Viruses of Vertebrates and Insects*
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Genomic Characterisation of a Novel Avipoxvirus Isolated from an Endangered Yellow-Eyed Penguin (Megadyptes Antipodes)
viruses Article Genomic Characterisation of a Novel Avipoxvirus Isolated from an Endangered Yellow-Eyed Penguin (Megadyptes antipodes) Subir Sarker 1,* , Ajani Athukorala 1, Timothy R. Bowden 2,† and David B. Boyle 2 1 Department of Physiology, Anatomy and Microbiology, School of Life Sciences, La Trobe University, Melbourne, VIC 3086, Australia; [email protected] 2 CSIRO Livestock Industries, Australian Animal Health Laboratory, Geelong, VIC 3220, Australia; [email protected] (T.R.B.); [email protected] (D.B.B.) * Correspondence: [email protected]; Tel.: +61-3-9479-2317; Fax: +61-3-9479-1222 † Present address: CSIRO Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC 3220, Australia. Abstract: Emerging viral diseases have become a significant concern due to their potential con- sequences for animal and environmental health. Over the past few decades, it has become clear that viruses emerging in wildlife may pose a major threat to vulnerable or endangered species. Diphtheritic stomatitis, likely to be caused by an avipoxvirus, has been recognised as a signifi- cant cause of mortality for the endangered yellow-eyed penguin (Megadyptes antipodes) in New Zealand. However, the avipoxvirus that infects yellow-eyed penguins has remained uncharacterised. Here, we report the complete genome of a novel avipoxvirus, penguinpox virus 2 (PEPV2), which was derived from a virus isolate obtained from a skin lesion of a yellow-eyed penguin. The PEPV2 genome is 349.8 kbp in length and contains 327 predicted genes; five of these genes were found to be unique, while a further two genes were absent compared to shearwaterpox virus 2 (SWPV2). -
<Imagen: Delphi Developers Journal Logo>
DATOS PERSONALES Apellido y Nombres: Diaz, Luis Adrián DNI: 24630504 Domicilio Laboral: Laboratorio de Arbovirus - Instituto de Virología - Facultad de Ciencias Médicas - Universidad Nacional de Córdoba. Córdoba, Argentina. Correo electrónico: [email protected], [email protected] Teléfono laboral: 0351-4334022 Título/s de grado obtenidos: BIÓLOGO. FCEFyN – UNC. Promedio general con y sin aplazos: 8,64. Título/s de Post-Grado obtenidos: DOCTOR en Ciencias Biológicas. FCEFyN. Cargo docente actual: Profesor Adjunto. Dedicación simple. CONCURSADO. Instituto de Virología “Dr. J. M. Vanella”, Facultad Ciencias Médicas, Universidad Nacional de Córdoba. Cargo/s en investigación: Investigador Asistente. Carrera Investigador Científico CONICET. Dedicación Exclusiva. Fecha de ingreso: Septiembre de 2010 Subsidios obtenidos como responsable en los últimos 5 (cinco) años: Virus transmitidos por artrópodos (Arbovirus) de importancia sanitaria en Argentina: estudios ecoepidemiológicos. Código proyecto: 30720130100631CB. Res. SECYT 203/14, Res. Rec UNC: 1565/14. SECYT-UNC. 2014-2016. Evaluación de infección por flavivirus y ricketsias en aves y garrapatas de importancia sanitaria. Cooperación internacional CONICET-FAPESP. Director. 2014-2016. Interacciones ecológicas e inmunológicas entre los virus St. Louis encephalitis y West Nile de importancia médica y veterinaria en Argentina. DIRECTOR. PICT 627/2010. Subsidio otorgado por Ministerio de Ciencia y Tecnología de la Nación, Programa FONCyT. Lugar de trabajo: Instituto de Virología “Dr. J. M. Vanella”. Período: 2012-2014. Interacciones ecológicas e inmunológicas entre los virus St. Louis encephalitis y West Nile de importancia médica y veterinaria en Argentina. DIRECTOR. Fundación Bunge y Born. Lugar de trabajo: Instituto de Virología “Dr. J. M. Vanella”. Período: 2011-2013. Vigilancia epidemiológica de Flavivirus (Arbovirus) y sus posibles vectores y hospedadores asociados en la ciudad de Córdoba. -
Avian Pox in Shearwaters on Lord Howe Island
Association of Avian Veterinarians Australasian Committee Ltd. Annual Conference Proceedings Auckland New Zealand 2017. 25: 63-68. Avian Pox in Shearwaters on Lord Howe Island Subir Sarker1, Shubhagata Das2, Jennifer L. Lavers3, Ian Hutton4, Karla Helbig1, Chris Upton5, Jacob Imbery5, and Shane R. Raidal2 1. Department of Physiology, Anatomy and Microbiology, School of Life Sciences, La Trobe University, Melbourne, VIC, 3086 2. School of Animal and Veterinary Sciences, Charles Sturt University, NSW 2678 3. Institute for Marine and Antarctic Studies, University of Tasmania, TAS 7004 4. Lord Howe Island Museum, Lord Howe Island, NSW 2898 5. Department of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada. Abstract fungal infections are common and contribute to mortality (van Riper and Forrester, 2007). Until recently six avipox- Avipoxvirus infections occur in a wide range of bird spe- virus genomes were published; a pathogenic American cies worldwide. In Australia pox is common in the Aus- strain of Fowlpox virus (Afonso et al., 2000), an attenuat- tralian magpie (Cracticus tibicen), Currawongs (Strepera ed European strain of Fowlpox virus (Laidlaw and Skinner spp.) and Silvereyes (Zosterops lateralis) but very little , 2004), a virulent Canarypox virus (Tulman et al., 2004), a is known about the evolution of this family of viruses pathogenic South African strain of Pigeonpox virus, a Pen- or the disease ecology of avian poxviruses in seabirds. guinpox virus (Offerman et al., 2014) and a pathogenic Pox lesions have been seen in colonies of Shy Albatross Hungarian strain of Turkeypox virus (Banyai et al., 2015). (Thalassarche cauta) in Bass Strait but the epidemiology of pox in pelagic birds is not very well elucidated. -
Pathogenicity of Avipoxviruses in Chickens Isolated from Field Outbreaks Reported in Chhattisgarh
Journal of Animal Research: v.8 n.5, p. 789-795. October 2018 DOI: 10.30954/2277-940X.10.2018.8 Pathogenicity of Avipoxviruses in Chickens Isolated from Field Outbreaks Reported in Chhattisgarh Varsha Rani Gilhare*, S.D. Hirpurkar, C. Sannat and N. Rawat Department of Veterinary Microbiology, College of Veterinary Science and Animal Husbandry, Chhattisgarh Kamdhenu Vishwavidyalay, Anjora, Durg, Chhattisgarh, INDIA *Corresponding author: VR Gilhare; Email: [email protected] Received: 18 June, 2018 Revised: 02 Oct., 2018 Accepted: 08 Oct., 2018 ABSTRACT Virulence of field isolates ofAvipoxviruses was assayed by pathogenicity test performed in 5 weeks old unvaccinated chickens. Viruses as dry scab were collected from naturally pox infected chickens, turkeys and pigeon and propagated in CAM of embryonated chickens upto various passages. In two separate trials 1 and 2, the chickens were infected with 5th and 20th passage CAM suspension, respectively by feather follicle method. All chicken groups in both trials (except control group) developed primary lesions as ‘take’ reaction from 48 to 72 hr PI and there after further progressive development of primary lesion did not differ among field isolates. In trial 1, secondary stage began with recovery from primary lesions at feather follicle, spread of infection to comb and wattles with development of secondary pox lesions and finally recovery from disease was observed after 15 days in FPV and TPV infected chickens, but not in PPV infected chickens. In trial 2, secondary pox lesions were not observed in any of the chickens, indicating that 20 passage virus induced ‘take’ at site without further spread of infection. -
Pan American Health Organization PAHO/ACMR 14/2 Original: English
Pan American Health Organization PAHO/ACMR 14/2 Original: English FOURTEENTH MEETING OF THE ADVISORY COMMITTEE ON MEDICAL RESEARCH Washington, D.C. 7-10 July 1975 ECOLOGY OF ARBOVIRUSES AND THEIR DISEASES IN FRENCH GUIANA The issue of this document does not constitute formal publication. It should not be reviewed, abstracted, or quoted without the consent of the Pan American Health Organization. The authors alone are responsible for statements expressed in signed papers. ECOLOGY OF ARBOVIRUSES AND THEIR DISEASES IN FRENCH GUIANA Approaching the study of the Arbovirus in French Guiana we tried to make manifest the ecological foci, where by the only fact of the presence at the same time of virus reservoirs and of a population of vectors particularly abondant we had some chance of isolating some arbovirus which can cause a disease to man. In order to identify these ecological foci we had to do a certain number of serological investigation trying to use man as a revelator of this arbovirus circu- lation. The serological investigation were executed first by using a series of antigen chosen because they have been isolated before in French Guiana - for the A group, Mucambo and Pixuna virus. - for the B group, Yellow fever virus, St-Louis, Dengue II and Dengue III. After the isolation of two virus : one, seeming new, belonging to the Venezuelan Encephalitis group, the other belonging to group B and recognized as similar to Ilheus, we have also included them in the series of antigens. Military coming from different territories and in particular from Martinica and Guadaloupe seemed to us to be excellent sentinel. -
Chikungunya Virus
CHIKUNGUNYA VIRUS Prepared for the Swine Health Information Center By the Center for Food Security and Public Health, College of Veterinary Medicine, Iowa State University July 2016 SUMMARY Etiology • Chikungunya virus (CHIKV) is an Old World alphavirus within the family Togaviridae that mainly causes disease in humans. • There are three genotypes: West African, East Central South African (ECSA), and Asian. The ECSA genotype has caused human epidemics in Africa and the Indian Ocean Region. The Asian genotype circulates in Asia and has recently emerged in the Americas (Caribbean, Latin America, and the U.S.). Cleaning and Disinfection • The efficacy of most disinfectants against CHIKV is not known. As a lipid-enveloped virus, CHIKV is expected to be destroyed by detergents, acids, alcohols (70% ethanol), aldehydes (formaldehyde, glutaraldehyde), beta-propiolactone, halogens (sodium hypochlorite and iodophors), phenols, quaternary ammonium compounds, and lipid solvents. Exposure to heat (58°C [137°F]), ultraviolent light, or radiation is also sufficient to render togaviruses inactive. Epidemiology • Humans act as hosts during CHIKV epidemics. Animal species including monkeys, rodents, and birds are also capable hosts. • Natural CHIKV infection has not been documented in pigs. There is some evidence that pigs can mount an antibody response to the virus. • In humans CHIKV causes fever, myalgia, and polyarthritis that can persist for years. A maculopapular, pruritic rash, lasting about one week, is seen in about half of human patients. Neonates infected with CHIKV can develop serious disease affecting the heart, skin, and brain. Bleeding and disseminated intravascular coagulation have also been observed in humans. Morbidity is high, but CHIKV rarely causes death. -
Mayaro: an Emerging Viral Threat?
Emerging Microbes & Infections ISSN: (Print) 2222-1751 (Online) Journal homepage: https://www.tandfonline.com/loi/temi20 Mayaro: an emerging viral threat? Yeny Acosta-Ampudia, Diana M. Monsalve, Yhojan Rodríguez, Yovana Pacheco, Juan-Manuel Anaya & Carolina Ramírez-Santana To cite this article: Yeny Acosta-Ampudia, Diana M. Monsalve, Yhojan Rodríguez, Yovana Pacheco, Juan-Manuel Anaya & Carolina Ramírez-Santana (2018) Mayaro: an emerging viral threat?, Emerging Microbes & Infections, 7:1, 1-11, DOI: 10.1038/s41426-018-0163-5 To link to this article: https://doi.org/10.1038/s41426-018-0163-5 © The Author(s) 2018 Published online: 26 Sep 2018. Submit your article to this journal Article views: 1317 View related articles View Crossmark data Citing articles: 31 View citing articles Full Terms & Conditions of access and use can be found at https://www.tandfonline.com/action/journalInformation?journalCode=temi20 Acosta-Ampudia et al. Emerging Microbes & Infections (2018) 7:163 Emerging Microbes & Infections DOI 10.1038/s41426-018-0163-5 www.nature.com/emi REVIEW ARTICLE Open Access Mayaro: an emerging viral threat? Yeny Acosta-Ampudia1, Diana M. Monsalve1, Yhojan Rodríguez1, Yovana Pacheco 1,Juan-ManuelAnaya1 and Carolina Ramírez-Santana1 Abstract Mayaro virus (MAYV), an enveloped RNA virus, belongs to the Togaviridae family and Alphavirus genus. This arthropod- borne virus (Arbovirus) is similar to Chikungunya (CHIKV), Dengue (DENV), and Zika virus (ZIKV). The term “ChikDenMaZika syndrome” has been coined for clinically suspected arboviruses, which have arisen as a consequence of the high viral burden, viral co-infection, and co-circulation in South America. In most cases, MAYV disease is nonspecific, mild, and self-limited. -
Sarker Subir Bmcgenomics 2017.Pdf
UVicSPACE: Research & Learning Repository _____________________________________________________________ Faculty of Science Faculty Publications _____________________________________________________________ Genomic characterization of two novel pathogenic avipoxviruses isolated from pacific shearwaters (Ardenna spp.) Subir Sarker, Shubhagata Das, Jennifer L. Lavers, Ian Hutton, Karla Helbig, Jacob Imbery, Chris Upton, and Shane R. Raidal 13 April 2017 © 2017 Sarker et al. This is an open access article distributed under the terms of the Creative Commons Attribution License. http://creativecommons.org/licenses/by/4.0 This article was originally published at: https://doi.org/10.1186/s12864-017-3680-z Citation for this paper: Sarker, S.; Das, S.; Lavers, J.L.; Hutton, I.; Helbig, K.; … & Raidal, S.R. (2017). Genomic characterization of two novel pathogenic avipoxviruses isolated from pacific shearwaters (Ardenna spp.). BMC Genomics, 18(298). https://doi.org/10.1186/s12864-017-3680-z Sarker et al. BMC Genomics (2017) 18:298 DOI 10.1186/s12864-017-3680-z RESEARCH ARTICLE Open Access Genomic characterization of two novel pathogenic avipoxviruses isolated from pacific shearwaters (Ardenna spp.) Subir Sarker1* , Shubhagata Das2, Jennifer L. Lavers3, Ian Hutton4, Karla Helbig1, Jacob Imbery5, Chris Upton5 and Shane R. Raidal2 Abstract Background: Over the past 20 years, many marine seabird populations have been gradually declining and the factors driving this ongoing deterioration are not always well understood. Avipoxvirus infections have been found in a wide range of bird species worldwide, however, very little is known about the disease ecology of avian poxviruses in seabirds. Here we present two novel avipoxviruses from pacific shearwaters (Ardenna spp), one from a Flesh-footed Shearwater (A. carneipes) (SWPV-1) and the other from a Wedge-tailed Shearwater (A. -
A Mosquito Psorophora Ferox (Humboldt 1819) (Insecta: Diptera: Culicidae)1 Chris Holderman and C
EENY632 A Mosquito Psorophora ferox (Humboldt 1819) (Insecta: Diptera: Culicidae)1 Chris Holderman and C. Roxanne Connelly2 Introduction Janthinosoma sayi Theobald (1907) Psorophora ferox, (Figures 1 and 2) known unofficially Janthinosoma jamaicensis Theobald (1907) as the white-footed woods mosquito (King et al. 1942), is a mosquito species native to most of North and South Aedes pazosi Pazos (1908) America. It is a multivoltine species, having multiple generations each year. The mosquito is typical of woodland Janthinosoma centrale Brethes (1910) environments with pools that intermittently fill with rain or flood water. Several viruses have been isolated from the Compiled by WRBU (2013b) mosquito, but it is generally not thought to play a major role in pathogen transmission to humans. However, the mosquito is known to frequently and voraciously bite people. Synonymy Culex posticatus Wiedemann (1821) Culex musicus Say (1829) Janthinosoma echinata Grabham (1906) Janthinosoma sayi Dyar and Knab (1906) Janthinosoma terminalis Coquillett (1906) Janthinosoma vanhalli Dyar and Knab (1906) Figure 1. Adult female Psorophora ferox (Humboldt), a mosquito (lateral view). Janthinosoma coquillettii Theobald (1907) Credits: Chris Holderman, UF/IFAS 1. This document is EENY632, one of a series of the Department of Entomology and Nematology, UF/IFAS Extension. Original publication date August 2015. Reviewed September 2018. Visit the EDIS website at https://edis.ifas.ufl.edu for the currently supported version of this publication. This document is also available on the Featured Creatures website at http://entomology.ifas.ufl.edu/creatures. 2. Christopher J. Holderman, graduate student; and C. Roxanne Connelly, associate professor, Department of Entomology and Nematology; UF/IFAS Extension, Gainesville, FL 32611. -
Chikungunya Virus
CHIKUNGUNYA VIRUS The mission of the Swine Health Information Center is to protect and enhance the health of the United States swine herd through coordinated global disease monitoring, targeted research investments that minimize the impact of future disease threats, and analysis of swine health data. July 2016 | Updated April 2021 SUMMARY IMPORTANCE . Chikungunya virus (CHIKV) is a mosquito-borne virus that mainly affects humans. Historically, most outbreaks have occurred in Africa and Asia. However, CHIKV now causes sporadic epidemics in other regions including Europe and the Americas. Although natural infection in swine has not been documented, antibodies to CHIKV have been detected in pigs. PUBLIC HEALTH . CHIKV most often causes fever, myalgia, and polyarthralgia in humans. A maculopapular pruritic rash can also be seen, along with ocular signs and involvement of the gastrointestinal system. Most people infected with CHIKV develop symptomatic illness, but death is rare. INFECTION IN SWINE . Natural CHIKV infection has not been documented in swine. There is evidence that pigs can mount an antibody response to CHIKV; however, in many cases, co- infection with other alphaviruses was documented. TREATMENT . There are no alphavirus-specific antiviral drugs. CLEANING AND DISINFECTION . Alphaviruses are not stable in the environment. In general, togaviruses are destroyed by detergents, acids, alcohols (70% ethanol), aldehydes (formaldehyde, glutaraldehyde), beta-propiolactone, halogens (sodium hypochlorite and iodophors), phenols, quaternary ammonium compounds, and lipid solvents. PREVENTION AND CONTROL . Prevention in humans involves vector control and insect repellent use. There are no specific prevention and control measures for CHIKV in swine. TRANSMISSION . Like other arboviruses, CHIKV is maintained in a transmission cycle between mosquitoes and vertebrate hosts. -
First Phylogenetic Analysis of Avipoxvirus (APV) in Brazil1
Pesq. Vet. Bras. 36(5):357-362, maio 2016 DOI: 10.1590/S0100-736X2016000500001 First phylogenetic analysis of Avipoxvirus (APV) in Brazil1 2 2 2 2 3 2 2 4 Hiran C. Kunert-Filho *, Samuel P. Cibulski , Fabrine2 Finkler , Tiela T. Grassotti , Fátima R.F. Jaenisch , Kelly C.T. de Brito , Daiane Carvalho , Maristela Lovato ABSTRACT.- and Benito G. de Brito First phylogenetic analysis of Avipoxvi- rus (APV) in Kunert-FilhoBrazil. Pesquisa H.C., Veterinária Cibulski S.P., Brasileira Finkler 36(5):357-362F., Grassotti T.T., Jaenisch F.R.F., Brito K.C.T., Carvalho D., Lovato M. & Brito B.G. 2016. Laboratório de Saúde E-mail:das Aves e Inovação Tecnológica, Instituto de Pesquisas Veterinárias Desidério Finamor, FEPAGRO Saúde Animal, Estrada do Conde 6000, Eldorado do Sul, RS 92990-000, Brazil. [email protected] This study represents the first phylogenetic analysis of avian poxvirus recovered from- turkeys in Brazil. The clinical disorders related to fowlpox herein described occurred in a turkey housing system. The birds displaying characteristic pox lesions which were ob served on the neck, eyelids and beak of the turkeys. Four affected turkeys were randomly chosen, euthanized and necropsied. Tissues samples were submitted for histopathologicalP4b analysis and total DNA was further extracted, amplified by conventional PCR, sequenced- and phylogenetically analyzed. Avian poxviruses specific PCR was performed basedP4b on core protein gene sequence. The histological analysis revealed dermal inflammatory pro- cess, granulation tissue, hyperplasia of epithelial cells and inclusion bodies. The ® gene was detected in all samples. Sequencing revealed a 100% nucleotide and amino acid se quence identity among the samples, andAvipoxvirus the sequences were deposited in GenBank . -
Bluetongue Virus Replication, Molecular and Structural Biology
Bluetongue virus and disease Vet. Ital., 40 (4), 426-437 Bluetongue virus replication, molecular and structural biology P.P.C. Mertens(1), J. Diprose(2), S. Maan(1), K.P. Singh(1), H. Attoui(3) & A.R. Samuel(1) (1) Orbivirus Group, Institute for Animal Health, Pirbright Laboratory, Pirbright, Woking, Surrey GU24 0NF, United Kingdom (2) Division of Structural Biology, The Henry Wellcome Building, Oxford University, Roosevelt Drive, Oxford OX3 7BN, United Kingdom (3) Unité des Virus Emergents EA3292, Université de la Méditerranée et EFS Alpes-Méditerranée, Fa27 boulevard Jean Moulin, Faculté de Médecine de Marseille, 13005 Marseilles, France Summary The icosahedral bluetongue virus (BTV) particle (~80 nm diameter) is composed of three distinct protein layers. These include the subcore shell (VP3), core-surface layer (VP7) and outer capsid layer (VP2 and VP5). The core also contains ten dsRNA genome segments and three minor proteins (VP1[Pol], VP4[CaP]and VP6[Hel]), which form transcriptase complexes. The atomic structure of the BTV core has been determined by X-ray crystallography, demonstrating how the major core proteins are assembled and interact. The VP3 subcore shell assembles at an early stage of virus morphogenesis and not only determines the internal organisation of the genome and transcriptase complexes, but also forms a scaffold for assembly of the outer protein layers. The BTV polymerase (VP1) and VP3 have many functional constraints and equivalent proteins have been identified throughout the Reoviridae, and even in some other families of dsRNA viruses. Variations in these highly conserved proteins can be used to identify members of different genera (e.g.