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Assessment of Plant Diversity for Threat Elements: a Case Study of Nargu Wildlife Sanctuary, North Western Himalaya
Ceylon Journal of Science 46(1) 2017: 75-95 DOI: http://doi.org/10.4038/cjs.v46i1.7420 RESEARCH ARTICLE Assessment of plant diversity for threat elements: A case study of Nargu wildlife sanctuary, north western Himalaya Pankaj Sharma*, S.S. Samant and Manohar Lal G.B. Pant National Institute of Himalayan Environment and Sustainable Development, Himachal Unit, Mohal- Kullu-175126, H.P., India Received: 12/07/2016; Accepted: 16/02/2017 Abstract: Biodiversity crisis is being experienced losses, over exploitation, invasions of non-native throughout the world, due to various anthropogenic species, global climate change (IUCN, 2003) and and natural factors. Therefore, it is essential to disruption of community structure (Novasek and identify suitable conservation priorities in biodiversity Cleland, 2001). As a result of the anthropogenic rich areas. For this myriads of conservational pressure, the plant extinction rate has reached approaches are being implemented in various ecosystems across the globe. The present study has to137 species per day (Mora et al., 2011; Tali et been conducted because of the dearth of the location- al., 2015). At present, the rapid loss of species is specific studies in the Indian Himalayas for assessing estimated to be between 1,000–10,000 times the ‘threatened species’. The threat assessment of faster than the expected natural extinction rate plant species in the Nargu Wildlife Sanctuary (NWS) (Hilton-Taylor, 2000). Under the current of the northwest Himalaya was investigated using scenario, about 20% of all species are likely to Conservation Priority Index (CPI) during the present go extinct within next 30 years and more than study. -
Establishment of a Global Network for the in Situ Conservation of Crop Wild Relatives: Status and Needs
THEMATIC BACKGROUND STUDY Establishment of a Global Network for the In Situ Conservation of Crop Wild Relatives: Status and Needs Nigel Maxted and Shelagh Kell BACKGROUND STUDY PAPER NO. 39 October 2009 COMMISSION ON GENETIC RESOURCES FOR FOOD AND AGRICULTURE ESTABLISHMENT OF A GLOBAL NETWORK FOR THE IN SITU CONSERVATION OF CROP WILD RELATIVES: STATUS AND NEEDS by *By Nigel Maxted and Shelagh Kell The content of this document is entirely the responsibility of the authors, and does not .necessarily represent the views of the FAO, or its Members 2 * School of Biosciences, University of Birmingham. Disclaimer The content of this document is entirely the responsibility of the authors, and does not necessarily represent the views of the Food and Agriculture Organization of the United Nations (FAO), or its Members. The designations employed and the presentation of material do not imply the expression of any opinion whatsoever on the part of FAO concerning legal or development status of any country, territory, city or area or of its authorities or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed by FAO in preference to others of a similar nature that are not mentioned. CONTENTS SUMMARY 6 ACKNOWLEDGEMENTS 7 PART 1: INTRODUCTION 8 1.1 Background and scope 8 1.2 The global and local importance of crop wild relatives 10 1.3 Definition of a crop wild relative 12 1.4 Global numbers of crop -
The Evolutionary Dynamics of Genes and Genomes: Copy Number Variation of the Chalcone Synthase Gene in the Context of Brassicaceae Evolution
The Evolutionary Dynamics of Genes and Genomes: Copy Number Variation of the Chalcone Synthase Gene in the Context of Brassicaceae Evolution Dissertation submitted to the Combined Faculties for Natural Sciences and for Mathematics of the Ruperto-Carola University of Heidelberg, Germany for the degree of Doctor of Natural Sciences presented by Liza Paola Ding born in Mosbach, Baden-Württemberg, Germany Oral examination: 22.12.2014 Referees: Prof. Dr. Marcus A. Koch Prof. Dr. Claudia Erbar Table of contents INTRODUCTION ............................................................................................................. 18 1 THE MUSTARD FAMILY ....................................................................................... 19 2 THE TRIBAL SYSTEM OF THE BRASSICACEAE ........................................... 22 3 CHALCONE SYNTHASE ........................................................................................ 23 PART 1: TROUBLE WITH THE OUTGROUP............................................................ 27 4 MATERIAL AND METHODS ................................................................................. 28 4.1 Experimental set-up ......................................................................................................................... 28 4.1.1 Plant material and data composition .............................................................................................. 28 4.1.2 DNA extraction and PCR amplification ........................................................................................ -
BRITISH BOTANICAL GARDENS in the 1980S
BRITISH BOTANICAL GARDENS IN THE 1980s: CHANGES REFLECTED BY BIBLIOGRAPHICAL AND SOCIAL SURVEY Enid Constance Gilberthorpe Thesis submitted fox' the degree of PhD University of Sheffield Division of Education January 1987 cONTEN'rs PAGE NUMBER List of Contents :1. List of Illustrations 111 Acknowledgements iv Summary vi CHAPTER I INTRODUCTION: AIMS AND SCOPE I 2 KEY DOCUMENTS 27 3 PLANTS FOR TEACHING, AND FOR RESEARCH: 42 teaching of botany; supplies of plant material; research into taxonomy; experimental botany 4 ECONOMIC BOTANY - plants with domestic 57 and medicinal uses and of commercial importance 5 HORTICULTURE: the acquisition and 74 cultivation of plants in botanical gardens 6 AMENITY: plants for pleasure and 97 interest 7 PUBLIC INFORMATION AND EDUCATION ilk SERVICES; PUBLIC RECREATION FACILITIES 1. CHAPTER PAGE NUMBER 8 CONSERVATION: wild and cultivated 139 plants in danger 9 BOTANICAL GARDENS OPEN TO THE PUBLIC; 188 GUIDES TO THE GARDENS - PRINTED PUBLICITY; ILLUSTRATIONS FROM THE GUIDE S 10 FUNCTIONS OF GARDENS - THE PROBLEM 220 OF OVERLAP 11 SHEFFIELD BOTANICAL GARDENS 242 12 BOTANICAL GARDENS IN BRITISH 'TWINNED' 2.7 TOWNS - ANY INTERACTION WITH THEIR EUROPEAN PARTNERS? 13 PUBLIC VIEWS ON BOTANICAL GARDENS - 287 A SAMPLE SURVEY 14 GARDENS NOW AND IN THE FUTURE - 294 POSSIBLE DEVELOPMENTS BIBLIOGRAPHY 328 ILLUSTRATIONS (between pages 219 and 220) National 1. Edinburgh Royal Botanic Garden: Rock Garden Pond. 2. Kew Royal Botanic Gardens: Palm House with spring bedding. 3. Westonbirt Arboretum (Forestry Commission): the memorial sarsen stone on Mitchell Drive. University L&. Cambridge University Botanic Garden: [view of Garden shown on front of folding leaflet]. 5. Ness Gardens (University of Liverpool): a late summer scene in the Heather Garden. -
Australian Orchidaceae: Genera and Species (12/1/2004)
AUSTRALIAN ORCHID NAME INDEX (21/1/2008) by Mark A. Clements Centre for Plant Biodiversity Research/Australian National Herbarium GPO Box 1600 Canberra ACT 2601 Australia Corresponding author: [email protected] INTRODUCTION The Australian Orchid Name Index (AONI) provides the currently accepted scientific names, together with their synonyms, of all Australian orchids including those in external territories. The appropriate scientific name for each orchid taxon is based on data published in the scientific or historical literature, and/or from study of the relevant type specimens or illustrations and study of taxa as herbarium specimens, in the field or in the living state. Structure of the index: Genera and species are listed alphabetically. Accepted names for taxa are in bold, followed by the author(s), place and date of publication, details of the type(s), including where it is held and assessment of its status. The institution(s) where type specimen(s) are housed are recorded using the international codes for Herbaria (Appendix 1) as listed in Holmgren et al’s Index Herbariorum (1981) continuously updated, see [http://sciweb.nybg.org/science2/IndexHerbariorum.asp]. Citation of authors follows Brummit & Powell (1992) Authors of Plant Names; for book abbreviations, the standard is Taxonomic Literature, 2nd edn. (Stafleu & Cowan 1976-88; supplements, 1992-2000); and periodicals are abbreviated according to B-P- H/S (Bridson, 1992) [http://www.ipni.org/index.html]. Synonyms are provided with relevant information on place of publication and details of the type(s). They are indented and listed in chronological order under the accepted taxon name. Synonyms are also cross-referenced under genus. -
Plant Collection and Herbarium Techniques
K. Maden / Our Nature (2004) 2:53-57 Plant Collection and Herbarium Techniques K. Maden Tribhuvan University Department of Botany Post Graduate Campus, Biratnagar, Nepal E-mail: [email protected] The collection of plants began in the 16 th clipper, heater. century. Later, J.P.Tourefort (ca 1700, France) v) firstaidbox, topographicmaps, computer, used the term herbarium for plants (Bridson binocular and Forman 1999). Plant collections are essentials for taxonomic researches because Collection procedure they serve as voucher specimens. They also Twig with good flowers need to be help to identify the family, genus and species. collected for the specimen. The portion of the So a herbarium is basically a storehouse of specimen should have to contain clear botanical specimens, which are arranged in the phyllotaxy and the branching system. For small sequence of an accepted classification system, herb, collection of more specimens as could and available for reference or other scientific fix on the herbarium sheet (up to six) is study. desirable. In general, secateurs are used to Once mounted and deposited in the cut the twigs, while for a bit height or down, herbarium, the collections are referred to as pruner is used, and for spiny specimens, such herbarium specimens. Such herbarium as Berberis mucrifolia, leather glove is specimens can be stored for many years and required. For ferns and herbs, digger is applied as such, they serve as: (i) historical collection, to take out underground portion. Some plants (ii) reference collection for checking the stem lies horizontally under the ground; for identity of newly collected plants, (iii) as an example, some Salix and Myricaria species. -
User Documentation for the Australian National Herbarium Specimen Information Register (ANHSIR)
1 User Documentation for the Australian National Herbarium Specimen Information Register (ANHSIR) Written by Julie Matarczyk Dataentry Co-ordinator, and Lee Halasz, Spatial Databaser, Australian National Herbarium Centre for Plant Biodiversity Research February 2004 Revised by Maggie Nightingale, Herbarium Registrar Nov 2009 Contents Introduction The five screens in ANHSIR: LABEL, EVENT, UNIT, ITEM and DET The Data Entry Screens: EVENT, UNIT, ITEM and DET The Query Screens: LABEL and EVENT Basic Data Entry – A single Herbarium Specimen The EVENT Screen The UNIT Screen The ITEM Screen The DET Screen Basic Data Entry – More than one sheet/item Basic Data Entry – Multiple items, not all herbarium sheets Data Entry from Field Notebooks Linking records Data Verification Common changes to CANB records: Common changes to CBG records: Linked Records Databasing Living Collections ANBG Living Collections Vouchers Advanced ANHSIR options Public Access Herbarium (Reference Herbarium) ‘duplicates’ Label Printing Geocoding – by Lee Halasz What is a geocode/Why calculate geocodes? Which regions to geocode Geocode accuracy and precision Geocoding resources Geocoding Hints Entering the Geocode Related Fields into ANHSIR Converting grid references to geocodes Troubleshooting… Advanced querying options Centre for Plant Biodiversity Research 2 P:\\ANH\ANH_Resources\Manuals\ANHSIRmanualversion6.doc (Nov 2009) List of Appendices Appendix 1: Function Keys Appendix 2: Useful Web Addresses Appendix 3: Precision codes/Source codes/Herb material codes/Gardens material codes Appendix 3A: Region codes used in ANHSIR Appendix 4: Geocode ready reckoner Appendix 5: Data-basing spirit (and fruit separate) collections with a dummy sheet. Appendix 6: Standard Abbreviations when Databasing Appendix 7: Donor institutes Frequently asked questions… Introduction: The Australian National Herbarium Specimen Information Register (ANHSIR) is a relational database built in Oracle to house information relating to the collections of the Australian National Herbarium (ANH). -
BOTANIC GARDEN CREATION and MANAGEMENT: the FEASIBILITY and DESIGN of NEW BRITISH COLLECTIONS [On-Line Edition]
BOTANIC GARDEN CREATION AND MANAGEMENT: THE FEASIBILITY AND DESIGN OF NEW BRITISH COLLECTIONS [On-line Edition] PhD Thesis University of Reading School of Plant Sciences James Furse-Roberts [email protected] June 2005 Abstract Introduction Chapter 1 - Overview of Botanic Gardens Chapter 2 - Survey of British Botanical Collections Chapter 3 - Case Studies of Selected Botanic Collections Chapter 4 - Discussion of Botanic Collections Elements Chapter 5 - Design & Interpretation Chapter 6 - Eden Project Case Study Chapter 7 - Market Research Chapter 8 - Carymoor Case Study Chapter 9 - Alternative Solutions Chapter 10 - Conclusion Bibliography Appendix Botanic Garden Creation & Management Chapter 3 1 2 3 Case Studies of Selected Botanic Collections The previous chapter concluded by outlining the characteristics of the nine types of collection identified by the results of the botanical collections survey and identified three methods by which the collections in these groups obtain the majority of their funding (1 - government or local council, 2 - affiliated organisation, 3 - visitor admissions or sales). This chapter will examine the hypothesis that a collection’s history and its method of funding affect its character and roles. 3.1 Methodology The information included in the case studies of the ten botanical collections covered in this chapter was compiled from a variety of sources. These include the information gathered through the botanical collections survey (chapter 2), written material, including that on the organisations own website, and interviews with present or past members of staff. When possible, interviews took place at the interviewee’s place of work and, on average, lasted for one hour. They were conducted using what Robson (2002) defines as the ‘unstructured interview’ technique. -
Automated Plant Species Identification— Trends and Future Directions
REVIEW Automated plant species identificationÐ Trends and future directions Jana WaÈldchen1*, Michael Rzanny1, Marco Seeland2, Patrick MaÈder2 1 Department of Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Jena, Thuringia, Germany, 2 Software Engineering for Safety-Critical Systems Group, Technische UniversitaÈt Ilmenau, Ilmenau, Thuringia, Germany * [email protected] a1111111111 a1111111111 a1111111111 Abstract a1111111111 a1111111111 Current rates of species loss triggered numerous attempts to protect and conserve biodiver- sity. Species conservation, however, requires species identification skills, a competence obtained through intensive training and experience. Field researchers, land managers, edu- cators, civil servants, and the interested public would greatly benefit from accessible, up-to- date tools automating the process of species identification. Currently, relevant technologies, OPEN ACCESS such as digital cameras, mobile devices, and remote access to databases, are ubiquitously Citation: WaÈldchen J, Rzanny M, Seeland M, available, accompanied by significant advances in image processing and pattern recogni- MaÈder P (2018) Automated plant species identificationÐTrends and future directions. PLoS tion. The idea of automated species identification is approaching reality. We review the tech- Comput Biol 14(4): e1005993. https://doi.org/ nical status quo on computer vision approaches for plant species identification, highlight the 10.1371/journal.pcbi.1005993 main research challenges to overcome in providing applicable tools, and conclude with a Editor: Alexander Bucksch, University of Georgia discussion of open and future research thrusts. Warnell School of Forestry and Natural Resources, UNITED STATES Published: April 5, 2018 Author summary Copyright: © 2018 WaÈldchen et al. This is an open Plant identification is not exclusively the job of botanists and plant ecologists. -
The World Checklist of Vascular Plants, a Continuously Updated
www.nature.com/scientificdata OPEN The World Checklist of Vascular DATA DescripTOR Plants, a continuously updated resource for exploring global plant diversity Rafaël Govaerts , Eimear Nic Lughadha ✉, Nicholas Black, Robert Turner & Alan Paton The World Checklist of Vascular Plants (WCVP) is a comprehensive list of scientifcally described plant species, compiled over four decades, from peer-reviewed literature, authoritative scientifc databases, herbaria and observations, then reviewed by experts. It is a vital tool to facilitate plant diversity research, conservation and efective management, including sustainable use and equitable sharing of benefts. To maximise utility, such lists should be accessible, explicitly evidence-based, transparent, expert-reviewed, and regularly updated, incorporating new evidence and emerging scientifc consensus. WCVP largely meets these criteria, being continuously updated and freely available online. Users can browse, search, or download a user-defned subset of accepted species with corresponding synonyms and bibliographic details, or a date-stamped full dataset. To facilitate appropriate data reuse by individual researchers and global initiatives including Global Biodiversity Information Facility, Catalogue of Life and World Flora Online, we document data collation and review processes, the underlying data structure, and the international data standards and technical validation that ensure data quality and integrity. We also address the questions most frequently received from users. Background & Summary Te World Checklist of Vascular Plants (WCVP, http://wcvp.science.kew.org/) is a sustainable, curated, global consensus view of all known vascular plant species (fowering plants, conifers, cycads, ferns, clubmosses and fr- mosses). It is derived from names and taxonomic concept resources managed at the Royal Botanic Gardens, Kew (hereafer Kew) by reconciling names to taxon concepts, to produce a comprehensive taxonomic compilation for vascular plants. -
Collection and Preparation of Vascular Plant Specimens James P
Humboldt State University Digital Commons @ Humboldt State University Botanical Studies Open Educational Resources and Data 2017 Collection and Preparation of Vascular Plant Specimens James P. Smith Jr Humboldt State University, [email protected] Follow this and additional works at: http://digitalcommons.humboldt.edu/botany_jps Part of the Botany Commons Recommended Citation Smith, James P. Jr, "Collection and Preparation of Vascular Plant Specimens" (2017). Botanical Studies. 12. http://digitalcommons.humboldt.edu/botany_jps/12 This Plant Taxonomy - Systematic Botany is brought to you for free and open access by the Open Educational Resources and Data at Digital Commons @ Humboldt State University. It has been accepted for inclusion in Botanical Studies by an authorized administrator of Digital Commons @ Humboldt State University. For more information, please contact [email protected]. COLLECTION AND PREPARATION OF VASCULAR PLANT SPECIMENS James P. Smith, Jr. Professor Emeritus of Botany Department of Biological Sciences Humboldt State University Arcata, California The principal reasons for collecting plants are to Notebook. There are several possibilities here – all the document their occurrence at a particular location and way from a small note pad that fits conveniently in a to provide permanent, representative specimens for shirt pocket or a steno pad to a notebook, waterproof future study. In the case of smaller vascular plants, field note book, or an electronic data storage device, such as annual herbs, the specimen often consists of such as a smart phone. one to several complete individuals. In larger plants, such as trees or shrubs, a specimen usually consists of Maps are needed to provide location data, such as road representative portions of vegetative and reproductive designations, names of counties, latitude and longitude, material. -
Automated Plant Species Identification—Trends and Future Directions
REVIEW Automated plant species identificationÐ Trends and future directions Jana WaÈldchen1*, Michael Rzanny1, Marco Seeland2, Patrick MaÈder2 1 Department of Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Jena, Thuringia, Germany, 2 Software Engineering for Safety-Critical Systems Group, Technische UniversitaÈt Ilmenau, Ilmenau, Thuringia, Germany * [email protected] a1111111111 a1111111111 a1111111111 Abstract a1111111111 a1111111111 Current rates of species loss triggered numerous attempts to protect and conserve biodiver- sity. Species conservation, however, requires species identification skills, a competence obtained through intensive training and experience. Field researchers, land managers, edu- cators, civil servants, and the interested public would greatly benefit from accessible, up-to- date tools automating the process of species identification. Currently, relevant technologies, OPEN ACCESS such as digital cameras, mobile devices, and remote access to databases, are ubiquitously Citation: WaÈldchen J, Rzanny M, Seeland M, available, accompanied by significant advances in image processing and pattern recogni- MaÈder P (2018) Automated plant species identificationÐTrends and future directions. PLoS tion. The idea of automated species identification is approaching reality. We review the tech- Comput Biol 14(4): e1005993. https://doi.org/ nical status quo on computer vision approaches for plant species identification, highlight the 10.1371/journal.pcbi.1005993 main research challenges to overcome in providing applicable tools, and conclude with a Editor: Alexander Bucksch, University of Georgia discussion of open and future research thrusts. Warnell School of Forestry and Natural Resources, UNITED STATES Published: April 5, 2018 Author summary Copyright: © 2018 WaÈldchen et al. This is an open Plant identification is not exclusively the job of botanists and plant ecologists.