D2.2 Conceptual Model of Ecological Impacts of Barriers in EU
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Rudd (Scardinius Erythrophthalmus) Introduced to the Iberian Peninsula: Feeding Ecology in Lake Banyoles
Hydrobiologia 436: 159–164, 2000. 159 © 2000 Kluwer Academic Publishers. Printed in the Netherlands. Rudd (Scardinius erythrophthalmus) introduced to the Iberian peninsula: feeding ecology in Lake Banyoles Emili Garc´ıa-Berthou & Ramon Moreno-Amich Departament de Ci`encies Ambientals & Institut d’Ecologia Aqu`atica, Universitat de Girona, E-17071 Girona, Catalonia, Spain Phone: +34 972 418 467. Fax: +34 972 418 150. E-mail: [email protected] Received in revised form 10 March 2000; accepted 20 June 2000 Key words: cyprinid fish, rudd, Scardinius erythrophthalmus, food, diet Abstract The first data on the ecology of rudd (Scardinius erythrophthalmus) introduced to the Iberian peninsula are presen- ted. The habitat and diet variation of rudd were studied in Lake Banyoles (Spain), an oligotrophic karstic lake dominated by exotic fish species. Rudd were strictly littoral and the diet was based on detritus and plant material. The most important animal prey were the cladocerans Daphnia longispina and Scapholeberis rammneri, amphi- pods and several late stages of nematoceran dipterans. Rudd were more zooplanktivorous in spring and autumn and less in summer. There was also a size-dependent diet shift, from microcrustaceans to macroinvertebrates. The diet of rudd was also distinguished by the importance of plant material and various small neustonic invertebrates, particularly S. rammneri and late stages of nematocerans, showing a strong resource partitioning with other fish species. The degree of herbivory in Lake Banyoles was lower than usual. Introduction or early 20th and since the 1980s are expanding their distribution (Burkhead & Williams, 1991), though Rudd (Scardinius erythrophthalmus) are medium- their interactions with native species remain unknown sized cyprinid fish native to freshwaters of Europe and (Easton et al., 1993). -
Guidance Document on the Strict Protection of Animal Species of Community Interest Under the Habitats Directive 92/43/EEC
Guidance document on the strict protection of animal species of Community interest under the Habitats Directive 92/43/EEC Final version, February 2007 1 TABLE OF CONTENTS FOREWORD 4 I. CONTEXT 6 I.1 Species conservation within a wider legal and political context 6 I.1.1 Political context 6 I.1.2 Legal context 7 I.2 Species conservation within the overall scheme of Directive 92/43/EEC 8 I.2.1 Primary aim of the Directive: the role of Article 2 8 I.2.2 Favourable conservation status 9 I.2.3 Species conservation instruments 11 I.2.3.a) The Annexes 13 I.2.3.b) The protection of animal species listed under both Annexes II and IV in Natura 2000 sites 15 I.2.4 Basic principles of species conservation 17 I.2.4.a) Good knowledge and surveillance of conservation status 17 I.2.4.b) Appropriate and effective character of measures taken 19 II. ARTICLE 12 23 II.1 General legal considerations 23 II.2 Requisite measures for a system of strict protection 26 II.2.1 Measures to establish and effectively implement a system of strict protection 26 II.2.2 Measures to ensure favourable conservation status 27 II.2.3 Measures regarding the situations described in Article 12 28 II.2.4 Provisions of Article 12(1)(a)-(d) in relation to ongoing activities 30 II.3 The specific protection provisions under Article 12 35 II.3.1 Deliberate capture or killing of specimens of Annex IV(a) species 35 II.3.2 Deliberate disturbance of Annex IV(a) species, particularly during periods of breeding, rearing, hibernation and migration 37 II.3.2.a) Disturbance 37 II.3.2.b) Periods -
Publis14-Mistea-007 {5E1DA239
Bayesian hierarchical model used to analyze regression between fish body size and scale size: application torare fish species Zingel asper Bénédicte Fontez Nguyen The, Laurent Cavalli To cite this version: Bénédicte Fontez Nguyen The, Laurent Cavalli. Bayesian hierarchical model used to analyze regression between fish body size and scale size: application to rare fish species Zingel asper. Knowledge and Management of Aquatic Ecosystems, EDP sciences/ONEMA, 2014, pp.10P1-10P8. 10.1051/kmae/2014008. hal-01499072 HAL Id: hal-01499072 https://hal.archives-ouvertes.fr/hal-01499072 Submitted on 30 Mar 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Knowledge and Management of Aquatic Ecosystems (2014) 413, 10 http://www.kmae-journal.org c ONEMA, 2014 DOI: 10.1051/kmae/2014008 Bayesian hierarchical model used to analyze regression between fish body size and scale size: application to rare fish species Zingel asper B. Fontez(1),(2), L. Cavalli(3), Received May 24, 2013 Revised February 20, 2014 Accepted February 21, 2014 ABSTRACT Key-words: Back-calculation allows to increase available data on fish growth. The ac- hierarchical curacy of back-calculation models is of paramount importance for growth Bayes model, analysis. -
Morfološke Značajke, Taksonomski Položaj I Filogenetičkio Dnosi Populacija Endemskih Vrsta Roda Scardinius (Cypriniformes, Actinopterygii) U Jadranskom Slijevu
Morfološke značajke, taksonomski položaj i filogenetičkio dnosi populacija endemskih vrsta roda Scardinius (Cypriniformes, Actinopterygii) u Jadranskom slijevu Sabolić, Marija Doctoral thesis / Disertacija 2021 Degree Grantor / Ustanova koja je dodijelila akademski / stručni stupanj: University of Zagreb, Faculty of Science / Sveučilište u Zagrebu, Prirodoslovno-matematički fakultet Permanent link / Trajna poveznica: https://urn.nsk.hr/urn:nbn:hr:217:826670 Rights / Prava: In copyright Download date / Datum preuzimanja: 2021-10-06 Repository / Repozitorij: Repository of Faculty of Science - University of Zagreb PRIRODOSLOVNO-MATEMATIČKI FAKULTET BIOLOŠKI ODSJEK Marija Sabolić MORFOLOŠKE ZNAČAJKE, TAKSONOMSKI POLOŽAJ I FILOGENETIČKI ODNOSI POPULACIJA ENDEMSKIH VRSTA RODA SCARDINIUS (CYPRINIFORMES, ACTINOPTERYGII) U JADRANSKOM SLIJEVU DOKTORSKI RAD Zagreb, 2021. FACULTY OF SCIENCE DEPARTMENT OF BIOLOGY Marija Sabolić MORPHOLOGICAL CHARACTERISTICS, TAXONOMIC STATUS AND PHYLOGENETIC RELATIONSHIPS OF THE POPULATIONS OF THE ENDEMIC SCARDINIUS SPECIES (CYPRINIFORMES, ACTINOPTERYGII) IN THE ADRIATIC BASIN DOCTORAL THESIS Zagreb, 2021 „Ovaj je doktorski rad izrađen na Zoologijskom zavodu, pod vodstvom izv. prof. dr. sc. Marka Ćalete, u sklopu Sveučilišnog poslijediplomskog doktorskog studija Biologije pri Biološkom odsjeku Prirodoslovno-matematičkog fakulteta Sveučilišta u Zagrebu“. INFORMACIJE O MENTORU Izv. prof. dr. sc. Ćaleta, Marko Nakon završene I. zagrebačke gimnazije na Biološkom odsjeku PMF-a upisuje studij biologije. Diplomirao je 2000. i stječe zvanje diplomiranog inženjera biologije- ekologije. Poslijediplomski doktorski studij biologije završio je također na Biološkom odsjeku PMF-a, a doktorat znanosti iz znanstvenoga područja prirodnih znanosti, polje biologija, obranio je 2007. godine. Naslov doktorske disertacije glasio je "Ekološke značajke ihtiofaune nizinskog dijela rijeke Save". Od 2000. do 2012. godine zaposlen je u Zoologijskom zavodu Biološkog odsjeka kao mlađi asistent, asistent, viši asistent (poslijedoktorand) i naposljetku kao stručni savjetnik. -
Comparative Approach of Environmental Determinism of the Onset of the Reproductive Cycle of Five Temperate Freshwater Fish Imen Ben Ammar
Comparative approach of environmental determinism of the onset of the reproductive cycle of five temperate freshwater fish Imen Ben Ammar To cite this version: Imen Ben Ammar. Comparative approach of environmental determinism of the onset of the reproduc- tive cycle of five temperate freshwater fish. Animal biology. Université de Lorraine, 2014. English. NNT : 2014LORR0265. tel-01751294 HAL Id: tel-01751294 https://hal.univ-lorraine.fr/tel-01751294 Submitted on 29 Mar 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. AVERTISSEMENT Ce document est le fruit d'un long travail approuvé par le jury de soutenance et mis à disposition de l'ensemble de la communauté universitaire élargie. Il est soumis à la propriété intellectuelle de l'auteur. Ceci implique une obligation de citation et de référencement lors de l’utilisation de ce document. D'autre part, toute contrefaçon, plagiat, reproduction illicite encourt une poursuite pénale. Contact : [email protected] LIENS Code de la Propriété Intellectuelle. articles L 122. 4 Code de la -
BMC Evolutionary Biology Biomed Central
BMC Evolutionary Biology BioMed Central Research article Open Access Evolution of miniaturization and the phylogenetic position of Paedocypris, comprising the world's smallest vertebrate Lukas Rüber*1, Maurice Kottelat2, Heok Hui Tan3, Peter KL Ng3 and Ralf Britz1 Address: 1Department of Zoology, The Natural History Museum, Cromwell Road, London SW7 5BD, UK, 2Route de la Baroche 12, Case postale 57, CH-2952 Cornol, Switzerland (permanent address) and Raffles Museum of Biodiversity Research, National University of Singapore, Kent Ridge, Singapore 119260 and 3Department of Biological Sciences, National University of Singapore, Kent Ridge, Singapore 119260 Email: Lukas Rüber* - [email protected]; Maurice Kottelat - [email protected]; Heok Hui Tan - [email protected]; Peter KL Ng - [email protected]; Ralf Britz - [email protected] * Corresponding author Published: 13 March 2007 Received: 23 October 2006 Accepted: 13 March 2007 BMC Evolutionary Biology 2007, 7:38 doi:10.1186/1471-2148-7-38 This article is available from: http://www.biomedcentral.com/1471-2148/7/38 © 2007 Rüber et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: Paedocypris, a highly developmentally truncated fish from peat swamp forests in Southeast Asia, comprises the world's smallest vertebrate. Although clearly a cyprinid fish, a hypothesis about its phylogenetic position among the subfamilies of this largest teleost family, with over 2400 species, does not exist. -
Genetic Structure of Fragmented Populations of a Threatened Endemic Percid of the Rhoˆne River: Zingel Asper
Heredity (2004) 92, 329–334 & 2004 Nature Publishing Group All rights reserved 0018-067X/04 $25.00 www.nature.com/hdy Genetic structure of fragmented populations of a threatened endemic percid of the Rhoˆne river: Zingel asper J Laroche1,2 and JD Durand1,3 1Laboratoire d’Ecologie des Hydrosyste`mes Fluviaux, UMR CNRS 5023, Universite´ Claude Bernard, 43 bd du 11 Novembre 1918, 69622 Villeurbanne cedex, France; 2Laboratoire Ressources Halieutiques – Poissons Marins, Institut Universitaire Europe´en de la Mer, Place Nicolas Copernic, 29280, Plouzane´, France; 3IRD/Laboratoire Ge´nome, Populations, Interactions, UMR CNRS 5000, Universite´ Montpellier II, Station Me´diterrane´enne de l’Environnement Littoral 1, quai de la Daurade F-34200 Se`te, France Zingel asper is an endemic percid of the Rhoˆne basin equilibrium between mutation and drift. Thus, this population considered to be critically endangered. This species was shows an apparently better evolutionary potential for long- continuously distributed throughout the Rhoˆne in 1900, but term survival. Since 1930, a marked fragmentation of the today only occupies 17% of its initial area. In the present whole Rhoˆne system has appeared, related to the develop- study, five microsatellite loci were used to assess the level of ment of dams, and we assume that the significant genetic genetic variability within and among populations localized in differentiation detected between the populations could different sub-basins. Contrasting results were obtained for mainly reflect the impact of this fragmentation. -
Actualisation Des Connaissances Sur La Population D'aprons Du Rhône (Zingel Asper) Dans Le Doubs Franco-Suisse
Master Sciences de la Terre, de l'Eau et de l'Environnement Ingénierie des Hydrosystèmes et des Bassins Versants Parcours IMACOF Rapport de stage pour l'obtention de la 2ème année de Master Actualisation des connaissances sur la population d’aprons du Rhône (Zingel Asper) dans le Doubs franco-suisse - linéaire du futur Parc Naturel Régional transfrontalier - Propositions d’actions en faveur de l’espèce et de son milieu Florian BONNAIRE Septembre, 2012 Maître de stage : François BOINAY Organisme : Centre Nature Les Cerlatez Photo, 1ère de couverture : deux aprons vus le 13 août 2012 sur les gravières de Saint- Ursanne, dont le seul jeune individu observé au cours de cette campagne 2012. Photo prise par : Florian Bonnaire REMERCIEMENTS Nombreux sont ceux qui m’ont soutenu jusqu’à l’aboutissement de cette étude. Mes prochains remerciements iront donc à ces gens passionnants qui m’ont ouvert leurs portes et enrichi à leur manière cette belle aventure. Tout d’abord, mes remerciements vont à François Boinay, mon maître de stage mais aussi directeur du Centre Nature les Cerlatez. Merci pour m’avoir offert l’opportunité de faire ce stage passionnant au cœur des paysages grandioses de la vallée du Doubs franco-suisse. Merci pour ton aide précieuse mais aussi ton humour formidable que je n’oublierai pas. À Mickael Béjean, cet homme entièrement dévoué à l’apron sans qui cette étude n’aurait pas pris tout son sens. Merci pour tous ces conseils et partages d’expériences plus que bénéfiques, ainsi que pour ces quelques prospections nocturnes et subaquatiques. À Marianne Georget, animatrice du Plan National d’Action en faveur de l’apron du Rhône, pour m’avoir ouvert les portes des spécialistes, sans quoi le déroulement de ce stage n’aurait certainement pas pris cette dimension transfrontalière. -
Article New Localities of Scardinius Elmaliensis Bogutskaya, 1997 (Teleostei: Cyprinidae) and Its Phylogenetic Relationship Based on Mtdna Cytb Region Sequences
FishTaxa (2016) 1(3): 127-132 ISSN: 2458-942X Journal homepage: www.fishtaxa.com © 2016 FISHTAXA. All rights reserved Article New localities of Scardinius elmaliensis Bogutskaya, 1997 (Teleostei: Cyprinidae) and its phylogenetic relationship based on mtDNA Cytb region sequences Sevilay KARATAŞ1, Deniz İNNAL1, Sevil SUNGUR BİRECİKLİGİL*2, Ertan Mahir KORKMAZ3, Erdoğan ÇİÇEK2 1Department of Biology, Faculty of Art and Sciences, Mehmet Akif Ersoy University, Burdur, Turkey. 2Department of Biology, Faculty of Art and Sciences, Nevşehir Hacı Bektaş Veli University, Nevşehir, Turkey. 3Department of Molecular Biology and Genetics, Faculty of Science, Cumhuriyet University, Sivas, Turkey. Corresponding author: E-mail: [email protected] Abstract This study was conducted to report five new localities out of its type locality for Scardinius elmaliensis in the Western Mediterranean Basin of Turkey by providing their morphological characteristics, and their phylogenetic relationship based on mtDNA Cytb region. The results revealed significant differences of all studied populations in terms of the morphometric characters despite their low genetic differences, but their meristic characters were not different. All six studied populations of S. elmaliensis including that of type locality formed a monophyletic group with S. erythrophthalmus as sister group. The molecular result confirmed distinction of S. elmaliensis from S. erythrophthalmus based on Cytb genetic distance of 1.6-1.8%. The occurrence of S. elmaliensis out of type locality was firstly reported in this study. Such knowledge is important for future conservation strategies and habitat management of this species. Keywords: Turkey, Cytochorome b, Morphometry, Phylogenetic, Phenotypic plasticity. Zoobank: urn:lsid:zoobank.org:pub:309D8753-2816-488B-B795-852AF45F6396 Introduction The rudds, members of the family Cyprinidae, are found in Europe and the northern parts of Asia. -
Freshwater Fishes and Lampreys of Greece
HELLENIC CENTRE FOR MARINE RESEARCH Monographs on Marine Sciences No. 8 Freshwater Fishes and Lampreys of Greece An Annotated Checklist Barbieri R., Zogaris S., Kalogianni E., Stoumboudi M. Th, Chatzinikolaou Y., Giakoumi S., Kapakos Y., Kommatas D., Koutsikos N., Tachos, V., Vardakas L. & Economou A.N. 2015 Freshwater Fishes and Lampreys of Greece An Annotated Checklist HELLENIC CENTRE FOR MARINE RESEARCH Monographs on Marine Sciences No. 8 Freshwater Fishes and Lampreys of Greece An Annotated Checklist Barbieri R., Zogaris S., Kalogianni E., Stoumboudi M. Th, Chatzinikolaou Y., Giakoumi S., Kapakos Y., Kommatas D., Koutsikos N., Tachos, V., Vardakas L. & Economou A.N. 2015 Monographs on Marine Sciences 8 Authors: Barbieri R., Zogaris S., Kalogianni E., Stoumboudi M.Th., Chatzinikolaou Y., Giakoumi S., Kapakos Y., Kommatas D., Koutsikos N., Tachos V., Vardakas L. & Economou A.N. Fish drawings: R. Barbieri English text editing: S. Zogaris, E. Kalogianni, E. Green Design and production: Aris Vidalis Scientific reviewers: Jörg Freyhof, Dimitra Bobori Acknowledgements We would like to thank the following people for significant assistance in the field, for providing unpublished information, and/or support during the preparation of this work: Apostolos Apostolou, Nicolas Bailly, Bill Beaumont, Dimitra Bobori, Giorgos Catsadorakis, Charalambos Daoulas, Elias Dimitriou, Panayiotis Dimopoulos, Uwe Dussling, Panos S. Economidis, Jörg Freyhof, Zbigniew Kaczkowski, Nektarios Kalaitzakis, Stephanos Kavadas, Maurice Kottelat, Emmanuil Koutrakis, David Koutsogianopoulos, Marcello Kovačić, Ioannis Leonardos, Danilo Mrdak, Theodoros Naziridis, Elena Oikonomou, Kostas G. Papakonstatinou, Ioannis Paschos, Kostas Perdikaris, Olga Petriki, Radek Šanda, Nikolaos Skoulikidis, Manos Sperelakis, Kostas Tsigenopoulos, Maarten Vanhove, Haris Vavalidis, Jasna Vukić , Brian Zimmerman and the HCMR library staff (Anavissos Attiki). -
Annex 1: Field Protocol
Annex 1: Field protocol Annex 1-Table 1: Fish data Fish data Date (dd/mm/yyyy) Site code Sampling method Site name Sampling location Name of watercourse Main river region XY co-ordinates GPS co-ordinates Longitude Transect length [m] Latitude Fished area [m2] Altitude[m] Wetted width [m] Fish data Fish species number of specimen number of specimen length ≤150 mm length >150 mm 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 Annex 1-Table 2: Abiotic and method data Reference fields Site code Date dd/mm/yyyy Site name Name of watercourse or River name River region XY co-ordinates or longitude, latitude GPS co-ordinates Altitude m Sampling location Main channel/Backwaters/Mixed Sampling method Boat/Wading Fished area m2 Wetted width m Abiotic variables Altitude m Lakes upstream affecting Yes / No the site Distance from source km Flow regime Permanent / Summer dry/Winter dry/Intermittent Geomophology Naturally constrained no modification/ Braided/Sinuous/Meand regular/Meand tortuous Former floodplain No/Small/Medium/Large/Some waterbodies remaining/ Water source type Glacial/Nival/Pluvial/Groundwater Former sediment size Organic/Silt/Sand/ Gravel-Pebble-Cobble/Boulder-Rock Upstream drainage area km2 Distance from source km River slope m/km (‰) Mean air temperature Celsius (°C) Annex 1-Table 3: Human impact data (optional) Site code hChemical data Name watercourse Oxygen (mg/l or % saturation) XYZ co-ordinates or X:……………………(N) Conductivity (mS/cm) longitude latitude altitude Y:……………………(E) Z :…………………….m -
Deliverable D5.D: Report on the Position of Exotic Species in the Context of Estuaries, Rivers and Lakes Multi-Stressors and Regarding Ecosystem Services
Deliverable D5.D – Exotic species in multi-stressor context Funded by the European Union within the 7th Framework Programme, Grant Agreement 603378. Duration: February 1st, 2014 – January 31th, 2018 Deliverable D5.D: Report on the position of exotic species in the context of estuaries, rivers and lakes multi-stressors and regarding ecosystem services Lead contractor: Irstea Contributors: Maxime Logez, Benjamin Agaciak, Christine Argillier, Mario Lepage, Nils Teichert (Irstea), Rafaela Schinegger, Stefan Schmutz (BOKU), Pedro Segurado, Maria Teresa Ferreira (ULisboa), Guillem Chust, Ainhize Uriarte, Angel Borja (AZTI) Due date of deliverable: Month 33 Actual submission date: Month 37 Dissemination Level PU Public X PP Restricted to other programme participants (including the Commission Services) RE Restricted to a group specified by the consortium (including the Commission Services) CO Confidential, only for members of the consortium (including the Commission Services) Page 1/51 Deliverable D5.D – Exotic species in multi-stressor context Content Non-technical summary ............................................................................................................. 3 Introduction ................................................................................................................................ 5 Methods ...................................................................................................................................... 7 Available data ........................................................................................................................