Screening of Fermentative Symbiotic Microorganisms from Digestive Tract of Macrotermes Subhyalinus and Macrotermes Bellicosus
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CUED Phd and Mphil Thesis Classes
High-throughput Experimental and Computational Studies of Bacterial Evolution Lars Barquist Queens' College University of Cambridge A thesis submitted for the degree of Doctor of Philosophy 23 August 2013 Arrakis teaches the attitude of the knife { chopping off what's incomplete and saying: \Now it's complete because it's ended here." Collected Sayings of Muad'dib Declaration High-throughput Experimental and Computational Studies of Bacterial Evolution The work presented in this dissertation was carried out at the Wellcome Trust Sanger Institute between October 2009 and August 2013. This dissertation is the result of my own work and includes nothing which is the outcome of work done in collaboration except where specifically indicated in the text. This dissertation does not exceed the limit of 60,000 words as specified by the Faculty of Biology Degree Committee. This dissertation has been typeset in 12pt Computer Modern font using LATEX according to the specifications set by the Board of Graduate Studies and the Faculty of Biology Degree Committee. No part of this dissertation or anything substantially similar has been or is being submitted for any other qualification at any other university. Acknowledgements I have been tremendously fortunate to spend the past four years on the Wellcome Trust Genome Campus at the Sanger Institute and the European Bioinformatics Institute. I would like to thank foremost my main collaborators on the studies described in this thesis: Paul Gardner and Gemma Langridge. Their contributions and support have been invaluable. I would also like to thank my supervisor, Alex Bateman, for giving me the freedom to pursue a wide range of projects during my time in his group and for advice. -
A Taxonomic Note on the Genus Lactobacillus
Taxonomic Description template 1 A taxonomic note on the genus Lactobacillus: 2 Description of 23 novel genera, emended description 3 of the genus Lactobacillus Beijerinck 1901, and union 4 of Lactobacillaceae and Leuconostocaceae 5 Jinshui Zheng1, $, Stijn Wittouck2, $, Elisa Salvetti3, $, Charles M.A.P. Franz4, Hugh M.B. Harris5, Paola 6 Mattarelli6, Paul W. O’Toole5, Bruno Pot7, Peter Vandamme8, Jens Walter9, 10, Koichi Watanabe11, 12, 7 Sander Wuyts2, Giovanna E. Felis3, #*, Michael G. Gänzle9, 13#*, Sarah Lebeer2 # 8 '© [Jinshui Zheng, Stijn Wittouck, Elisa Salvetti, Charles M.A.P. Franz, Hugh M.B. Harris, Paola 9 Mattarelli, Paul W. O’Toole, Bruno Pot, Peter Vandamme, Jens Walter, Koichi Watanabe, Sander 10 Wuyts, Giovanna E. Felis, Michael G. Gänzle, Sarah Lebeer]. 11 The definitive peer reviewed, edited version of this article is published in International Journal of 12 Systematic and Evolutionary Microbiology, https://doi.org/10.1099/ijsem.0.004107 13 1Huazhong Agricultural University, State Key Laboratory of Agricultural Microbiology, Hubei Key 14 Laboratory of Agricultural Bioinformatics, Wuhan, Hubei, P.R. China. 15 2Research Group Environmental Ecology and Applied Microbiology, Department of Bioscience 16 Engineering, University of Antwerp, Antwerp, Belgium 17 3 Dept. of Biotechnology, University of Verona, Verona, Italy 18 4 Max Rubner‐Institut, Department of Microbiology and Biotechnology, Kiel, Germany 19 5 School of Microbiology & APC Microbiome Ireland, University College Cork, Co. Cork, Ireland 20 6 University of Bologna, Dept. of Agricultural and Food Sciences, Bologna, Italy 21 7 Research Group of Industrial Microbiology and Food Biotechnology (IMDO), Vrije Universiteit 22 Brussel, Brussels, Belgium 23 8 Laboratory of Microbiology, Department of Biochemistry and Microbiology, Ghent University, Ghent, 24 Belgium 25 9 Department of Agricultural, Food & Nutritional Science, University of Alberta, Edmonton, Canada 26 10 Department of Biological Sciences, University of Alberta, Edmonton, Canada 27 11 National Taiwan University, Dept. -
Spatial Distribution and Density of Termite Mounds in a Protected Habitat in the South of Cote D’Ivoire: Case of National Floristic Center (Cnf) of Ufhb of Abidjan
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by European Scientific Journal (European Scientific Institute) European Scientific Journal January 2015 edition vol.11, No.3 ISSN: 1857 – 7881 (Print) e - ISSN 1857- 7431 SPATIAL DISTRIBUTION AND DENSITY OF TERMITE MOUNDS IN A PROTECTED HABITAT IN THE SOUTH OF COTE D’IVOIRE: CASE OF NATIONAL FLORISTIC CENTER (CNF) OF UFHB OF ABIDJAN Boga Jean-Pierre, PhD Assistant-Prof. Akpesse Akpa Alexandre Moise, PhD Assistant-Prof. Ouali-N’goran San-Whouli Mauricette, PhD Associate-Prof. Laboratory of Zoology and Animal Biology, UFR-Biosciences, Félix Houphouët-Boigny University of Abidjan, Côte d’Ivoire Trabi Crolaud Sylvain, PhD Assistant Laboratory of Animal Biology, UFR of agroforestery, Jean-Lourougnon Guédé University of Daloa, Côte d'Ivoire Kouassi Kouassi Philippe, PhD Prof. Tano Yao, PhD Prof. Yapi Ahoua, PhD Associate-Prof. Laboratory of Zoology and Animal Biology, UFR-Biosciences, Félix Houphouët-Boigny University of Abidjan, Côte d’Ivoire Abstract The spatial distribution and termite mounds density and their activity were studies in order to assess to the biological restoration level in a protected area, knowing that termites are considered as tropical ecosystem engineers. The CNF area was subdivided into 4 sectors (SW, SE, NW and NE). In every sector of 1.75 ha, 20 transects (5 m x 100 m) were sampled. Termite nests were counted. Their dimensions and geographical coordinates were recorded. The superposition of spatial distribution maps of the 3 types of termite mounds showed an impressive abundance of termite mounds in all CNF area. In total, there were recorded 165 termite mounds. -
Termite Communities Along a Disturbance Gradient in a West African Savanna
insects Article Termite Communities along A Disturbance Gradient in a West African Savanna Janine Schyra 1,* and Judith Korb 1,2 1 Behavioral Biology, University of Osnabrueck, Barbarastr. 11, D-49076 Osnabrueck, Germany; [email protected] 2 Evolution and Ecology, Albert-Ludwigs-University Freiburg, Hauptstr. 1, D-79104 Freiburg im Breisgau, Germany * Correspondence: [email protected] Received: 23 November 2018; Accepted: 30 December 2018; Published: 8 January 2019 Abstract: (1) Background: Termites are important ecosystem engineers, crucial for the maintenance of tropical biodiversity and ecosystem functioning. But they are also pests which cause billions of dollars in damage annually to humans. Currently, our understanding of the mechanisms influencing species occurrences is limited and we do not know what distinguishes pest from non-pest species. (2) Method: We analyzed how anthropogenic disturbance (agriculture) affects species occurrences. We tested the hypothesis that strong disturbance functions as a habitat filter and selects for a subset of species which are major pests of crop. Using a cross-sectional approach, we studied termite assemblage composition along a disturbance gradient from fields to 12-year-old fallows in a West African savanna. (3) Results: We reliably identified 19 species using genetic markers with a mean of about 10 species—many of them from the same feeding type—co-occurring locally. Supporting our hypothesis, disturbance was associated with environmental filtering of termites from the regional species pool, maybe via its effect on vegetation type. The most heavily disturbed sites were characterized by a subset of termite species which are well-known pests of crop. -
FUDMA Journal of Sciences (FJS) Vol. 4 No. 2, June, 2020, Pp 92 - 100 92 EFFECT of PHYSICO-CHEMICAL… Akpan, Et Al., FJS
FUDMA Journal of Sciences (FJS) EFFECT OF PHYSICO-CHEMICAL… ISSNAkpan, online: et al., 2616 -1370 FJS ISSN print: 2645 - 2944 Vol. 4 No. 2, June, 2020, pp 92 -100 DOI: https://doi.org/10.33003/fjs -2020-0402-206 EFFECT OF PHYSICO-CHEMICAL PARAMETERS ON THE ABUNDANCE AND DIVERSITY OF TERMITES AND OTHER ARTHROPODS IN TERMITE MOUNDS IN UYO, AKWA IBOM STATE, NIGERIA. *1Akpan, Akaninyene Udoh, 2Ojianwuna, Chioma Cynthia, 1Ubulom, Peace Mayen Edwin, 1Clement Ameh Yaro, 1Oboho, Diligent Efiong. 1Entomology Unit – Department of Animal and Environmental Biology, University of Uyo, Uyo, Akwa Ibom State, Nigeria. 2Department of Animal and Environmental Biology, Delta State University, Abraka. Delta State. Nigeria *Corresponding author e-mail: [email protected] ABSTRACT Termites are generally regarded as pests, although they have some beneficial roles to play in the ecosystem, particularly in the soil. This study was conducted between January 2018 and April 2018, to determine the effect of physico-chemical parametrs on abundance and diversity of termites and other arthropods in termite mounds in Uinversity of Uyo Community. Soil samples were randomly collected from six termite mounds from two sites for physiochemical parameters analysis and these were temperature, pH, moisture content, nitrogen, phosphorus, magnesium, copper, sodium, potassium, manganese and iron.. The termites and other arthropods were preserved in 70% ethanol. Temperature and moisture content, copper, sodium and iron were significant. The results revealed that the physicochemical parameters affected the termite species abundance as station 1 (539) had relatively more of the termite species than station 2 (551), and also affected the diversity of the termites as station 1 (0.89) had relatively more diversity of the termites than station 2 (0.66). -
Activity of Mound-Building Macrotermes Bellicosus
Animal Research International (2018) 15(1): 2918 – 2925 2918 ACTIVITY OF MOUND - BUILDING MACROTERMES BELLICOSUS (ISOPTERA: TERMITIDAE) AROUND KWARA STATE UNIVERSITY CAMPUS GUINEA SAVANNAH ECOZONE, NIGERIA 1 AJAO, Adeyemi Mufutau, 2 OLADIMEJI, Yusuf Usman, 1 OLADIPO, Segun Olayinka and 1 ADEPOJU, Suraju Adeshina 1 Department of Bioscience and Biotechnology, Kwara State University, Malete, Kwara State, Nigeria. 2 Department of Agricultural Economics and Rural Sociology, Ahmadu Bello University, PMB 1044 , Zaria, Kaduna State, Nigeria . Corresponding Author: Ajao, A. M. Department of Bioscience and Biotechnology, Kwara State University, Malete, Kwara State, Nigeria. Email : [email protected] Phone: +234 8035058904 ABSTRACT This study was designed to investigate Macrotermes bellicosus , nes ting mounds, abundance and activity in the savannah ecological zone of Kwara State, North - Central, Nigeria. The research was conducted at four randomly selected villages around and including Kwara S tate U niversity. A systematic survey of visible mounds of M. bellicosus was carried out over the entire study area. Also, the heights of mounds were measured using a measuring tape. M. bellicosus collection was conducted using bait ed traps consisting of cardboard, toilet tissue, wooden stakes and wood shaving . These were embedded or placed on ground within plots at a regular distance of 10 m and checked twice weekly. The samples collected per bait ed trap per plot per location were pre served in 90 % ethanol and identified. Similarly, survey of physically damaged items was conducted and recorded to observe termite activity. The result from the four diff erent locations of the study show ed that the number of M. -
Development and Role of the Indigenous Gut Microbiota Of
Development and role of the indigenous gut microbiota of Spodoptera littoralis Dissertation To Fulfill the Requirements for the Degree of ,,doctor rerum naturalium“ (Dr. rer. nat.) Submitted to the Council of the Faculty of Biology and Pharmacy of the Friedrich Schiller University Jena by Beng-Soon Teh (M.Sc) born on 12.02.1985 in Penang, Malaysia Gutachter: 1. …. 2. …. 3. …. Tag der öffentlichen Verteidigung: Fluorescent GFP-tagged Enterococcus mundtii TABLE of CONTENTS Abbreviations and symbols 1. Introduction .......................................................................................................... 1 1.1 Host-microbiota symbiosis interactions ........................................................... 1 1.1.1 Insect-bacteria symbiosis interactions ........................................................ 2 1.2 Physiological conditions and stresses in the gut environment of insects ......... 3 1.3 Contributions of the gut microbiome ................................................................ 5 1.4 Diversity of the gut microbiota in insects ......................................................... 6 1.5 Model organism: Spodoptera littoralis ............................................................. 9 1.6 The physiology of lactic acid bacteria ............................................................ 10 1.6.1 General characteristics of enterococci ...................................................... 11 1.7 Colonization of enterococci in insects ............................................................ 14 -
Changes in Composition of Culturable Bacteria Community in the Gut of the Formosan Subterranean Termite Depending on Rearing Conditions of the Host
ARTHROPOD BIOLOGY Changes in Composition of Culturable Bacteria Community in the Gut of the Formosan Subterranean Termite Depending on Rearing Conditions of the Host 1 2 3 C. HUSSENEDER, J. M. BERESTECKY, AND J. K. GRACE Ann. Entomol. Soc. Am. 102(3): 498Ð507 (2009) Downloaded from https://academic.oup.com/aesa/article/102/3/498/8634 by guest on 23 September 2021 ABSTRACT The hindgut of feeding termites that feed on wood and litter contains a diverse population of bacteria and protists that contribute to the carbon, nitrogen, and energy requirements of the termite. For understanding the ecological balance in the termite gut, detailed knowledge about the composition of the microbial gut ßora is imperative, i.e., the numbers and relative proportions of the microbial taxa and the variability in the microbial composition among different termite colonies and living conditions of termites should be described. Therefore, we isolated and enumerated eight bacterial morphotypes from the gut of the Formosan subterranean termite, Coptotermes formosanus Shiraki. Five morphotypes (three isolates of lactic acid bacteria, isolates of the family Enterobacte- riaceae and isolates belonging to the genus Dysgonomonas) were found frequently in all termite colonies. Three additional morphotypes were found sporadically and were considered to be transient ßora. We compared the proportions of the three lactic acid bacteria isolates and the Enterobacte- riaceae among three different termite colonies. Furthermore, we investigated the shift in proportions of these four major morphotypes depending on whether bacteria were isolated from freshly collected termites or from termites reared in the laboratory under seminatural conditions (in arenas on wood) or artiÞcial conditions (in petri dishes on Þlter paper). -
Smeathman) (Blattodea: Termitidae
BIOPESTICIDAL POTENTIAL OF EXTRACTS OF TWO PLANTS AGAINST SUBTERRANEAN TERMITES, MACROTERMES BELLICOSUS (SMEATHMAN) (BLATTODEA: TERMITIDAE). BY ADEDARA, WASOLA (BIO/08/4489) A THESIS IN THE DEPARTMENT OF BIOLOGY SUBMITTED TO THE SCHOOL OF POSTGRADUATE STUDIES, FEDERAL UNIVERSITY OF TECHNOLOGY, AKURE, ONDO STATE, NIGERIA. IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE AWARD OF MASTER OF TECHNOLOGY (M.TECH) DEGREE IN BIOLOGY (ENVIRONMENTAL BIOLOGY AND PUBLIC HEALTH OPTION), FEDERAL UNIVERSITY OF TECHNOLOGY, AKURE, ONDO STATE, NIGERIA. AUGUST, 2018. ABSTRACT Termites are important because their activities impact positively or negatively on the environment. Synthetic insecticides offer reasonable protection against termites and their uses are however not without problems. This has led to an increasing interest in the development of alternative termite control methods and plants with pesticidal properties are one of such alternatives. The bioactivity of Milicia excelsa (Welm) C. Berg (heart wood) and Khaya senegalensis (Desr) (leaves) were tested in protecting Triplochiton scleroxylon (Schum) against subterranean termites. The extracts were analyzed using Head Space – Solid Phase Micro Extraction (HS-SPME) coupled with Gas Chromatography – Mass Spectrometry (GC-MS) to reveal their profiles of compounds, which were evaluated for termiticidal effects against Macrotermes bellicosus (Smearthman) in wood protection. The pulverized plants were used for laboratory test. Toxicity and repellency tests were carried out in laboratory while assessment of wood damage (visual rating and weight loss) was conducted in the field. The laboratory results showed that, highest mortality of termites, 98%, was recorded in M. excelsa treated substrate at 72 h. Student t-Test revealed significant differences between termite mortality obtained with the powder of K. -
Recherche De Bactéries Lactiques Autochtones Capables De Mener La Fermentation De Fruits Tropicaux Avec Une Augmentation De L’Activité Antioxydante
THÈSE Pour l’obtention du titre de Docteur de l’Université de La Réunion Spécialité : Agroalimentaire, Biotechnologies alimentaires et Sciences des aliments Recherche de bactéries lactiques autochtones capables de mener la fermentation de fruits tropicaux avec une augmentation de l’activité antioxydante Par Amandine FESSARD Soutenue publiquement le 27 Novembre 2017 Composition du jury : Dr. M-C CHAMPOMIER-VERGES Directrice de recherche, INRA Rapporteur Pr. Emmanuel COTON Professeur, Université de Bretagne Rapporteur Dr. Christine ROBERT DA SILVA Maître de conférences, Université de la Réunion Examinatrice Pr. Theeshan BAHORUN Professeur, Université de Maurice Examinateur Pr. Fabienne REMIZE Professeur, Université de la Réunion Directrice Pr Emmanuel BOURDON Professeur, Université de la Réunion Co-directeur A Fabrice et à ma famille… Remerciements Ces travaux de thèse ont été réalisés au sein de l’UMR QUALISUD (UMR C-95, Université de La Réunion, CIRAD, Université de Montpellier, Montpellier SupAgro, Université d’Avignon et des Pays de Vaucluse), dirigé par Monsieur Dominique PALLET et ont été financés par la Région Réunion et les fonds Européens (FEDER). Je tiens à adresser à la Région Réunion mes plus sincères remerciements pour l’obtention de cette allocation de recherche et de m’avoir permis de réaliser ce travail pendant trois ans. A Monsieur Dominique PALLET, Je vous remercie de m’avoir accueilli au sein de votre UMR QUALISUD et de m’avoir donné un avis favorable pour mon recrutement en tant qu’ATER. A Madame Fabienne REMIZE, Fabienne, je te remercie du fond du cœur d’avoir excellement dirigé ces travaux de thèse, de m’avoir enseigné tout ce que tu sais sur les bactéries lactiques et la fermentation pendant presque 4 ans. -
M a Y 2 1 - 2 4
M A Y 2 1 - 2 4 EMBASSY SUITES HOTEL RALEIGH - D U R H A M • N C Table of Contents National Conference on Urban Entomology May 21-24, 2006 Embassy Suites Hotel Raleigh-Durham, North Carolina DISTINGUISHED ACHIEVEMENT AWARD IN URBAN ENTOMOLOGY ................... 10 ARNOLD MALLIS MEMORIAL AWARD LECTURE: THE GERMAN COCKROACH: RE-EMERGENCE OF AN OLD FOE…THAT NEVER DEPARTED Coby Schal, North Carolina State University................................................................. 10 STUDENT SCHOLARSHIP AWARD PRESENTATIONS ............................................ 11 SOYBEAN OIL CONSUMPTION IN RED IMPORTED FIRE ANTS, SOLENOPSIS INVICTA BUREN (HYMENOPTERA: FORMICIDAE) Rebecca L. Baillif, Dr. Linda Hooper-Bùi, and Dr. Beverly A. Wiltz, Louisiana State University ...................................................................................................................... 11 THE RESPONSE OF THE FORMOSAN SUBTERRANEAN TERMITE TO DIFFERENT BORATE SALTS Margaret C. Gentz and J. Kenneth Grace, University of Hawai`i at Manoa .................. 11 THE MECHANISM AND FACTORS AFFECTING HORIZONTAL TRANSFER OF FIPRONIL AMONG WESTERN SUBTERRANEAN TERMITES Raj K. Saran and Michael K. Rust, University of California Riverside ........................... 12 STUDENT PAPER COMPETITION .............................................................................. 16 COMPARATIVE PROTEOMICS BETWEEN WORKER AND SOLDIER CASTES OF RETICULITERMES FLAVIPES (ISOPTERA: RHINOTERMITIDAE) C. Jerry Bowen, Robin D. Madden, Brad Kard, and Jack W. Dillwith, Oklahoma State -
Using Oxygen and Biopreservation As Hurdles to Improve Safety Of
USING OXYGEN AND BIOPRESERVATION AS HURDLES TO IMPROVE SAFETY OF COOKED FOOD DURING STORAGE AT REFRIGERATION TEMPERATURES By NYDIA MUNOZ A dissertation submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY WASHINGTON STATE UNIVERSITY Department of Biological Systems Engineering MAY 2018 © Copyright by NYDIA MUNOZ, 2018 All Rights Reserved © Copyright by NYDIA MUNOZ, 2018 All Rights Reserved To the Faculty of Washington State University: The members of the Committee appointed to examine the dissertation of NYDIA MUNOZ find it satisfactory and recommend that it be accepted. Shyam Sablani, Ph.D., Chair Juming Tang, Ph.D. Gustavo V. Barbosa-Cánovas, Ph.D. ii ACKNOWLEDGMENT My special gratitude to my advisor Dr. Shyam Sablani for taking me as one his graduate students and supporting me through my Ph.D. study and research. His guidance helped me in all the time of research and writing of this thesis. At the same time, I would like to thank my committee members Dr. Juming Tang and Dr. Gustavo V. Barbosa-Cánovas for their valuable suggestions on my research and allowing me to use their respective laboratories and instruments facilities. I am grateful to Mr. Frank Younce, Mr. Peter Gray and Ms. Tonia Green for training me in the use of relevant equipment to conduct my research, and their technical advice and practical help. Also, the assistance and cooperation of Dr. Helen Joyner, Dr. Barbara Rasco, and Dr. Meijun Zhu are greatly appreciated. I am grateful to Dr. Kanishka Buhnia for volunteering to carry out microbiological counts by my side as well as his contribution and critical inputs to my thesis work.