Phylogeny and Taxonomy of the Genus <I>Gliocephalotrichum</I>
Total Page:16
File Type:pdf, Size:1020Kb
Persoonia 32, 2014: 127–140 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158514X680261 Phylogeny and taxonomy of the genus Gliocephalotrichum L. Lombard1, L.M. Serrato-Diaz 2, R. Cheewangkoon 3, R.D. French-Monar 2, C. Decock 4, P.W. Crous 1,5,6 Key words Abstract Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic Gliocephalotrichum studies of these fungi have relied on morphology and DNA sequence comparisons of the internal transcribed spacer Leuconectria region of the nuclear rDNA (ITS) and the β-tubulin gene regions. Employing DNA sequence data from four loci phylogeny (β-tubulin, histone H3, ITS, and translation elongation factor 1-alpha) and morphological comparisons, the taxonomic taxonomy status of the genus Gliocephalotrichum was re-evaluated. As a result five species are newly described, namely G. humicola (Taiwan, soil), G. mexicanum (rambutan fruit from Mexico), G. nephelii (rambutan fruit from Guatemala), G. queenslandicum (Australia, endophytic isolations) and G. simmonsii (rambutan fruit from Guatemala). Although species of Gliocephalotrichum are generally not regarded as important plant pathogens, their ability to cause post- harvest fruit rot could have an impact on fruit export and storage. Article info Received: 2 August 2013; Accepted: 1 November 2013; Published: 20 March 2014. INTRODUCTION duced by Zhuang et al. (2007), although mistakenly connected to the asexual species, G. cylindrosporum. This was later cor- The asexual genus Gliocephalotrichum, with G. bulbilium as rected by Zhuang & Luo (2008), although they refrained from type, was introduced by Ellis & Hesseltine (1962) to accom- providing a name for the asexual morph based on the version modate a species isolated from soil. The genus was defined of the International Code of Botanical Nomenclature applied at as having conidiophores consisting of a penicillate conidiog- that time (McNeill et al. 2006). Following the abolishment of Art. enous apparatus terminating in phialides producing ellipsoidal, 59 (Hawksworth et al. 2011), and based on the current Interna- aseptate conidia, and subtended by sterile stipe extensions. tional Code of Nomenclature for algae, fungi and plants (ICN; Morphologically, this genus closely resembles the asexual McNeill et al. 2012), Rossman et al. (2013) proposed that the morph of Calonectria (= Cylindrocladium) but is distinguished genus name Gliocephalotrichum be retained over Leuconectria, by the point of origin of the sterile stipe extension (Rossman and therefore provided the name G. grande to accommodate et al. 1993, 1999, Schoch et al. 2000). In Gliocephalotrichum, L. grandis in Gliocephalotrichum. the stipe extension develops directly below (Ellis & Hesseltine Although limited information is available on the etiology of these 1962) or some distance below (Wiley & Simmons 1971) the fungi, they are generally regarded as saprobes, as they are penicillus, whereas the stipe extension originates from within readily isolated from soils and decaying plant material, such the conidiogenous apparatus of Calonectria (Rossman et al. as leaf litter and rotting fruits (Ellis & Hesseltine 1962, Wiley & 1993, Lombard et al. 2010b). Simmons 1971, Huang & Schmitt 1973, Rossman et al. 1993, Seven species that are recognised within the genus include G. ba- Watanabe & Nakamura 2005, Decock et al. 2006, Zhuang et cillisporum (Decock et al. 2006), G. bulbilium (Ellis & Hesseltine al. 2007). With the exception of G. ohiense (Huang & Schmitt 1962), G. cylindrosporum, G. microchlamydosporum (Wiley 1973), all species are regarded as tropical or subtropical fungi & Simmons 1971), G. longibrachium (Decock et al. 2006), (Rossman et al. 1993, 1999, Decock et al. 2006). Recently, G. ohiense (Huang & Schmitt 1973) and G. simplex (Wiley several new reports have appeared of fruit rots associated with & Simmons 1971). The genus Leuconectria, with L. clusiae species of Gliocephalotrichum, namely of rambutan (Nephelium as type, was introduced by Rossman et al. (1993) as the sexual lappaceum) in Hawaii (Nishijima et al. 2002), Malaysia (Intan morph of G. bulbilium. It is characterised by having superficial, Sakinah & Latiffah 2013), The Philippines (Pordesimo & Luna- uniloculate perithecia becoming purple in KOH+ and producing Ilag 1982), Puerto Rico (Serrato-Diaz et al. 2012), Sri Lanka aseptate ascospores. A second species, L. grandis, was intro- (Sivakumar et al. 1997, 1999, 2000) and Thailand (Farungsang et al. 1992, Sangchote et al. 1998), guava (Psidium guajava) in Hawaii (Constantelos et al. 2011), durian (Durio graveolens 1 CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; corresponding author e-mail: [email protected]. and D. kutejensis) in Brunei Darussalam (Sivapalan et al. 1998), 2 Department of Plant Pathology and Microbiology, Texas A&M AgriLife Terminalia chebula in India (Singh et al. 2012), mangosteen Extension Service, 6500 Amarillo Blvd W. Amarillo, Texas 79106, USA. (Garcinia mangostana) in Thailand (Sangchote & Pongpisutta 3 Department of Entomology and Plant Pathology, Faculty of Agriculture, 1998) and cranberry (Vaccinium macrocarpon) in the USA Chiang Mai University, Chiang Mai 50200, Thailand. 4 Mycothèque de l’Université catholique de Louvain (BCCM/MUCL), Earth (Constantelos et al. 2011). and Life Institute, Université catholique de Louvain, Place Croix du Sud 2 A recent survey of rambutan fruit originating from Guatemala, bte L07.05.06, 1348 Louvain-la-Neuve, Belgium. Mexico and Puerto Rico resulted in the accumulation of several 5 Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 isolates of Gliocephalotrichum. Furthermore, baiting from soils CH Utrecht, The Netherlands. 6 Laboratory of Phytopathology, Wageningen University and Research Centre collected in Thailand revealed several additional isolates of (WUR), Doevendaalsesteeg 1, 6708 PD Wageningen, The Netherlands. Gliocephalotrichum. A number of isolates have also accumu- © 2014 Naturalis Biodiversity Center & Centraalbureau voor Schimmelcultures You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. 128 Persoonia – Volume 32, 2014 Nong Robert Robert Robert Robert Robert Robert Y. & V. V. V. V. V. V. Paulus Paulus & & & & & & B. B. & & Buck Zhuang Crous Crous Crous Crous Crous Crous Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Serrato-Diaz Huang Swart Meyer Wickerham Reblova Decock Decock Decock Decock Klinsukont Decock Decock Chomchalow Chomchalow Pfenning Pfenning Sutton Nicot Gandjar Steer Steer C. C. L.J. L. Collector W.Y. L. M. T. C. C. L.M. L.M. L.M. L.M. L.M. L.M. L.M. L.M. L.M. L.M. C. S. S. I. W.R. – L.M. L.M. L.H. P.W. P.W. P.W. P.W. P.W. P.W. C. C. L.M. L.M. J.A. – I. I. L.M. L.M. L.M. H.J. Republic J. African Guiana Guiana Guiana Guiana Guiana Guiana Rico Rico Rico Rico Rico Rico Africa Africa French French USA Central Brazil Country China Brazil Thailand USA French French Puerto Puerto Puerto Puerto Puerto Mexico Mexico Mexico Mexico Mexico Thailand Thailand Thailand Indonesia Puerto South Guatamala Guatamala USA Taiwan Taiwan Taiwan Taiwan Taiwan Taiwan French French Mexico Mexico Zaïre Zaïre Australia Australia Guatamala Guatamala Guatamala South sp. sp. root litter litter litter litter litter litter litter Substrate Nyssa sylvatica Nephelium lappaceum N. lappaceum N. lappaceum N. lappaceum N. lappaceum N. lappaceum N. lappaceum N. lappaceum N. lappaceum N. lappaceum Flacourtia Clusia N. lappaceum N. lappaceum N. lappaceum N. lappaceum Eleaeocarpus angustifolius E. angustifolius N. lappaceum N. lappaceum N. lappaceum TEF 2 366702 KF513464 soil ITS EF121859 HM054075 leaf DQ366707 KF513458 soil DQ366701 KF513455 – DQ366700 KF513454 – GenBank accession HIS3 DQ374414 KF513325 KF513183 DQ374409 KF513327 KF513407 KF513252 leaf KF513409 air DQ374413 KF513324 DQ374408 KF513406 leaf KF513182 KF513323 KF513251 KF513405 plant BTUB KF513187 KF513188 DQ377830 KF513331 DQ377829 KF513332 KF513189 KF513333 KF513190 KF513256 KF513334 KF513191 KF513257 KF513335 KF513192 DQ374406 KF513336 KF513193 DQ374407 KF513413 KF513337 KF513194 KF513414 KF513258 KF513338 KF513195 KF513415 KF513259 KF513339 KF513196 soil KF513416 KF513260 KF513340 KF513197 KF513417 KF513261 leaf KF513341 KF513198 KF513418 KF513262 leaf KF513342 KF513419 KF513263 KF513343 KF513420 KF513264 KF513344 KF513421 KF513265 KF513422 KF513266 EU984072 KF513423 KF513267 KF513424 KF513425 – KF513426 KF513208 KF513354 KF513277 KF513436 soil KF513184 KF513328 KF513186 KF513253 KF513330 KF513410 KF513255 KF513412