Peer Reviewer Nominations Packet
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AAO of the FUTURE AAO of Next Generation Fibre Positioning Robots
IAU SPECIAL EDITION JULY 2003 NEWSLETTER ANGLO-AUSTRALIAN OBSERVATORY AAO OF THE FUTURE Next generation fibre positioning robots. Microrobotic technology based on the AAO’s Echidna system allows accurate positioning of payloads such as single fibres, guide bundles, mini- IFUs or even pick-off mirrors to be accurately positioned on large focal plates for large and ‘extremely large’ telescopes. See article on page 18. contents 3The Anglo-Australian Planet Search finDs a new “Solar System”-like gas giant (Chris Tinney et al.) 4RAVE hits the galaxy (FreD Watson et al.) 8A search for the highest reDshift raDio galaxies (Carlos De Breuck et al.) 9The 6DF Galaxy Survey (Will SaunDers et al.) 14 The end of observations for the 2dF Galaxy Redshift Survey (Matthew Colless et al.) 18 Directions for future instrumentation Development by the AAO (AnDrew McGrath et al.) 20 AAΩ: the successor to 2dF (Terry Bridges et al.) DIRECTOR’S MESSAGE DIRECTOR’S DIRECTOR’S MESSAGE On behalf of the staff of the Anglo-Australian Observatory, I would like to extend a warm welcome to Sydney to all IAU General Assembly delegates. This special GA edition of the AAO newsletter showcases some of the AAO’s achievements over the past year as well as some exciting new directions in which the AAO is heading in the future. Over the past few years the AAO has increasingly sought to build on its scientific and technical expertise through the design and building of astronomical instrumentation for overseas observatories, whilst maintaining its own telescopes as world-class facilities. The success of science programs such as the Anglo-Australian Planet Search and the 2dF Galaxy Redshift Survey amply demonstrate that the AAO is still facilitating the production of outstanding science by its user communities. -
Ploidetect Enables Pan-Cancer Analysis of the Causes and Impacts of Chromosomal Instability
bioRxiv preprint doi: https://doi.org/10.1101/2021.08.06.455329; this version posted August 8, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Ploidetect enables pan-cancer analysis of the causes and impacts of chromosomal instability Luka Culibrk1,2, Jasleen K. Grewal1,2, Erin D. Pleasance1, Laura Williamson1, Karen Mungall1, Janessa Laskin3, Marco A. Marra1,4, and Steven J.M. Jones1,4, 1Canada’s Michael Smith Genome Sciences Center at BC Cancer, Vancouver, British Columbia, Canada 2Bioinformatics training program, University of British Columbia, Vancouver, British Columbia, Canada 3Department of Medical Oncology, BC Cancer, Vancouver, British Columbia, Canada 4Department of Medical Genetics, Faculty of Medicine, Vancouver, British Columbia, Canada Cancers routinely exhibit chromosomal instability, resulting in tumors mutate, these variants are considerably more difficult the accumulation of changes in the abundance of genomic ma- to detect accurately compared to other types of mutations terial, known as copy number variants (CNVs). Unfortunately, and consequently they may represent an under-explored the detection of these variants in cancer genomes is difficult. We facet of tumor biology. 20 developed Ploidetect, a software package that effectively iden- While small mutations can be determined through base tifies CNVs within whole-genome sequenced tumors. Ploidetect changes embedded within aligned sequence reads, CNVs was more sensitive to CNVs in cancer related genes within ad- are variations in DNA quantity and are typically determined vanced, pre-treated metastatic cancers than other tools, while also segmenting the most contiguously. -
Professor Peter Goldreich Member of the Board of Adjudicators Chairman of the Selection Committee for the Prize in Astronomy
The Shaw Prize The Shaw Prize is an international award to honour individuals who are currently active in their respective fields and who have recently achieved distinguished and significant advances, who have made outstanding contributions in academic and scientific research or applications, or who in other domains have achieved excellence. The award is dedicated to furthering societal progress, enhancing quality of life, and enriching humanity’s spiritual civilization. Preference is to be given to individuals whose significant work was recently achieved and who are currently active in their respective fields. Founder's Biographical Note The Shaw Prize was established under the auspices of Mr Run Run Shaw. Mr Shaw, born in China in 1907, was a native of Ningbo County, Zhejiang Province. He joined his brother’s film company in China in the 1920s. During the 1950s he founded the film company Shaw Brothers (HK) Limited in Hong Kong. He was one of the founding members of Television Broadcasts Limited launched in Hong Kong in 1967. Mr Shaw also founded two charities, The Shaw Foundation Hong Kong and The Sir Run Run Shaw Charitable Trust, both dedicated to the promotion of education, scientific and technological research, medical and welfare services, and culture and the arts. ~ 1 ~ Message from the Chief Executive I warmly congratulate the six Shaw Laureates of 2014. Established in 2002 under the auspices of Mr Run Run Shaw, the Shaw Prize is a highly prestigious recognition of the role that scientists play in shaping the development of a modern world. Since the first award in 2004, 54 leading international scientists have been honoured for their ground-breaking discoveries which have expanded the frontiers of human knowledge and made significant contributions to humankind. -
Marc Corrales Berjano
Text in context: Chromatin effects in gene regulation Marc Corrales Berjano TESI DOCTORAL UPF / 2017 DIRECTOR DE LA TESI Dr. Guillaume Filion DEPARTAMENT Gene Regulation, Stem cells and Cancer Genome architecture Center for Genomic Regulation (CRG) ii a mi familia, iii Aknowledgements I want to thank the members of the doctoral board, present and substitutes, for accepting to analize my work and defend my thesis. I also want to thank my thesis commitee Dr. Miguel Beato, Dr. Jordi Garcia-Ojalvo and Dr. Tanya Vavouri for guidance and valuable scientific imput whenever I needed it along these years. I want to thank my mentor Dr. Guillaume Filion, not only for giving me the opportunity to carry this work in a wonderful environement, but for teaching me. No matter the tigh schedule he has allowed me to sit by his side (literally) reviewing a script at the computer, calculating the probaility of plasmid recircularization or deriving a statistical formula at the white board but also helping me to prepare and electroporate a bacterial library in what seemed a contraction of space-time. I want to thank the community of the CRG, always ready to discuss science and life in the corridors, the data seminars, symposiums, the beer sessions or following a mail asking for advice or materials. People at the administration helped enormously to navigate the tortuous bureaucratic world, maximizing the time one can dedicate toscience. ¡Dónde estaría yo sin tu puerta siempre abierta, Imma, madre en funciones de todo phD student! I want to thank the CRG for funding my phD and for constituting what I envisage as the perfect environment to learn to be a scientist. -
2019 Annual Report
BECKMAN CENTER 279 Campus Drive West Stanford, CA 94305 650.723.8423 Stanford University | Beckman Center 2019 Annual Report Annual 2019 | Beckman Center University Stanford beckman.stanford.edu 2019 ANNUAL REPORT ARNOLD AND MABEL BECKMAN CENTER FOR MOLECULAR AND GENETIC MEDICINE 30 Years of Innovation, Discovery, and Leadership in the Life Sciences CREDITS: Cover Design: Neil Murphy, Ghostdog Design Graphic Design: Jack Lem, AlphaGraphics Mountain View Photography: Justin Lewis Beckman Center Director Photo: Christine Baker, Lotus Pod Designs MESSAGE FROM THE DIRECTOR Dear Friends and Trustees, It has been 30 years since the Beckman Center for Molecular and Genetic Medicine at Stanford University School of Medicine opened its doors in 1989. The number of translational scientific discoveries and technological innovations derived from the center’s research labs over the course of the past three decades has been remarkable. Equally remarkable have been the number of scientific awards and honors, including Nobel prizes, received by Beckman faculty and the number of young scientists mentored by Beckman faculty who have gone on to prominent positions in academia, bio-technology and related fields. This year we include several featured articles on these accomplishments. In the field of translational medicine, these discoveries range from the causes of skin, bladder and other cancers, to the identification of human stem cells, from the design of new antifungals and antibiotics to the molecular underpinnings of autism, and from opioids for pain -
Chemistry NEWSLETTER
University of Michigan DEPARTMENT OF Chemistry NEWSLETTER Letter from the Chair Greetings from Ann Arbor and the chemical biology. In addition to these that Jim has done. He will be replaced by Department of Chemistry. After one full two outstanding senior hires, we welcome Professor Masato Koreeda. Professor year as Department Chair, I have come to Dr. Larry Beck from Cal Tech as the Dow Mark Meyerhoff will continue as Associ- realize the full scope of this administra- CorningAssistant Professor of analytical ate Chair for Graduate Student Affairs for tive challenge. It’s been a very busy and chemistry in September. Larry brings a another year after which he will take a exciting year as we forge ahead to meet broad spectrum of research expertise in well deserved sabbatical leave. the goals and implement the plans set out solid state NMR, zeolites and We have had another excellent year for in our new 5-year plan. nanostructures. Faculty recruiting will recruiting graduate students. In the fall, One of the most ambitious parts of our continue at a vigorous pace in the coming 45 new Ph.D. students will join the De- plan is the recruitment of new faculty at year with no less than four searches in the partment. This summer has also been a the senior and junior levels. During the area of theoretical physical chemistry, very productive one for undergraduate past year, Professor William Roush organic and chemical biology and inor- research participation with a total of 20 settled in the Department as the first ganic/materials chemistry. -
Course Number and Title: CAS AH 374 Australian Art and Architecture
Course Number and Title: CAS AH 374 Australian Art and Architecture Instructor/s Name/s: Peter Barnes Course Dates: Spring Semester, Fall Semester Office Location: BU Sydney Programs, Australia, a division of BU Study Abroad Course Time: Two sessions per week in accordance with class schedule: one session of 4 + hours and one session of 2 hours in a 7-8 week teaching half of a semester. Location: Classrooms, BU Sydney Academic Centre, Sydney, Australia, and multiple out-of-classroom field trips as scheduled, one of which is a 12 hour day long field trip outside the city to Canberra, Australia’s national capital and home to National Art Galleries, and Museums. Course Credits: 4 BU credits plus 2 BU Hub units Contact Information: [email protected] Office Hours: 15 minutes prior to and following course delivery or by appointment. TA/TF/Learning Assistant information, if relevant: 0 Principal Lecturers: Peter Barnes Guest Lecturers: Vary in accordance with available artists. One example is: Tom Carment, a working artist Question-driven Course Description: *How have European art traditions influenced the art practice of Australia’s indigenous peoples and how in turn has Aboriginal culture impacting the art of non-indigenous Australians? *The 18th century voyages to the southern ocean placed artists in a prominent role as practitioners of the new science of observation and experimentation promoted by the Royal Society. How does this differ from the idealist aesthetics of the Royal academy and what impact did this have on art in Australia during -
Finding the Radiation from the Big Bang
Finding The Radiation from the Big Bang P. J. E. Peebles and R. B. Partridge January 9, 2007 4. Preface 6. Chapter 1. Introduction 13. Chapter 2. A guide to cosmology 14. The expanding universe 19. The thermal cosmic microwave background radiation 21. What is the universe made of? 26. Chapter 3. Origins of the Cosmology of 1960 27. Nucleosynthesis in a hot big bang 32. Nucleosynthesis in alternative cosmologies 36. Thermal radiation from a bouncing universe 37. Detecting the cosmic microwave background radiation 44. Cosmology in 1960 52. Chapter 4. Cosmology in the 1960s 53. David Hogg: Early Low-Noise and Related Studies at Bell Lab- oratories, Holmdel, N.J. 57. Nick Woolf: Conversations with Dicke 59. George Field: Cyanogen and the CMBR 62. Pat Thaddeus 63. Don Osterbrock: The Helium Content of the Universe 70. Igor Novikov: Cosmology in the Soviet Union in the 1960s 78. Andrei Doroshkevich: Cosmology in the Sixties 1 80. Rashid Sunyaev 81. Arno Penzias: Encountering Cosmology 95. Bob Wilson: Two Astronomical Discoveries 114. Bernard F. Burke: Radio astronomy from first contacts to the CMBR 122. Kenneth C. Turner: Spreading the Word — or How the News Went From Princeton to Holmdel 123. Jim Peebles: How I Learned Physical Cosmology 136. David T. Wilkinson: Measuring the Cosmic Microwave Back- ground Radiation 144. Peter Roll: Recollections of the Second Measurement of the CMBR at Princeton University in 1965 153. Bob Wagoner: An Initial Impact of the CMBR on Nucleosyn- thesis in Big and Little Bangs 157. Martin Rees: Advances in Cosmology and Relativistic Astro- physics 163. -
Sugar Coated Sugar Has Become Notorious, with Countless Claims of Its Ill Effects on Health
HHMI BULLETIN N OV . ’11 VOL.24 • NO.04 • 4000 Jones Bridge Road Chevy Chase, Maryland 20815-6789 Hughes Medical Institute Howard www.hhmi.org Address Service Requested Sugar Coated Sugar has become notorious, with countless claims of its ill effects on health. But not all sugars are bad for you. Consider fucose, an essential sugar the body needs. Without it, neurons can’t communicate, kidneys can’t filter blood, and skin can’t stay hydrated. Chemical biologist Carolyn • Bertozzi and her group are trying to learn more about the role of fucose in www.hhmi.org development. To do this, they injected modified versions of fucose into live, single-celled zebrafish embryos. As the embryos developed, the altered fucose molecules were incorporated into the sugars that coat cell surfaces. Using a simple chemical reaction, the team attached a labeled probe molecule to the altered fucose so they could visualize its location in the developing embryo. In this image of a 19-hour-old zebrafish embryo, labeled fucose (red) glows in the peripheral cells. Just one of many ways chemistry is helping answer biological questions (see “Living Chemistry,” page 12). YEAR OF CHEMISTRY Chemists fascinated by the complexity of biology are solving problems in neuroscience, immunology, and cell signaling. v ol. 24 / no. no. / Karen Dehnert and Scott Laughlin / Bertozzi lab In This Issue: Traveling Microscope / Lemur vs Mouse / Spotlight on Science Teacher Training 04 ObservatiOns ThE GIvInG TREE The history of science overflows with captivating stories of break- Johann Kraut in 1869 and Hermann Kolbe in 1874, but then, unfortunately, throughs that led to innovative disease treatments. -
The Future of Cosmology 3
IL NUOVO CIMENTO Vol. ?, N. ? ? The Future of Cosmology George Efstathiou Institute of Astronomy, Madingley Road, Cambridge, CB3 OHA. England. Summary. — This article is the written version of the closing talk presented at the conference ‘A Century of Cosmology’ held at San Servolo, Italy, in August 2007. I focus on the prospects of constraining fundamental physics from cosmological observations, using the search for gravitational waves from inflation and constraints on the equation of state of dark energy as topical examples. I argue that it is important to strike a balance between the importance of a scientific discovery against the likelihood of making the discovery in the first place. Astronomers should be wary of embarking on large observational projects with narrow and speculative scientific goals. We should maintain a diverse range of research programmes as we move into a second century of cosmology. If we do so, discoveries that will reshape fundamental physics will surely come. 1. – Introduction It is a privilege to be invited to give the closing talk at this meeting celebrating ‘A Century of Cosmology’. I have taken the liberty of changing the title of the written version to make it shorter and snappier. Of course, I will not be able to cover all of arXiv:0712.1513v2 [astro-ph] 4 Jan 2008 cosmology and I am not a clairvoyant. What I will try to do is to review a small number of topics and use them as a guide to how our subject might develop. I am told that a good high court judge leaves everybody in the courtroom dissatisfied. -
Teri Melese, Ph.D
Prepared: 02/015 University of California, San Diego Curriculum Vitae Name: Teri Melese, Ph.D Current Position: UCSD Assistant Vice Chancellor, Industry Research Alliances Adjunct Associate Professor, Department of Medicine and Rady School of Management Last Position Held: Adjunct Associate Professor UCSF Department of Medicine, School of Medicine, 2005-2012 UCSF Dean’s Office: Director of Business Strategy and Development, School of Medicine UCSF Helen Diller Comprehensive Cancer Center Executive Committee: Associate Director for Strategic Alliances Address: University of California, San Diego Office of Research Affairs 9500 Gilman Drive #0910 La Jolla, CA 92093-0043 Tel: (858) 822-5247 mobile: (408) 373-3651 [email protected] Education: 1975-77 University of California, Berkeley A.B. Neurobiology/ Literature 1977-82 University of California, San Francisco Ph.D. Regents Fellow 1982-86 University of California, Los Angeles Postdoctoral Fellow Biochemistry 1986-87 University of California, Los Angeles American Cancer Sr. Research Fellow Molecular Biology Principal Positions Held: 1988-92 Columbia University, New York Assistant Professor Biological Sciences 1993-97 Columbia University, New York Associate Professor Biological Sciences 1997-99 Columbia University, New York Adjunct Associate Professor Biological Sciences 1997-01 Iconix Pharmaceuticals Mountain View Founding Member & Director Chemical Genomics 2001-2012 University of California, San Francisco Adjunct Full Professor Step II Medicine Present University of California, San Diego -
Molecular Chaperones in Cancer
CNIO - SPANISH”LA CAIXA”NATIONAL CANCER FOUNDATION RESEARCH CENTRE FRONTIERS MEETINGS 2017 Madrid 2nd- 4th May 2017 MOLECULAR CHAPERONES IN CANCER IN MEMORY OF SUSAN LINDQUIST Organisers Nabil Djouder Spanish National Cancer Research Centre (CNIO), Madrid, Spain Wilhelm Krek Institute for Molecular Health Sciences Zurich, Switzerland Paul Workman The Institute of Cancer Research London, UK Xiaohong Helena Yang Cancer Cell Cambridge, US EXCELENCIA MINISTERIO DE ECONOMÍA, INDUSTRIA SEVERO Y COMPETITIVIDAD OCHOA CNIO - SPANISH”LA CAIXA”NATIONAL CANCER FOUNDATION RESEARCH CENTRE FRONTIERS MEETINGS 2017 Madrid 2nd- 4th May 2017 MOLECULAR CHAPERONES IN CANCER CNIO - SPANISH”LA CAIXA”NATIONAL CANCER FOUNDATION RESEARCH CENTRE FRONTIERS MEETINGS 2017 Madrid 2nd- 4th May 2017 MOLECULAR CHAPERONES IN CANCER Summary 07 PROGRAMME 19 KEYNOTE LECTURE 23 SESSIONS 23 S #1 PROTEIN QUALITY CONTROL 31 S #2 FOLDING, MISFOLDING AND AGGREGATION 41 S #3 STRESS MECHANISMS IN CANCER 49 S #4 CHAPERONES IN CANCER 59 S #5 TARGETING CHAPERONES: CHAPERONOTHERAPY 67 CLOSING LECTURE 69 ORGANISERS AND SPEAKERS’ BIOGRAPHIES 99 POSTER SESSIONS 119 Previous CNIO Frontiers Meetings and CNIO Cancer Conferences 05 CNIO - SPANISH”LA CAIXA”NATIONAL CANCER FOUNDATION RESEARCH CENTRE FRONTIERS MEETINGS 2017 Madrid 2nd- 4th May 2017 MOLECULAR CHAPERONES IN CANCER PROGRAMME 07 PROGRAMME Madrid 2nd- 4th May 2017 MOLECULAR CHAPERONES IN CANCER Venue: Spanish National Cancer Research Centre – CNIO Auditorium, Madrid, Spain Chairpersons and organizing committee: Nabil Djouder, Spanish National Cancer Research Centre, Madrid, Spain Wilhelm Krek, Institute for Molecular Health Sciences, ETH, Zurich, Switzerland Paul Workman, The Institute of Cancer Research, London, UK Xiaohong Helena Yang, Cancer Cell, Cambridge, USA Rationale: Molecular chaperones play key roles in the folding, stability and activity of proteins in normal cell homeostasis and disease pa- thology, including cancer.