<I>Coccomyces</I> with Dimorphic Paraphyses
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Methods and Work Profile
REVIEW OF THE KNOWN AND POTENTIAL BIODIVERSITY IMPACTS OF PHYTOPHTHORA AND THE LIKELY IMPACT ON ECOSYSTEM SERVICES JANUARY 2011 Simon Conyers Kate Somerwill Carmel Ramwell John Hughes Ruth Laybourn Naomi Jones Food and Environment Research Agency Sand Hutton, York, YO41 1LZ 2 CONTENTS Executive Summary .......................................................................................................................... 8 1. Introduction ............................................................................................................ 13 1.1 Background ........................................................................................................................ 13 1.2 Objectives .......................................................................................................................... 15 2. Review of the potential impacts on species of higher trophic groups .................... 16 2.1 Introduction ........................................................................................................................ 16 2.2 Methods ............................................................................................................................. 16 2.3 Results ............................................................................................................................... 17 2.4 Discussion .......................................................................................................................... 44 3. Review of the potential impacts on ecosystem services ....................................... -
Diversity of Fungal Assemblages in Roots of Ericaceae in Two
Diversity of fungal assemblages in roots of Ericaceae in two Mediterranean contrasting ecosystems Ahlam Hamim, Lucie Miche, Ahmed Douaik, Rachid Mrabet, Ahmed Ouhammou, Robin Duponnois, Mohamed Hafidi To cite this version: Ahlam Hamim, Lucie Miche, Ahmed Douaik, Rachid Mrabet, Ahmed Ouhammou, et al.. Diversity of fungal assemblages in roots of Ericaceae in two Mediterranean contrasting ecosystems. Comptes Rendus Biologies, Elsevier Masson, 2017, 340 (4), pp.226-237. 10.1016/j.crvi.2017.02.003. hal- 01681523 HAL Id: hal-01681523 https://hal.archives-ouvertes.fr/hal-01681523 Submitted on 23 Apr 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/315062117 Diversity of fungal assemblages in roots of Ericaceae in two Mediterranean contrasting ecosystems Article in Comptes rendus biologies · March 2017 DOI: 10.1016/j.crvi.2017.02.003 CITATIONS READS 0 37 7 authors, including: Ahmed Douaik Rachid Mrabet Institut National de Recherche Agronomique -
The Fungi of Slapton Ley National Nature Reserve and Environs
THE FUNGI OF SLAPTON LEY NATIONAL NATURE RESERVE AND ENVIRONS APRIL 2019 Image © Visit South Devon ASCOMYCOTA Order Family Name Abrothallales Abrothallaceae Abrothallus microspermus CY (IMI 164972 p.p., 296950), DM (IMI 279667, 279668, 362458), N4 (IMI 251260), Wood (IMI 400386), on thalli of Parmelia caperata and P. perlata. Mainly as the anamorph <it Abrothallus parmeliarum C, CY (IMI 164972), DM (IMI 159809, 159865), F1 (IMI 159892), 2, G2, H, I1 (IMI 188770), J2, N4 (IMI 166730), SV, on thalli of Parmelia carporrhizans, P Abrothallus parmotrematis DM, on Parmelia perlata, 1990, D.L. Hawksworth (IMI 400397, as Vouauxiomyces sp.) Abrothallus suecicus DM (IMI 194098); on apothecia of Ramalina fustigiata with st. conid. Phoma ranalinae Nordin; rare. (L2) Abrothallus usneae (as A. parmeliarum p.p.; L2) Acarosporales Acarosporaceae Acarospora fuscata H, on siliceous slabs (L1); CH, 1996, T. Chester. Polysporina simplex CH, 1996, T. Chester. Sarcogyne regularis CH, 1996, T. Chester; N4, on concrete posts; very rare (L1). Trimmatothelopsis B (IMI 152818), on granite memorial (L1) [EXTINCT] smaragdula Acrospermales Acrospermaceae Acrospermum compressum DM (IMI 194111), I1, S (IMI 18286a), on dead Urtica stems (L2); CY, on Urtica dioica stem, 1995, JLT. Acrospermum graminum I1, on Phragmites debris, 1990, M. Marsden (K). Amphisphaeriales Amphisphaeriaceae Beltraniella pirozynskii D1 (IMI 362071a), on Quercus ilex. Ceratosporium fuscescens I1 (IMI 188771c); J1 (IMI 362085), on dead Ulex stems. (L2) Ceriophora palustris F2 (IMI 186857); on dead Carex puniculata leaves. (L2) Lepteutypa cupressi SV (IMI 184280); on dying Thuja leaves. (L2) Monographella cucumerina (IMI 362759), on Myriophyllum spicatum; DM (IMI 192452); isol. ex vole dung. (L2); (IMI 360147, 360148, 361543, 361544, 361546). -
Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
Five New Species of Hypoderma (Rhytismatales, Ascomycota) with a Key to Hypoderma Species Known from China
Nova Hedwigia 82 1—2 91—104 Stuttgart, February 2006 Five new species of Hypoderma (Rhytismatales, Ascomycota) with a key to Hypoderma species known from China by Cheng-Lin Hou and Meike Piepenbring* Botanisches Institut, J. W. Goethe-Universität Frankfurt am Main, 60054 Frankfurt/M., Germany With 32 figures Hou, C.-L. & M. Piepenbring (2006): Five new species of Hypoderma (Rhytismatales, Ascomycota) with a key to Hypoderma species known from China. - Nova Hedwigia 82: 91-104. Abstract: Five new species of Hypoderma are described from China. They are Hypoderma berberidis on living prickles of Berberis jamesiana, H. cuspidatum on twigs of Rhododendron sp., H. linderae on leaves of Lindera glauca, H. shiqii on twigs of Rhododendron sp., and H. smilacicola on leaves of Smilax bracteata. They differ from known species mainly by the shape and position of their ascomata as well as characteristics of ascospores. A key to nine Hypoderma species known for China is provided. Key words: Berberidaceae, Ericaceae, Lauraceae, morphology, Rhytismataceae, Smilacaceae, taxonomy. Introduction With more than 30 species, Hypoderma is the third largest genus of the Rhytismatales, following Lophodermium and Coccomyces. The genus Hypoderma is separated from Lophodermium based on characteristics of asci and ascospores. Species of Hypoderma have more or less clavate asci and ellipsoid to clavate ascospores while those of Lophodermium have cylindrical asci and filiform ascospores (Cannon & Minter 1986, Darker 1967, Powell 1974). The long-standing nomenclatural problem concerning the generic name of Hypoderma was solved by Cannon & Minter (1983). Powell (1974) contributed a monograph on species of Hypoderma worldwide and recognized eight species. -
Coccomyces Dentatus (J.C
Coccomyces dentatus (J.C. Schmidt & Kunze) Sacc., Michelia 1(no. 1): 59 (1877) COROLOGíA Registro/Herbario Fecha Lugar Hábitat MAR-180409 175 18/04/2009 Río Guadalix, Puente de San Sobre hojas caídas Leg.: Fermín Pancorbo, José Antonio, Dehesa de Moncalvillo de encina (Quercus Cuesta, Miguel Á. Ribes (San Agustín del Guadalix) ilex) Det.: Miguel Á. Ribes 650 m. 30T VL4834 TAXONOMíA Basiónimo: Phacidium dentatum J.C. Schmidt (1817) Citas en listas publicadas: Saccardo's Syll. fung. III: 628; VIII: 745; XII: 117; XVIII: 164; XIX: 362; XXII: 750. Posición en la clasificación: Rhytismataceae, Rhytismatales, Leotiomycetidae, Leotiomycetes, Ascomycota, Fung Sinónimos: o Coccomyces bromeliacearum Theiss., Beih. bot. Zbl., Abt. 1 27: 407 (1910) o Coccomyces dentatus f. Lauri Rehm, in Theissen, Beih. bot. Zbl., Abt. 1 27: 406 (1910) o Coccomyces filicicola Speg., Boletín de la Academia Nacional de Ciencias de Córdoba 23(3-4): 514 (1919) o Coccomyces pentagonus Kirschst., Annls mycol. 34: 208 (1936) o Leptostroma quercinum Lasch, in Klotzsch, Klotzsch Herb. Myc.: no. 1075 (1845) o Leptothyrium castaneae var. quercus C. Massal. o Leptothyrium quercinum (Lasch) Sacc., Michelia 2(no. 6): 113 (1880) o Lophodermium dentatum (J.C. Schmidt & Kunze) De Not., G. bot. ital., n.s. 2(7-8): 43 (1847) o Phacidium dentatum J.C. Schmidt, Mykologische Hefte (Leipzig) 1: 41 (1817) DESCRIPCIÓN MACRO Apotecios de aproximadamente 1 mm, formando una capa estromática pardo-grisácea, en forma de pentágono (a veces sólo con 4 lados), que al madurar forman 4-5 fisuras lineales radiales, dejando ver el himenio de color grisáceo. Sobre las hojas en las que fructifican forman manchas más claras, en forma de mosaico y delimitadas por una línea negra, pero el resto de la hoja suele estar intacta y con su color original. -
Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two
(topsheet) Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113. Fieldiana, Botany H. Thorsten Lumbsch Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7881 fax: 312-665-7158 e-mail: [email protected] Sabine M. Huhndorf Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7855 fax: 312-665-7158 e-mail: [email protected] 1 (cover page) FIELDIANA Botany NEW SERIES NO 00 Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 H. Thorsten Lumbsch Sabine M. Huhndorf [Date] Publication 0000 PUBLISHED BY THE FIELD MUSEUM OF NATURAL HISTORY 2 Table of Contents Abstract Part One. Outline of Ascomycota - 2009 Introduction Literature Cited Index to Ascomycota Subphylum Taphrinomycotina Class Neolectomycetes Class Pneumocystidomycetes Class Schizosaccharomycetes Class Taphrinomycetes Subphylum Saccharomycotina Class Saccharomycetes Subphylum Pezizomycotina Class Arthoniomycetes Class Dothideomycetes Subclass Dothideomycetidae Subclass Pleosporomycetidae Dothideomycetes incertae sedis: orders, families, genera Class Eurotiomycetes Subclass Chaetothyriomycetidae Subclass Eurotiomycetidae Subclass Mycocaliciomycetidae Class Geoglossomycetes Class Laboulbeniomycetes Class Lecanoromycetes Subclass Acarosporomycetidae Subclass Lecanoromycetidae Subclass Ostropomycetidae 3 Lecanoromycetes incertae sedis: orders, genera Class Leotiomycetes Leotiomycetes incertae sedis: families, genera Class Lichinomycetes Class Orbiliomycetes Class Pezizomycetes Class Sordariomycetes Subclass Hypocreomycetidae Subclass Sordariomycetidae Subclass Xylariomycetidae Sordariomycetes incertae sedis: orders, families, genera Pezizomycotina incertae sedis: orders, families Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 Introduction Literature Cited 4 Abstract Part One presents the current classification that includes all accepted genera and higher taxa above the generic level in the phylum Ascomycota. -
Notizbuchartige Auswahlliste Zur Bestimmungsliteratur Für Europäische Pilzgattungen Der Discomyceten Und Hypogäischen Ascomyc
Pilzgattungen Europas - Liste 8: Notizbuchartige Auswahlliste zur Bestimmungsliteratur für Discomyceten und hypogäische Ascomyceten Bernhard Oertel INRES Universität Bonn Auf dem Hügel 6 D-53121 Bonn E-mail: [email protected] 24.06.2011 Beachte: Ascomycota mit Discomyceten-Phylogenie, aber ohne Fruchtkörperbildung, wurden von mir in die Pyrenomyceten-Datei gestellt. Erstaunlich ist die Vielzahl der Ordnungen, auf die die nicht- lichenisierten Discomyceten verteilt sind. Als Überblick soll die folgende Auflistung dieser Ordnungen dienen, wobei die Zuordnung der Arten u. Gattungen dabei noch sehr im Fluss ist, so dass mit ständigen Änderungen bei der Systematik zu rechnen ist. Es darf davon ausgegangen werden, dass die Lichenisierung bestimmter Arten in vielen Fällen unabhängig voneinander verlorengegangen ist, so dass viele Ordnungen mit üblicherweise lichenisierten Vertretern auch einige wenige sekundär entstandene, nicht-licheniserte Arten enthalten. Eine Aufzählung der zahlreichen Familien innerhalb dieser Ordnungen würde sogar den Rahmen dieser Arbeit sprengen, dafür muss auf Kirk et al. (2008) u. auf die neuste Version des Outline of Ascomycota verwiesen werden (www.fieldmuseum.org/myconet/outline.asp). Die Ordnungen der europäischen nicht-lichenisierten Discomyceten und hypogäischen Ascomyceten Wegen eines fehlenden modernen Buches zur deutschen Discomycetenflora soll hier eine Übersicht über die Ordnungen der Discomyceten mit nicht-lichenisierten Vertretern vorangestellt werden (ca. 18 europäische Ordnungen mit nicht- lichenisierten Discomyceten): Agyriales (zu Lecanorales?) Lebensweise: Zum Teil lichenisiert Arthoniales (= Opegraphales) Lebensweise: Zum Teil lichenisiert Caliciales (zu Lecanorales?) Lebensweise: Zum Teil lichenisiert Erysiphales (diese aus praktischen Gründen in der Pyrenomyceten- Datei abgehandelt) Graphidales [seit allerneuster Zeit wieder von den Ostropales getrennt gehalten; s. Wedin et al. (2005), MR 109, 159-172; Lumbsch et al. -
New Contributions to the Turkish Ascomycota
Turkish Journal of Botany Turk J Bot (2018) 42: 644-652 http://journals.tubitak.gov.tr/botany/ © TÜBİTAK Research Article doi:10.3906/bot-1712-1 New contributions to the Turkish Ascomycota Abdullah KAYA*, Yasin UZUN Department of Biology, Kamil Özdağ Science Faculty, Karamanoğlu Mehmetbey University, Karaman, Turkey Received: 01.12.2017 Accepted/Published Online: 06.05.2018 Final Version: 26.09.2018 Abstract: Nine discomycete and one sordariomycete (Ascomycota) species are reported for the first time from Turkey. The genera Coccomyces, Kompsoscypha, Pseudopithyella, Strobiloscypha, and Lasiosphaeris have not been reported before in the country. Anthracobia, Plicaria, Sclerotinia, and Pithya species are new records added to the previous knowledge. Macro- and micromorphological descriptions and illustrations for each new taxon are provided. Key words: Ascomycota, biodiversity, new records, Turkey 1. Introduction Spooner (2001), Monti and Marchetti (2003), Medardi The knowledge of higher fungi in Turkey has been (2006), Peric et al. (2013), Thompson (2013), and Beug et increasing over the years. More than 2500 species has been al. (2014). identified so far in the country, and most of them have Specimens are deposited at Karamanoğlu Mehmetbey been published as checklists (Sesli and Denchev, 2014; University, Kamil Özdağ Science Faculty, Department of Solak et al., 2015). The number of taxa reached almost Biology. 210 ascomycetes. Since then, nearly 90 more species of Ascomycota were added to the former list (Akata et al., 3. Results 2016a, 2016b; Akçay and Uzun, 2016; Doğan et al., 2016; The systematics of the species are given according to Dülger and Akata, 2016; Elliot et al., 2016; Kaya, 2016; Index Fungorum (www.indexfungorum.org; accessed 30 Kaya et al., 2016; Taşkın et al., 2016; Acar and Uzun, 2017; November 2017) and Wijayawardene et al. -
Complete References List
Aanen, D. K. & T. W. Kuyper (1999). Intercompatibility tests in the Hebeloma crustuliniforme complex in northwestern Europe. Mycologia 91: 783-795. Aanen, D. K., T. W. Kuyper, T. Boekhout & R. F. Hoekstra (2000). Phylogenetic relationships in the genus Hebeloma based on ITS1 and 2 sequences, with special emphasis on the Hebeloma crustuliniforme complex. Mycologia 92: 269-281. Aanen, D. K. & T. W. Kuyper (2004). A comparison of the application of a biological and phenetic species concept in the Hebeloma crustuliniforme complex within a phylogenetic framework. Persoonia 18: 285-316. Abbott, S. O. & Currah, R. S. (1997). The Helvellaceae: Systematic revision and occurrence in northern and northwestern North America. Mycotaxon 62: 1-125. Abesha, E., G. Caetano-Anollés & K. Høiland (2003). Population genetics and spatial structure of the fairy ring fungus Marasmius oreades in a Norwegian sand dune ecosystem. Mycologia 95: 1021-1031. Abraham, S. P. & A. R. Loeblich III (1995). Gymnopilus palmicola a lignicolous Basidiomycete, growing on the adventitious roots of the palm sabal palmetto in Texas. Principes 39: 84-88. Abrar, S., S. Swapna & M. Krishnappa (2012). Development and morphology of Lysurus cruciatus--an addition to the Indian mycobiota. Mycotaxon 122: 217-282. Accioly, T., R. H. S. F. Cruz, N. M. Assis, N. K. Ishikawa, K. Hosaka, M. P. Martín & I. G. Baseia (2018). Amazonian bird's nest fungi (Basidiomycota): Current knowledge and novelties on Cyathus species. Mycoscience 59: 331-342. Acharya, K., P. Pradhan, N. Chakraborty, A. K. Dutta, S. Saha, S. Sarkar & S. Giri (2010). Two species of Lysurus Fr.: addition to the macrofungi of West Bengal. -
<I>Coccomyces Hubeiensis</I>, a New Fungus Of
ISSN (print) 0093-4666 © 2012. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/122.249 Volume 122, pp. 249–253 October–December 2012 Coccomyces hubeiensis, a new fungus of Rhytismatales from China Meng-Shi Yang1, Ying-Ren Lin2*, Lan Zhang1 & Xiao-Yan Wang1 1 School of Life Science & 2 School of Forestry & Landscape Architecture, Anhui Agricultural University, West Changjiang Road 130, Hefei, Anhui 230036, China *Correspondence to: [email protected] Abstract —A new fungus found on fallen leaves of Rhododendron erubescens from the Shennongjia forestry region of Hubei Province, China, is described as Coccomyces hubeiensis. This species differs from C. dentatus by its asci with subtruncate-conical apices, paraphyses branched near the top, infrequent zone lines, and the absence of conidiomata. The type specimen is deposited in the Reference Collection of Forest Fungi of Anhui Agricultural University, China (AAUF). Key words —Rhytismataceae, morphology, Ericaceae Introduction Coccomyces De Not., established by de Notaris in 1847, is now placed in the Rhytismatales (Leotiomycetes, Ascomycota) (Kirk et al. 2008). Coccomyces taxa are characterized by polygonal or more or less circular ascomata that open by several radiate or irregular splits, cylindrical to clavate asci, and filiform, long- fusiform, or clavate ascospores, often with gelatinous sheaths (Sherwood 1980; Cannon & Minter 1986; Johnston 1986, 2000; Spooner 1990; Lin et al. 1994; Jia et al. 2012). External shape, size, and ascomal openings, ascal shape and size, and the shape of paraphyses at the apex are regarded as the most important taxonomic characters (Johnston 1986; Lin 1998). Twenty-five Coccomyces species have been reported in China (Korf & Zhuang 1985; Lin 1998; Hou et al. -
Ascomyceteorg 07-06 Ascomyceteorg
The Richard P. Korf Herbarium and CUP’s geographical collections: the enduring legacy of a globe-trotting mycologist Scott LaGRECA Summary: Richard P. Korf’s many contributions to herbarium CUP are spotlighted, with an overview of his personal herbarium, and the thousands of foreign specimens he has given to CUP’s geographical collections. Dick’s foreign fieldwork is summarized from 1957 to the present, giving a rough itinerary of Dick’s professional life. A table of fungal taxa described or recombined by Dr. Korf is provided. Keywords: CUP, Korf, herbarium, new species, types. Ascomycete.org, 7 (6) : 245-254. Novembre 2015 Mise en ligne le 30/11/2015 he Richard P. Korf Herbarium — now housed in two herbarium there in the Fall of 1950, and a handful of his class’ collections were Tcases at Cornell University’s Plant Pathology Herbarium (CUP) — preserved in his personal herbarium. Outside of class, he did field- comprises almost 5,000 specimens, including 257 types. The entire work (often by himself, but sometimes in the company of colleagues collection is now searchable on MyCoPortal (mycoportal.org): sim- from Glasgow U.) in such interesting places as Glenarbuck Woods, a ply search for CUP catalog numbers beginning with the prefix “CUP- locale now listed as a Scottish “SSSI” (Site of Special Scientific Inte- K-”. These newly assigned “CUP-K-” numbers have replaced all rest). In total, Dick amassed about 50 specimens; most are deposited numbers beginning with “R.P.K.-” that were referenced in older lite- in his personal herbarium. In 1964 — three years after becoming a rature.