The Roles of Metallothioneins in Carcinogenesis Manfei Si and Jinghe Lang*
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Metallothionein-Protein Interactions
DOI 10.1515/bmc-2012-0049 BioMol Concepts 2013; 4(2): 143–160 Review S í lvia Atrian * and Merc è Capdevila Metallothionein-protein interactions Abstract: Metallothioneins (MTs) are a family of univer- Introduction sal, small proteins, sharing a high cysteine content and an optimal capacity for metal ion coordination. They take Metallothioneins (MTs) are a family of small ( < 10 kDa), part in a plethora of metal ion-related events (from detoxi- extremely heterogeneous proteins, sharing a high cysteine fication to homeostasis, storage, and delivery), in a wide content (15 – 30 % ) that confers them an optimal capacity range of stress responses, and in different pathological for metal ion coordination. After their discovery in horse processes (tumorigenesis, neurodegeneration, and inflam- kidneys by Bert Vallee in 1957 (1) , MTs have been identi- mation). The information on both intracellular and extra- fied and characterized in most prokaryotic and all eukary- cellular interactions of MTs with other proteins is here otic organisms. Besides metal ion detoxification, they comprehensively reviewed. In mammalian kidney, MT1/ have been related to a plethora of physiological events, MT2 interact with megalin and related receptors, and with from the homeostasis, storage, and delivery of physiologi- the transporter transthyretin. Most of the mammalian MT cal metals, to the defense against a wide range of stresses partners identified concern interactions with central nerv- and pathological processes (tumor genesis, neurodegen- ous system (mainly brain) proteins, both through physical eration, inflammation, etc.). It is now a common agree- contact or metal exchange reactions. Physical interactions ment among MT researchers that the ambiguity when mainly involve neuronal secretion multimers. -
Metallothionein Monoclonal Antibody, Clone N11-G
Metallothionein monoclonal antibody, clone N11-G Catalog # : MAB9787 規格 : [ 50 uL ] List All Specification Application Image Product Rabbit monoclonal antibody raised against synthetic peptide of MT1A, Western Blot (Recombinant protein) Description: MT1B, MT1E, MT1F, MT1G, MT1H, MT1IP, MT1L, MT1M, MT2A. Immunogen: A synthetic peptide corresponding to N-terminus of human MT1A, MT1B, MT1E, MT1F, MT1G, MT1H, MT1IP, MT1L, MT1M, MT2A. Host: Rabbit enlarge Reactivity: Human, Mouse Immunoprecipitation Form: Liquid Enzyme-linked Immunoabsorbent Assay Recommend Western Blot (1:1000) Usage: ELISA (1:5000-1:10000) The optimal working dilution should be determined by the end user. Storage Buffer: In 20 mM Tris-HCl, pH 8.0 (10 mg/mL BSA, 0.05% sodium azide) Storage Store at -20°C. Instruction: Note: This product contains sodium azide: a POISONOUS AND HAZARDOUS SUBSTANCE which should be handled by trained staff only. Datasheet: Download Applications Western Blot (Recombinant protein) Western blot analysis of recombinant Metallothionein protein with Metallothionein monoclonal antibody, clone N11-G (Cat # MAB9787). Lane 1: 1 ug. Lane 2: 3 ug. Lane 3: 5 ug. Immunoprecipitation Enzyme-linked Immunoabsorbent Assay ASSP5 MT1A MT1B MT1E MT1F MT1G MT1H MT1M MT1L MT1IP Page 1 of 5 2021/6/2 Gene Information Entrez GeneID: 4489 Protein P04731 (Gene ID : 4489);P07438 (Gene ID : 4490);P04732 (Gene ID : Accession#: 4493);P04733 (Gene ID : 4494);P13640 (Gene ID : 4495);P80294 (Gene ID : 4496);P80295 (Gene ID : 4496);Q8N339 (Gene ID : 4499);Q86YX0 (Gene ID : 4490);Q86YX5 -
Identification of the Binding Partners for Hspb2 and Cryab Reveals
Brigham Young University BYU ScholarsArchive Theses and Dissertations 2013-12-12 Identification of the Binding arP tners for HspB2 and CryAB Reveals Myofibril and Mitochondrial Protein Interactions and Non- Redundant Roles for Small Heat Shock Proteins Kelsey Murphey Langston Brigham Young University - Provo Follow this and additional works at: https://scholarsarchive.byu.edu/etd Part of the Microbiology Commons BYU ScholarsArchive Citation Langston, Kelsey Murphey, "Identification of the Binding Partners for HspB2 and CryAB Reveals Myofibril and Mitochondrial Protein Interactions and Non-Redundant Roles for Small Heat Shock Proteins" (2013). Theses and Dissertations. 3822. https://scholarsarchive.byu.edu/etd/3822 This Thesis is brought to you for free and open access by BYU ScholarsArchive. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of BYU ScholarsArchive. For more information, please contact [email protected], [email protected]. Identification of the Binding Partners for HspB2 and CryAB Reveals Myofibril and Mitochondrial Protein Interactions and Non-Redundant Roles for Small Heat Shock Proteins Kelsey Langston A thesis submitted to the faculty of Brigham Young University in partial fulfillment of the requirements for the degree of Master of Science Julianne H. Grose, Chair William R. McCleary Brian Poole Department of Microbiology and Molecular Biology Brigham Young University December 2013 Copyright © 2013 Kelsey Langston All Rights Reserved ABSTRACT Identification of the Binding Partners for HspB2 and CryAB Reveals Myofibril and Mitochondrial Protein Interactors and Non-Redundant Roles for Small Heat Shock Proteins Kelsey Langston Department of Microbiology and Molecular Biology, BYU Master of Science Small Heat Shock Proteins (sHSP) are molecular chaperones that play protective roles in cell survival and have been shown to possess chaperone activity. -
CD56+ T-Cells in Relation to Cytomegalovirus in Healthy Subjects and Kidney Transplant Patients
CD56+ T-cells in Relation to Cytomegalovirus in Healthy Subjects and Kidney Transplant Patients Institute of Infection and Global Health Department of Clinical Infection, Microbiology and Immunology Thesis submitted in accordance with the requirements of the University of Liverpool for the degree of Doctor in Philosophy by Mazen Mohammed Almehmadi December 2014 - 1 - Abstract Human T cells expressing CD56 are capable of tumour cell lysis following activation with interleukin-2 but their role in viral immunity has been less well studied. The work described in this thesis aimed to investigate CD56+ T-cells in relation to cytomegalovirus infection in healthy subjects and kidney transplant patients (KTPs). Proportions of CD56+ T cells were found to be highly significantly increased in healthy cytomegalovirus-seropositive (CMV+) compared to cytomegalovirus-seronegative (CMV-) subjects (8.38% ± 0.33 versus 3.29%± 0.33; P < 0.0001). In donor CMV-/recipient CMV- (D-/R-)- KTPs levels of CD56+ T cells were 1.9% ±0.35 versus 5.42% ±1.01 in D+/R- patients and 5.11% ±0.69 in R+ patients (P 0.0247 and < 0.0001 respectively). CD56+ T cells in both healthy CMV+ subjects and KTPs expressed markers of effector memory- RA T-cells (TEMRA) while in healthy CMV- subjects and D-/R- KTPs the phenotype was predominantly that of naïve T-cells. Other surface markers, CD8, CD4, CD58, CD57, CD94 and NKG2C were expressed by a significantly higher proportion of CD56+ T-cells in healthy CMV+ than CMV- subjects. Functional studies showed levels of pro-inflammatory cytokines IFN-γ and TNF-α, as well as granzyme B and CD107a were significantly higher in CD56+ T-cells from CMV+ than CMV- subjects following stimulation with CMV antigens. -
Investigation of Structural Properties of Methylated Human Promoter Regions in Terms of Dna Helical Rise
INVESTIGATION OF STRUCTURAL PROPERTIES OF METHYLATED HUMAN PROMOTER REGIONS IN TERMS OF DNA HELICAL RISE A THESIS SUBMITTED TO THE GRADUATE SCHOOL OF INFORMATICS OF MIDDLE EAST TECHNICAL UNIVERSITY BY BURCU YALDIZ IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE IN BIOINFORMATICS AUGUST 2014 INVESTIGATION OF STRUCTURAL PROPERTIES OF METHYLATED HUMAN PROMOTER REGIONS IN TERMS OF DNA HELICAL RISE submitted by Burcu YALDIZ in partial fulfillment of the requirements for the degree of Master of Science, Bioinformatics Program, Middle East Technical University by, Prof. Dr. Nazife Baykal _____________________ Director, Informatics Institute Assist. Prof. Dr. Yeşim Aydın Son _____________________ Head of Department, Health Informatics, METU Assist. Prof. Dr. Yeşim Aydın Son Supervisor, Health Informatics, METU _____________________ Examining Committee Members: Assoc. Prof. Dr. Tolga Can _____________________ METU, CENG Assist. Prof. Dr. Yeşim Aydın Son _____________________ METU, Health Informatics Assist. Prof. Dr. Aybar Can Acar _____________________ METU, Health Informatics Assist. Prof. Dr. Özlen Konu _____________________ Bilkent University, Molecular Biology and Genetics Assoc. Prof. Dr. Çağdaş D. Son _____________________ METU, Biology Date: 27.08.2014 I hereby declare that all information in this document has been obtained and presented in accordance with academic rules and ethical conduct. I also declare that, as required by these rules and conduct, I have fully cited and referenced all material and results that are not original to this work. Name, Last name : Burcu Yaldız Signature : iii ABSTRACT INVESTIGATION OF STRUCTURAL PROPERTIES OF METHYLATED HUMAN PROMOTER REGIONS IN TERMS OF DNA HELICAL RISE Yaldız, Burcu M.Sc. Bioinformatics Program Advisor: Assist. Prof. Dr. Yeşim Aydın Son August 2014, 60 pages The infamous double helix structure of DNA was assumed to be a rigid, uniformly observed structure throughout the genomic DNA. -
Supplementary Table 3 Complete List of RNA-Sequencing Analysis of Gene Expression Changed by ≥ Tenfold Between Xenograft and Cells Cultured in 10%O2
Supplementary Table 3 Complete list of RNA-Sequencing analysis of gene expression changed by ≥ tenfold between xenograft and cells cultured in 10%O2 Expr Log2 Ratio Symbol Entrez Gene Name (culture/xenograft) -7.182 PGM5 phosphoglucomutase 5 -6.883 GPBAR1 G protein-coupled bile acid receptor 1 -6.683 CPVL carboxypeptidase, vitellogenic like -6.398 MTMR9LP myotubularin related protein 9-like, pseudogene -6.131 SCN7A sodium voltage-gated channel alpha subunit 7 -6.115 POPDC2 popeye domain containing 2 -6.014 LGI1 leucine rich glioma inactivated 1 -5.86 SCN1A sodium voltage-gated channel alpha subunit 1 -5.713 C6 complement C6 -5.365 ANGPTL1 angiopoietin like 1 -5.327 TNN tenascin N -5.228 DHRS2 dehydrogenase/reductase 2 leucine rich repeat and fibronectin type III domain -5.115 LRFN2 containing 2 -5.076 FOXO6 forkhead box O6 -5.035 ETNPPL ethanolamine-phosphate phospho-lyase -4.993 MYO15A myosin XVA -4.972 IGF1 insulin like growth factor 1 -4.956 DLG2 discs large MAGUK scaffold protein 2 -4.86 SCML4 sex comb on midleg like 4 (Drosophila) Src homology 2 domain containing transforming -4.816 SHD protein D -4.764 PLP1 proteolipid protein 1 -4.764 TSPAN32 tetraspanin 32 -4.713 N4BP3 NEDD4 binding protein 3 -4.705 MYOC myocilin -4.646 CLEC3B C-type lectin domain family 3 member B -4.646 C7 complement C7 -4.62 TGM2 transglutaminase 2 -4.562 COL9A1 collagen type IX alpha 1 chain -4.55 SOSTDC1 sclerostin domain containing 1 -4.55 OGN osteoglycin -4.505 DAPL1 death associated protein like 1 -4.491 C10orf105 chromosome 10 open reading frame 105 -4.491 -
Identification of 10 Hub Genes Related to the Progression of Colorectal
Identification of 10 Hub genes related to the progression of colorectal cancer by co-expression analysis Jie Meng1,2, Rui Su2, Yun Liao2, Yanyan Li2 and Ling Li2 1 Department of Pharmacy, Anhui University of Chinese Medicine, Hefei, China 2 Department of Pharmacy, Tongren Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China ABSTRACT Background: Colorectal cancer (CRC) is the third most common cancer in the world. The present study is aimed at identifying hub genes associated with the progression of CRC. Method: The data of the patients with CRC were obtained from the Gene Expression Omnibus (GEO) database and assessed by weighted gene co-expression network analysis (WGCNA), Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses performed in R by WGCNA, several hub genes that regulate the mechanism of tumorigenesis in CRC were identified. Differentially expressed genes in the data sets GSE28000 and GSE42284 were used to construct a co-expression network for WGCNA. The yellow, black and blue modules associated with CRC level were filtered. Combining the co-expression network and the PPI network, 15 candidate hub genes were screened. Results: After validation using the TCGA-COAD dataset, a total of 10 hub genes (MT1X, MT1G, MT2A, CXCL8, IL1B, CXCL5, CXCL11, IL10RA, GZMB, KIT) closely related to the progression of CRC were identified. The expressions of MT1G, CXCL8, IL1B, CXCL5, CXCL11 and GZMB in CRC tissues were higher than normal tissues (p-value < 0.05). The expressions of MT1X, MT2A, IL10RA and KIT in CRC tissues were lower than normal tissues (p-value < 0.05). -
Supplement 1 Microarray Studies
EASE Categories Significantly Enriched in vs MG vs vs MGC4-2 Pt1-C vs C4-2 Pt1-C UP-Regulated Genes MG System Gene Category EASE Global MGRWV Pt1-N RWV Pt1-N Score FDR GO Molecular Extracellular matrix cellular construction 0.0008 0 110 genes up- Function Interpro EGF-like domain 0.0009 0 regulated GO Molecular Oxidoreductase activity\ acting on single dono 0.0015 0 Function GO Molecular Calcium ion binding 0.0018 0 Function Interpro Laminin-G domain 0.0025 0 GO Biological Process Cell Adhesion 0.0045 0 Interpro Collagen Triple helix repeat 0.0047 0 KEGG pathway Complement and coagulation cascades 0.0053 0 KEGG pathway Immune System – Homo sapiens 0.0053 0 Interpro Fibrillar collagen C-terminal domain 0.0062 0 Interpro Calcium-binding EGF-like domain 0.0077 0 GO Molecular Cell adhesion molecule activity 0.0105 0 Function EASE Categories Significantly Enriched in Down-Regulated Genes System Gene Category EASE Global Score FDR GO Biological Process Copper ion homeostasis 2.5E-09 0 Interpro Metallothionein 6.1E-08 0 Interpro Vertebrate metallothionein, Family 1 6.1E-08 0 GO Biological Process Transition metal ion homeostasis 8.5E-08 0 GO Biological Process Heavy metal sensitivity/resistance 1.9E-07 0 GO Biological Process Di-, tri-valent inorganic cation homeostasis 6.3E-07 0 GO Biological Process Metal ion homeostasis 6.3E-07 0 GO Biological Process Cation homeostasis 2.1E-06 0 GO Biological Process Cell ion homeostasis 2.1E-06 0 GO Biological Process Ion homeostasis 2.1E-06 0 GO Molecular Helicase activity 2.3E-06 0 Function GO Biological -
Emerging Roles of Metallothioneins in Beta Cell Pathophysiology: Beyond and Above Metal Homeostasis and Antioxidant Response
biology Review Emerging Roles of Metallothioneins in Beta Cell Pathophysiology: Beyond and above Metal Homeostasis and Antioxidant Response Mohammed Bensellam 1,* , D. Ross Laybutt 2,3 and Jean-Christophe Jonas 1 1 Pôle D’endocrinologie, Diabète et Nutrition, Institut de Recherche Expérimentale et Clinique, Université Catholique de Louvain, B-1200 Brussels, Belgium; [email protected] 2 Garvan Institute of Medical Research, Sydney, NSW 2010, Australia; [email protected] 3 St Vincent’s Clinical School, UNSW Sydney, Sydney, NSW 2010, Australia * Correspondence: [email protected]; Tel.: +32-2764-9586 Simple Summary: Defective insulin secretion by pancreatic beta cells is key for the development of type 2 diabetes but the precise mechanisms involved are poorly understood. Metallothioneins are metal binding proteins whose precise biological roles have not been fully characterized. Available evidence indicated that Metallothioneins are protective cellular effectors involved in heavy metal detoxification, metal ion homeostasis and antioxidant defense. This concept has however been challenged by emerging evidence in different medical research fields revealing novel negative roles of Metallothioneins, including in the context of diabetes. In this review, we gather and analyze the available knowledge regarding the complex roles of Metallothioneins in pancreatic beta cell biology and insulin secretion. We comprehensively analyze the evidence showing positive effects Citation: Bensellam, M.; Laybutt, of Metallothioneins on beta cell function and survival as well as the emerging evidence revealing D.R.; Jonas, J.-C. Emerging Roles of negative effects and discuss the possible underlying mechanisms. We expose in parallel findings Metallothioneins in Beta Cell from other medical research fields and underscore unsettled questions. -
WO 2014/135655 Al 12 September 2014 (12.09.2014) P O P C T
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2014/135655 Al 12 September 2014 (12.09.2014) P O P C T (51) International Patent Classification: (81) Designated States (unless otherwise indicated, for every C12Q 1/68 (2006.01) kind of national protection available): AE, AG, AL, AM, AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, (21) International Application Number: BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, PCT/EP2014/054384 DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, (22) International Filing Date: HN, HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KN, KP, KR, 6 March 2014 (06.03.2014) KZ, LA, LC, LK, LR, LS, LT, LU, LY, MA, MD, ME, MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, (25) Filing Language: English OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, (26) Publication Language: English SC, SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, (30) Priority Data: ZW. 13305253.0 6 March 2013 (06.03.2013) EP (84) Designated States (unless otherwise indicated, for every (71) Applicants: INSTITUT CURIE [FR/FR]; 26 rue d'Ulm, kind of regional protection available): ARIPO (BW, GH, F-75248 Paris cedex 05 (FR). CENTRE NATIONAL DE GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, SZ, TZ, LA RECHERCHE SCIENTIFIQUE [FR/FR]; 3 rue UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, TJ, Michel Ange, F-75016 Paris (FR). -
Up-Regulation of Metallothionein Isoforms in Keloid Keratinocytes
Lim 31_8 30/12/05 15:12 Page 385 INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE 17: 385-389, 2006 385 Up-regulation of metallothionein isoforms in keloid keratinocytes D. LIM1, T.T. PHAN2, G.W. YIP1 and B.H. BAY1 1Department of Anatomy, National University of Singapore, 4 Medical Drive, Singapore 117597; 2Department of Surgery and Division of Bioengineering, National University of Singapore, 5 Lower Kent Ridge Road, Singapore 119074 Received August 31, 2005; Accepted October 17, 2005 Abstract. Keloids are proliferative growths of dermal by Kagi and Vallee (4) and Kagi et al (5). MTs have selective collagen, usually resulting from excessive tissue response binding to metals such as zinc, copper and cadmium (6) and during wound healing. There is evidence that keratinocytes are involved in the detoxification of heavy metals such as may promote keloidogenesis via epithelial-mesenchymal cadmium and mercury. MTs are known to be associated with interactions. Metallothioneins (MTs) are known to be involved protection against DNA damage and oxidative stress (7). in the fundamental cellular processes of growth and apoptosis. MTs have been implicated in the fundamental processes of In this study, we evaluated the expression of MT isoforms in cell proliferation, differentiation and apoptosis (8). There are normal and keloid keratinocytes. The expression patterns of >10 functional MT isoforms in humans, which encode four ten functional MT isoforms were assessed using real-time main groups of MT proteins viz. MT-1, MT-2, MT-3 and RT-PCR in primary cultures of normal and keloid keratino- MT-4 proteins (9-11). The MT-1 protein comprises many cytes. -
UC Riverside UCR Honors Capstones 2019-2020
UC Riverside UCR Honors Capstones 2019-2020 Title Development of a Method for Heterologous Expression of Moss Methyltransferases in Pichia Pastoris Yeast Permalink https://escholarship.org/uc/item/4f71h39k Author Fogel, Dustin Publication Date 2021-01-08 Data Availability The data associated with this publication are within the manuscript. eScholarship.org Powered by the California Digital Library University of California By A capstone project submitted for Graduation with University Honors University Honors University of California, Riverside APPROVED _______________________________________________ Dr. Department of _______________________________________________ Dr. Richard Cardullo, Howard H Hays Jr. Chair, University Honors Abstract Acknowledgements: I would like to thanks to Anjin Huang for her extensive work on designing and leading a significant part of the transformation of new Pichia cultures. I would also like to thank Dr. Eugene A. Nothnagel, my faculty mentor, for his unending dedication, guidance, and support throughout both this capstone project and my time as an undergraduate student at UCR. Additionally, I would like to thank Dr. Martha L. Orozco-Cárdenas for aiding in this project by donating both lab space and time to developing this project. Finally, I would like to thank other student collaborators, Carlos Aguilar, James Yen, Maivy Ngoc Le, and others in assisting with conducting many of the experiments that culminated in this capstone project. 1 Table of Contents Abstract_____________________________________________________________________