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Chile: a Journey to the End of the World in Search of Temperate Rainforest Giants
Eliot Barden Kew Diploma Course 53 July 2017 Chile: A Journey to the end of the world in search of Temperate Rainforest Giants Valdivian Rainforest at Alerce Andino Author May 2017 1 Eliot Barden Kew Diploma Course 53 July 2017 Table of Contents 1. Title Page 2. Contents 3. Table of Figures/Introduction 4. Introduction Continued 5. Introduction Continued 6. Aims 7. Aims Continued / Itinerary 8. Itinerary Continued / Objective / the Santiago Metropolitan Park 9. The Santiago Metropolitan Park Continued 10. The Santiago Metropolitan Park Continued 11. Jardín Botánico Chagual / Jardin Botanico Nacional, Viña del Mar 12. Jardin Botanico Nacional Viña del Mar Continued 13. Jardin Botanico Nacional Viña del Mar Continued 14. Jardin Botanico Nacional Viña del Mar Continued / La Campana National Park 15. La Campana National Park Continued / Huilo Huilo Biological Reserve Valdivian Temperate Rainforest 16. Huilo Huilo Biological Reserve Valdivian Temperate Rainforest Continued 17. Huilo Huilo Biological Reserve Valdivian Temperate Rainforest Continued 18. Huilo Huilo Biological Reserve Valdivian Temperate Rainforest Continued / Volcano Osorno 19. Volcano Osorno Continued / Vicente Perez Rosales National Park 20. Vicente Perez Rosales National Park Continued / Alerce Andino National Park 21. Alerce Andino National Park Continued 22. Francisco Coloane Marine Park 23. Francisco Coloane Marine Park Continued 24. Francisco Coloane Marine Park Continued / Outcomes 25. Expenditure / Thank you 2 Eliot Barden Kew Diploma Course 53 July 2017 Table of Figures Figure 1.) Valdivian Temperate Rainforest Alerce Andino [Photograph; Author] May (2017) Figure 2. Map of National parks of Chile Figure 3. Map of Chile Figure 4. Santiago Metropolitan Park [Photograph; Author] May (2017) Figure 5. -
HHS Public Access Author Manuscript
HHS Public Access Author manuscript Author Manuscript Author ManuscriptCold Spring Author Manuscript Harb Protoc Author Manuscript . Author manuscript; available in PMC 2015 April 06. Published in final edited form as: Cold Spring Harb Protoc. ; 2013(4): 312–318. doi:10.1101/pdb.emo071357. Octodon degus (Molina 1782): A Model in Comparative Biology and Biomedicine Alvaro Ardiles1, John Ewer1, Monica L. Acosta2, Alfredo Kirkwood3, Agustin Martinez1, Luis Ebensperger4, Francisco Bozinovic4, Theresa Lee5, and Adrian G. Palacios1,6 1Centro Interdisciplinario de Neurociencia de Valparaíso, Facultad de Ciencias, Universidad de Valparaíso, 2360102 Valparaíso, Chile 2Department of Optometry and Vision Science, University of Auckland, Auckland 1142, New Zealand 3Mind/Brain Institute and Department of Neurosciences, Johns Hopkins University, Baltimore, MD 21218, USA 4Departamento de Ecología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago 6513677, Chile 5Department of Psychology & Neuroscience Program, University of Michigan, Ann Arbor, MI, 48109, USA Abstract One major goal of integrative and comparative biology is to understand and explain the interaction between the performance and behavior of animals in their natural environment. The Caviomorph, Octodon degus, is a native rodent species from Chile, and represents a unique model to study physiological and behavioral traits, including cognitive and sensory abilities. Degus live in colonies and have a well-structured social organization, with a mostly diurnal–crepuscular circadian activity pattern. More notable is the fact that in captivity, they reproduce and live for between 5 and 7 years and exhibit hallmarks of neurodegenerative diseases (including Alzheimer's disease), diabetes, and cancer. BACKGROUND The Octodontidae family (Rodentia) is endemic to South America and exhibits a wide range of diversity, from its genes to its communities. -
Bosque Pehuén Park's Flora: a Contribution to the Knowledge of the Andean Montane Forests in the Araucanía Region, Chile Author(S): Daniela Mellado-Mansilla, Iván A
Bosque Pehuén Park's Flora: A Contribution to the Knowledge of the Andean Montane Forests in the Araucanía Region, Chile Author(s): Daniela Mellado-Mansilla, Iván A. Díaz, Javier Godoy-Güinao, Gabriel Ortega-Solís and Ricardo Moreno-Gonzalez Source: Natural Areas Journal, 38(4):298-311. Published By: Natural Areas Association https://doi.org/10.3375/043.038.0410 URL: http://www.bioone.org/doi/full/10.3375/043.038.0410 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. R E S E A R C H A R T I C L E ABSTRACT: In Chile, most protected areas are located in the southern Andes, in mountainous land- scapes at mid or high altitudes. Despite the increasing proportion of protected areas, few have detailed inventories of their biodiversity. This information is essential to define threats and develop long-term • integrated conservation programs to face the effects of global change. -
Evolution of the Largest Mammalian Genome
GBE Evolution of the Largest Mammalian Genome Ben J. Evans1,*, Nathan S. Upham1,2,3,*, Goeffrey B. Golding1, Ricardo A. Ojeda4, and Agustina A. Ojeda4 1Biology Department, McMaster University, Hamilton, Ontario, Canada 2Field Museum of Natural History, Chicago, IL 3Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT 4Grupo de Investigaciones de la Biodiversidad (GIB), Instituto Argentino de Investigaciones de Zonas Aridas (IADIZA), Mendoza, Argentina *Corresponding authors: E-mails: [email protected]; [email protected]. Accepted: June 21, 2017 Data deposition: Sequence data and assemblies from this study are deposited in the Sequence Read Archive of the National Center for Biotechnology Information (NCBI), study SRP102508, bioproject PRJNA380259, including RNA sequencing (RNAseq) reads and transcriptome assemblies for O. mimax, T. barrerae, X. tropicalis,andX. laevis, and whole genome sequencing (WGS) reads, for O. mimax and T. barrerae. Contigs >200 bp in length from the draft whole genome assemblies for O. mimax and T. barrerae have been deposited at DDBJ/ENA/GenBank in subproject ID SUB2517200 under the accession NDGM00000000 and NDGN00000000. The versions described in this paper are version NDGM01000000 and NDGN01000000. High abundance k-mer contig assemblies are provided in the Supplementary Material online. Abstract The genome of the red vizcacha rat (Rodentia, Octodontidae, Tympanoctomys barrerae) is the largest of all mammals, and about double the size of their close relative, the mountain vizcacha rat Octomys mimax, even though the lineages that gave rise to these species diverged from each other only about 5 Ma. The mechanism for this rapid genome expansion is contro- versial, and hypothesized to be a consequence of whole genome duplication or accumulation of repetitive elements. -
Nine-Banded Armadillo (Dasypus Novemcinctus) Michael T
Nine-banded Armadillo (Dasypus novemcinctus) Michael T. Mengak Armadillos are present throughout much of Georgia and are considered an urban pest by many people. Armadillos are common in central and southern Georgia and can easily be found in most of Georgia’s 159 counties. They may be absent from the mountain counties but are found northward along the Interstate 75 corridor. They have poorly developed teeth and limited mobility. In fact, armadillos have small, peg-like teeth that are useful for grinding their food but of little value for capturing prey. No other mammal in Georgia has bony skin plates or a “shell”, which makes the armadillo easy to identify. Just like a turtle, the shell is called a carapace. Only one species of armadillo is found in Georgia and the southeastern U.S. However, 20 recognized species are found throughout Central and South America. These include the giant armadillo, which can weigh up to 130 pounds, and the pink fairy armadillo, which weighs less than 4 ounces. Taxonomy Order Cingulata – Armadillos Family Dasypodidae – Armadillo Nine-banded Armadillo – Dasypus novemcinctus The genus name Dasypus is thought to be derived from a Greek word for hare or rabbit. The armadillo is so named because the Aztec word for armadillo meant turtle-rabbit. The species name novemcinctus refers to the nine movable bands on the middle portion of their shell or carapace. Their common name, armadillo, is derived from a Spanish word meaning “little armored one.” Figure 1. Nine-banded Armadillo. Photo by author, 2014. Status Armadillos are considered both an exotic species and a pest. -
Vegetation Responses to Past Volcanic Disturbances at the Araucaria
Vegetation responses to past volcanic disturbances at the Araucaria araucana forest-steppe ecotone in northern Patagonia Ricardo Moreno-Gonzalez1 1University of G¨ottingen July 22, 2021 Abstract Aims Volcanic eruptions play an important role in vegetation dynamics and its historical range of variability. However, large events are infrequent and eruptions with significant imprint in today vegetation occurred far in the past, limiting our un- derstanding of ecological process. Volcanoes in southern Andes have been active during the last 10 ka, and support unique ecosystems such as the Araucaria-Nothofagus forest as part of the Valdivian Temperate Rainforest Hotspot. Araucaria is an endangered species, strongly fragmented and well adapted to disturbances. Yet it was suggested that volcanism might have increased the fragmentation of its populations. To provide an insight into the vegetation responses to past volcanic disturbances, a paleoecological study was conducted to assess the role of volcanic disturbance on the vegetation dynamics and if the current fragmentation has been caused by volcanism. Location Araucaria forest-steppe ecotone in northern Patagonia. Methods Pollen and tephra analysis from a sedimentary record. Results During the last 9 kyr, 39 tephrafall buried the vegetation around Lake Relem, more frequently between 4-2 ka. The vegetation was sensitive to small tephrafall but seldom caused significant changes. However, the large eruption of Sollipulli-Alpehue (~3 ka) might change the environmental conditions affecting severely the forest and grassland, as suggested by the pollen record. Ephedra dominated early successional stage, perhaps facilitating Nothofagus regeneration recovering original condition after ~500 years. Slight increase of pollen percentage from Araucaria and Nothofagus obliqua-type could be indicative of sparse biological legacies distributed in the landscape. -
RELEVANCE of KIN SELECTION on the EVOLUTION of COOPERATION in HYSTRICOGNATH RODENTS, Octodon Degus (Molina, 1782) AS a STUDY CASE
1 RELEVANCE OF KIN SELECTION ON THE EVOLUTION OF COOPERATION IN HYSTRICOGNATH RODENTS, Octodon degus (Molina, 1782) AS A STUDY CASE. IMPORTANCIA DE LA SELECCIÓN DE PARENTESCO EN LA EVOLUCIÓN DE LA COOPERACIÓN EN ROEDORES HISTRICOGNATOS Y EN Octodon degus (Molina, 1782) COMO CASO DE ESTUDIO. Tesis entregada a la Pontificia Universidad Católica de Chile en cumplimiento parcial de los requisitos para optar al Grado de Doctor en Ciencias con mención en Ecología por ÁLVARO LY PRIETO Director de Tesis: Luis A. Ebensperger Pesce Diciembre 2020 2 A la memoria de mi padre. 3 AGRADECIMIENTOS Quiero agradecer, en primer lugar, a Luis Ebensperger, por ser un excelente director de tesis y un verdadero tutor, siempre generoso a la hora de compartir sus conocimientos, y por su infinita paciencia y buena disposición para revisar, corregir y dar consejos. A los miembros de la comisión de tesis, por sus consejos. A Cristian Hernández y su equipo por abrirme las puertas de su laboratorio en la UdeC para aprender nuevas metodologías. También agradecer a todos los amigos, familia y a mi pareja, que han sido un soporte fundamental en este largo camino, y a todos quienes contribuyeron de alguna u otra forma en la concepción de esta tesis doctoral y en su proceso. Especialmente agradecer a quienes fueron importantes en la obtención y procesamiento de mis datos, y en los debates de ideas: a mis compañeros y amigos Raúl Sobrero, Loreto Correa, Daniela Rivera, Cecilia León, Juan C. Ramírez, Gioconda Peralta y Loreto Carrasco. Agradecer al Departamento de Ecología de la Pontificia Universidad Católica y su staff, por tener siempre buena disposición para solucionar requerimientos y vicisitudes. -
Interactions Among Introduced Ungulates, Plants, and Pollinators: a Field Study in the Temperate Forest of the Southern Andes
University of Tennessee, Knoxville TRACE: Tennessee Research and Creative Exchange Doctoral Dissertations Graduate School 5-2002 Interactions among Introduced Ungulates, Plants, and Pollinators: A Field Study in the Temperate Forest of the Southern Andes Diego P. Vazquez University of Tennessee - Knoxville Follow this and additional works at: https://trace.tennessee.edu/utk_graddiss Part of the Ecology and Evolutionary Biology Commons Recommended Citation Vazquez, Diego P., "Interactions among Introduced Ungulates, Plants, and Pollinators: A Field Study in the Temperate Forest of the Southern Andes. " PhD diss., University of Tennessee, 2002. https://trace.tennessee.edu/utk_graddiss/2169 This Dissertation is brought to you for free and open access by the Graduate School at TRACE: Tennessee Research and Creative Exchange. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of TRACE: Tennessee Research and Creative Exchange. For more information, please contact [email protected]. To the Graduate Council: I am submitting herewith a dissertation written by Diego P. Vazquez entitled "Interactions among Introduced Ungulates, Plants, and Pollinators: A Field Study in the Temperate Forest of the Southern Andes." I have examined the final electronic copy of this dissertation for form and content and recommend that it be accepted in partial fulfillment of the equirr ements for the degree of Doctor of Philosophy, with a major in Ecology and Evolutionary Biology. Daniel Simberloff, Major Professor We have read this dissertation and recommend its acceptance: David Buehler, Louis Gross, Jake Welzin Accepted for the Council: Carolyn R. Hodges Vice Provost and Dean of the Graduate School (Original signatures are on file with official studentecor r ds.) To the Graduate Council: I am submitting herewith a dissertation written by Diego P. -
Stress, Sleep, and Sex: a Review of Endocrinological Research in Octodon Degus ⇑ Carolyn M
General and Comparative Endocrinology 273 (2019) 11–19 Contents lists available at ScienceDirect General and Comparative Endocrinology journal homepage: www.elsevier.com/locate/ygcen Review article Stress, sleep, and sex: A review of endocrinological research in Octodon degus ⇑ Carolyn M. Bauer a, , Loreto A. Correa b,c, Luis A. Ebensperger c, L. Michael Romero d a Biology Department, Adelphi University, Garden City, NY, USA b Escuela de Medicina Veterinaria, Facultad de Ciencias, Universidad Mayor, Santiago, Chile c Departamento de Ecología, Facultad de Ciencias Biológicas, P. Universidad Católica de Chile, Santiago, Chile d Department of Biology, Tufts University, Medford, MA, USA article info abstract Article history: The Common Degu (Octodon degus) is a small rodent endemic to central Chile. It has become an important Received 24 December 2017 model for comparative vertebrate endocrinology because of several uncommon life-history features – it is Revised 20 February 2018 diurnal, shows a high degree of sociality, practices plural breeding with multiple females sharing natal Accepted 11 March 2018 burrows, practices communal parental care, and can easily be studied in the laboratory and the field. Available online 12 March 2018 Many studies have exploited these features to make contributions to comparative endocrinology. This review summarizes contributions in four major areas. First are studies on degu stress responses, focusing Keywords: on seasonal changes in glucocorticoid (GC) release, impacts of parental care on offspring GC responses, Agonistic behavior and fitness consequences of individual variations of GC responses. These studies have helped confirm Circadian Female masculinization the ecological relevance of stress responses. Second are studies exploring diurnal circadian rhythms of Glucocorticoid melatonin and sex steroids. -
The Octodontidae Revisited
THE OCTODONTIDAE REVISITED UNA REVISION DE OCTODONTIDAE Milton Gallardo, R. Ojeda, C. González, and C. Ríos ABSTRACT The monophyletic and depauperate assemblage of South American octodontid rodents has experienced an extensive adaptive radiation from above-ground dwellers to subterranean, saxicolous, and gerbil-like deserticolous life forms. Complex and saltational chromosomal repatterning is a hallmark of octodontid evolution. Recent molecular evidence links these chromosome dynamics with quantum genome size shifts, and probably with reticulate evolution via introgressive hybridization in the desert dwellers Tympanoctomys barrerae and Pipanacoctomys aureus. Genome duplication represents a novel mechanism of evolution in mammals and its adaptive role is reflected in the ability of deserticolous species to colonize the extreme environment of salt flats. Unique to Tympanoctomys is a the rigid bundle of hairs behind the upper incisors which is crucial to efficiently peel saltbush leaves and probably explains its broader distribution relative to P. aureus. This feature, in association with other attributes (e. g., specialized kidneys, large bullae, feeding behavior) has enabled Tympanoctomys to cope with extreme environmental conditions. Key words: Octodontidae, Octodontids, South American mammals, tetraploidy, Tympanoctomys barrerae. RESUMEN Los octodóntidos son un grupo de roedores monofiléticos que han experimentado una extensa radiación adaptativa desde especies que viven en la superficie a formas de vida subterráneas o de tipo gerbos, especializados a la vida desertícola. La evolución de los octodóntidos está marcada por reordenamientos cromsómicos complejos y de tipo saltatorio. Las evidencias moleculares recientes indican una estrecha asociación entre esta dinámica cromosómica, los cambios genómicos cuánticos y la evolución Pp. xx-xx in Kelt, D. A., E. -
Alexander 2013 Principles-Of-Animal-Locomotion.Pdf
.................................................... Principles of Animal Locomotion Principles of Animal Locomotion ..................................................... R. McNeill Alexander PRINCETON UNIVERSITY PRESS PRINCETON AND OXFORD Copyright © 2003 by Princeton University Press Published by Princeton University Press, 41 William Street, Princeton, New Jersey 08540 In the United Kingdom: Princeton University Press, 3 Market Place, Woodstock, Oxfordshire OX20 1SY All Rights Reserved Second printing, and first paperback printing, 2006 Paperback ISBN-13: 978-0-691-12634-0 Paperback ISBN-10: 0-691-12634-8 The Library of Congress has cataloged the cloth edition of this book as follows Alexander, R. McNeill. Principles of animal locomotion / R. McNeill Alexander. p. cm. Includes bibliographical references (p. ). ISBN 0-691-08678-8 (alk. paper) 1. Animal locomotion. I. Title. QP301.A2963 2002 591.47′9—dc21 2002016904 British Library Cataloging-in-Publication Data is available This book has been composed in Galliard and Bulmer Printed on acid-free paper. ∞ pup.princeton.edu Printed in the United States of America 1098765432 Contents ............................................................... PREFACE ix Chapter 1. The Best Way to Travel 1 1.1. Fitness 1 1.2. Speed 2 1.3. Acceleration and Maneuverability 2 1.4. Endurance 4 1.5. Economy of Energy 7 1.6. Stability 8 1.7. Compromises 9 1.8. Constraints 9 1.9. Optimization Theory 10 1.10. Gaits 12 Chapter 2. Muscle, the Motor 15 2.1. How Muscles Exert Force 15 2.2. Shortening and Lengthening Muscle 22 2.3. Power Output of Muscles 26 2.4. Pennation Patterns and Moment Arms 28 2.5. Power Consumption 31 2.6. Some Other Types of Muscle 34 Chapter 3. -
Burrowing Herbivores Alter Soil Carbon and Nitrogen Dynamics in a Semi-Arid Ecosystem, Argentina
Soil Biology & Biochemistry 103 (2016) 253e261 Contents lists available at ScienceDirect Soil Biology & Biochemistry journal homepage: www.elsevier.com/locate/soilbio Burrowing herbivores alter soil carbon and nitrogen dynamics in a semi-arid ecosystem, Argentina * Kenneth L. Clark a, , Lyn C. Branch b, Jose L. Hierro c, d, Diego Villarreal c a Silas Little Experimental Forest, USDA Forest Service, New Lisbon, NJ 08064, USA b Department of Wildlife Ecology and Conservation, University of Florida, Gainesville, FL 32611, USA c Facultad de Ciencias Exactas y Naturales, Universidad Nacional de La Pampa (UNLPam), Santa Rosa, La Pampa 6300, Argentina d Instituto de Ciencias de la Tierra y Ambientales de La Pampa (INCITAP, CONICET-UNLPam), Mendoza 109 Santa Rosa, La Pampa 6300, Argentina article info abstract Article history: Activities of burrowing herbivores, including movement of soil and litter and deposition of waste ma- Received 28 February 2016 terial, can alter the distribution of labile carbon (C) and nitrogen (N) in soil, affecting spatial patterning of Received in revised form nutrient dynamics in ecosystems where they are abundant. Their role in ecosystem processes in surface 22 August 2016 soil has been studied extensively, but effects of burrowing species on processes in subsurface soil remain Accepted 23 August 2016 poorly known. We investigated the effects of burrowing and grazing by plains vizcachas (Lagostomus Available online 6 September 2016 maximus, Chinchilidae), a large colonial burrowing rodent native to South America, on the distribution and dynamics of C and N in soil of a semi-arid scrub ecosystem in central Argentina. In situ N miner- Keywords: e Burrowing mammals alization (Nmin), potential Nmin and CO2 emissions were measured in surface soil (0 10 cm) and soil at ± ± fi Vizcachas the mean depth of burrows (65 10 cm; mean 1 SD) in ve colonial burrow systems and adjacent Nitrogen mineralization grazed and ungrazed zones.