References “To Steal Ideas from One Person Is Plagiarism — to Steal from Many Is Research.”
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University of Groningen On the origin of species assemblages of Bornean microsnails Hendriks, Kasper DOI: 10.33612/diss.124819761 IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from it. Please check the document version below. Document Version Publisher's PDF, also known as Version of record Publication date: 2020 Link to publication in University of Groningen/UMCG research database Citation for published version (APA): Hendriks, K. (2020). On the origin of species assemblages of Bornean microsnails. University of Groningen. https://doi.org/10.33612/diss.124819761 Copyright Other than for strictly personal use, it is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), unless the work is under an open content license (like Creative Commons). Take-down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Downloaded from the University of Groningen/UMCG research database (Pure): http://www.rug.nl/research/portal. For technical reasons the number of authors shown on this cover page is limited to 10 maximum. Download date: 25-09-2021 References “To steal ideas from one person is plagiarism — to steal from many is research.” Exact source unknown, but commonly attributed to Wallace Notestein, professor of English History at Yale University (1929) References | 279 References Alexander, J. E., and A. P. Covich. 1991. Predation risk and avoidance behavior in two freshwater snails. The Biological Bulletin 180:387–393. Allen, A. P., T. R. Whittier, P. R. Kaufmann, D. P. Larsen, R. J. O’Connor, R. M. Hughes, R. S. Stemberger, S. S. Dixit, R. O. Brinkhurst, A. T. Herlihy, and S. G. Paulsen. 1999. Concordance of taxonomic richness patterns across multiple assemblages in lakes of the northeastern United States. Canadian Journal of Fisheries and Aquatic Sciences 56:739–747. Alonso, D., R. S. Etienne, and A. J. McKane. 2006. The merits of neutral theory. Trends in Ecology & Evolution 21:451–457. Ancrenaz, M., F. Oram, L. Ambu, I. Lackman, E. Ahmad, H. Elahan, H. Kler, N. K. Abram, and E. Meijaard. 2015. Of Pongo, palms and perceptions: a multidisciplinary assessment of Bornean orang-utans Pongo pygmaeus in an oil palm context. Oryx 49:465–472. Anderson, M. J. 2017. Permutational multivariate analysis of variance (PERMANOVA). Pages 1–15 Wiley StatsRef: Statistics Reference Online. American Cancer Society. Andersson, A. F., M. Lindberg, H. Jakobsson, F. Bäckhed, P. al Nyrén, and L. Engstrand. 2008. Comparative analysis of human gut microbiota by barcoded pyrosequencing. PLOS ONE 3:e2836. Archer, F. I., P. E. Adams, and B. B. Schneiders. 2017. stratag: An R package for manipulating, summarizing and analysing population genetic data. Molecular Ecology Resources 17:5–11. August, P. V. 1983. The role of habitat complexity and heterogeneity in structuring tropical mammal communities. Ecology 64:1495–1507. Azmi, R. 1998. Natural vegetation of the Kinabatangan Floodplain. Part 1: an introduction to its natural vegetation, including a preliminary plant checklist of the region. World Wide Fund for Nature, Kuala Lumpur, Malaysia. Barbour, M. A., M. A. Rodriguez‐Cabal, E. T. Wu, R. Julkunen‐Tiitto, C. E. Ritland, A. E. Miscampbell, E. S. Jules, and G. M. Crutsinger. 2015. Multiple plant traits shape the genetic basis of herbivore community assembly. Functional Ecology 29:995–1006. Barker, G. M., and M. G. Efford. 2004. Predatory gastropods as natural enemies of terrestrial gastropods and other invertebrates. Pages 279–403 Natural enemies of terrestrial molluscs. CABI Publishing, Wallingford, UK. Baur, A., and B. Baur. 1990. Are roads barriers to dispersal in the land snail Arianta arbustorum? Canadian Journal of Zoology 68:613–617. Baur, B., and A. Baur. 1995. Habitat-related dispersal in the rock-dwelling land snail Chondrina clienta. Ecography 18:123–130. Behmer, S. T., and A. Joern. 2008. Coexisting generalist herbivores occupy unique nutritional feeding niches. Proceedings of the National Academy of Sciences 105:1977–1982. Bell, K. L., V. M. Loeffler, and B. J. Brosi. 2017. An rbcL reference library to aid in the identification of plant species mixtures by DNA metabarcoding. Applications in Plant Sciences 5:1600110. Bell, R. H. V. 1971. A grazing ecosystem in the Serengeti. Scientific American 225:86–93. Belovsky, G. E. 1986. Generalist herbivore foraging and its role in competitive interactions. Integrative and Comparative Biology 26:51–69. van Benthem Jutting, W. 1948. Critical revision of the Javanese operculate land-shells of the families Hydrocenidae, Helicinidae, Cyclophoridae, Pupinidae, and Cochlostomatidae. Archipel, Buitenzorg. van Benthem Jutting, W. 1953. Systematic studies on the non-marine Mollusca of the Indo-Australian Archipelago. III. Critical revision of the Javanese pulmonate land-snails of the families Ellobiidae to Limacidae, with an appendix on Helicarionidae. Treubia 21:291–435. Bird, C. E., S. A. Karl, P. E. Smouse, and R. J. Toonen. 2011. Detecting and measuring genetic differentiation. Pages 31–55 in C. Held, S. Koenemann, and C. Schubart, editors. Phylogeography and population genetics in Crustacea. CRC Press, Boca Raton, FL. Boettger, C. R. 1926. Untersuchungen über die Entstehung eines Faunenbildes. Zur Zoogeographie der Weichtiere Schlesiens. Zeitschrift für Morphologie und Ökologie der Tiere 6:333–414. 280 | References Bolker, B. M., M. E. Brooks, C. J. Clark, S. W. Geange, J. R. Poulsen, M. Henry, H. Stevens, and J.-S. S. White. 2009. Generalized linear mixed models: a practical guide for ecology and evolution. Trends in Ecology & Evolution 24:127–135. Bolyen, E., J. R. Rideout, M. R. Dillon, N. A. Bokulich, C. Abnet, G. A. Al-Ghalith, H. Alexander, E. J. Alm, M. Arumugam, and F. Asnicar. 2018. QIIME 2: reproducible, interactive, scalable, and extensible microbiome data science. PeerJ Preprints. Boonratana, R. 2000. A study of the vegetation of the forests in the lower Kinabatangan region, Sabah, Malaysia. Malayan Nature Journal 54:271–288. Borcard, D., and P. Legendre. 2012. Is the Mantel correlogram powerful enough to be useful in ecological analysis? A simulation study. Ecology 93:1473–1481. Bordenstein, S. R., and K. R. Theis. 2015. Host biology in light of the microbiome: ten principles of holobionts and hologenomes. PLOS Biology 13:e1002226. Bouckaert, R., J. Heled, D. Kühnert, T. Vaughan, C.-H. Wu, D. Xie, M. A. Suchard, A. Rambaut, and A. J. Drummond. 2014. BEAST2: a software platform for Bayesian evolutionary analysis. PLOS Computational Biology 10:e1003537. Brandes, J. 1951. Verschleppung von Landschnecken durch einen Singvogel. Archiv für Molluskenkunde 80:85. Brooks, M. E., K. Kristensen, K. J. van Benthem, A. Magnusson, C. W. Berg, A. Nielsen, H. J. Skaug, M. Machler, and B. M. Bolker. 2017. glmmTMB balances speed and flexibility among packages for zero-inflated generalized linear mixed modeling. The R Journal 9:378–400. Brown, R. P., and Z. Yang. 2011. Rate variation and estimation of divergence times using strict and relaxed clocks. BMC Evolutionary Biology 11:271. Bruno, J. F., J. J. Stachowicz, and M. D. Bertness. 2003. Inclusion of facilitation into ecological theory. Trends in Ecology & Evolution 18:119–125. Burridge, A. K., E. Goetze, D. Wall-Palmer, S. L. Le Double, J. Huisman, and K. T. C. A. Peijnenburg. 2017. Diversity and abundance of pteropods and heteropods along a latitudinal gradient across the Atlantic Ocean. Progress in Oceanography 158. Byers, J. E. 2000. Competition between two estuarine snails: implications for invasions of exotic species. Ecology 81:1225–1239. Cadotte, M. W. 2006. Dispersal and species diversity: a meta-analysis. The American Naturalist 167:913–924. Callahan, B. J., P. J. McMurdie, M. J. Rosen, A. W. Han, A. J. A. Johnson, and S. P. Holmes. 2016. DADA2: high-reso- lution sample inference from Illumina amplicon data. Nature Methods 13:581. Cameron, R. A. D., and B. M. Pokryszko. 2005. Estimating the species richness and composition of land mollusc communities: problems, consequences and practical advice. Journal of Conchology 38:529–548. Chang, H.-W. 1991. Activity and weight loss in relation to solar radiation in the polymorphic land snail Cepaea nemoralis. Journal of Zoology 225:213–225. Chao, A. 1984. Nonparametric estimation of the number of classes in a population. Scandinavian Journal of Statistics 11:265–270. Chapman, M. G. 1994. Small-scale patterns of distribution and size-structure of the intertidal littorinid Littorina unifasciata (Gastropoda: Littorinidae) in New South Wales. Marine and Freshwater Research 45:635–652. Chase, J. M. 2007. Drought mediates the importance of stochastic community assembly. Proceedings of the National Academy of Sciences 104:17430–17434. Chase, J. M. 2014. Spatial scale resolves the niche versus neutral theory debate. Journal of Vegetation Science 25:319–322. Chase, J. M., and J. A. Myers. 2011. Disentangling the importance of ecological niches from stochastic processes across scales. Philosophical Transactions of the Royal Society B: Biological Sciences 366:2351–2363. Clark, J. S. 2009. Beyond neutral science. Trends in Ecology & Evolution 24:8–15. Clements, R., P. K. Ng, X. X. Lu, S. Ambu, M. Schilthuizen, and C. J. Bradshaw. 2008a. Using biogeographical patterns of endemic land snails to improve conservation planning for limestone karsts. Biological conservation 141:2751–2764. Clements, R., N. S. Sodhi, M. Schilthuizen, and P. K. L. Ng. 2008b. Limestone karsts of Southeast Asia: imperiled arks of biodiversity. Bioscience 56:733–742. Colman, D. R., E. C. Toolson, and C. D. Takacs‐Vesbach. 2012. Do diet and taxonomy influence insect gut bacterial communities? Molecular Ecology 21:5124–5137. References | 281 Cook, L. M., J. D. Currey, and V. H. Sarsam. 1985. Differences in morphology in relation to microhabitat in littorinid species from a mangrove in Papua New Guinea (Mollusca: Gastropoda).