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Vertebrates, Overview
VERTEBRATES, OVERVIEW Carl Gans* and Christopher J. Bell† *Department of Integrative Biology, University of Texas at Austin and †Department of Geological Sciences, University of Texas at Austin I. Introduction neurectoderm An embryonic tissue that gives rise to II. General Vertebrate Characteristics the central tube of the nervous system. III. Early Chordate and Vertebrate History notochord A stiff, flexible, longitudinal rod running IV. Vertebrate Classification along the middorsal portion of the chordate body. V. Definitions and Diagnoses of Major Chordate It is situated dorsal to the coelom and ventral to the Groups central tube of the nervous system. pharynx The anterior portion of the alimentary canal, characterized by lateral buds that provide skeletal GLOSSARY support for the gill region. tuberculum interglenoideum An anterior projection of chordate A member of the group Chordata. The the first (cervical) vertebra in salamanders. The tu- Chordata includes the most recent common ancestor berculum interglenoideum bears articular facets that of tunicates and cephalochordates and all of that insert into the foramen magnum of the skull and ancestor’s descendants. Tunicates, lancelets, hag- provide additional articulation points between the fishes, and vertebrates are all chordates. skull and the vertebral column. ectoderm An embryonic tissue that provides the future outside layer of the animal. ectothermy A method of body temperature control in which the animal utilizes external sources for gaining VERTEBRATES INCLUDE ALL the fishes, amphibians, and giving up heat, thus achieving temperature con- reptiles, birds, and mammals. These animals are united trol without affecting metabolic rate. in a more inclusive group, the Chordata, that includes endothermy A method of body temperature control in the closest living relatives of vertebrates, the hagfishes, which the animal modifies its metabolic rate to lancelets, and tunicates. -
Supplementary Tales
Metabarcoding reveals different zooplankton communities in northern and southern areas of the North Sea Jan Niklas Macher, Berry B. van der Hoorn, Katja T. C. A. Peijnenburg, Lodewijk van Walraven, Willem Renema Supplementary tables 1-5 Table S1: Sampling stations and recorded abiotic variables recorded during the NICO 10 expedition from the Dutch Coast to the Shetland Islands Sampling site name Coordinates (°N, °E) Mean remperature (°C) Mean salinity (PSU) Depth (m) S74 59.416510, 0.499900 8.2 35.1 134 S37 58.1855556, 0.5016667 8.7 35.1 89 S93 57.36046, 0.57784 7.8 34.8 84 S22 56.5866667, 0.6905556 8.3 34.9 220 S109 56.06489, 1.59652 8.7 35 79 S130 55.62157, 2.38651 7.8 34.8 73 S156 54.88581, 3.69192 8.3 34.6 41 S176 54.41489, 4.04154 9.6 34.6 43 S203 53.76851, 4.76715 11.8 34.5 34 Table S2: Species list and read number per sampling site Class Order Family Genus Species S22 S37 S74 S93 S109 S130 S156 S176 S203 Copepoda Calanoida Acartiidae Acartia Acartia clausi 0 0 0 72 0 170 15 630 3995 Copepoda Calanoida Acartiidae Acartia Acartia tonsa 0 0 0 0 0 0 0 0 23 Hydrozoa Trachymedusae Rhopalonematidae Aglantha Aglantha digitale 0 0 0 0 1870 117 420 629 0 Actinopterygii Trachiniformes Ammodytidae Ammodytes Ammodytes marinus 0 0 0 0 0 263 0 35 0 Copepoda Harpacticoida Miraciidae Amphiascopsis Amphiascopsis cinctus 344 0 0 992 2477 2500 9574 8947 0 Ophiuroidea Amphilepidida Amphiuridae Amphiura Amphiura filiformis 0 0 0 0 219 0 0 1470 63233 Copepoda Calanoida Pontellidae Anomalocera Anomalocera patersoni 0 0 586 0 0 0 0 0 0 Bivalvia Venerida -
Skates and Rays Diversity, Exploration and Conservation – Case-Study of the Thornback Ray, Raja Clavata
UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS DEPARTAMENTO DE BIOLOGIA ANIMAL SKATES AND RAYS DIVERSITY, EXPLORATION AND CONSERVATION – CASE-STUDY OF THE THORNBACK RAY, RAJA CLAVATA Bárbara Marques Serra Pereira Doutoramento em Ciências do Mar 2010 UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS DEPARTAMENTO DE BIOLOGIA ANIMAL SKATES AND RAYS DIVERSITY, EXPLORATION AND CONSERVATION – CASE-STUDY OF THE THORNBACK RAY, RAJA CLAVATA Bárbara Marques Serra Pereira Tese orientada por Professor Auxiliar com Agregação Leonel Serrano Gordo e Investigadora Auxiliar Ivone Figueiredo Doutoramento em Ciências do Mar 2010 The research reported in this thesis was carried out at the Instituto de Investigação das Pescas e do Mar (IPIMAR - INRB), Unidade de Recursos Marinhos e Sustentabilidade. This research was funded by Fundação para a Ciência e a Tecnologia (FCT) through a PhD grant (SFRH/BD/23777/2005) and the research project EU Data Collection/DCR (PNAB). Skates and rays diversity, exploration and conservation | Table of Contents Table of Contents List of Figures ............................................................................................................................. i List of Tables ............................................................................................................................. v List of Abbreviations ............................................................................................................. viii Agradecimentos ........................................................................................................................ -
A Framework of Ichthyofaunal Ecostratigraphy of the Oligocene–Early Miocene Strata of the Polish Outer Carpathian Basin
Annales Societatis Geologorum Poloniae (2006), vol. 76: 1–111. A FRAMEWORK OF ICHTHYOFAUNAL ECOSTRATIGRAPHY OF THE OLIGOCENE–EARLY MIOCENE STRATA OF THE POLISH OUTER CARPATHIAN BASIN Janusz KOTLARCZYK1, Anna JERZMAÑSKA2, Ewa ŒWIDNICKA2 & Teresa WISZNIOWSKA2 1 Department of General and Mathematical Geology, AGH University of Science and Technology, Al. Mickiewicza 30, 30-059 Kraków, Poland 2 Department of Palaeozoology, Institute of Zoology, University of Wroc³aw, Sienkiewicza, 21, 50-335 Wroc³aw, Poland Kotlarczyk, J., Jerzmañska, A., Œwidnicka, E. & Wiszniowska, T., 2006. A framework of ichthyofaunal ecostrati- graphy of the Oligocene–Early Miocene strata of the Polish Outer Carpathian basin. Annales Societatis Geologorum Poloniae, 76: 1–111. Abstract: The paper presents the results of an analysis of ichthyofaunal variability throughout the section of the Menilite-Krosno Series (MKS) in the Outer Carpathians of Poland. The studied tanathocoenoses were formed at the bottom of a more than 2,000 m deep northern basin of the Tethys, being largely represented by the continental rise and bottoms of its narrow furrows, and – to a lesser degree – the continental slope and slopes of a submarine high. Lateral variability of statististically representative assemblages of tanathocoenoses hosted in thin, isochro- nous horizons is interpreted as a result of both local changes of ichthyocoenoses and the influence of post-mortem relocation of fishes that mainly dwelled the shelf and upper continental slope. Vertical variability, in turn, is considered as a resulting from changeable conditions of the ecological environment, the input and outflow of taxa whose evolution proceeded in the Indo-Pacific area, and the species extinction. Changeability of ichthyofauna within a ca. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences. -
Title the ZOOGEOGRAPHICAL ASPECTS of the JAPAN
THE ZOOGEOGRAPHICAL ASPECTS OF THE JAPAN Title SEA -PART V- Author(s) Nishimura, Saburo PUBLICATIONS OF THE SETO MARINE BIOLOGICAL Citation LABORATORY (1969), 17(2): 67-142 Issue Date 1969-09-30 URL http://hdl.handle.net/2433/175589 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University THE ZOOGEOGRAPHICAL ASPECTS OF THE JAPAN SEA 1 PART V ) SABURO NISHIMURA Seta Marine Biological Laboratory, Sirahama With Text-figures 31-48 CONTENTS Page 4. Distribution of Animal Populations in Relation to the Hydrography of the Japan Sea ...................·............................................................................................... 67 4.1. The Oceanographic Structure and Animal Communities . ....................................... 68 4.2. Movement and Transformation of "Vater Masses and the Migrations of Animal Populations . 82 4.2.1. Winter to Spring Aspects . .. .. .. .. 82 4.2.2. Summer Aspects .... .... ............. ... .. ....... .... ....... ....... ................. ............. .. .... 92 4.2.3. Autumnal Aspects . .. .. .. .. 99 4.2.4. Returning to the Winter Aspects .................................................................. 101 5. Characteristics in Biological Production in the Japan Sea . I 05 5.1. Characteristics in Plankton Production ................................................................ 105 5.2. Biological Seasons and Bioclimatic Regions .......................................................... II 0 5.3. Fate of Immigrant Southern and Northern Populations ......................................... -
Marine Fishes of the Azores: an Annotated Checklist and Bibliography
MARINE FISHES OF THE AZORES: AN ANNOTATED CHECKLIST AND BIBLIOGRAPHY. RICARDO SERRÃO SANTOS, FILIPE MORA PORTEIRO & JOÃO PEDRO BARREIROS SANTOS, RICARDO SERRÃO, FILIPE MORA PORTEIRO & JOÃO PEDRO BARREIROS 1997. Marine fishes of the Azores: An annotated checklist and bibliography. Arquipélago. Life and Marine Sciences Supplement 1: xxiii + 242pp. Ponta Delgada. ISSN 0873-4704. ISBN 972-9340-92-7. A list of the marine fishes of the Azores is presented. The list is based on a review of the literature combined with an examination of selected specimens available from collections of Azorean fishes deposited in museums, including the collection of fish at the Department of Oceanography and Fisheries of the University of the Azores (Horta). Personal information collected over several years is also incorporated. The geographic area considered is the Economic Exclusive Zone of the Azores. The list is organised in Classes, Orders and Families according to Nelson (1994). The scientific names are, for the most part, those used in Fishes of the North-eastern Atlantic and the Mediterranean (FNAM) (Whitehead et al. 1989), and they are organised in alphabetical order within the families. Clofnam numbers (see Hureau & Monod 1979) are included for reference. Information is given if the species is not cited for the Azores in FNAM. Whenever available, vernacular names are presented, both in Portuguese (Azorean names) and in English. Synonyms, misspellings and misidentifications found in the literature in reference to the occurrence of species in the Azores are also quoted. The 460 species listed, belong to 142 families; 12 species are cited for the first time for the Azores. -
Otolith Atlas for the Western Mediterranean, North and Central Eastern Atlantic
SCIENTIA MARINA 72S1 July 2008, 7-198, Barcelona (Spain) ISSN: 0214-8358 Otolith atlas for the western Mediterranean, north and central eastern Atlantic VICTOR M. TUSET 1, ANTONI LOMBARTE 2 and CARLOS A. ASSIS 3 1 Instituto Canario de Ciencias Marinas, Departamento de Biología Pesquera, P.O. Box. 56, E-35200 Telde (Las Palmas), Canary Islands, Spain. E-mail: [email protected] 2 Institut de Ciències del Mar-CSIC, Departament de Recursos Marins Renovables, Passeig Marítim 37-49, Barcelona 08003, Catalonia, Spain. 3 Instituto de Oceanografia e Departamento de Biologia Animal, Faculdade de Ciências da Universidade de Lisboa, Campo Grande 1749-016, Lisboa, Portugal. SUMMARY: The sagittal otolith of 348 species, belonging to 99 families and 22 orders of marine Teleostean fishes from the north and central eastern Atlantic and western Mediterranean were described using morphological and morphometric characters. The morphological descriptions were based on the otolith shape, outline and sulcus acusticus features. The mor- phometric parameters determined were otolith length (OL, mm), height (OH, mm), perimeter (P; mm) and area (A; mm2) and were expressed in terms of shape indices as circularity (P2/A), rectangularity (A/(OL×OH)), aspect ratio (OH/OL; %) and OL/fish size. The present Atlas provides information that complements the characterization of some ichthyologic taxa. In addition, it constitutes an important instrument for species identification using sagittal otoliths collected in fossiliferous layers, in archaeological sites or in feeding remains of bony fish predators. Keywords: otolith, sagitta, morphology, morphometry, western Mediterranean, north eastern Atlantic, central eastern Atlantic. RESUMEN: Otolitos de peces del mediterráneo occidental y del atlántico central y nororiental. -
Deep-Ocean Climate Change Impacts on Habitat, Fish and Fisheries, by Lisa Levin, Maria Baker, and Anthony Thompson (Eds)
ISSN 2070-7010 FAO 638 FISHERIES AND AQUACULTURE TECHNICAL PAPER 638 Deep-ocean climate change impacts on habitat, fish and fisheries Deep-ocean climate change impacts on habitat, fish and fisheries This publication presents the outcome of a meeting between the FAO/UNEP ABNJ Deep-seas and Biodiversity project and the Deep Ocean Stewardship Initiative. It focuses on the impacts of climatic changes on demersal fisheries, and the interactions of these fisheries with other species and vulnerable marine ecosystems. Regional fisheries management organizations rely on scientific information to develop advice to managers. In recent decades, climate change has been a focus largely as a unidirectional forcing over decadal timescales. However, changes can occur abruptly when critical thresholds are crossed. Moreover, distribution changes are expected as populations shift from existing to new areas. Hence, there is a need for new monitoring programmes to help scientists understand how these changes affect productivity and biodiversity. costa = 9,4 mm ISBN 978-92-5-131126-4 ISSN 2070-7010 FA 9 789251 311264 CA2528EN/1/09.19 O Cover image: Time of emergence of seafloor climate changes. Figure 7 in Chapter 8 of this Technical Paper. FAO FISHERIES AND Deep-ocean climate change AQUACULTURE TECHNICAL impacts on habitat, fish and PAPER fisheries 638 Edited by Lisa Levin Center for Marine Biodiversity and Conservation and Integrative Oceanography Division Scripps Institution of Oceanography University of California San Diego United States of America Maria Baker University of Southampton National Oceanography Centre Southampton United Kingdom of Great Britain and Northern Ireland Anthony Thompson Consultant Fisheries and Aquaculture Department Food and Agriculture Organization of the United Nations Rome Italy FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Rome, 2018 FAO. -
Bio 209 Course Title: Chordates
BIO 209 CHORDATES NATIONAL OPEN UNIVERSITY OF NIGERIA SCHOOL OF SCIENCE AND TECHNOLOGY COURSE CODE: BIO 209 COURSE TITLE: CHORDATES 136 BIO 209 MODULE 4 MAIN COURSE CONTENTS PAGE MODULE 1 INTRODUCTION TO CHORDATES…. 1 Unit 1 General Characteristics of Chordates………… 1 Unit 2 Classification of Chordates…………………... 6 Unit 3 Hemichordata………………………………… 12 Unit 4 Urochordata………………………………….. 18 Unit 5 Cephalochordata……………………………... 26 MODULE 2 VERTEBRATE CHORDATES (I)……... 31 Unit 1 Vertebrata…………………………………….. 31 Unit 2 Gnathostomata……………………………….. 39 Unit 3 Amphibia…………………………………….. 45 Unit 4 Reptilia……………………………………….. 53 Unit 5 Aves (I)………………………………………. 66 Unit 6 Aves (II)……………………………………… 76 MODULE 3 VERTEBRATE CHORDATES (II)……. 90 Unit 1 Mammalia……………………………………. 90 Unit 2 Eutherians: Proboscidea, Sirenia, Carnivora… 100 Unit 3 Eutherians: Edentata, Artiodactyla, Cetacea… 108 Unit 4 Eutherians: Perissodactyla, Chiroptera, Insectivora…………………………………… 116 Unit 5 Eutherians: Rodentia, Lagomorpha, Primata… 124 MODULE 4 EVOLUTION, ADAPTIVE RADIATION AND ZOOGEOGRAPHY………………. 136 Unit 1 Evolution of Chordates……………………… 136 Unit 2 Adaptive Radiation of Chordates……………. 144 Unit 3 Zoogeography of the Nearctic and Neotropical Regions………………………………………. 149 Unit 4 Zoogeography of the Palaearctic and Afrotropical Regions………………………………………. 155 Unit 5 Zoogeography of the Oriental and Australasian Regions………………………………………. 160 137 BIO 209 CHORDATES COURSE GUIDE BIO 209 CHORDATES Course Team Prof. Ishaya H. Nock (Course Developer/Writer) - ABU, Zaria Prof. T. O. L. Aken’Ova (Course -
Relationships of Lower Euteleostean Fishes
CHAPTER 12 Relationships of Lower Euteleostean Fishes G. DAVID JOHNSON COLIN PATTERSON National Museum of Natural History Natural History Museum Smithsonian Institution London, England Washington, D.C.- We all make mistakes; then we're sorry. What are the relationships of and within the Os- Popular song meroidei? (6) What are the relationships of and within Salmonidae? (7) Where does Lepidogalaxias belong? (8) What are the relationships within stomiiform fishes? (9) What of the Myctophoidei, as recognized by I. Introduction Greenwood et al. (1966, i.e., Aulopiformes and Myc- tophiformes in current terminology)? In that agenda, In the first Interrelationships of Fishes lower eutel- items (8) and (9) are treated elsewhere in this volume eosts, or "protacanthopterygians" as they were then and do not concern us, but items (1) through (7) do. called, were omitted, with only a comment in the Some classifications and/or cladograms of lower eu- Preface citing Weitzman (1967, on osmeroids and teleosts, dating back to the first application of cladistic stomiatoids), McDowall (1969, on osmeroids and ga- method, are summarized in Fig. 1. As is obvious from laxioids), Rosen and Greenwood (1970, on gonoryn- incongruence between all the patterns in Fig. 1, there chiforms and ostariophysans), Greenwood and Rosen has been protracted argument on how lower euteleos- (1971, on argentinoids and alepocephaloids), and Nel- tean groups are interrelated, how they are related to son (1970b, on salangids and argentinids; 1972, on neoteleosts (stomiiforms and eurypterygians, John- esocoids and galaxioids). son, 1992), and what group is basal to other euteleosts. Ten years later, in Ontogeny and Systematics of Fishes, The most substantial treatment of these problems is Fink (1984a) summarized the history of protacantho- in Begle's (1991,1992) cladistic analyses of Osmeroidei pterygians as "erosion" and "attrition, most notably (1991) and Argentinoidei (1992) (Fig.