RESEARCH ARTICLE Re-examining the phylogeny of clinically relevant Candida species and allied genera based on multigene analyses Clement K.M. Tsui1, Heide-Marie Daniel2, Vincent Robert3 & Wieland Meyer1,4 1Molecular Mycology Research Laboratory, Center for Infectious Diseases and Microbiology, Westmead Hospital, Westmead Millennium Institute, Westmead, NSW, Australia; 2BCCM/MUCL culture collection, Universite´ Catholique de Louvain, Unite´ de Microbiologie, Louvain-la-Neuve, Belgium; 3Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands; and 4Western Clinical School, Department of Medicine, The University of Sydney, Sydney, Australia Correspondence: Wieland Meyer, Molecular Abstract Mycology Research Laboratory, Center for Infectious Diseases and Microbiology, Yeasts of the artificial genus Candida include plant endophytes, insect symbionts, Westmead Hospital, Westmead Millennium and opportunistic human pathogens. Phylogenies based on rRNA gene and actin Institute, Westmead, NSW 2145, Australia. sequences confirmed that the genus is not monophyletic, and the relationships Tel.: 161 2 98456895; fax: 161 2 98915317; among Candida species and allied teleomorph genera are not clearly resolved. e-mail:
[email protected] Protein-coding genes have been useful to resolve taxonomic positions among a broad range of fungi. Over 70 taxa of the genus Candida and its allied sexually Received 10 August 2007; revised 18 November reproducing genera were therefore selected, and their phylogenetic relationships 2007; accepted 20 November 2007. were investigated using nuclear sequences of the largest subunit and second largest First published online 31 January 2008. subunit of RNA polymerase II gene, actin, the second subunit of the mitochondrial DOI:10.1111/j.1567-1364.2007.00342.x cytochrome oxidase gene, and D1/D2 LSU rRNA gene.