Gene Dispersal in a Population of Carapa Guianensis
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Conservation genetics of exploited Amazonian forest tree species and the impact of selective logging on inbreeding and gene dispersal in a population of Carapa guianensis Dominic Cloutier Department of Biology McGill University Montréal, Québec, Canada A thesis submitted to McGill University in partial fulfillment of the requirements of the degree of Doctor of Philosophy © Dominic Cloutier, November 2006 Library and Bibliothèque et 1+1 Archives Canada Archives Canada Published Heritage Direction du Branch Patrimoine de l'édition 395 Wellington Street 395, rue Wellington Ottawa ON K1A ON4 Ottawa ON K1A ON4 Canada Canada Your file Votre référence ISBN: 978-0-494-32166-9 Our file Notre référence ISBN: 978-0-494-32166-9 NOTICE: AVIS: The author has granted a non L'auteur a accordé une licence non exclusive exclusive license allowing Library permettant à la Bibliothèque et Archives and Archives Canada to reproduce, Canada de reproduire, publier, archiver, publish, archive, preserve, conserve, sauvegarder, conserver, transmettre au public communicate to the public by par télécommunication ou par l'Internet, prêter, telecommunication or on the Internet, distribuer et vendre des thèses partout dans loan, distribute and sell th es es le monde, à des fins commerciales ou autres, worldwide, for commercial or non sur support microforme, papier, électronique commercial purposes, in microform, et/ou autres formats. paper, electronic and/or any other formats. The author retains copyright L'auteur conserve la propriété du droit d'auteur ownership and moral rights in et des droits moraux qui protège cette thèse. this thesis. Neither the thesis Ni la thèse ni des extraits substantiels de nor substantial extracts from it celle-ci ne doivent être imprimés ou autrement may be printed or otherwise reproduits sans son autorisation. reproduced without the author's permission. ln compliance with the Canadian Conformément à la loi canadienne Privacy Act some supporting sur la protection de la vie privée, forms may have been removed quelques formulaires secondaires from this thesis. ont été enlevés de cette thèse. While these forms may be included Bien que ces formulaires in the document page count, aient inclus dans la pagination, their removal does not represent il n'y aura aucun contenu manquant. any loss of content from the thesis. ••• Canada 2 Table of contents TABLE OF CONTENTS ..................................................................................................................................... 2 RÉSUMÉ ................................................................................................................................................................ 6 ABSTRACT ........................................................................................................................................................... 8 RESUMO ............................................................................................................................................................... 9 ACKNOWLEDGEMENTS ............................................................................................................................... 11 CONTRIBUTION OF AUTHORS ................................................................................................................... 13 GENERAL INTRODUCTION AND LITERATURE REVIEW ................................................................. 14 LITERATURE CITED ........................................................................................................................................... 18 LINKING STATEMENT FOR CHAPTER 1 ................................................................................................ 20 CHAPTER 1: ....................................................................................................................................................... 21 Somatic stability ofmicrosatellite loci in eastern white pine Pinus strobus L. ABSTRACT ........................................................................................................................................................ 22 INTRODUCTION ................................................................................................................................................. 22 MATERIALS AND METHODS .............................................................................................................................. 23 Tree and tissue sampling ............................................................................................................................ 24 Microsatellite analyses ............................................................................................................................... 24 Estimates ofnumber of cel! divisions ......................................................................................................... 25 RESULTS ........................................................................................................................................................... 27 MicrosateUite variation among and within genets .................................................................................... 27 Estimates ofnumber ofceU divisions ......................................................................................................... 27 DISCUSSION ...................................................................................................................................................... 28 ACKNOWLEDGEMENTS ..................................................................................................................................... 32 REFERENCES ..................................................................................................................................................... 32 TABLES ............................................................................................................................................................. 36 Table 1 ......................................................................................................................................................... 36 Table 2 ......................................................................................................................................................... 37 Table 3 ......................................................................................................................................................... 38 Table 4 ......................................................................................................................................................... 39 FIGURES ............................................................................................................................................................ 40 3 Figure 1 ....................................................................................................................................................... 40 Figure 2 ....................................................................................................................................................... 41 LINKING STATEMENT FOR CHAPTER 2 ................................................................................................ 42 CHAPTER 2: ....................................................................................................................................................... 43 Low inbreeding and high pollen dispersal distances in populations oftwo Amazonianforest tree species ABSTRACf ........................................................................................................................................................ 44 RÉSUMÉ ............................................................................................................................................................ 44 INTRODUCTION ................................................................................................................................................. 45 MATERIALS AND METHODS .............................................................................................................................. 47 Study species and study sites ...................................................................................................................... 47 Field sampling ............................................................................................................................................ 49 Laboratory analyses ................................................................................................................................... 50 Adult genetic structure analyses ................................................................................................................ 52 "TwoGener" pollen dispersal analyses ..................................................................................................... 52 Mating system analyses .............................................................................................................................. 54 RESULTS ........................................................................................................................................................... 54 Microsatellite loci ....................................................................................................................................... 55 Adult genetic structure ...............................................................................................................................