservation and management. However, few studies have used broad surveys of multilocus genotypes from the past to address the wide range of processes that can affect conservation planning of a species today. Therefore, we assessed the history and status of the critically endangered medium tree finch, Camarhynchus pauper, an endemic finch of the Galápagos Islands. Using ancient DNA techniques, we quantified cross-temporal genetic change for 16 microsatellite loci in this species and its relatives. We tested the hypothesis that C. pauper has undergone a recent reduction in population size and loss of genetic diversity, and evaluated the hypothesis that C. pauper is genetically distinct from its two closest relatives, C. parvulus and C. psittacula. We assessed whether decline in C. pauper has led to increased hybridization with other species and evaluated a long-standing hypothesis of its origin from C. psittacula on another island using genetic distances, assignment tests, and migration analyses. Genetic diversity declined significantly in C. pauper over time, and several other tree finch populations showed similar losses of genetic diversity. -
Diversity and Longitudinal Distribution of Freshwater Fish in Klawing River, Central Java, Indonesia
BIODIVERSITAS ISSN: 1412-033X Volume 19, Number 1, January 2018 E-ISSN: 2085-4722 Pages: 85-92 DOI: 10.13057/biodiv/d190114 Diversity and longitudinal distribution of freshwater fish in Klawing River, Central Java, Indonesia SUHESTRI SURYANINGSIH♥, SRI SUKMANINGRUM, SORTA BASAR IDA SIMANJUNTAK, KUSBIYANTO Faculty of Biology, Universitas Jenderal Soedirman. Jl. Dr. Soeparno No. 63, Purwokerto-Banyumas 53122, Central Java, Indonesia. Tel.: +62-281- 638794, Fax.: +62-281-631700, ♥email: [email protected] Manuscript received: 10 July 2017. Revision accepted: 2 December 2017. Abstract. Suryaningsih S, Sukmaningrum S, Simanjuntak SBI, Kusbiyanto. 2018. Diversity and longitudinal distribution of freshwater fish in Klawing River, Central Java, Indonesia. Biodiversitas 19: 85-92. The aims of this study were to evaluate the diversity and longitudinal distribution of fish in Klawing River, Purbalingga (Central Java). The survey was performed using a clustered random- sampling technique. The river was divided into upstream, midstream and downstream regions. Species diversity was measured as the number of species, and the longitudinal distribution was assessed by determining the fish species present in each of the three regions. Eighteen fish species of eleven families were identified in the Klawing River: Cyprinidae, Bagridae, Mastacembelidae, Anabantidae, Cichlidae, Channidae, Eleotrididae, Beleontinidae, Osphronemidae, Poecilidae, and Siluridae. Cyprinidae exhibited the highest number of species (six), followed by Bagridae and Cichlidae (two species each). The other families were represented by one species each. A single cluster analysis showed that the upstream population had a similarity of 78% and 50% with the midstream and downstream populations, respectively. Species and family diversities were higher in the midstream populations than in the upstream and downstream populations. -
Extinction Risk and Conservation of the World's Sharks and Rays
RESEARCH ARTICLE elife.elifesciences.org Extinction risk and conservation of the world’s sharks and rays Nicholas K Dulvy1,2*, Sarah L Fowler3, John A Musick4, Rachel D Cavanagh5, Peter M Kyne6, Lucy R Harrison1,2, John K Carlson7, Lindsay NK Davidson1,2, Sonja V Fordham8, Malcolm P Francis9, Caroline M Pollock10, Colin A Simpfendorfer11,12, George H Burgess13, Kent E Carpenter14,15, Leonard JV Compagno16, David A Ebert17, Claudine Gibson3, Michelle R Heupel18, Suzanne R Livingstone19, Jonnell C Sanciangco14,15, John D Stevens20, Sarah Valenti3, William T White20 1IUCN Species Survival Commission Shark Specialist Group, Department of Biological Sciences, Simon Fraser University, Burnaby, Canada; 2Earth to Ocean Research Group, Department of Biological Sciences, Simon Fraser University, Burnaby, Canada; 3IUCN Species Survival Commission Shark Specialist Group, NatureBureau International, Newbury, United Kingdom; 4Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, United States; 5British Antarctic Survey, Natural Environment Research Council, Cambridge, United Kingdom; 6Research Institute for the Environment and Livelihoods, Charles Darwin University, Darwin, Australia; 7Southeast Fisheries Science Center, NOAA/National Marine Fisheries Service, Panama City, United States; 8Shark Advocates International, The Ocean Foundation, Washington, DC, United States; 9National Institute of Water and Atmospheric Research, Wellington, New Zealand; 10Global Species Programme, International Union for the Conservation -
Snakeheadsnepal Pakistan − (Pisces,India Channidae) PACIFIC OCEAN a Biologicalmyanmar Synopsis Vietnam
Mongolia North Korea Afghan- China South Japan istan Korea Iran SnakeheadsNepal Pakistan − (Pisces,India Channidae) PACIFIC OCEAN A BiologicalMyanmar Synopsis Vietnam and Risk Assessment Philippines Thailand Malaysia INDIAN OCEAN Indonesia Indonesia U.S. Department of the Interior U.S. Geological Survey Circular 1251 SNAKEHEADS (Pisces, Channidae)— A Biological Synopsis and Risk Assessment By Walter R. Courtenay, Jr., and James D. Williams U.S. Geological Survey Circular 1251 U.S. DEPARTMENT OF THE INTERIOR GALE A. NORTON, Secretary U.S. GEOLOGICAL SURVEY CHARLES G. GROAT, Director Use of trade, product, or firm names in this publication is for descriptive purposes only and does not imply endorsement by the U.S. Geological Survey. Copyrighted material reprinted with permission. 2004 For additional information write to: Walter R. Courtenay, Jr. Florida Integrated Science Center U.S. Geological Survey 7920 N.W. 71st Street Gainesville, Florida 32653 For additional copies please contact: U.S. Geological Survey Branch of Information Services Box 25286 Denver, Colorado 80225-0286 Telephone: 1-888-ASK-USGS World Wide Web: http://www.usgs.gov Library of Congress Cataloging-in-Publication Data Walter R. Courtenay, Jr., and James D. Williams Snakeheads (Pisces, Channidae)—A Biological Synopsis and Risk Assessment / by Walter R. Courtenay, Jr., and James D. Williams p. cm. — (U.S. Geological Survey circular ; 1251) Includes bibliographical references. ISBN.0-607-93720 (alk. paper) 1. Snakeheads — Pisces, Channidae— Invasive Species 2. Biological Synopsis and Risk Assessment. Title. II. Series. QL653.N8D64 2004 597.8’09768’89—dc22 CONTENTS Abstract . 1 Introduction . 2 Literature Review and Background Information . 4 Taxonomy and Synonymy . -
Preliminary Checklist of Extant Endemic Species and Subspecies of the Windward Dutch Caribbean (St
Preliminary checklist of extant endemic species and subspecies of the windward Dutch Caribbean (St. Martin, St. Eustatius, Saba and the Saba Bank) Authors: O.G. Bos, P.A.J. Bakker, R.J.H.G. Henkens, J. A. de Freitas, A.O. Debrot Wageningen University & Research rapport C067/18 Preliminary checklist of extant endemic species and subspecies of the windward Dutch Caribbean (St. Martin, St. Eustatius, Saba and the Saba Bank) Authors: O.G. Bos1, P.A.J. Bakker2, R.J.H.G. Henkens3, J. A. de Freitas4, A.O. Debrot1 1. Wageningen Marine Research 2. Naturalis Biodiversity Center 3. Wageningen Environmental Research 4. Carmabi Publication date: 18 October 2018 This research project was carried out by Wageningen Marine Research at the request of and with funding from the Ministry of Agriculture, Nature and Food Quality for the purposes of Policy Support Research Theme ‘Caribbean Netherlands' (project no. BO-43-021.04-012). Wageningen Marine Research Den Helder, October 2018 CONFIDENTIAL no Wageningen Marine Research report C067/18 Bos OG, Bakker PAJ, Henkens RJHG, De Freitas JA, Debrot AO (2018). Preliminary checklist of extant endemic species of St. Martin, St. Eustatius, Saba and Saba Bank. Wageningen, Wageningen Marine Research (University & Research centre), Wageningen Marine Research report C067/18 Keywords: endemic species, Caribbean, Saba, Saint Eustatius, Saint Marten, Saba Bank Cover photo: endemic Anolis schwartzi in de Quill crater, St Eustatius (photo: A.O. Debrot) Date: 18 th of October 2018 Client: Ministry of LNV Attn.: H. Haanstra PO Box 20401 2500 EK The Hague The Netherlands BAS code BO-43-021.04-012 (KD-2018-055) This report can be downloaded for free from https://doi.org/10.18174/460388 Wageningen Marine Research provides no printed copies of reports Wageningen Marine Research is ISO 9001:2008 certified. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences. -
Partridges, Quails, Pheasants and Turkeys Phasianidae Vigors, 1825: Zoological Journal 2: 402 – Type Genus Phasianus Linnaeus, 1758
D .W . .5 / DY a 5D t w[ { wt Ç"" " !W5 í ÇI &'(' / b ù b a L w 5 ! ) " í "* " Ç t+ t " h " * { b ù" t* &)/&0 Order GALLIFORMES: Game Birds and Allies The order of galliform taxa in Checklist Committee (1990) appears to have been based on Peters (1934). Johnsgard (1986) synthesised available data, came up with similar groupings of taxa, and produced a dendrogram indicating that turkeys (Meleagridinae) were the most primitive (outside Cracidae and Megapodiidae), with grouse (Tetraoninae), guineafowl (Numidinae), New World quails (Odontophorinae) and pheasants and kin (Phasianinae) successively more derived. Genetic evidence (DNA-hybridisation data) provided by Sibley & Ahlquist (1990) suggested Odontophorinae were the most basal phasianoids and guineafowl the next most basal group. A basal position of the New World quails among phasianoids has been supported by other genetic data (Kimball et al. 1999, Armstrong et al. 2001). A recent analysis based on morphological characters (Dyke et al. 2003) found support for megapodes as the most basal group in the order, then Cracidae, then Phasianidoidea, and within the latter, Numididae the most basal group. In contrast to the above genetic-based analyses, Dyke et al. (2003) found the Odontophorinae to be the most derived group within the order. A recent analysis using both mitochondrial ND2 and cytochrome-b DNA sequences, however, reinforces the basal position of the Odontophorinae (Pereira & Baker 2006). Here we follow a consensus of the above works and place Odontophorinae basal in the phasianids. Worthy & Holdaway (2002) considered that Cheeseman’s (1891) second-hand record of megapodes from Raoul Island, Kermadec Group, before the 1870 volcanic eruption has veracity. -
ORL 5.1 Hypothetical Spp Final Draft01a.Xlsx
The Ornithological Society of the Middle East, the Caucasus and Central Asia (OSME) The OSME Region List of Bird Taxa, Part E: , Version 5.1: July 2019 In Part E, Hypothetical Taxa, we list non-passerines (prefixed by 'N') first, then passerines (prefixed by 'P'). Such taxa may be from distributions adjacent to or have extended to A fuller explanation is given in Explanation of the ORL, but briefly, Bright green shading of a row (eg Syrian Ostrich) indicates former presence of a taxon in the OSME Region. Light gold shading in column A indicates sequence change from the previous ORL issue. Red font indicates added information since the previous ORL version or the Conservation Threat Status (Critically Endangered = CE, Endangered = E, Vulnerable = V and Data Deficient = DD only). Not all synonyms have been examined. Serial numbers (SN) are merely an administrative convenience and may change. Please do not cite them in any formal correspondence or papers. NB: Compass cardinals (eg N = north, SE = southeast) are used. Rows shaded thus and with yellow text denote summaries of problem taxon groups in which some closely-related taxa may be of indeterminate status or are being studied. Rows shaded thus and with yellow text indicate recent or data-driven major conservation concerns. Rows shaded thus and with white text contain additional explanatory information on problem taxon groups as and when necessary. English names shaded thus are species on BirdLife Tracking Database, http://seabirdtracking.org/mapper/index.php. Only a few individuals from very few colonies are involved. A broad dark orange line, as below, indicates the last taxon in a new or suggested species split, or where sspp are best considered separately.