From a Fossil to a Robot…And All the Steps in Between 1 2 by Kamilo Melo | Scientist; John A
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Morphology, Phylogeny, and Evolution of Diadectidae (Cotylosauria: Diadectomorpha)
Morphology, Phylogeny, and Evolution of Diadectidae (Cotylosauria: Diadectomorpha) by Richard Kissel A thesis submitted in conformity with the requirements for the degree of doctor of philosophy Graduate Department of Ecology & Evolutionary Biology University of Toronto © Copyright by Richard Kissel 2010 Morphology, Phylogeny, and Evolution of Diadectidae (Cotylosauria: Diadectomorpha) Richard Kissel Doctor of Philosophy Graduate Department of Ecology & Evolutionary Biology University of Toronto 2010 Abstract Based on dental, cranial, and postcranial anatomy, members of the Permo-Carboniferous clade Diadectidae are generally regarded as the earliest tetrapods capable of processing high-fiber plant material; presented here is a review of diadectid morphology, phylogeny, taxonomy, and paleozoogeography. Phylogenetic analyses support the monophyly of Diadectidae within Diadectomorpha, the sister-group to Amniota, with Limnoscelis as the sister-taxon to Tseajaia + Diadectidae. Analysis of diadectid interrelationships of all known taxa for which adequate specimens and information are known—the first of its kind conducted—positions Ambedus pusillus as the sister-taxon to all other forms, with Diadectes sanmiguelensis, Orobates pabsti, Desmatodon hesperis, Diadectes absitus, and (Diadectes sideropelicus + Diadectes tenuitectes + Diasparactus zenos) representing progressively more derived taxa in a series of nested clades. In light of these results, it is recommended herein that the species Diadectes sanmiguelensis be referred to the new genus -
Curriculum Vitae
CURRICULUM VITAE AMY C. HENRICI Collection Manager Section of Vertebrate Paleontology Carnegie Museum of Natural History 4400 Forbes Avenue Pittsburgh, Pennsylvania 15213-4080, USA Phone:(412)622-1915 Email: [email protected] BACKGROUND Birthdate: 24 September 1957. Birthplace: Pittsburgh. Citizenship: USA. EDUCATION B.A. 1979, Hiram College, Ohio (Biology) M.S. 1989, University of Pittsburgh, Pennsylvania (Geology) CAREER Carnegie Museum of Natural History (CMNH) Laboratory Technician, Section of Vertebrate Paleontology, 1979 Research Assistant, Section of Vertebrate Paleontology, 1980 Curatorial Assistant, Section of Vertebrate Paleontology, 1980-1984 Scientific Preparator, Section of Paleobotany, 1985-1986 Scientific Preparator, Section of Vertebrate Paleontology, 1985-2002 Acting Collection Manager/Scientific Preparator, 2003-2004 Collection Manager, 2005-present PALEONTOLOGICAL FIELD EXPERIENCE Late Pennsylvanian through Early Permian of Colorado, New Mexico and Utah (fish, amphibians and reptiles) Early Permian of Germany, Bromacker quarry (amphibians and reptiles) Triassic of New Mexico, Coelophysis quarry (Coelophysis and other reptiles) Upper Jurassic of Colorado (mammals and herps) Tertiary of Montana, Nevada, and Wyoming (mammals and herps) Pleistocene of West Virginia (mammals and herps) Lake sediment cores and lake sediment surface samples, Wyoming (pollen and seeds) PROFESSIONAL APPOINTMENTS Associate Editor, Society of Vertebrate Paleontology, 1998-2000. Research Associate in the Science Division, New Mexico Museum of Natural History and Science, 2007-present. PROFESSIONAL ASSOCIATIONS Society of Vertebrate Paleontology Paleontological Society LECTURES and TUTORIALS (Invited and public) 1994. Middle Eocene frogs from central Wyoming: ontogeny and taphonomy. California State University, San Bernardino 1994. Mechanical preparation of vertebrate fossils. California State University, San Bernardino 1994. Mechanical preparation of vertebrate fossils. University of Chicago 2001. -
Frequently Asked Questions Reverse-Engineering the Locomotion of a Stem Amniote John A
Frequently Asked Questions Reverse-engineering the locomotion of a stem amniote John A. Nyakatura, Kamilo Melo, Tomislav Horvat, Kostas Karakasiliotis, Vivian R. Allen, Amir Andikfar, Emanuel Andrada, Patrick Arnold, Jonas Lauströer, John R. Hutchinson, Martin S. Fischer and Auke J. Ijspeert. Nature 565, 351–355; 2019. Why was a robot useful for this study? 2 Why is Orobates important? 2 Why do you use the term reverse engineering? 2 Who Funded the project? 2 Where was Orobates found? 2 Where could this method or research be taken in the future? 2 What were some of the considerations that came into play as you reconstructed the way this animal walked? 3 What was the most surprising finding in this work? 3 What made Orobates such a good candidate for this kind of analysis? 3 What is new compared to other projects involving simulations or robots? 3 What is a stem amniote? 3 What does the term ‘stem’ mean? 3 What does the term “advanced locomotion” in the context of the study mean? 4 What do the terms amniote and anamniote mean? 4 What did you learn that you didn't know before? 4 What are the dimensions of the OroBot? 4 Were you surprised at the result that Orobates had a more "advanced" locomotion? 4 How was it possible to link the fossil trackways to the body fossil of Orobates? 4 How useful is this work to other fields? 4 How long did the project take and who was involved? 5 How expensive is the robot? 5 How did you validate your simulations? 5 Have there been similar robotic or simulation studies of fossils before? Can you give some examples? 5 Is Orobates older than dinosaurs? 6 Can the robot swim? 6 Can OroBOT be used to study other extinct animals as well? 6 1 Why was a robot useful for this study? Our robotic model allowed us to test our hypotheses about the animal’s locomotion dynamics, otherwise elusive to explore in an extinct animal. -
Tracks and Evolution of Locomotion in the Sistergroup of Amniotes
A peer-reviewed version of this preprint was published in PeerJ on 31 January 2018. View the peer-reviewed version (peerj.com/articles/4346), which is the preferred citable publication unless you specifically need to cite this preprint. Buchwitz M, Voigt S. 2018. On the morphological variability of Ichniotherium tracks and evolution of locomotion in the sistergroup of amniotes. PeerJ 6:e4346 https://doi.org/10.7717/peerj.4346 On the morphological variability of Ichniotherium tracks and evolution of locomotion in the sistergroup of amniotes Michael Buchwitz Corresp., 1 , Sebastian Voigt Corresp. 2 1 Museum für Naturkunde Magdeburg, Magdeburg, Germany 2 Urweltmuseum Geoskop, Kusel, Germany Corresponding Authors: Michael Buchwitz, Sebastian Voigt Email address: [email protected], [email protected] Ichniotherium tracks with a relatively short pedal digit V (digit length ratio V/IV < 0.6) form the majority of yet described Late Carboniferous to Early Permian diadectomorph tracks and can be related to a certain diadectid clade with corresponding phalangeal reduction that includes Diadectes and its close relatives. Here we document the variation of digit proportions and trackway parameters in 25 trackways (69 step cycles) from nine localities and seven further specimens with incomplete step cycles from the type locality of Ichniotherium cottae (Gottlob quarry) in order to find out whether this type of Ichniotherium tracks represents a homogeneous group or an assemblage of distinct morphotypes and includes variability indicative for evolutionary change in trackmaker locomotion. According to our results, the largest sample of tracks from three Lower Permian sites of the Thuringian Forest, commonly referred to Ichniotherium cottae, is not homogeneous but shows a clear distinction in pace length, pace angulation, apparent trunk length and toe proportions between tracks from Bromacker quarry and those from the stratigraphically older sites Birkheide and Gottlob quarry. -
Inner Ear Morphology of Diadectomorphs And
Palaeontology INNER EAR MORPHOLOGY OF DIADECTOMORPHS AND SEYMOURIAMORPHS (TETRAPODA) UNCOVERED BY HIGH- RESOLUTION X-RAY MICROCOMPUTED TOMOGRAPHY, AND THE ORIGIN OF THE AMNIOTE CROWN-GROUP Journal: Palaeontology Manuscript ID PALA-01-19-4428-OA.R1 Manuscript Type: Original Article Date Submitted by the 22-May-2019 Author: Complete List of Authors: Klembara, Jozef; Univerzita Komenskeho v Bratislave, Department of Ecology Hain, Miroslav; Slovak Academy of Sciences, Instutite of Measurement Science Ruta, Marcello; University of Lincoln School of Life Sciences, Vertebrate Zoology and Analytical Palaeobiology Berman, David; Carnegie Museum of Natural History Pierce, Stephanie; Harvard University Museum of Comparative Zoology Henrici, Amy; Carnegie Museum of Natural History Diadectomorpha, Seymouriamorpha, inner ear, fossa subarcuata, origin Key words: of amniotes, amniote phylogeny Palaeontology Page 1 of 68 Palaeontology 1 1 2 3 INNER EAR MORPHOLOGY OF DIADECTOMORPHS AND SEYMOURIAMORPHS 4 5 6 (TETRAPODA) UNCOVERED BY HIGH-RESOLUTION X-RAY MICROCOMPUTED 7 8 TOMOGRAPHY, AND THE ORIGIN OF THE AMNIOTE CROWN-GROUP 9 10 11 12 by JOZEF KLEMBARA1,*, MIROSLAV HAIN2, MARCELLO RUTA3,*, DAVID S 13 14 4 5 4 15 BERMAN , STEPHANIE E. PIERCE and AMY C. HENRICI 16 17 18 19 1 Comenius University in Bratislava, Faculty of Natural Sciences, Department of Ecology, 20 21 22 Ilkovičova 6, 84215 Bratislava, Slovakia; e-mail: [email protected] 23 24 2 Institute of Measurement Science, Slovak Academy of Sciences, Dúbravská cesta 9, 84104 25 26 Bratislava, Slovakia -
Chapter 9. Paleozoic Vertebrate Ichnology of Grand Canyon National Park
Chapter 9. Paleozoic Vertebrate Ichnology of Grand Canyon National Park By Lorenzo Marchetti1, Heitor Francischini2, Spencer G. Lucas3, Sebastian Voigt1, Adrian P. Hunt4, and Vincent L. Santucci5 1Urweltmuseum GEOSKOP / Burg Lichtenberg (Pfalz) Burgstraße 19 D-66871 Thallichtenberg, Germany 2Universidade Federal do Rio Grande do Sul (UFRGS) Laboratório de Paleontologia de Vertebrados and Programa de Pós-Graduação em Geociências, Instituto de Geociências Porto Alegre, Rio Grande do Sul, Brazil 3New Mexico Museum of Natural History and Science 1801 Mountain Road N.W. Albuquerque, New Mexico, 87104 4Flying Heritage and Combat Armor Museum 3407 109th St SW Everett, Washington 98204 5National Park Service Geologic Resources Division 1849 “C” Street, NW Washington, D.C. 20240 Introduction Vertebrate tracks are the only fossils of terrestrial vertebrates known from Paleozoic strata of Grand Canyon National Park (GRCA), therefore they are of great importance for the reconstruction of the extinct faunas of this area. For more than 100 years, the upper Paleozoic strata of the Grand Canyon yielded a noteworthy vertebrate track collection, in terms of abundance, completeness and quality of preservation. These are key requirements for a classification of tracks through ichnotaxonomy. This chapter proposes a complete ichnotaxonomic revision of the track collections from GRCA and is also based on a large amount of new material. These Paleozoic tracks were produced by different tetrapod groups, such as eureptiles, parareptiles, synapsids and anamniotes, and their size ranges from 0.5 to 20 cm (0.2 to 7.9 in) footprint length. As the result of the irreversibility of the evolutionary process, they provide useful information about faunal composition, faunal events, paleobiogeographic distribution and biostratigraphy. -
1 1 Appendix S1: Complete List of Characters And
1 1 Appendix S1: Complete list of characters and modifications to the data matrix of RC07, with 2 reports of new observations of specimens. 3 The names, the abbreviations and the order of all characters and their states are 4 unchanged from RC07 unless a change is explained. We renumbered the characters we did 5 not delete from 1 to 277, so the character numbers do not match those of RC07. However, 6 merged characters retain the abbreviations of all their components: PREMAX 1-2-3 (our 7 character 1) consists of the characters PREMAX 1, PREMAX 2 and PREMAX 3 of RC07, 8 while MAX 5/PAL 5 (our ch. 22) is assembled from MAX 5 and PAL 5 of RC07. We did not 9 add any characters, except for splitting state 1 of INT FEN 1 into the new state 1 of INT FEN 10 1 (ch. 84) and states 1 and 2 of the new character MED ROS 1 (ch. 85), undoing the merger 11 of PIN FOR 1 and PIN FOR 2 (ch. 91 and 92) and splitting state 0 of TEETH 3 into the new 12 state 0 of TEETH 3 (ch. 183) and the entire new character TEETH 10 (ch. 190). A few 13 characters have additional states or are recoded in other ways. Deleted characters are retained 14 here, together with the reasons why we deleted them and the changes we made to their scores. 15 All multistate characters mention in their names whether they are ordered, unordered, 16 or treated according to a stepmatrix. -
The Postcranial Skeleton of Temnospondyls and the Implications for Cladistics Are Discussed; the Appendicular Skeleton of Eryops Is Considered Hypermorphic
Published as: Pawley, K. and Warren, A. 2006. The appendicular skeleton of Eryops megacephalus 51 (Temnospondyli: Eryopoidea) from the Lower Permian of North America. Journal of Paleontology. 80: 561-580. Copyright © 2006 The Paleontological Society CHAPTER 2. THE APPENDICULAR SKELETON OF ERYOPS MEGACEPHALUS COPE, 1877 (TEMNOSPONDYLI: ERYOPOIDEA) FROM THE LOWER PERMIAN OF NORTH AMERICA Abstract. The appendicular skeleton of the Lower Permian temnospondyl Eryops megacephalus Cope, 1877, described and figured in detail, is similar to that of most temnospondyls, except that it is highly ossified. It displays terrestrial adaptations, including a reduced dermal pectoral girdle and comparatively large limbs, characterized by well- developed processes for muscle attachment. While many features that were previously unknown or uncommon among temnospondyls were identified, no apomorphies of the appendicular skeleton particular to Eryops were found. Some characteristics of the endochondral postcranial skeleton found in well-ossified temnospondyls, such as Eryops, are absent in less well-ossified temnospondyls due to immaturity or paedomorphism. The effects of heterochronic processes on the morphology of the postcranial skeleton of temnospondyls and the implications for cladistics are discussed; the appendicular skeleton of Eryops is considered hypermorphic. Within the Temnospondyli, the Eryops appendicular skeleton is most similar to that of the Dissorophoidea, and most dissimilar to both the most plesiomorphic temnospondyls and the secondarily aquatic -
FOSSIL Project Newsletter Summer 2017
News from the FOSSIL Project Vol. 4, Issue 2, Summer 2017 [email protected] www.myfossil.org @projectfossil The FossilProject Inside this issue: NEWS FROM THE PALEONTOLOGICAL SOCIETY Featured Professional: by Bruce J. MacFadden, President Elect, Paleontological Society Amy C. Henrici Since our last news, there is much to report from the Paleontological Society (PS). In Amateur Spotlight: particular, as you likely know, in 2016 the PS instituted a new avocational member George Martin category. Since that time, more than 60 members have signed up as avocational members; this bodes well for the future. The PS has also added a member of the Featured Organization: amateur/avocational community as an advisor Northwest Paleontological to the PS Council. We are pleased to announce Assocation that Jayson Kowinsky of the Pittsburgh, Pennsylvania area and founder of The Fossil Vertebrate Paleontology of Guy web site has agreed to serve a two-year Orange County, California term. Jayson is otherwise known to members of myFOSSIL in several capacities, including Scorpy, the Giant Sea as the first speaker in our 2016 webinar series, Scorpion! and as a presenter at GSA 2015 in South Carolina and 2016 in Pittsburgh, the latter WIPS’10th Founders where he also led a very successful field trip Symposium collecting Carboniferous plants. We are excited Jayson Kowinsky that Jayson has agreed to serve and we look Montbrook Otter forward to both his input and representation of the amateur fossil community. Online Fossil Projects Seek Volunteers Douglas S. Jones Elected to be a PS Fellow Digital Photography 101 Dr. Douglas S. -
Toward the Origin of Amniotes: Diadectomorph and Synapsid Footprints from the Early Late Carboniferous of Germany
Toward the origin of amniotes: Diadectomorph and synapsid footprints from the early Late Carboniferous of Germany SEBASTIAN VOIGT and MICHAEL GANZELEWSKI Voigt, S. and Ganzelewski, M. 2010. Toward the origin of amniotes: Diadectomorph and synapsid footprints from the early Late Carboniferous of Germany. Acta Palaeontologica Polonica 55 (1): 57–72. Ichnotaxonomic revision of two extended sequences of large tetrapod footprints from the Westphalian A Bochum Forma− tion of western Germany suggests assignment of the specimens to the well−known Permo−Carboniferous ichnogenera Ichniotherium and Dimetropus. Trackway parameters and imprint morphology strongly support basal diadectomorphs and “pelycosaurian”−grade synapsid reptiles, respectively, as the most likely trackmakers. The ichnofossils thereby extend the first appearance of these two important groups of basal tetrapods by about 5–10 million years, to the early Late Carbonifer− ous, which is in accordance with the minimum age for the evolutionary origin of the clades following widely accepted phylogenetic analyses. These trackways provide not only direct evidence bearing on activity and behaviour of large terres− trial tetrapods close to the origin of amniotes, but also serve as a valuable benchmark for the assessment of controversially interpreted vertebrate tracks from other localities of similar age. Key words: Ichniotherium, Dimetropus, Cotylosauria, tetrapod tracks, Westphalian, Germany. Sebastian Voigt [[email protected]−freiberg.de], Geologisches Institut, Technische Universität Bergakademie -
Toward the Origin of Amniotes: Diadectomorph And
Toward the Origin of Amniotes: Diadectomorph and Synapsid Footprints from the Early Late Carboniferous of Germany Author(s): Sebastian Voigt and Michael Ganzelewski Source: Acta Palaeontologica Polonica, 55(1):57-72. 2010. Published By: Institute of Paleobiology, Polish Academy of Sciences DOI: http://dx.doi.org/10.4202/app.2009.0021 URL: http://www.bioone.org/doi/full/10.4202/app.2009.0021 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Toward the origin of amniotes: Diadectomorph and synapsid footprints from the early Late Carboniferous of Germany SEBASTIAN VOIGT and MICHAEL GANZELEWSKI Voigt, S. and Ganzelewski, M. 2010. Toward the origin of amniotes: Diadectomorph and synapsid footprints from the early Late Carboniferous of Germany. Acta Palaeontologica Polonica 55 (1): 57–72. Ichnotaxonomic revision of two extended sequences of large tetrapod footprints from the Westphalian A Bochum Forma− tion of western Germany suggests assignment of the specimens to the well−known Permo−Carboniferous ichnogenera Ichniotherium and Dimetropus. -
Early Vertebrate Evolution New Insights Into the Morphology of the Carboniferous Tetrapod Crassigyrinus Scoticus from Computed Tomography Eva C
Earth and Environmental Science Transactions of the Royal Society of Edinburgh, 109, 157–175, 2019 (for 2018) Early Vertebrate Evolution New insights into the morphology of the Carboniferous tetrapod Crassigyrinus scoticus from computed tomography Eva C. HERBST* and John R. HUTCHINSON Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, University of London, Hatfield, Hertfordshire AL9 7TA, UK. Email: [email protected] *Corresponding author ABSTRACT: The Carboniferous tetrapod Crassigyrinus scoticus is an enigmatic animal in terms of its morphology and its phylogenetic position. Crassigyrinus had extremely reduced forelimbs, and was aquatic, perhaps secondarily. Recent phylogenetic analyses tentatively place Crassigyrinus close to the whatcheeriids. Many Carboniferous tetrapods exhibit several characteristics associated with terrestrial locomotion, and much research has focused on how this novel locomotor mode evolved. However, to estimate the selective pressures and constraints during this important time in vertebrate evolution, it is also important to study early tetrapods like Crassigyrinus that either remained aquatic or secondarily became aquatic. We used computed tomographic scanning to search for more data about the skeletal morphology of Crassigyrinus and discovered several elements previously hidden by the matrix. These elements include more ribs, another neural arch, potential evidence of an ossified pubis and maybe of pleurocentra. We also discovered several additional metatarsals with interesting asymmetrical morphology that may have functional implications. Finally, we reclassify what was previously thought to be a left sacral rib as a left fibula and show previously unknown aspects of the morphology of the radius. These discoveries are examined in functional and phylogenetic contexts. KEY WORDS: evolution, palaeontology, phylogeny, water-to-land transition.