Fungal Phyla
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Leaf-Associated Shifts in Bacterial and Fungal Communities in Response to Chicken Rearing Under Moso Bamboo Forests in Subtropical China
Article Leaf-Associated Shifts in Bacterial and Fungal Communities in Response to Chicken Rearing Under Moso Bamboo Forests in Subtropical China Xiaoping Zhang 1, Zheke Zhong 1,*, Xu Gai 1, Jiafu Ying 2, Weifen Li 2, Xuhua Du 1, Fangyuan Bian 1 and Chuanbao Yang 1 1 China National Bamboo Research Center, Key Laboratory of Resources and Utilization of Bamboo of State Forestry Administration, Hangzhou 310012, China; [email protected] (X.Z.); [email protected] (X.G.); [email protected] (X.D.); [email protected] (F.B.); [email protected] (C.Y.) 2 College of Animal Sciences, Zhejiang University, Hangzhou 310058, China; [email protected] (J.Y.); wfl[email protected] (W.L.) * Correspondence: [email protected]; Tel.: +86-0571-88860734 Received: 25 January 2019; Accepted: 25 February 2019; Published: 1 March 2019 Abstract: Integrated bamboo-chicken farming (BCF) systems are a traditional agroforestry pattern with large economic benefits in subtropical China. However, little is known regarding the effect of this integration on the bamboo leaf-associated microbiome, which can be very important for disease control and nutrient turnover. In the present study, we compared the leaf-associated bacterial and fungal communities of moso bamboo (Phyllostachys edulis) in a BCF system and an adjacent moso bamboo forest (MBF). The results showed that Cyanobacteria and Ascomycota were the predominant microbial phyla associated with bamboo leaves. Chicken farming under the bamboo forest significantly increased the bacterial and fungal alpha diversity (observed operational taxonomic units (OTUs) and Simpson’s index) associated with bamboo leaves. Principal components analysis (PCoA) further confirmed the shifts in the bacterial and fungal communities caused by chicken farming. -
Synchytrium Endobioticum (Schilb.) Percival Pest Risk Assessment for Oregon
Synchytrium endobioticum (Schilb.) Percival Pest Risk Assessment for Oregon This pest risk assessment follows the format used by the Exotic Forest Pest Information System for North America. For a description of the evaluation process used, see http://spfnic.fs.fed.us/exfor/download.cfm. IDENTITY Name: Synchytrium endobioticum (Schilb.) Percival Taxonomic Position: Chytridiales: Synchytriaceae Common Name: Potato wart disease RISK RATING SUMMARY Numerical Score: 6 Relative Risk Rating: HIGH Uncertainty: Very Certain Uncertainty in this assessment results from: Potato wart has been extensively studied in the countries in which it is established. RISK RATING DETAILS Establishment potential is HIGH Justification: Potato wart is apparently native to the Andes Mountains and has subsequently been spread throughout the world through the movement of infected or contaminated tubers. It has become successfully established in several countries in Europe, Asia, Africa, North America, South America, and Oceania. Previous detections in Maryland, Pennsylvania, and West Virginia had reportedly been eradicated by 1974, although surveys conducted in Maryland revealed the presence of resting spores of the pathogen were still present in one home garden. The spores were reportedly non-viable. Spread potential is MODERATE Justification: Potato wart has been spread throughout the world through the movement of infested tubers. Local spread is primarily through the movement of contaminated soil on equipment, vehicle tires, tubers, and plants. Spores may also be spread by wind. Symptoms in the field may not manifest until after repeated cultivation of susceptible hosts within a field or garden. Infected tubers may not manifest symptoms until in storage; however, meristematic tissue (sprouts) may be so severely affected plants will not emerge from infected seed tubers. -
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
The Diversity of Basidiomycota Fungi That Have the Potential As a Source of Nutraceutical to Be Developed in the Concept of Integrated Forest Management Poisons
International Journal of Recent Technology and Engineering (IJRTE) ISSN: 2277-3878, Volume-8 Issue-2S, July 2019 The Diversity of Basidiomycota Fungi that Have the Potential as a Source of Nutraceutical to be Developed in the Concept of Integrated Forest Management Mustika Dewi, I Nyoman Pugeg Aryantha, Mamat Kandar straw mushrooms, oyster mushrooms, and shiitake Abstract: The fungus Basidiomycota found in Indonesia have mushrooms. very high diversity, but have not been explored so far. The development of local Basidiomycota mushrooms that Development of fungi Basidiomycota is an alternative as a are cultivated by utilizing space on the forest floor has not source of natural nutraceuticals, especially beta glucan and been done mostly in Indonesia. In several countries such as lovastatin compounds. This compound can be used in the pharmaceutical and food fields. This study aims to obtain Japan, people have long been cultivating shitake mushrooms Basidiomycota fungi isolates that have the potential as a by utilizing forest floors. Reported by (Savoie & Largeteau, nutraceutical source. As the first stage in this research, the 2011) that mushrooms from the Basidiomycota group are activities carried out were exploration, isolation on culture widely produced in forest areas through the utilization of media, and identification of fungi based on genotypic forest floors as a place to grow these fungi which have characters. The results showed that the fungi identified based on economic value quite high by applying the concept of their genotypic characters were Pleurotusostreatus, Ganodermacf, Resinaceum, Lentinulaedodes, micosilviculture. The concept of micosilviculture is a Vanderbyliafraxinea, Auricularia delicate, Pleurotusgiganteus, concept that is applied in the management of integrated Auricularia sp. -
Synchytrium-2
Synchytrium: Synchytrium is represented by about 200 species reported from all over the world, occurs as parasite on aquatic alga, bryophytes (mosses), pteridophytes (ferns) and mostly on flowering plants. About 80 species have been reported from India, of which S. rytzii on the members of Lamiaceae, S. trichosanthoides and S. laginariae on the members of Cucurbitaceae, S. taraxicola on Taraxacum officinale, S. sisamicola on Sesamum indicum and S. endobioticum is a well-known species which causes wart disease or black wart of potato, available in the main potato growing regions of the world, mostly in mountains with moist and cold climate. In India, this disease was first recorded at Rangbul in Darjeeling district of West Bengal in 1953. Symptoms of Disease Caused by Synchytrium: The disease is characterised by cauliflower-like black warty growth on tubers (Fig. 4.16), stolons and stem bases (Fig. 4.15). Sometimes, the size of the warts is more than the size of the tuber. Life History of Synchytrium: The life history of the most common species i.e., S. endobioticum has been studied by Miss K. M. Curtis, 1921; followed by Kohler (1923, 1931). The representation of the life cycle has been given in the Fig. 4.17. Vegetative Structure of Synchytrium: The vegetative body of Synchytrium consists of minute endobiotic holocarpic thallus, represented by naked uniflagellate zoospore with whiplash flagellum. Reproduction in Synchytrium: Synchytrium endobioticum reproduces both asexually and sexually. Vegetative reproduction is absent. During reproduction, the entire thallus transforms into a reproductive unit i.e., holocarpic. 1. Asexual Reproduction: Asexual reproduction generally occurs during favourable condition, i.e., in spring season. -
Molecular Systematics of the Marine Dothideomycetes
available online at www.studiesinmycology.org StudieS in Mycology 64: 155–173. 2009. doi:10.3114/sim.2009.64.09 Molecular systematics of the marine Dothideomycetes S. Suetrong1, 2, C.L. Schoch3, J.W. Spatafora4, J. Kohlmeyer5, B. Volkmann-Kohlmeyer5, J. Sakayaroj2, S. Phongpaichit1, K. Tanaka6, K. Hirayama6 and E.B.G. Jones2* 1Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand; 2Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand; 3National Center for Biothechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.; 4Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, U.S.A.; 5Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina 28557, U.S.A.; 6Faculty of Agriculture & Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan *Correspondence: E.B. Gareth Jones, [email protected] Abstract: Phylogenetic analyses of four nuclear genes, namely the large and small subunits of the nuclear ribosomal RNA, transcription elongation factor 1-alpha and the second largest RNA polymerase II subunit, established that the ecological group of marine bitunicate ascomycetes has representatives in the orders Capnodiales, Hysteriales, Jahnulales, Mytilinidiales, Patellariales and Pleosporales. Most of the fungi sequenced were intertidal mangrove taxa and belong to members of 12 families in the Pleosporales: Aigialaceae, Didymellaceae, Leptosphaeriaceae, Lenthitheciaceae, Lophiostomataceae, Massarinaceae, Montagnulaceae, Morosphaeriaceae, Phaeosphaeriaceae, Pleosporaceae, Testudinaceae and Trematosphaeriaceae. Two new families are described: Aigialaceae and Morosphaeriaceae, and three new genera proposed: Halomassarina, Morosphaeria and Rimora. -
F:\Zoos'p~1\2003\Decemb~1
CATALOGUE ZOOS' PRINT JOURNAL 18(12): 1280-1285 ASTERINACEAE OF INDIA V.B. Hosagoudar Microbiology Division, Tropical Botanic Garden and Research Institute, Palode, Thiruvananthapuram, Kerala 695562, India. Abstract the genera and species are arranged alphabetically under their This paper gives an account of nine genera: Asterina, respective alphabetically arranged host families. Asterolibertia, Cirsosia, Echidnodella, Echidnodes, Lembosia, Lembosina, Prillieuxina and Trichasterina Acanthaceae and an anamorph genus Asterostomella. All these Asterina asystasiae Thite in M.S. Patil & Thite 1977. J. Shivaji Univ. Sci. 17: 152. (nom.nud.) fungal genera and their respective species are arranged On leaves of Asystasia violacea, Maharashtra. alphabetically under their alphabetically arranged host families. Asterina betonicae Hosag. & Goos 1996. Mycotaxon 59: 153. Keywords On leaves of Justicia betonica, Tamil Nadu. Asterinaceae, Asterina, Asterolibertia, Asterostomella, Cirsosia, Echidnodella, Echidnodes, Asterina justiciae Thite 1977. In: M.S. Patil & Thite, J. Shivaji Univ. Sci. 17:152 (nom. nud.) Lembosia, Lembosina, Prillieuxina and Trichasterina On leaves of Justicia simplex, Maharashtra. Asterina phlogacanthi Kar & Ghosh Introduction 1986. Indian Phytopathol. 39: 211. The first report of the genus Asterina in India dates back to On leaves of Phlogacanthus curviflorus, West Bengal. Asterina carbonacea Cooke and Asterina congesta Cooke known on coriaceous leaves and Santalum album, respectively, Asterina tertiae Racib. var. africana Doidge 1920. Trans. Royal Soc. South Africa 8: 264. from Belgaum, Karnataka (Cooke, 1984). Sir E.J. Butler in 1901 1996. Hosag., Balakr. & Goos, Mycotaxon 59: 183. has identified several collections with the help of H. Sydow 1994. Hosag.& Goos, Mycotaxon 52: 470. and P. Sydow (Sydow et al.,1911). Ryan (1928) studied some of 1996. -
The Fungi of Slapton Ley National Nature Reserve and Environs
THE FUNGI OF SLAPTON LEY NATIONAL NATURE RESERVE AND ENVIRONS APRIL 2019 Image © Visit South Devon ASCOMYCOTA Order Family Name Abrothallales Abrothallaceae Abrothallus microspermus CY (IMI 164972 p.p., 296950), DM (IMI 279667, 279668, 362458), N4 (IMI 251260), Wood (IMI 400386), on thalli of Parmelia caperata and P. perlata. Mainly as the anamorph <it Abrothallus parmeliarum C, CY (IMI 164972), DM (IMI 159809, 159865), F1 (IMI 159892), 2, G2, H, I1 (IMI 188770), J2, N4 (IMI 166730), SV, on thalli of Parmelia carporrhizans, P Abrothallus parmotrematis DM, on Parmelia perlata, 1990, D.L. Hawksworth (IMI 400397, as Vouauxiomyces sp.) Abrothallus suecicus DM (IMI 194098); on apothecia of Ramalina fustigiata with st. conid. Phoma ranalinae Nordin; rare. (L2) Abrothallus usneae (as A. parmeliarum p.p.; L2) Acarosporales Acarosporaceae Acarospora fuscata H, on siliceous slabs (L1); CH, 1996, T. Chester. Polysporina simplex CH, 1996, T. Chester. Sarcogyne regularis CH, 1996, T. Chester; N4, on concrete posts; very rare (L1). Trimmatothelopsis B (IMI 152818), on granite memorial (L1) [EXTINCT] smaragdula Acrospermales Acrospermaceae Acrospermum compressum DM (IMI 194111), I1, S (IMI 18286a), on dead Urtica stems (L2); CY, on Urtica dioica stem, 1995, JLT. Acrospermum graminum I1, on Phragmites debris, 1990, M. Marsden (K). Amphisphaeriales Amphisphaeriaceae Beltraniella pirozynskii D1 (IMI 362071a), on Quercus ilex. Ceratosporium fuscescens I1 (IMI 188771c); J1 (IMI 362085), on dead Ulex stems. (L2) Ceriophora palustris F2 (IMI 186857); on dead Carex puniculata leaves. (L2) Lepteutypa cupressi SV (IMI 184280); on dying Thuja leaves. (L2) Monographella cucumerina (IMI 362759), on Myriophyllum spicatum; DM (IMI 192452); isol. ex vole dung. (L2); (IMI 360147, 360148, 361543, 361544, 361546). -
Fungal Diversity in the Mediterranean Area
Fungal Diversity in the Mediterranean Area • Giuseppe Venturella Fungal Diversity in the Mediterranean Area Edited by Giuseppe Venturella Printed Edition of the Special Issue Published in Diversity www.mdpi.com/journal/diversity Fungal Diversity in the Mediterranean Area Fungal Diversity in the Mediterranean Area Editor Giuseppe Venturella MDPI • Basel • Beijing • Wuhan • Barcelona • Belgrade • Manchester • Tokyo • Cluj • Tianjin Editor Giuseppe Venturella University of Palermo Italy Editorial Office MDPI St. Alban-Anlage 66 4052 Basel, Switzerland This is a reprint of articles from the Special Issue published online in the open access journal Diversity (ISSN 1424-2818) (available at: https://www.mdpi.com/journal/diversity/special issues/ fungal diversity). For citation purposes, cite each article independently as indicated on the article page online and as indicated below: LastName, A.A.; LastName, B.B.; LastName, C.C. Article Title. Journal Name Year, Article Number, Page Range. ISBN 978-3-03936-978-2 (Hbk) ISBN 978-3-03936-979-9 (PDF) c 2020 by the authors. Articles in this book are Open Access and distributed under the Creative Commons Attribution (CC BY) license, which allows users to download, copy and build upon published articles, as long as the author and publisher are properly credited, which ensures maximum dissemination and a wider impact of our publications. The book as a whole is distributed by MDPI under the terms and conditions of the Creative Commons license CC BY-NC-ND. Contents About the Editor .............................................. vii Giuseppe Venturella Fungal Diversity in the Mediterranean Area Reprinted from: Diversity 2020, 12, 253, doi:10.3390/d12060253 .................... 1 Elias Polemis, Vassiliki Fryssouli, Vassileios Daskalopoulos and Georgios I. -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
Molecular Taxonomy of Galactomyces Spp. and Dipodascus Capitatus
International Journal Of Medical Science And Clinical Inventions Volume 2 issue 12 2015 page no. 1485-1489 e-ISSN: 2348-991X p-ISSN: 2454-9576 Available Online At: http://valleyinternational.net/index.php/our-jou/ijmsci Molecular Taxonomy Of Galactomyces Spp. And Dipodascus Capitatus Associate With Dairy Based On Rdna Sequence Analysis In Iraq Zaidan Khlaif Imran* and Aya Kareem Jabbar Biology Department, All Women College of Science, Babylon University, Hilla, Iraq *Corresponded author: Zaidan Khlaif Imran E.mail:[email protected] ;[email protected] Abstract: Galactomyces spp is a telomorph of Geotrichum candidum (anamorph name). is used as a culture for cheese making and in some traditional fermented milks, few studies have assessed the genetic diversity of Galactomyces spp that exist in traditional cheese making facilities. The aim of this study isolation and molecular taxonomically treated of Galactomyces spp and other Candida spp. correlated with dairy products. The results showed that most dairy samples companioned with two species of Galactomyces: G.candidum and G.geotrichum , D. capitatus and four species of Candida spp.: Candida krusei , C. kefyr, C. utilis and C.glabrata .A total of 23 fungal isolates were diagnosed based on universal primers ITS1 / ITS4 to amplify the Internal transcribed region spacer. Four doubtful G.candidum isolates showed unique sizes of products PCR ranged between 380-400 bp. other Candida PCR product ranged 420-780bp. Sequence analysis identified a doubtful G.candidum into G. candidum and G.geotrichum with 97% similarities and with D. capitatus showed 93% similarities, few intraspecific variation were observed at 312-380bp in the amplicons from the primer pair ITS1-ITS4 commonly are from 380 to 400 bp for G. -
Some New Records of Black Mildew Fungi from Mahabaleshwar, Maharashtra State, India
Int. J. Life. Sci. Scienti. Res., 2(5): 559-565 (ISSN: 2455-1716) Impact Factor 2.4 SEPTEMBER-2016 Research Article (Open access) Some New Records of Black Mildew Fungi from Mahabaleshwar, Maharashtra State, India Mahendra R. Bhise1*, Chandrahas R. Patil2, Chandrakant C. Salunkhe3 1Department of Botany, L.K.D.K. Banmeru Science College, Lonar, Maharashtra, India 2Department of Botany, D. K. A. S. C. College, Ichalkaranji, Maharashtra, India 3PG Department of Botany, Krishna Mahavidhyalaya, Shivnagar, Rethare (BK.), Maharashtra, India *Address for Correspondence: Dr. Mahendra R. Bhise, Assistant Professor, Department of Botany, L.K.D.K. Banmeru Science College, Lonar, Maharashtra, India Received: 12 June 2016/Revised: 20 July 2016/Accepted: 20 August 2016 ABSTRACT- The present study deals with a total of 47 new records of black mildew fungi belonging to Meliolaceous, Asterinaceous, Schiffnerulaceous and fungi from Parodiopsidaceae groups, collected on different phanerogamic host plants from Mahabaleshwar and its surrounding areas of Satara district, Maharashtra state, India. Among these, Meliola litseae classified under family Meliolaceae (Meliolales) is found to be new record to the fungi of India and hence reported here for the first time from India. However, remaining 46 taxa are reported for the first time from the Maharashtra state. Key-Words: Black mildew, Fungi, Mahabaleshwar, Maharashtra, Western Ghats. -------------------------------------------------IJLSSR----------------------------------------------- INTRODUCTION The black mildew fungi are very specialized in their Some of the researchers contributed certain number of structures and habitat. These are inconspicuous, mostly these fungi from Maharashtra state [10-27]. Hence, this foliicolous, superficial, obligate parasites, host specific and group of fungi attract the attention for extensive exploration characterized by appressoriate filamentous mycelium and investigation from Maharashtra state.